View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13282_high_13 (Length: 376)
Name: NF13282_high_13
Description: NF13282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13282_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 366
Target Start/End: Original strand, 37569701 - 37570059
Alignment:
| Q |
16 |
aattcaaacgagcataataacttatacctacaacctcgtattgagcttagaataacttatacctacaatctcatattgagcttaannnnnnnngtagaag |
115 |
Q |
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| T |
37569701 |
aattcaaacgagcatgataacttatatctacaacctcgtattgagcttagaataacttatacctacaatctcgtattgagcttagatttttttgtagaag |
37569800 |
T |
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| Q |
116 |
ggcttatatttgacaagttttgtcacataattagtggtcaaaagttatacttttgtccgaaaatattaatctatccgaaaaagaaatt---ttttatttg |
212 |
Q |
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| T |
37569801 |
agcttatatttgacaagttttgtcacataactagtggtgaaaagttatacttttgtccgaaaatattaatctatgcgaaaaagaaattatcttttatttg |
37569900 |
T |
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| Q |
213 |
tacttttaaataaatttgatggtttttgttg----nnnnnnnggtaattttgttgttgagagaactcccataaattatcattgatgaaaataaaattaag |
308 |
Q |
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| T |
37569901 |
tacttttaaataattttgatggtttttgttgaaaaaaaaaaaggtcattttgttgttgggagaactcccataaattatcattgatgaaaataaaattaag |
37570000 |
T |
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| Q |
309 |
gtttaaatgcatttctaat-cctttattttacctttgttttaattttgcgcctcttcat |
366 |
Q |
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| T |
37570001 |
gcttaaatgcatttctaatccctttattttacctttgtttaaattttgcgccccttcat |
37570059 |
T |
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