View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13281_low_12 (Length: 330)
Name: NF13281_low_12
Description: NF13281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13281_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 7 - 307
Target Start/End: Complemental strand, 24357270 - 24356970
Alignment:
| Q |
7 |
gagagaagaacaaagtaaccctgcaaattaaacaaggtcaaaatcagtatgcttaaaattaaattcatgatatcaagcaagttcttatcttcacacaaaa |
106 |
Q |
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| T |
24357270 |
gagagaagaacaaagtaaccctgcaaattaaacaaggtcaaaatcagtatgcttaaaattaaattcatgatatcaagcaagttcttatcttcactcaaaa |
24357171 |
T |
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| Q |
107 |
gcaaataaaactcacccaattgttagttgcattggcaaatattatagcccatgatggcaattttgataaaataaggcctataggaggaagcttgttactc |
206 |
Q |
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| T |
24357170 |
gcaaataaaactcacccaattgttagttgcattggcaaatattatagcccatgatggcaattttgataaaataaggcctataggaggaagcttgttactc |
24357071 |
T |
|
| Q |
207 |
ttctttggagaagcagtttttccagcttggatcaatcttagttctgatctgctgatgaaattgctttccgaaggatcatctgtaacttgatacgaccatg |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24357070 |
ttctttggagaagcagtttttccagcttggatcaatcttagttctgatctgttgataaaattgctttccgaaggatcatctgtaacttgatacgaccatg |
24356971 |
T |
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| Q |
307 |
t |
307 |
Q |
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| T |
24356970 |
t |
24356970 |
T |
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