View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13282_low_21 (Length: 270)
Name: NF13282_low_21
Description: NF13282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13282_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 1174426 - 1174669
Alignment:
| Q |
9 |
caagaaaatcgcagatacggccaaaaacactcgaaaaggcttcatacctcaggaatgataaattttccagtaagcaagcaaacagcaggaagagtacaat |
108 |
Q |
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| T |
1174426 |
caagaaaatcgcagatacggccaaaaacactcgaaaaggcttcatacctcaggaatgataaattttccagtaagcaagcaaacagcaggaagagtacaat |
1174525 |
T |
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| Q |
109 |
atgcaaccaaaggtattgatgtccatggatatacaatagcatttatgtaagaaattctttctaaccactttaatcctcctttatatccataccaaatagg |
208 |
Q |
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| T |
1174526 |
atgcaaccaaaggtattgatgtccatggatatacaatagcatttatgtaagaaattctttctaaccactttaatcctcctttatatccataccaaatagg |
1174625 |
T |
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| Q |
209 |
acaatgtttactcatgaatatgtcaatggatccaagggcccatt |
252 |
Q |
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| T |
1174626 |
acaatgtttactcatgaatatgtcaatggatccaagggcccatt |
1174669 |
T |
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