View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13281_low_23 (Length: 221)
Name: NF13281_low_23
Description: NF13281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13281_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 44282621 - 44282798
Alignment:
| Q |
22 |
cattacagagcataatcctactctcaacaggcacaaataaaggtggagggtactttgctccaaaatggctattcttatgtatgtacattggcctcactgt |
121 |
Q |
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| T |
44282621 |
cattacagagcataatcctactctcaacaggcacaaataaaggtggagggtactttgctccaaaatggctattcttatgtatgtacattggcctcactgt |
44282720 |
T |
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| Q |
122 |
tatatgggcagcattgaacacatttgcattagaagtcattgccttcatcgatataatttcaatatggtggcaggtact |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44282721 |
tatatgggcagcattgaacacatttgcattagaagtcattgccttcatcgatataatttcaatatggtggcaggtact |
44282798 |
T |
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