View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13283_low_2 (Length: 393)

Name: NF13283_low_2
Description: NF13283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13283_low_2
NF13283_low_2
[»] chr2 (43 HSPs)
chr2 (1-387)||(14906278-14906664)
chr2 (1-387)||(23820110-23820496)
chr2 (1-387)||(20015050-20015436)
chr2 (26-387)||(19689239-19689600)
chr2 (93-386)||(17396492-17396784)
chr2 (53-386)||(25265227-25265563)
chr2 (94-312)||(7507756-7507975)
chr2 (59-347)||(36982328-36982608)
chr2 (94-353)||(462870-463117)
chr2 (93-226)||(19794703-19794836)
chr2 (93-225)||(20627313-20627445)
chr2 (93-346)||(8891373-8891616)
chr2 (93-224)||(24341390-24341521)
chr2 (129-224)||(43642958-43643053)
chr2 (255-387)||(12641483-12641615)
chr2 (128-387)||(12728559-12728807)
chr2 (128-387)||(34824642-34824890)
chr2 (277-387)||(12635709-12635819)
chr2 (274-387)||(23774438-23774551)
chr2 (255-387)||(8944129-8944261)
chr2 (277-387)||(3798444-3798554)
chr2 (279-353)||(9652754-9652828)
chr2 (93-213)||(19886661-19886781)
chr2 (279-353)||(22863235-22863309)
chr2 (243-354)||(33128335-33128447)
chr2 (279-387)||(21273872-21273980)
chr2 (255-322)||(16935876-16935943)
chr2 (255-322)||(17006536-17006603)
chr2 (257-353)||(24341267-24341365)
chr2 (255-322)||(42177875-42177942)
chr2 (280-353)||(32466177-32466249)
chr2 (279-311)||(22284278-22284310)
chr2 (255-310)||(11231256-11231311)
chr2 (255-310)||(22513103-22513158)
chr2 (255-310)||(24685699-24685754)
chr2 (279-310)||(25213372-25213403)
chr2 (278-345)||(28031100-28031167)
chr2 (255-310)||(28775725-28775780)
chr2 (129-209)||(24884852-24884933)
chr2 (129-208)||(68158-68238)
chr2 (279-311)||(19794629-19794661)
chr2 (279-311)||(20627238-20627270)
chr2 (279-311)||(22275045-22275077)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-387)||(22579-22965)
scaffold0141 (1-387)||(26834-27220)
[»] chr3 (65 HSPs)
chr3 (1-387)||(2449077-2449462)
chr3 (78-387)||(13954728-13955036)
chr3 (93-387)||(45860937-45861230)
chr3 (59-353)||(17912356-17912648)
chr3 (93-293)||(13975654-13975853)
chr3 (59-225)||(16744115-16744281)
chr3 (101-387)||(15614973-15615245)
chr3 (93-225)||(51158018-51158150)
chr3 (93-322)||(14842476-14842693)
chr3 (93-226)||(15859023-15859156)
chr3 (128-387)||(11986003-11986263)
chr3 (93-225)||(12030147-12030279)
chr3 (93-219)||(15936633-15936759)
chr3 (93-225)||(2049941-2050073)
chr3 (93-221)||(13839025-13839153)
chr3 (93-219)||(15938475-15938601)
chr3 (198-387)||(8268573-8268763)
chr3 (198-387)||(8275673-8275863)
chr3 (129-387)||(54651625-54651873)
chr3 (93-213)||(55316351-55316471)
chr3 (279-353)||(38168237-38168311)
chr3 (279-356)||(2050115-2050192)
chr3 (78-191)||(16821256-16821369)
chr3 (93-213)||(41270207-41270327)
chr3 (163-226)||(19231982-19232045)
chr3 (279-353)||(33342204-33342278)
chr3 (279-387)||(53771365-53771474)
chr3 (279-386)||(23492696-23492803)
chr3 (279-387)||(16261777-16261886)
chr3 (279-347)||(19260713-19260781)
chr3 (1-72)||(16744436-16744507)
chr3 (279-353)||(12030031-12030105)
chr3 (279-353)||(13839200-13839274)
chr3 (155-209)||(14080701-14080756)
chr3 (279-322)||(30153265-30153308)
chr3 (279-353)||(14285289-14285363)
chr3 (279-353)||(54685159-54685233)
chr3 (279-344)||(28558494-28558559)
chr3 (255-322)||(5228595-5228662)
chr3 (255-322)||(18911276-18911343)
chr3 (279-354)||(19947026-19947101)
chr3 (179-225)||(19260823-19260869)
chr3 (279-345)||(51960997-51961063)
chr3 (279-312)||(16933868-16933901)
chr3 (128-310)||(49232603-49232774)
chr3 (279-311)||(17955884-17955916)
chr3 (255-310)||(1467657-1467712)
chr3 (128-219)||(12264790-12264881)
chr3 (128-312)||(12902006-12902179)
chr3 (128-219)||(15468338-15468429)
chr3 (128-219)||(25058906-25058997)
chr3 (256-310)||(12812125-12812179)
chr3 (255-352)||(12264668-12264765)
chr3 (277-322)||(15468246-15468291)
chr3 (277-322)||(18896950-18896995)
chr3 (279-311)||(2844514-2844546)
chr3 (279-311)||(3992873-3992905)
chr3 (129-209)||(4145814-4145894)
chr3 (279-311)||(15857163-15857195)
chr3 (11-86)||(18969968-18970044)
chr3 (279-311)||(19232089-19232121)
chr3 (278-322)||(25059045-25059089)
chr3 (129-208)||(47784767-47784847)
chr3 (279-311)||(54038024-54038056)
chr3 (279-311)||(55513193-55513225)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-387)||(1421-1806)
[»] chr8 (50 HSPs)
chr8 (1-387)||(5238126-5238512)
chr8 (1-387)||(24661086-24661472)
chr8 (1-387)||(43685585-43685971)
chr8 (59-387)||(22907052-22907380)
chr8 (93-387)||(17345700-17345995)
chr8 (93-225)||(16193716-16193848)
chr8 (93-353)||(43373350-43373600)
chr8 (93-225)||(24928791-24928923)
chr8 (129-225)||(16404975-16405071)
chr8 (93-213)||(6774258-6774378)
chr8 (93-209)||(21844576-21844692)
chr8 (93-213)||(24549113-24549233)
chr8 (93-209)||(21851969-21852085)
chr8 (255-387)||(16872892-16873024)
chr8 (93-213)||(30120854-30120974)
chr8 (279-353)||(24385610-24385684)
chr8 (93-213)||(16674392-16674512)
chr8 (1-72)||(22907535-22907606)
chr8 (279-353)||(24928674-24928748)
chr8 (279-347)||(41506673-41506741)
chr8 (278-353)||(21494314-21494389)
chr8 (279-353)||(16193601-16193674)
chr8 (280-353)||(7000478-7000551)
chr8 (198-312)||(2545183-2545298)
chr8 (255-322)||(13662171-13662238)
chr8 (255-322)||(13720834-13720901)
chr8 (279-353)||(22886654-22886728)
chr8 (128-322)||(22006164-22006347)
chr8 (129-209)||(26011660-26011741)
chr8 (279-311)||(24716762-24716794)
chr8 (255-310)||(271278-271333)
chr8 (255-310)||(644587-644642)
chr8 (255-310)||(830322-830377)
chr8 (243-353)||(3431134-3431245)
chr8 (255-310)||(15319077-15319132)
chr8 (255-310)||(15499446-15499501)
chr8 (128-219)||(16195398-16195489)
chr8 (155-209)||(23226076-23226131)
chr8 (198-248)||(18612643-18612693)
chr8 (198-248)||(22147675-22147725)
chr8 (277-322)||(16674296-16674341)
chr8 (168-209)||(23149985-23150026)
chr8 (78-150)||(222754-222826)
chr8 (279-311)||(274766-274798)
chr8 (279-311)||(641051-641083)
chr8 (78-150)||(736377-736449)
chr8 (279-311)||(826857-826889)
chr8 (78-150)||(860272-860344)
chr8 (129-208)||(17285370-17285450)
chr8 (277-313)||(24549283-24549319)
[»] chr7 (50 HSPs)
chr7 (1-387)||(15441402-15441788)
chr7 (1-387)||(30261967-30262353)
chr7 (1-387)||(11516266-11516651)
chr7 (59-387)||(7293113-7293441)
chr7 (93-386)||(25292178-25292470)
chr7 (183-386)||(14113828-14114031)
chr7 (183-386)||(14423479-14423681)
chr7 (128-387)||(13321182-13321443)
chr7 (94-345)||(47480910-47481162)
chr7 (93-353)||(16211897-16212145)
chr7 (93-353)||(11580619-11580871)
chr7 (93-353)||(36052795-36053045)
chr7 (93-353)||(13036896-13037146)
chr7 (93-219)||(18253841-18253967)
chr7 (97-225)||(3060101-3060229)
chr7 (93-207)||(16478968-16479082)
chr7 (93-209)||(13572808-13572924)
chr7 (255-387)||(13758653-13758785)
chr7 (93-213)||(10989541-10989661)
chr7 (94-219)||(2437590-2437715)
chr7 (101-213)||(13911024-13911136)
chr7 (279-353)||(2029244-2029318)
chr7 (279-353)||(42056146-42056220)
chr7 (97-226)||(295965-296094)
chr7 (279-347)||(3049905-3049973)
chr7 (1-72)||(7292887-7292958)
chr7 (279-353)||(25124450-25124524)
chr7 (279-387)||(2190008-2190117)
chr7 (128-322)||(18979927-18980110)
chr7 (255-322)||(15760020-15760087)
chr7 (255-322)||(15927851-15927918)
chr7 (129-219)||(48622664-48622754)
chr7 (255-320)||(14250806-14250871)
chr7 (128-322)||(15950697-15950880)
chr7 (129-209)||(16914928-16915009)
chr7 (255-310)||(7823011-7823066)
chr7 (255-310)||(7830322-7830377)
chr7 (255-310)||(27101555-27101610)
chr7 (255-310)||(27108903-27108958)
chr7 (255-310)||(27176716-27176771)
chr7 (255-310)||(38783647-38783702)
chr7 (243-312)||(371380-371450)
chr7 (129-209)||(9611474-9611555)
chr7 (129-209)||(9839045-9839126)
chr7 (280-353)||(10000245-10000318)
chr7 (277-322)||(13572979-13573024)
chr7 (279-311)||(126738-126770)
chr7 (129-208)||(13377695-13377775)
chr7 (279-307)||(15516765-15516793)
chr7 (279-311)||(32493946-32493978)
[»] chr5 (54 HSPs)
chr5 (1-387)||(16536236-16536622)
chr5 (1-387)||(20623008-20623394)
chr5 (1-387)||(21233366-21233752)
chr5 (1-387)||(37052783-37053169)
chr5 (1-387)||(25900244-25900629)
chr5 (93-312)||(34939408-34939628)
chr5 (93-225)||(23507096-23507228)
chr5 (94-224)||(18531068-18531198)
chr5 (128-387)||(32950861-32951121)
chr5 (93-224)||(22053834-22053965)
chr5 (93-353)||(27182429-27182679)
chr5 (93-213)||(29188284-29188404)
chr5 (255-387)||(1219361-1219493)
chr5 (95-209)||(27009975-27010089)
chr5 (280-387)||(23328865-23328972)
chr5 (280-387)||(24616469-24616576)
chr5 (280-387)||(24712845-24712952)
chr5 (280-387)||(24745863-24745970)
chr5 (78-213)||(22366481-22366616)
chr5 (93-210)||(43443398-43443515)
chr5 (78-210)||(18777995-18778127)
chr5 (93-213)||(19500031-19500151)
chr5 (93-213)||(25426760-25426880)
chr5 (78-213)||(4199985-4200120)
chr5 (93-213)||(12506-12626)
chr5 (93-213)||(21073595-21073715)
chr5 (279-353)||(23981363-23981437)
chr5 (279-353)||(21651018-21651092)
chr5 (128-386)||(23514728-23514975)
chr5 (281-353)||(2032135-2032207)
chr5 (255-387)||(35790939-35791071)
chr5 (243-345)||(108694-108797)
chr5 (279-322)||(16105967-16106010)
chr5 (279-322)||(23507270-23507313)
chr5 (279-352)||(25005137-25005210)
chr5 (279-347)||(7529228-7529296)
chr5 (255-322)||(7425607-7425674)
chr5 (198-345)||(17909742-17909889)
chr5 (255-310)||(36989688-36989743)
chr5 (279-353)||(21205249-21205322)
chr5 (279-352)||(11343008-11343081)
chr5 (129-209)||(21310709-21310790)
chr5 (129-209)||(29918131-29918212)
chr5 (281-353)||(18530946-18531018)
chr5 (128-219)||(10777968-10778059)
chr5 (255-310)||(11211983-11212038)
chr5 (255-310)||(21932299-21932354)
chr5 (255-310)||(21938469-21938524)
chr5 (279-314)||(22053750-22053785)
chr5 (255-310)||(35582319-35582374)
chr5 (243-312)||(9730277-9730347)
chr5 (129-209)||(19862375-19862456)
chr5 (168-209)||(23981516-23981557)
chr5 (277-322)||(27010144-27010189)
[»] chr4 (51 HSPs)
chr4 (16-387)||(16327764-16328135)
chr4 (1-387)||(10488601-10488987)
chr4 (59-387)||(26680297-26680625)
chr4 (78-387)||(13048059-13048368)
chr4 (250-387)||(16608937-16609074)
chr4 (93-225)||(122020-122152)
chr4 (93-224)||(15675090-15675221)
chr4 (93-224)||(10104251-10104382)
chr4 (93-353)||(13246561-13246811)
chr4 (129-226)||(54118243-54118340)
chr4 (255-387)||(20001006-20001138)
chr4 (97-198)||(31115764-31115865)
chr4 (152-224)||(33240890-33240962)
chr4 (78-209)||(10644336-10644467)
chr4 (280-387)||(26339327-26339434)
chr4 (78-213)||(47357771-47357906)
chr4 (279-387)||(15135830-15135939)
chr4 (279-387)||(15272134-15272243)
chr4 (1-72)||(26680071-26680142)
chr4 (129-209)||(40885570-40885650)
chr4 (280-353)||(55376452-55376525)
chr4 (279-347)||(122194-122262)
chr4 (198-312)||(9795453-9795566)
chr4 (279-322)||(14952085-14952128)
chr4 (255-322)||(17145563-17145630)
chr4 (278-353)||(32460561-32460636)
chr4 (198-386)||(14996364-14996552)
chr4 (255-322)||(7131971-7132038)
chr4 (255-322)||(15287151-15287218)
chr4 (255-322)||(15294260-15294327)
chr4 (257-353)||(15674967-15675065)
chr4 (198-312)||(19697277-19697391)
chr4 (198-312)||(19707862-19707976)
chr4 (278-352)||(40885418-40885492)
chr4 (93-226)||(7850131-7850264)
chr4 (273-314)||(7850308-7850349)
chr4 (279-347)||(14500076-14500144)
chr4 (257-314)||(33240987-33241046)
chr4 (243-353)||(8045235-8045346)
chr4 (279-314)||(10104167-10104202)
chr4 (128-219)||(18169137-18169228)
chr4 (193-224)||(31132545-31132576)
chr4 (243-312)||(16523109-16523179)
chr4 (280-322)||(22351970-22352012)
chr4 (255-353)||(22738552-22738650)
chr4 (281-322)||(18248527-18248568)
chr4 (277-322)||(47357956-47358001)
chr4 (168-208)||(13809511-13809551)
chr4 (129-208)||(15044994-15045074)
chr4 (282-314)||(31132628-31132660)
chr4 (279-311)||(54118168-54118200)
[»] chr1 (29 HSPs)
chr1 (1-387)||(51452531-51452916)
chr1 (93-387)||(45051554-45051834)
chr1 (93-387)||(2116386-2116666)
chr1 (78-225)||(20931461-20931608)
chr1 (93-223)||(20913161-20913291)
chr1 (93-225)||(41394353-41394485)
chr1 (129-353)||(37844332-37844546)
chr1 (129-345)||(20445846-20446053)
chr1 (93-226)||(20893625-20893758)
chr1 (129-226)||(20531611-20531708)
chr1 (280-387)||(7640775-7640882)
chr1 (94-219)||(22227941-22228066)
chr1 (94-219)||(22232638-22232763)
chr1 (275-387)||(46523691-46523803)
chr1 (280-387)||(22035755-22035862)
chr1 (93-213)||(5072388-5072508)
chr1 (93-213)||(18601118-18601238)
chr1 (279-353)||(20893509-20893583)
chr1 (279-353)||(20913335-20913409)
chr1 (279-347)||(20931650-20931718)
chr1 (279-345)||(20531751-20531817)
chr1 (279-311)||(41394527-41394559)
chr1 (279-310)||(15861327-15861358)
chr1 (255-310)||(17004921-17004976)
chr1 (255-310)||(19962417-19962472)
chr1 (168-209)||(22143361-22143402)
chr1 (265-310)||(38055009-38055054)
chr1 (279-311)||(21860334-21860366)
chr1 (279-311)||(44034871-44034903)
[»] scaffold0078 (2 HSPs)
scaffold0078 (63-387)||(36904-37228)
scaffold0078 (17-68)||(37391-37442)
[»] scaffold0772 (1 HSPs)
scaffold0772 (93-387)||(5660-5953)
[»] scaffold0132 (1 HSPs)
scaffold0132 (53-345)||(13596-13890)
[»] chr6 (42 HSPs)
chr6 (53-347)||(35009316-35009612)
chr6 (93-322)||(1657650-1657880)
chr6 (93-387)||(1649945-1650225)
chr6 (93-322)||(15862602-15862832)
chr6 (142-353)||(27751605-27751816)
chr6 (93-353)||(23153578-23153828)
chr6 (94-225)||(14626118-14626249)
chr6 (128-387)||(29666040-29666290)
chr6 (255-387)||(23978052-23978184)
chr6 (78-213)||(25175680-25175815)
chr6 (78-213)||(27653983-27654118)
chr6 (279-387)||(23995247-23995356)
chr6 (88-213)||(16825752-16825879)
chr6 (198-353)||(16299844-16299999)
chr6 (279-353)||(23148303-23148377)
chr6 (281-354)||(15742077-15742150)
chr6 (277-387)||(19610323-19610433)
chr6 (279-353)||(32276617-32276691)
chr6 (128-322)||(1556172-1556355)
chr6 (128-322)||(16232059-16232242)
chr6 (279-354)||(18002352-18002427)
chr6 (129-209)||(18629608-18629689)
chr6 (243-347)||(18839102-18839207)
chr6 (279-312)||(26090059-26090092)
chr6 (129-209)||(29605616-29605696)
chr6 (279-310)||(4991396-4991427)
chr6 (255-310)||(10488982-10489037)
chr6 (255-310)||(16376291-16376346)
chr6 (255-310)||(16383615-16383670)
chr6 (255-310)||(16556057-16556112)
chr6 (255-310)||(16632613-16632668)
chr6 (155-209)||(16887792-16887847)
chr6 (136-207)||(17083200-17083271)
chr6 (243-353)||(18823241-18823352)
chr6 (255-310)||(19299520-19299575)
chr6 (155-209)||(35136013-35136068)
chr6 (198-248)||(19629567-19629617)
chr6 (255-312)||(13620710-13620767)
chr6 (168-209)||(33324898-33324939)
chr6 (279-311)||(19983192-19983224)
chr6 (280-320)||(29869684-29869724)
chr6 (279-311)||(35015057-35015089)
[»] scaffold0125 (1 HSPs)
scaffold0125 (53-353)||(41738-42039)
[»] scaffold0162 (3 HSPs)
scaffold0162 (93-352)||(8051-8312)
scaffold0162 (95-353)||(26298-26545)
scaffold0162 (205-375)||(11989-12160)
[»] scaffold0075 (1 HSPs)
scaffold0075 (129-312)||(34372-34556)
[»] scaffold0266 (3 HSPs)
scaffold0266 (93-225)||(1255-1387)
scaffold0266 (93-353)||(3466-3714)
scaffold0266 (279-353)||(1430-1504)
[»] scaffold0175 (2 HSPs)
scaffold0175 (78-225)||(956-1103)
scaffold0175 (274-322)||(871-919)
[»] scaffold0049 (1 HSPs)
scaffold0049 (93-312)||(48318-48537)
[»] scaffold0195 (2 HSPs)
scaffold0195 (93-226)||(19337-19470)
scaffold0195 (93-225)||(21421-21553)
[»] scaffold0302 (2 HSPs)
scaffold0302 (78-225)||(12229-12376)
scaffold0302 (279-353)||(12418-12492)
[»] scaffold0413 (2 HSPs)
scaffold0413 (93-225)||(6064-6196)
scaffold0413 (274-314)||(5987-6027)
[»] scaffold0077 (2 HSPs)
scaffold0077 (78-226)||(36912-37060)
scaffold0077 (279-340)||(36808-36869)
[»] scaffold0023 (5 HSPs)
scaffold0023 (93-225)||(48729-48861)
scaffold0023 (78-191)||(36210-36323)
scaffold0023 (255-322)||(153913-153980)
scaffold0023 (279-312)||(48903-48936)
scaffold0023 (243-312)||(61121-61191)
[»] scaffold0018 (2 HSPs)
scaffold0018 (93-225)||(51182-51314)
scaffold0018 (279-353)||(51066-51140)
[»] scaffold0025 (3 HSPs)
scaffold0025 (93-224)||(8980-9111)
scaffold0025 (93-222)||(148852-148981)
scaffold0025 (279-353)||(146906-146980)
[»] scaffold1542 (1 HSPs)
scaffold1542 (129-226)||(533-630)
[»] scaffold0011 (2 HSPs)
scaffold0011 (93-226)||(123163-123296)
scaffold0011 (279-353)||(123045-123119)
[»] scaffold0012 (2 HSPs)
scaffold0012 (93-353)||(247324-247574)
scaffold0012 (235-353)||(34033-34150)
[»] scaffold0008 (2 HSPs)
scaffold0008 (129-345)||(128061-128265)
scaffold0008 (101-191)||(31697-31787)
[»] scaffold0218 (1 HSPs)
scaffold0218 (93-226)||(5060-5193)
[»] scaffold0028 (6 HSPs)
scaffold0028 (129-226)||(89453-89550)
scaffold0028 (174-226)||(107783-107835)
scaffold0028 (279-345)||(89344-89410)
scaffold0028 (279-345)||(107674-107740)
scaffold0028 (155-209)||(79731-79786)
scaffold0028 (279-310)||(130880-130911)
[»] scaffold0106 (2 HSPs)
scaffold0106 (93-225)||(41860-41992)
scaffold0106 (279-345)||(42034-42100)
[»] scaffold0361 (1 HSPs)
scaffold0361 (132-353)||(3360-3578)
[»] scaffold0001 (4 HSPs)
scaffold0001 (78-225)||(172021-172168)
scaffold0001 (78-225)||(177724-177871)
scaffold0001 (279-353)||(172210-172284)
scaffold0001 (279-353)||(177913-177987)
[»] scaffold0498 (1 HSPs)
scaffold0498 (93-353)||(9009-9257)
[»] scaffold0026 (4 HSPs)
scaffold0026 (93-219)||(107878-108004)
scaffold0026 (93-209)||(64527-64648)
scaffold0026 (168-210)||(89863-89905)
scaffold0026 (277-322)||(64427-64472)
[»] scaffold0084 (1 HSPs)
scaffold0084 (128-387)||(55936-56196)
[»] scaffold0420 (1 HSPs)
scaffold0420 (93-213)||(13325-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (93-209)||(167-283)
scaffold0116 (277-387)||(336-446)
[»] scaffold0529 (1 HSPs)
scaffold0529 (93-219)||(3094-3220)
[»] scaffold0215 (4 HSPs)
scaffold0215 (93-191)||(9371-9469)
scaffold0215 (93-191)||(16269-16367)
scaffold0215 (277-353)||(9223-9299)
scaffold0215 (277-353)||(16121-16197)
[»] scaffold0076 (2 HSPs)
scaffold0076 (78-190)||(43114-43226)
scaffold0076 (255-310)||(39386-39441)
[»] scaffold0009 (2 HSPs)
scaffold0009 (78-225)||(272141-272288)
scaffold0009 (279-347)||(272330-272398)
[»] scaffold0022 (2 HSPs)
scaffold0022 (94-175)||(5254-5335)
scaffold0022 (168-208)||(102923-102963)
[»] scaffold1711 (1 HSPs)
scaffold1711 (93-213)||(1304-1424)
[»] scaffold0597 (1 HSPs)
scaffold0597 (279-353)||(836-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (279-353)||(9840-9914)
[»] scaffold0139 (2 HSPs)
scaffold0139 (93-191)||(14083-14181)
scaffold0139 (96-219)||(21110-21233)
[»] scaffold0467 (1 HSPs)
scaffold0467 (128-347)||(10220-10428)
[»] scaffold0251 (1 HSPs)
scaffold0251 (279-387)||(13208-13317)
[»] scaffold0066 (3 HSPs)
scaffold0066 (128-353)||(45197-45412)
scaffold0066 (256-353)||(54701-54798)
scaffold0066 (128-175)||(54583-54630)
[»] scaffold0369 (1 HSPs)
scaffold0369 (94-175)||(3854-3936)
[»] scaffold0234 (1 HSPs)
scaffold0234 (279-353)||(17262-17336)
[»] scaffold0032 (5 HSPs)
scaffold0032 (279-353)||(55904-55978)
scaffold0032 (279-353)||(108033-108107)
scaffold0032 (198-312)||(13266-13379)
scaffold0032 (168-209)||(93773-93814)
scaffold0032 (142-209)||(104623-104691)
[»] scaffold0004 (1 HSPs)
scaffold0004 (279-353)||(193355-193429)
[»] scaffold0160 (1 HSPs)
scaffold0160 (280-353)||(339-412)
[»] scaffold0158 (1 HSPs)
scaffold0158 (280-353)||(25532-25605)
[»] scaffold0058 (2 HSPs)
scaffold0058 (279-387)||(57315-57424)
scaffold0058 (156-209)||(70307-70361)
[»] scaffold0761 (1 HSPs)
scaffold0761 (255-386)||(1417-1548)
[»] scaffold0706 (1 HSPs)
scaffold0706 (279-353)||(6401-6475)
[»] scaffold0118 (1 HSPs)
scaffold0118 (279-353)||(34266-34340)
[»] scaffold0037 (1 HSPs)
scaffold0037 (278-354)||(95297-95373)
[»] scaffold0207 (1 HSPs)
scaffold0207 (279-345)||(18026-18092)
[»] scaffold0039 (1 HSPs)
scaffold0039 (279-353)||(12376-12450)
[»] scaffold0029 (1 HSPs)
scaffold0029 (207-353)||(49710-49856)
[»] scaffold0123 (1 HSPs)
scaffold0123 (129-209)||(8176-8257)
[»] scaffold1500 (1 HSPs)
scaffold1500 (255-322)||(1420-1487)
[»] scaffold0173 (1 HSPs)
scaffold0173 (278-353)||(5548-5623)
[»] scaffold0335 (1 HSPs)
scaffold0335 (279-353)||(5434-5508)
[»] scaffold0456 (2 HSPs)
scaffold0456 (168-209)||(1546-1587)
scaffold0456 (168-209)||(8691-8732)
[»] scaffold0383 (1 HSPs)
scaffold0383 (277-322)||(2698-2743)
[»] scaffold0034 (1 HSPs)
scaffold0034 (279-311)||(80187-80219)
[»] scaffold0409 (2 HSPs)
scaffold0409 (131-209)||(1348-1427)
scaffold0409 (131-209)||(9603-9682)
[»] scaffold0367 (1 HSPs)
scaffold0367 (243-313)||(17207-17278)
[»] scaffold0303 (1 HSPs)
scaffold0303 (279-354)||(4303-4378)
[»] scaffold0213 (1 HSPs)
scaffold0213 (255-310)||(29445-29500)
[»] scaffold0191 (1 HSPs)
scaffold0191 (275-322)||(7362-7409)
[»] scaffold0107 (1 HSPs)
scaffold0107 (255-310)||(31592-31647)
[»] scaffold0389 (1 HSPs)
scaffold0389 (155-208)||(10854-10908)
[»] scaffold0183 (1 HSPs)
scaffold0183 (280-322)||(6905-6947)
[»] scaffold0151 (1 HSPs)
scaffold0151 (156-209)||(22422-22476)
[»] scaffold0700 (1 HSPs)
scaffold0700 (129-209)||(2691-2772)
[»] scaffold0138 (1 HSPs)
scaffold0138 (129-209)||(22429-22510)
[»] scaffold0516 (1 HSPs)
scaffold0516 (280-316)||(12039-12075)
[»] scaffold0243 (1 HSPs)
scaffold0243 (129-208)||(2317-2397)


Alignment Details
Target: chr2 (Bit Score: 367; Significance: 0; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 14906664 - 14906278
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906664 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 14906565  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906564 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 14906465  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906464 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 14906365  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  14906364 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 14906278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 23820110 - 23820496
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820110 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 23820209  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820210 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 23820309  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820310 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 23820409  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  23820410 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 23820496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 20015050 - 20015436
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20015050 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 20015149  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  20015150 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaagttggag 20015249  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20015250 cacgaatttagcaacaattatccattcattcatttcaaccaatttcatctaaatcatgaaaaattgcaaagaatgaacatgatcatgataaagactaacc 20015349  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  20015350 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagttttcccaattggattcttcaagttcttctctc 20015436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 26 - 387
Target Start/End: Complemental strand, 19689600 - 19689239
Alignment:
Q  26 acaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatat 125  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689600 acaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatat 19689501  T
Q  126 tcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689500 ttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T
Q  226 tcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagac 325  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19689400 tcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttaaatgaagattagac 19689301  T
Q  326 caaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  19689300 caaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 19689239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 93 - 386
Target Start/End: Complemental strand, 17396784 - 17396492
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| ||||||||||||| ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 17396686  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  17396685 agttggagcacgaatttagcaacaattatccattcattcatgtcaacccatttcatacaaatcatgaaaaattgcaaagaatgaacatgattatggtaaa 17396586  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctct 386  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||  ||||||||||||||||||||||||||||    
T  17396585 gactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctcacccaattggattcttcaagttcttctct 17396492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 53 - 386
Target Start/End: Complemental strand, 25265563 - 25265227
Alignment:
Q  53 catcataattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatc 151  Q
    ||||||||||||||||||||||  |||| |||| | |||  |||||||||||| |||||  |||||| ||||| |  |||||||||||| ||||||||||    
T  25265563 catcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatc 25265464  T
Q  152 atacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatcc 250  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |    
T  25265463 atacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatac 25265364  T
Q  251 aaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccc 350  Q
    ||   |||| |||||||||  |||||||||||||||||| ||||||||||||||||| |||||| | |||||  |||||||||||||||| |||||| ||    
T  25265363 aacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttacattagataatgattaatccaaacctaggcttcactttagctcc 25265264  T
Q  351 taaactt-tcccaattggattcttcaagttcttctct 386  Q
    ||| |||  ||||||| ||||||||||| ||||||||    
T  25265263 taagcttaccccaatttgattcttcaagctcttctct 25265227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 94 - 312
Target Start/End: Complemental strand, 7507975 - 7507756
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| | ||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  7507975 cacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcaca 7507876  T
Q  194 gttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
        ||||||||||||||||| |||||| |||||||||| |||||||||| ||||| |||   |||| |||||||||  |||||||||||||||||| ||    
T  7507875 acaagagcacgaatttagcaataattattcattcattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaa 7507776  T
Q  293 gactaacccccttaccttag 312  Q
    ||||||||||||||||||||    
T  7507775 gactaacccccttaccttag 7507756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 59 - 347
Target Start/End: Complemental strand, 36982608 - 36982328
Alignment:
Q  59 aattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaa 157  Q
    |||||||||||||| || |||| |||| | |||  |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||| ||||| |||||    
T  36982608 aattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaa 36982509  T
Q  158 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcat 257  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||    ||   | ||||| |||    |    
T  36982508 ttatcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatacaacattt 36982417  T
Q  258 gaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    ||||| || |||| |||||  |||||||||||||||||||||||||||||||||||| |||| ||   | ||| ||||||||||||||||    
T  36982416 gaaaatttacaaa-aatgatgatgattatgataaagactaacccccttaccttagataaagactaataccaacttaggcttcaatttagc 36982328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 94 - 353
Target Start/End: Original strand, 462870 - 463117
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |    
T  462870 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcaca 462969  T
Q  194 gttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaag 293  Q
    |||||||||||||||||||||||||||||||          | | |  | ||||| |||    |||||| || |||  |||||  |||||||||||||||    
T  462970 gttggagcacgaatttagcaacaattatcca----------taagcaaaattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaag 463057  T
Q  294 actaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||| |||||||  || ||| |||||||||||||||| |||||    
T  463058 actaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 463117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 19794836 - 19794703
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19794836 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcac 19794737  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||||||||| | |||||||||||||    
T  19794736 agttggagcacgaatttaacgacaattatccatt 19794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 20627445 - 20627313
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || ||||||| |||||||   ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||     
T  20627445 gcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcac 20627346  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||| ||||||||||||||    
T  20627345 agttggagcacgaatttaacaacaattatccat 20627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 93 - 346
Target Start/End: Original strand, 8891373 - 8891616
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  8891373 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcac 8891472  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||||||||||||||||||||||||||||| || ||    ||   | ||||| |||    |||||| || |||  |||||  ||||||||||||||    
T  8891473 agttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaa 8891562  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttag 346  Q
    |||||||||| ||||||||||| |||||||  || ||| |||||||||||||||    
T  8891563 gactaacccctttaccttagataaagattaatcccaacttaggcttcaatttag 8891616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 24341521 - 24341390
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  ||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  24341521 gcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 24341422  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    ||||| |||| |||||||||||||||||||||    
T  24341421 agttgaagcatgaatttagcaacaattatcca 24341390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 43643053 - 43642958
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcca 224  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  43643053 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatcca 43642958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 255 - 387
Target Start/End: Complemental strand, 12641615 - 12641483
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||||||||||||  ||||||    ||||||||||||| |||||     
T  12641615 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaag 12641516  T
Q  355 ctttcccaattggattcttcaagttcttctctc 387  Q
    ||| |||||||||||||||||||||||||||||    
T  12641515 cttacccaattggattcttcaagttcttctctc 12641483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 387
Target Start/End: Original strand, 12728559 - 12728807
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | |||      
T  12728559 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcat-- 12728656  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 326  Q
            |||||||||| ||| |||  ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||  ||    
T  12728657 --------caacccattttcatacaa--catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaaccc 12728746  T
Q  327 aaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  12728747 aaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagttcttctctc 12728807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 387
Target Start/End: Original strand, 34824642 - 34824890
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | |||      
T  34824642 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcat-- 34824739  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 326  Q
            |||||||||| ||| |||  ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||  ||    
T  34824740 --------caacccattttcatacaa--catgagaaaatgcaaaaattgtacatgattatgataatcactaacccccttaccttagaagaagattaaccc 34824829  T
Q  327 aaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  34824830 aaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagttcttctctc 34824890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 277 - 387
Target Start/End: Complemental strand, 12635819 - 12635709
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaa 376  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| ||||||||||||||||||    
T  12635819 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 12635720  T
Q  377 gttcttctctc 387  Q
    |||||||||||    
T  12635719 gttcttctctc 12635709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 387
Target Start/End: Original strand, 23774438 - 23774551
Alignment:
Q  274 tgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattctt 373  Q
    ||||| ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||||||||    
T  23774438 tgaacttgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattctt 23774537  T
Q  374 caagttcttctctc 387  Q
    ||||||||||||||    
T  23774538 caagttcttctctc 23774551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 255 - 387
Target Start/End: Original strand, 8944129 - 8944261
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| |||||     
T  8944129 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaag 8944228  T
Q  355 ctttcccaattggattcttcaagttcttctctc 387  Q
    ||| ||||||||||||||||||||||| |||||    
T  8944229 cttacccaattggattcttcaagttctactctc 8944261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 277 - 387
Target Start/End: Complemental strand, 3798554 - 3798444
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaa 376  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| | ||| ||| ||||||||||||||||||    
T  3798554 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcataagcttacccaattggattcttcaa 3798455  T
Q  377 gttcttctctc 387  Q
    |||||||||||    
T  3798454 gttcttctctc 3798444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 9652828 - 9652754
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||| ||||||||||| |||||    
T  9652828 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggtttcaatttagctcctaa 9652754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 19886781 - 19886661
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||| |||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  19886781 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19886682  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  19886681 agcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 22863235 - 22863309
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| |||||| ||||||||| |||||    
T  22863235 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggctgcaatttagctcctaa 22863309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 33128335 - 33128447
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 341  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| |||||||||||||||||||||| | | |||||  |||||| |||||||||     
T  33128335 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcac 33128434  T
Q  342 tttagcccctaaa 354  Q
    |||||| ||||||    
T  33128435 tttagctcctaaa 33128447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 21273980 - 21273872
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||||||||||||| ||||||||||| |||||||  || ||| ||||||||| |||||| | ||| ||  |||||| | ||||| |||||    
T  21273980 atgattatgataaagactaacccc-ttaccttagataaagattaatcccaacttaggcttcactttagctcataagctcacccaatcttgattcctcaag 21273882  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  21273881 ctcttctctc 21273872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 16935876 - 16935943
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  16935876 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 16935943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 17006536 - 17006603
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  17006536 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 17006603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 24341365 - 24341267
Alignment:
Q  257 tgaaaaattgcaaaga--atgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||| |  ||||  ||||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||||||||| |||||| |||||    
T  24341365 tgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcattttagctcctaa 24341267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 42177942 - 42177875
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  42177942 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 42177875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 32466177 - 32466249
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||| |||||||||||| ||||||||||| | ||| |  |||||| |||||||||||||||| |||||    
T  32466177 tgattatgatgaagactaacccc-ttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaa 32466249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 22284278 - 22284310
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||||||||||||||||||||||    
T  22284278 atgattatgataaagactaacccccttacctta 22284310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 11231311 - 11231256
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  11231311 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 11231256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 22513158 - 22513103
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  22513158 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 22513103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 24685754 - 24685699
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  24685754 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 24685699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 310
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  279 atgattatgataaagactaacccccttacctt 310  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 28031167 - 28031100
Alignment:
Q  278 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    |||||||||||| |||||||||||||||||||||| | | |||||   ||||| ||||||||| ||||    
T  28031167 catgattatgatgaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcacttta 28031100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 28775780 - 28775725
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  28775780 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 28775725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 24884852 - 24884933
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | |||||| |||||| |||||||||||||| |||| |||||| |||||    
T  24884852 aacatgcaatttcaccaacaacaattcaattatcaccaattccatgcattcaaacatatcatcatagttagagcacaaattt 24884933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 68158 - 68238
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  68158 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 68238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 19794661 - 19794629
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    ||||||||||| |||||||||||||||||||||    
T  19794661 atgattatgatgaagactaacccccttacctta 19794629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 20627270 - 20627238
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||||||||||||| ||||||||    
T  20627270 atgattatgataaagactaaccccgttacctta 20627238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 22275045 - 22275077
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    ||||||||||||||| |||||||||||||||||    
T  22275045 atgattatgataaaggctaacccccttacctta 22275077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 363; Significance: 0; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 22579 - 22965
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22579 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 22678  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22679 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 22778  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22779 cacgaatttagcaacaattattcattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 22878  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  22879 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 22965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 26834 - 27220
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26834 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 26933  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26934 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 27033  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27034 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaaggaacatgattatgataaagactaacc 27133  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27134 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 27220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 359; Significance: 0; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 2449462 - 2449077
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449462 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 2449363  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449362 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 2449263  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449262 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 2449163  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  2449162 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcttctctc 2449077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 78 - 387
Target Start/End: Complemental strand, 13955036 - 13954728
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||||| |||  ||||||| |||||||||  ||||||| || |||| ||||||||||||  ||||||||||||||||| || | |||||||||||||    
T  13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa 277  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  13954936 caa-catatcatcaaagttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaaattgcaaagaatgaa 13954838  T
Q  278 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaag 377  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||    
T  13954837 catgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcacccaattggattcttcaag 13954738  T
Q  378 ttcttctctc 387  Q
    ||||||||||    
T  13954737 ttcttctctc 13954728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 93 - 387
Target Start/End: Original strand, 45860937 - 45861230
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| ||||||||||||  ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||    
T  45861036 agttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaaattgcaaagaatgaatatgattatggtaaa 45861135  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||    
T  45861136 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcacccaattggattcttcaagttcttctctc 45861230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 59 - 353
Target Start/End: Complemental strand, 17912648 - 17912356
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  17912648 aattcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaat 17912549  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatg 258  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  17912548 tatcatcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaataatg 17912450  T
Q  259 aaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
     ||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||  || | |  ||||||||||||||| |||||    
T  17912449 -aaaattgcaataaatgaacatgattatgataaagactaacccccttaccttagataaagattaatcccacctcaggcttcaatttagctcctaa 17912356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 93 - 293
Target Start/End: Complemental strand, 13975853 - 13975654
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| ||||||||||||  ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  13975754 agttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaaattgcaaagaatgaacatgattatggtaaa 13975655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 16744281 - 16744115
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| |    
T  16744281 aattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacact 16744182  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  16744181 tattatcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccat 16744115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 101 - 387
Target Start/End: Original strand, 15614973 - 15615245
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||| || || |||  |||    
T  15614973 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagag 15615072  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaac 299  Q
    ||| ||| |||||  |||| | |||          |||||||||| ||| |||  ||||| ||| ||||||  || | ||||||||||||||||||||||    
T  15615073 cacaaatctagcatgaattgttcat----------caacccattttcatacaa--catgagaaaatgcaaa--atta-catgattatgataaagactaac 15615157  T
Q  300 ccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||    
T  15615158 ccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttattctctc 15615245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 51158150 - 51158018
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  51158150 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 51158051  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  51158050 agttggagcacgaatttagcaacaattatccat 51158018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 93 - 322
Target Start/End: Complemental strand, 14842693 - 14842476
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||||||||| ||||||| ||| |||  |||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||     
T  14842693 gcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcac 14842594  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||||||||||||||||||||||||||||  | |||        || ||||| |||    ||| || ||||||||  |||| ||||||||||||||    
T  14842593 agttggagcacgaatttagcaacaattatccat--aatca--------caattcatacaacatttgagaatttgcaaag--tgaagatgattatgataaa 14842506  T
Q  293 gactaacccccttaccttagatgaagatta 322  Q
    ||||||||||||||||||||| ||||||||    
T  14842505 gactaacccccttaccttagaagaagatta 14842476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 15859156 - 15859023
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   ||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  15859156 gcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 15859057  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  15859056 agttggagcacgaatttagcaacaattatccatt 15859023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 128 - 387
Target Start/End: Complemental strand, 11986263 - 11986003
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| | | |||||||||||||||| || || ||||||| || || ||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  11986263 aaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatcaattc 11986164  T
Q  228 attcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacca 327  Q
    ||||   |||||||||||||| |||   | || || ||||||  | |||||||||||||||| |||||||||||||||||||||||| | |||||  |||    
T  11986163 attccaatcaacccatttcatacaacaaaggagaagttgcaataattgaacatgattatgatgaagactaacccccttaccttagataatgattaatcca 11986064  T
Q  328 aacctaggcttcaatttagcccctaaact-ttcccaattggattcttcaagttcttctctc 387  Q
    ||| |||||||||||||||| ||||| ||   ||||||| ||||||||||  |||||||||    
T  11986063 aacttaggcttcaatttagctcctaagctcaccccaatttgattcttcaaactcttctctc 11986003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 12030279 - 12030147
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||| ||||| ||||| ||| ||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  12030279 gcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 12030180  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  12030179 agttggagcacgaatttagcaacaattatccat 12030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 15936759 - 15936633
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  15936759 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 15936660  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||||||||| |||||||    
T  15936659 agttggagcacgaatttagtaacaatt 15936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 2049941 - 2050073
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || |||| || |||||||  |||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||     
T  2049941 gcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcac 2050040  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  2050041 agttggagcacgaatttagcaacaattatccat 2050073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 13839025 - 13839153
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||     
T  13839025 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13839124  T
Q  193 agttggagcacgaatttagcaacaattat 221  Q
    |||||||||||||||||||||||||||||    
T  13839125 agttggagcacgaatttagcaacaattat 13839153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 15938601 - 15938475
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||| |     
T  15938601 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattac 15938502  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    |||||||||||| |||||| |||||||    
T  15938501 agttggagcacgtatttagtaacaatt 15938475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 198 - 387
Target Start/End: Complemental strand, 8268763 - 8268573
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa--catgattatgataaagac 295  Q
    ||||||||||||| ||||||||||| ||||||||   |||||| |||||||  ||| || | ||||||||||| ||   |  ||||||||||||||  ||    
T  8268763 gagcacgaatttaacaacaattatcaattcattccaatcaacctatttcat--aaaacaaggaaaattgcaaacaaaacaatcatgattatgataataac 8268666  T
Q  296 taacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattgga-ttcttcaagttcttctctc 387  Q
    |||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||| |||||||||||||||||||    
T  8268665 taacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggatttcttcaagttcttctctc 8268573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 198 - 387
Target Start/End: Complemental strand, 8275863 - 8275673
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa--catgattatgataaagac 295  Q
    ||||||||||||| ||||||||||| ||||||||   |||||| |||||||  ||| || | ||||||||||| ||   |  ||||||||||||||  ||    
T  8275863 gagcacgaatttaacaacaattatcaattcattccaatcaacctatttcat--aaaacaaggaaaattgcaaacaaaacaatcatgattatgataataac 8275766  T
Q  296 taacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattgga-ttcttcaagttcttctctc 387  Q
    |||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||| |||||||||||||||||||    
T  8275765 taacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggatttcttcaagttcttctctc 8275673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 387
Target Start/End: Original strand, 54651625 - 54651873
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattca 228  Q
    |||||| ||||| ||  |||||||||||||||| ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||||| |||       
T  54651625 aacatgcaatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcat--- 54651721  T
Q  229 ttcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacca 327  Q
           |||||||||| ||| |||  ||||| |||||||||| | |||||||||||||||| ||||| |||||||||||||||||||| |||||  |||    
T  54651722 -------caacccattttcatacaa--catgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttaccttagatgatgattaaccca 54651812  T
Q  328 aacctaggcttcaatttagcccctaaact-ttcccaattggattcttcaagttcttctctc 387  Q
    ||| |  ||||||||| ||| ||||| ||   ||||||| ||||| ||||| |||||||||    
T  54651813 aacttttgcttcaattaagctcctaagctcaccccaatttgattcatcaagctcttctctc 54651873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 38168237 - 38168311
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||| |||||    
T  38168237 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 38168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 2050115 - 2050192
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaact 356  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| |||||||||||||||| ||||||||    
T  2050115 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaaact 2050192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 16821256 - 16821369
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||  ||||| |||  |||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  16821256 aaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcata 16821355  T
Q  178 caaacatatcatca 191  Q
    |||||||| |||||    
T  16821356 caaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||  |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 19231982 - 19232045
Alignment:
Q  163 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccatt 19232045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 33342204 - 33342278
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  || ||| |||||||||||||||| |||||    
T  33342204 atgattatgataaagactaaccctcttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 33342278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 53771365 - 53771474
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| ||||| ||  |||||| | ||||| |||||    
T  53771365 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 53771464  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  53771465 ctcttctctc 53771474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 23492696 - 23492803
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagt 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||    ||||||||| ||| ||||| ||| ||||| | ||||| |||||     
T  23492696 atgattatgataaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccaaattgattcctcaagc 23492795  T
Q  379 tcttctct 386  Q
    | ||||||    
T  23492796 tattctct 23492803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 16261777 - 16261886
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||||||||||||||||||||||||| |||||||   | ||| ||||||||| |||||| ||||| ||  |||||| | ||||| |||||    
T  16261777 atgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 16261876  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  16261877 ctcttctctc 16261886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 19260781 - 19260713
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||| ||||||||||||    
T  19260781 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttagacttcaatttagc 19260713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16744507 - 16744436
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaac 72  Q
    |||||||  |||||| | |||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16744507 atgagatcaacatcaactatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 16744436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 12030105 - 12030031
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||| || ||||||||||||||||||| |||||||  || ||| |||||||||||||||| |||||    
T  12030105 atgattatgataatgattaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 12030031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 13839200 - 13839274
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||  ||  || |||||||||||||||| |||||    
T  13839200 atgattatgatgaagactaacccccttaccttagatgaagagtaatccctacttaggcttcaatttagctcctaa 13839274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 14080701 - 14080756
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  14080701 caattatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 30153265 - 30153308
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttaccttagatgaagatta 30153308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 14285289 - 14285363
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| || |||||| |||||| |||||    
T  14285289 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 14285363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 54685233 - 54685159
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||| |||||||||||| |||||    
T  54685233 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttagacttcaatttagctcctaa 54685159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 28558494 - 28558559
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattt 344  Q
    |||||||||||||| |||||||| |||||||||||| |||||||  || ||| |||||||||||||    
T  28558494 atgattatgataaaaactaaccctcttaccttagataaagattaatcccaacttaggcttcaattt 28558559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 5228595 - 5228662
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | |||||||||||||||| |  |||||||||||||||||||| ||||||||    
T  5228595 catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagatta 5228662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 18911276 - 18911343
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  18911276 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 18911343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 19947026 - 19947101
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||||||||| |||||||||||||||||||||| | | |||||  |||||| ||||||||| |||| | ||||||    
T  19947026 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaaa 19947101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 19260869 - 19260823
Alignment:
Q  179 aaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||||| | || ||||||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccat 19260823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 51961063 - 51960997
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| ||| ||||| ||||    
T  51961063 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttagacttcacttta 51960997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 16933901 - 16933868
Alignment:
Q  279 atgattatgataaagactaacccccttaccttag 312  Q
    ||||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttaccttag 16933868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 310
Target Start/End: Original strand, 49232603 - 49232774
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | ||       
T  49232603 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttca--- 49232699  T
Q  228 attcatttcaaccca-tttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
           |||||||| |||||| |||  ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  49232700 -------tcaacccattttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 49232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 17955916 - 17955884
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||||||||||||||||||||||    
T  17955916 atgattatgataaagactaacccccttacctta 17955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 1467712 - 1467657
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  1467712 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 1467657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 12264881 - 12264790
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  12264881 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 12264790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 312
Target Start/End: Complemental strand, 12902179 - 12902006
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||||| |||      
T  12902179 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattattcat-- 12902082  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttag 312  Q
            |||||||||| ||| |||  ||||| ||| |||||| | |||||||||||||||| |  |||||||||||||||||||    
T  12902081 --------caacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttag 12902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 15468429 - 15468338
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  15468429 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaatt 15468338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 25058906 - 25058997
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  25058906 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 25058997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 12812125 - 12812179
Alignment:
Q  256 atgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    |||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  12812125 atgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 12812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 12264765 - 12264668
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagccccta 352  Q
    ||||| ||| |||||| | || |||||||||||||||  ||||||||||||||||| || || |||||  || |||||  ||||||||| ||| ||||    
T  12264765 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagatgattaatcccaacctttgcttcaattcagctccta 12264668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 15468291 - 15468246
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||||||||||  ||||||||||||||||| || ||||||||    
T  15468291 acatgattatgataataactaacccccttacctttgaagaagatta 15468246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 18896995 - 18896950
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||||||||||  ||||||||||||||||| || ||||||||    
T  18896995 acatgattatgataataactaacccccttaccttggaagaagatta 18896950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 2844514 - 2844546
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  2844514 atgattatgataaaaactaacccccttacctta 2844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 3992873 - 3992905
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  3992873 atgattatgataaaaactaacccccttacctta 3992905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 4145894 - 4145814
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| | ||||||  || ||||||| | ||||||||| || ||||||||||| || | |||||| ||||||||    
T  4145894 aacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatatcaccataattggagtacgaattt 4145814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 15857195 - 15857163
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    ||||||||||| |||||||||||||||||||||    
T  15857195 atgattatgatgaagactaacccccttacctta 15857163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 18969968 - 18970044
Alignment:
Q  11 catcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtca-aattcatc 86  Q
    ||||| |||||||  |||| || ||| ||||||||| |  ||||||| |||||||||||||||||||| ||||||||    
T  18969968 catcaacaatcaaccacaaccacaacttataatcatgctttccatcagaattcaacaacaacatgtcataattcatc 18970044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 19232089 - 19232121
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    ||||||| |||||||||||||||||||||||||    
T  19232089 atgattaagataaagactaacccccttacctta 19232121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 25059045 - 25059089
Alignment:
Q  278 catgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||||||||||||  ||||||||||||||||| || ||||||||    
T  25059045 catgattatgataataactaacccccttacctttgaagaagatta 25059089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 47784847 - 47784767
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||||||||| | || |||||||||||    
T  47784847 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaatt 47784767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 54038056 - 54038024
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  54038056 atgattatgataaaaactaacccccttacctta 54038024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 55513193 - 55513225
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  55513193 atgattatgataaaaactaacccccttacctta 55513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 1806 - 1421
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1806 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 1707  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1706 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 1607  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 1507  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||    
T  1506 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-aggattcttcaagttcttctctc 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 355; Significance: 0; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 5238126 - 5238512
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238126 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 5238225  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238226 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 5238325  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238326 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 5238425  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  5238426 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 5238512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 24661472 - 24661086
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661472 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 24661373  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661372 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 24661273  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661272 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 24661173  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  24661172 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 24661086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 43685585 - 43685971
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||| |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685585 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 43685684  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685685 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 43685784  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685785 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 43685884  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  43685885 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 43685971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 59 - 387
Target Start/End: Complemental strand, 22907380 - 22907052
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22907380 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 22907281  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatg 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22907280 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatg 22907181  T
Q  259 aaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaacttt 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||     
T  22907180 aaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctta 22907081  T
Q  359 cccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||||||||||||||||||    
T  22907080 cccaattggattcttcaagttcttctctc 22907052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 93 - 387
Target Start/End: Original strand, 17345700 - 17345995
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||| |||||     
T  17345700 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcac 17345799  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataa 291  Q
    |||| |||||||||||| |||||||||||||||| ||||| |||||||||| ||||| |||   |||| |||||||||  |||||||||||||||||| |    
T  17345800 agttagagcacgaatttcgcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 17345899  T
Q  292 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||||||| ||| ||||||||  ||||||    ||||||||| ||| ||||| ||| ||| | | ||||| ||||||| |||||||    
T  17345900 agactaacccccttacctaagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagttattctctc 17345995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 16193848 - 16193716
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  16193848 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcat 16193749  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||| ||||||    
T  16193748 agttggagcacgaatttagcaacaatcatccat 16193716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 93 - 353
Target Start/End: Complemental strand, 43373600 - 43373350
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||     
T  43373600 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 43373501  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||||||||||||||||  ||||||||||| || ||    ||   | ||||| |||  |||   ||||| || | |||||  ||||||||||||||    
T  43373500 agttggagcacgaatttagcattaattatccatt-ataca----aa---aattcatacaa--catttgaaatttcacaaaatgatgatgattatgataaa 43373411  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| |||||    
T  43373410 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 43373350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 24928923 - 24928791
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  24928923 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcac 24928824  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  24928823 agttggagcacgaatttagcaacaattatccat 24928791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 16405071 - 16404975
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  16405071 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccat 16404975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 6774378 - 6774258
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  6774378 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 6774279  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  6774278 agtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 24549113 - 24549233
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  24549113 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 24549212  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  24549213 agtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| |||||| |||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 255 - 387
Target Start/End: Complemental strand, 16873024 - 16872892
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||   |||||    ||||||||||||| |||||     
T  16873024 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaactcaaactcttgcttcaatttagctcctaag 16872925  T
Q  355 ctttcccaattggattcttcaagttcttctctc 387  Q
    ||| |||||||||||||||||||||||||||||    
T  16872924 cttacccaattggattcttcaagttcttctctc 16872892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 24385684 - 24385610
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| ||||||||| |||||| |||||    
T  24385684 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcactttagctcctaa 24385610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22907606 - 22907535
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaac 72  Q
    |||||||  |||||| |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  22907606 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 22907535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 24928748 - 24928674
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||| ||||||||||| |||||||  || ||| ||| |||||||||||| |||||    
T  24928748 atgattatgataaagactaaccccattaccttagataaagattaatcccaacttagacttcaatttagctcctaa 24928674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 41506741 - 41506673
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    ||||||||||| || ||||||||||||||||||||| | |||||  |||||| ||||||||||||||||    
T  41506741 atgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagc 41506673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 21494389 - 21494314
Alignment:
Q  278 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||  |||||||||||||||||||||||| | |||||  |||||| ||||||||| |||||| |||||    
T  21494389 catgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 21494314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 16193674 - 16193601
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |  || ||| |||||||||||||||| |||||    
T  16193674 atgattatgataaagactaacccc-ttaccttagataaagatgaatcccaacttaggcttcaatttagctcctaa 16193601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 7000551 - 7000478
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||| || |||||||||||||| |||||| | |||||  |||||| |||||||||||||||| |||||    
T  7000551 tgattatgatgaaaactaacccccttactttagataaggattaacccaaacttaggcttcaatttagctcctaa 7000478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 2545183 - 2545298
Alignment:
Q  198 gagcacgaattt-agcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa--catgattatgataaaga 294  Q
    |||||||||||| | ||||||||||| ||||||||   |||||||||||||| |||  || | ||||||||||| ||   |  |||||||||||| ||||    
T  2545183 gagcacgaattttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgatgaaga 2545280  T
Q  295 ctaacccccttaccttag 312  Q
    ||||||||||||||||||    
T  2545281 ctaacccccttaccttag 2545298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 13662238 - 13662171
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  13662238 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 13662171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 13720901 - 13720834
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  13720901 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 13720834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 22886654 - 22886728
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| |||||||||||||||||||||| | | |||||  |||||| || |||||| |||||| |||||    
T  22886654 atgattatgattaagactaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaa 22886728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 322
Target Start/End: Complemental strand, 22006347 - 22006164
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | |||      
T  22006347 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcat-- 22006250  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
            |||||||||| ||| |||  ||||| ||| |||||| | || |||||||||||||||  ||||||||||||||||| || ||||||||    
T  22006249 --------caacccattttcatacaa--catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagaagatta 22006164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 26011660 - 26011741
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  26011660 aacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 26011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 24716794 - 24716762
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||||||||||||||||||||||    
T  24716794 atgattatgataaagactaacccccttacctta 24716762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 271333 - 271278
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  271333 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 644587 - 644642
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  644587 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 830322 - 830377
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  830322 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 353
Target Start/End: Complemental strand, 3431245 - 3431134
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 341  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| |||||||||||||||||||||| | | ||| |  |||||| | |||||||     
T  3431245 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaatccaaacttgggcttcac 3431146  T
Q  342 tttagcccctaa 353  Q
    |||||| |||||    
T  3431145 tttagctcctaa 3431134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 15319132 - 15319077
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  15319132 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 15319077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 15499501 - 15499446
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  15499501 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 15499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 16195398 - 16195489
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  |||||| ||||| ||   ||| ||||||||||||||||||    
T  16195398 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaatt 16195489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 23226131 - 23226076
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| |||||| |||||    
T  23226131 caattatcatcaatttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 18612643 - 18612693
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcat 248  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||    
T  18612643 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcat 18612693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 22147675 - 22147725
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcat 248  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||    
T  22147675 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcat 22147725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 16674341 - 16674296
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||    
T  16674341 acatgattgtgataataactaacccccttaccttagaagaagatta 16674296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 222826 - 222754
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat 150  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||    
T  222826 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 274766 - 274798
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  274766 atgattatgataaaaactaacccccttacctta 274798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 641083 - 641051
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  641083 atgattatgataaaaactaacccccttacctta 641051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 736449 - 736377
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat 150  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||    
T  736449 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 826889 - 826857
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  826889 atgattatgataaaaactaacccccttacctta 826857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 860344 - 860272
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat 150  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||    
T  860344 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 17285370 - 17285450
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| |||||||||  ||||||||||||| | ||||||||||||||    
T  17285370 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataattggagcacgaatt 17285450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 24549283 - 24549319
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttaga 313  Q
    |||||||||||||||  ||||||||||||||||||||    
T  24549283 acatgattatgataatcactaacccccttaccttaga 24549319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 355; Significance: 0; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 15441788 - 15441402
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441788 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 15441689  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441688 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 15441589  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441588 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 15441489  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  15441488 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 15441402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 30262353 - 30261967
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262353 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 30262254  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262253 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 30262154  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262153 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 30262054  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30262053 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 30261967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 11516266 - 11516651
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||| |||||||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516266 atgagatcaacatcaacaatcaaccacaatcataacatatactcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 11516365  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516366 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 11516465  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516466 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 11516565  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  11516566 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcttctctc 11516651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 59 - 387
Target Start/End: Original strand, 7293113 - 7293441
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7293113 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 7293212  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatg 258  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7293213 tattattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatg 7293312  T
Q  259 aaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaacttt 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||     
T  7293313 aaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctta 7293412  T
Q  359 cccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||||||||||||||||||    
T  7293413 cccaattggattcttcaagttcttctctc 7293441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 93 - 386
Target Start/End: Complemental strand, 25292470 - 25292178
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||| ||| || |||| ||||||| ||||||||||||| ||||||||||||||||| || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||    
T  25292370 agttggagcacaaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcttgaaaaattgcaaagaatgaacttgattatgataaa 25292271  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||    
T  25292270 gactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttacccaatt-gattcctcaagttcttctct 25292178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 183 - 386
Target Start/End: Complemental strand, 14114031 - 14113828
Alignment:
Q  183 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatga 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatga 14113932  T
Q  283 ttatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttctt 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  14113931 ttatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaagcttacccaattggattcttcaagttctt 14113832  T
Q  383 ctct 386  Q
    ||||    
T  14113831 ctct 14113828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 183 - 386
Target Start/End: Complemental strand, 14423681 - 14423479
Alignment:
Q  183 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatga 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaatgaacatga 14423582  T
Q  283 ttatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttctt 382  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  14423581 ttatgat-aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaagcttacccaattggattcttcaagttctt 14423483  T
Q  383 ctct 386  Q
    ||||    
T  14423482 ctct 14423479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 128 - 387
Target Start/End: Original strand, 13321182 - 13321443
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |     
T  13321182 aaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccactt 13321281  T
Q  228 attcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 326  Q
    ||||| |||||||||| ||||| |||   |||| |||||||||  |||||||||||||||||| |||||||||||||||||||||||| | |||||  ||    
T  13321282 attcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttaccttagataatgattaatcc 13321381  T
Q  327 aaacctaggcttcaatttagcccctaaactt-tcccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||| |||||| ||||| |||  ||||||| ||||||||||| |||||||||    
T  13321382 aaacctaggcttcactttagctcctaagcttaccccaatttgattcttcaagctcttctctc 13321443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 94 - 345
Target Start/End: Complemental strand, 47481162 - 47480910
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  47481162 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 47481063  T
Q  194 gttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||   |||| |||||||||  |||||| ||||||||||| ||    
T  47481062 gttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaatatgattatgatgaa 47480963  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    |||||||||||||||||||||| | |||||  |||||| ||||||||| ||||    
T  47480962 gactaacccccttaccttagataatgattaatccaaacttaggcttcacttta 47480910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 93 - 353
Target Start/End: Original strand, 16211897 - 16212145
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||| ||||| || ||||||| ||||||||| |||||||||||||||||||||||||||||     
T  16211897 gcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 16211996  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||||||||||||||||||||||||||| ||||          | | |  | ||||| |||  |||   ||||| || | |||||  ||||||||||||||    
T  16211997 agttggagcacgaatttagcaacaattgtcca----------taagcaaaattcatacaa--catttgaaatttcacaaaatgatgatgattatgataaa 16212084  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||  || ||| |||||||||||||||| |||||    
T  16212085 gactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 16212145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 93 - 353
Target Start/End: Complemental strand, 11580871 - 11580619
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  11580871 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcac 11580772  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||||||||||||||||| ||||||||||| || ||    ||   | ||||| |||    |||||| || |||| |||||  ||||||||||||||    
T  11580771 agttggagcacgaatttagcaataattatccatt-atgca----aa--aaattcatacaacatttgaaaatttacaaa-aatgatgatgattatgataaa 11580680  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||| ||||||||||||||| |||||||  || ||| |||||||||||||||| |||||    
T  11580679 gactaatccccttaccttagattaagattaatcccaacttaggcttcaatttagctcctaa 11580619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 93 - 353
Target Start/End: Original strand, 36052795 - 36053045
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||     
T  36052795 gcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 36052894  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||| |  |||||||||||||||||||||| || ||    ||   | ||||| |||  |||   ||||| || | |||||  ||||||||||||||    
T  36052895 agttggagtataaatttagcaacaattatccatt-ataca----aa---aattcatacaa--catttgaaatttcacaaaatgatgatgattatgataaa 36052984  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| |||||    
T  36052985 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 36053045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 93 - 353
Target Start/End: Complemental strand, 13037146 - 13036896
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||     
T  13037146 gcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13037047  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||||||||||||||||||||||||||||| || ||    ||   | ||||| |||    |||||| || |||  |||||  ||||||||| | ||    
T  13037046 agttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatggtgaa 13036957  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||| |||||||  || ||| |||||||||||||||| |||||    
T  13036956 gactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 13036896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 18253967 - 18253841
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  18253967 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 18253868  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||||||||| |||||||    
T  18253867 agttggagcacgaatttagtaacaatt 18253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 3060101 - 3060229
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||||| || || ||||||| |||||||  |||||||||||| ||||||| |  ||||||||| ||||||| ||||||||||| |||| |||| ||||    
T  3060101 aattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagtt 3060200  T
Q  197 ggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||    
T  3060201 ggagcacgaatttagcaacaattatccat 3060229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 16479082 - 16478968
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||      
T  16479082 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgc 16478983  T
Q  193 agttggagcacgaat 207  Q
    |||  ||||||||||    
T  16478982 agtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 255 - 387
Target Start/End: Original strand, 13758653 - 13758785
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| |||||     
T  13758653 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaag 13758752  T
Q  355 ctttcccaattggattcttcaagttcttctctc 387  Q
    ||| |||||||||||||||||||||||||||||    
T  13758753 cttacccaattggattcttcaagttcttctctc 13758785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 2437590 - 2437715
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    |||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  194 gttggagcacgaatttagcaacaatt 219  Q
        ||||||||||||||||| ||||    
T  2437690 acaagagcacgaatttagcaagaatt 2437715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 13911136 - 13911024
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  201 cacgaatttagca 213  Q
    |||||||||||||    
T  13911036 cacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 2029244 - 2029318
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| |||||||   | ||| |||||||||||||||| |||||    
T  2029244 atgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcaatttagctcctaa 2029318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 42056220 - 42056146
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| |||||    
T  42056220 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 42056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 296094 - 295965
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||| ||||||| ||||||| ||||| |  |||||| ||||| |||||||||||||  ||||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  197 ggagcacgaatttagcaacaattatccatt 226  Q
     || ||||||||||||||||||||| ||||    
T  295994 agaacacgaatttagcaacaattattcatt 295965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 3049905 - 3049973
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  || ||| ||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagc 3049973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7292887 - 7292958
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaac 72  Q
    |||||||  |||||| |||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  7292887 atgagatcaacatcaacaatcaaccacaatcacaacatataatcatacactccatcataattcaacaacaac 7292958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 25124450 - 25124524
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  | |||| ||||||||| |||||| |||||    
T  25124450 atgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaa 25124524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 2190117 - 2190008
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||  || ||| ||||||||| |||| | ||||| ||  |||||| | ||||| |||||    
T  2190117 atgattatgataaaaactaaccgccttaccttagataaagattaatcccaacttaggcttcactttaactcctaagctcacccaatcttgattcctcaag 2190018  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  2190017 ctcttctctc 2190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 322
Target Start/End: Complemental strand, 18980110 - 18979927
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | |||      
T  18980110 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcat-- 18980013  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
            |||||||||| ||| |||  ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  18980012 --------caacccattttcatacaa--catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 18979927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 15760087 - 15760020
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | |||||||||||||||| |  |||||||||||||||||||| ||||||||    
T  15760087 catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagatta 15760020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 15927851 - 15927918
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  15927851 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 15927918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 48622754 - 48622664
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    |||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| |||  |||||||||||||||| |||||    
T  48622754 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaatt 48622664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 14250871 - 14250806
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagat 320  Q
    ||||| ||| |||||| |||||||||||||| ||| |  |||||||||||||||||||| ||||||    
T  14250871 catgagaaaatgcaaaaaatgaacatgattacgatgataactaacccccttaccttagaagaagat 14250806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 322
Target Start/End: Complemental strand, 15950880 - 15950697
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | |||      
T  15950880 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcat-- 15950783  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
            |||||||||| ||| |||  ||||| ||| |||||| | || |||||||||||||||  ||||||||||||||||| || ||||||||    
T  15950782 --------caacccattttcatacaa--catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagaagatta 15950697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 16915009 - 16914928
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
T  16915009 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 7823011 - 7823066
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  7823011 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 7823066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 7830322 - 7830377
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  7830322 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 7830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 27101610 - 27101555
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  27101610 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27101555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 27108958 - 27108903
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  27108958 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27108903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 27176716 - 27176771
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  27176716 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27176771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 38783702 - 38783647
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  38783702 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 38783647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 371380 - 371450
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttag 312  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| ||||||||||||||||||||||    
T  371380 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttag 371450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 9611474 - 9611555
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  9611474 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 9611555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 9839045 - 9839126
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  9839045 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 9839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 10000318 - 10000245
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||| ||||| |||||||||||||||||||| | |||  |  ||| ||||||||| |||||| |||||    
T  10000318 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 10000245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 13572979 - 13573024
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||    
T  13572979 acatgattgtgataataactaacccccttaccttagaagaagatta 13573024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 126738 - 126770
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  126738 atgattatgataaaaactaacccccttacctta 126770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 13377695 - 13377775
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  13377695 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 13377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 307
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  279 atgattatgataaagactaacccccttac 307  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 32493978 - 32493946
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  32493978 atgattatgataaaaactaacccccttacctta 32493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 355; Significance: 0; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 16536236 - 16536622
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16536236 atgagatcaacatcatcaatcaactacaatcataacatacaatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 16536335  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16536336 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaagttggag 16536435  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16536436 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 16536535  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  16536536 cccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 16536622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 20623008 - 20623394
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623008 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 20623107  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623108 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 20623207  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623208 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 20623307  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  20623308 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 20623394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 21233752 - 21233366
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233752 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 21233653  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233652 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 21233553  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233552 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 21233453  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  21233452 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 21233366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 37052783 - 37053169
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37052783 atgagatcaacatcatcaatcaaccacaatcataacatataatcataccctccatcataactcaacaacaacatgtcaaattcatccattttgcacaatt 37052882  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37052883 ttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 37052982  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37052983 cacgaatttagcaacaattatccattcattcatttcaacccatctcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 37053082  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  37053083 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 37053169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 25900629 - 25900244
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25900629 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaa-ttcatccattttgcacaatt 25900531  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25900530 ttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaagttggag 25900431  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25900430 cacgaatttagcaacaattatccgttcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 25900331  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  25900330 cccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctttcccaattggattcttcaagtccttctctc 25900244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 93 - 312
Target Start/End: Original strand, 34939408 - 34939628
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  34939408 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 34939507  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataa 291  Q
    |||| ||||||||||||||||||| ||||||||| ||||| |||||||||| ||||| |||   |||| |||||||||  |||||||||||||||||  |    
T  34939508 agttagagcacgaatttagcaacagttatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgaaga 34939607  T
Q  292 agactaacccccttaccttag 312  Q
    | |||||||||||||||||||    
T  34939608 acactaacccccttaccttag 34939628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 23507096 - 23507228
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  23507096 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23507195  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |  ||||||||||||||||||||||||||||||    
T  23507196 aaatggagcacgaatttagcaacaattatccat 23507228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 18531198 - 18531068
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  18531198 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaca 18531099  T
Q  194 gttggagcacgaatttagcaacaattatcca 224  Q
    |||||||||||||||||||||||||||||||    
T  18531098 gttggagcacgaatttagcaacaattatcca 18531068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 128 - 387
Target Start/End: Original strand, 32950861 - 32951121
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| | | |||||||||||||||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  32950861 aaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaattatcaattc 32950960  T
Q  228 attcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacca 327  Q
    ||||   |||||||||||||| |||   | || || ||||||  | |||||||| ||||||| ||||||||||||||||||||| || | |||||   ||    
T  32950961 attccaatcaacccatttcatacaacaaaggagaagttgcaataattgaacatggttatgatgaagactaacccccttaccttaaataatgattaattca 32951060  T
Q  328 aacctaggcttcaatttagcccctaaactt-tcccaattggattcttcaagttcttctctc 387  Q
    ||| ||| |||||||||||| ||||| |||  ||||||| ||||||||||| |||||||||    
T  32951061 aacttagacttcaatttagctcctaagcttaccccaatttgattcttcaagctcttctctc 32951121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 22053965 - 22053834
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||||     
T  22053965 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcac 22053866  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    ||||||||||||||||||||||||||||||||    
T  22053865 agttggagcacgaatttagcaacaattatcca 22053834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 93 - 353
Target Start/End: Complemental strand, 27182679 - 27182429
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| | |||||||||||||||||| |||| ||||||||||||||||||||||||     
T  27182679 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcac 27182580  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||||| ||||||||||||||||||||||| || ||    ||   | ||||| |||    |||||| || |||  |||||  ||||||||||| ||    
T  27182579 agttggagcatgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgatgaa 27182490  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||| | |||||||  || ||| |||||||||||||||| |||||    
T  27182489 gactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 27182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 255 - 387
Target Start/End: Complemental strand, 1219493 - 1219361
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| |||||     
T  1219493 catgagaaaatgcaaaaattgtacatgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaag 1219394  T
Q  355 ctttcccaattggattcttcaagttcttctctc 387  Q
    ||| |||||||||||||||||||||||||||||    
T  1219393 cttacccaattggattcttcaagttcttctctc 1219361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  95 acaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaag 194  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  195 ttggagcacgaattt 209  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 23328865 - 23328972
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagtt 379  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  23328865 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 23328964  T
Q  380 cttctctc 387  Q
    ||||||||    
T  23328965 cttctctc 23328972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 24616469 - 24616576
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagtt 379  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  24616469 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 24616568  T
Q  380 cttctctc 387  Q
    ||||||||    
T  24616569 cttctctc 24616576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 24712845 - 24712952
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagtt 379  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  24712845 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 24712944  T
Q  380 cttctctc 387  Q
    ||||||||    
T  24712945 cttctctc 24712952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 24745863 - 24745970
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagtt 379  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  24745863 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 24745962  T
Q  380 cttctctc 387  Q
    ||||||||    
T  24745963 cttctctc 24745970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 22366616 - 22366481
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  22366616 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 22366517  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| ||   ||||||||||||||||    
T  22366516 caaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  193 agttggagcacgaattta 210  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 210
Target Start/End: Complemental strand, 18778127 - 18777995
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  18778127 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 18778028  T
Q  178 caaacatatcatcaaagttggagcacgaattta 210  Q
    |||||||| ||||| ||   |||||||||||||    
T  18778027 caaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 25426760 - 25426880
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  25426760 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 25426859  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  25426860 agcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 4200120 - 4199985
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||| ||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  |||||||||||||||    
T  4200120 aaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 4200021  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| |    ||||||||||||||||    
T  4200020 caaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 12506 - 12626
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||| |||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  12506 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 12605  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  12606 agcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 21073715 - 21073595
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||| ||||||||||||||||||| |||||     
T  21073715 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcac 21073616  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  21073615 agcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 23981437 - 23981363
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||| |||||    
T  23981437 atgattttgatgaagactaacccccttacctaagatgaagattaatccaaacttaggcttcaatttagctcctaa 23981363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 21651018 - 21651092
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||| | |||||||||||||||||||||||||||  || ||| ||| |||||||||||| |||||    
T  21651018 atgattatgataaatattaacccccttaccttagatgaagattaatcccaacttagacttcaatttagctcctaa 21651092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 128 - 386
Target Start/End: Original strand, 23514728 - 23514975
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | |||      
T  23514728 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcat-- 23514825  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 326  Q
            |||||||||| ||| |||  ||||| ||| |||||| | |||||||||||||||| |  |||||||||||||||||||| ||||||||  ||    
T  23514826 --------caacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaaccc 23514915  T
Q  327 aaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctct 386  Q
    ||||    ||||||||| ||| ||||| ||| ||| | | ||||| ||||||| ||||||    
T  23514916 aaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagttattctct 23514975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 353
Target Start/End: Original strand, 2032135 - 2032207
Alignment:
Q  281 gattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||| || ||||||||||||||||||||| | |||||  |||||| |||||||||||||||| |||||    
T  2032135 gattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 2032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 387
Target Start/End: Complemental strand, 35791071 - 35790939
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||| |||||     
T  35791071 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 35790972  T
Q  355 ctttcccaattggattcttcaagttcttctctc 387  Q
    ||| ||| | | ||||| ||||| |||||||||    
T  35790971 cttaccccaattgattcctcaagctcttctctc 35790939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 345
Target Start/End: Complemental strand, 108797 - 108694
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 341  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| |||||||||||||||||||||||| |||||||  || ||| |||||||||     
T  108797 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcac 108698  T
Q  342 ttta 345  Q
    ||||    
T  108697 ttta 108694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 16105967 - 16106010
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  16105967 atgattatgataaagactaacccccttaccttagaagaagatta 16106010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 23507270 - 23507313
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  23507270 atgattatgataaagactaacccccttaccttagataaagatta 23507313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 25005137 - 25005210
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagccccta 352  Q
    ||||||||||| ||||||||||||||||| |||||| | |||||  |||||| ||||||||| |||||| ||||    
T  25005137 atgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctccta 25005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 7529228 - 7529296
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    ||||||||||  |||||||||||||||||||||||| | |||||  |||||| ||||||||| ||||||    
T  7529228 atgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagc 7529296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 7425607 - 7425674
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  7425607 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 7425674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 345
Target Start/End: Original strand, 17909742 - 17909889
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgc--aaagaatgaacatgattatgataaagac 295  Q
    ||||||||||||| ||||||||||| ||||||||   |||||||||||||| |||  || | ||||||||  | | ||  | |||||||||||  || ||    
T  17909742 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgctaacaaaacaatcatgattatgaagaacac 17909839  T
Q  296 taacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    ||||||||||||||||| | | |||||  |||||| ||||||||| ||||    
T  17909840 taacccccttaccttaggttatgattaatccaaacttaggcttcacttta 17909889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 36989743 - 36989688
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| |||||||||||| || |||||||||||||||  |||||||||||||||||    
T  36989743 catgagaaattgcaaagattgtacatgattatgataataactaacccccttacctt 36989688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 21205249 - 21205322
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||   | ||| |||||||||||||||| |||||    
T  21205249 atgattatgataaagactaatccc-ttatcttagatgaagattaattccaacttaggcttcaatttagctcctaa 21205322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 11343008 - 11343081
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagccccta 352  Q
    |||||||||||||| ||||||||||||||||| || ||||||||  || |||||  ||||||||| ||| ||||    
T  11343008 atgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctccta 11343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 21310790 - 21310709
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| |||| ||||||||||||    
T  21310790 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 29918131 - 29918212
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| |||| || |||||||||||||| | |||||||||||||||    
T  29918131 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 18531018 - 18530946
Alignment:
Q  281 gattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||||||||| |||||| |||||    
T  18531018 gattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaa 18530946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 10778059 - 10777968
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  10778059 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 10777968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 11212038 - 11211983
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||| | ||||||||||||||||||  |||||||||||||||||    
T  11212038 catgagaaaatgcaaaaattgaacatgattatgataataactaacccccttacctt 11211983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 21932354 - 21932299
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  21932354 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 21932299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 21938524 - 21938469
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  21938524 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 21938469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 314
Target Start/End: Complemental strand, 22053785 - 22053750
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagat 314  Q
    ||||||||||| ||||||||||||||||||||||||    
T  22053785 atgattatgatgaagactaacccccttaccttagat 22053750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 35582319 - 35582374
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  35582319 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 35582374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 9730347 - 9730277
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttag 312  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| ||||||||||||||||||||||    
T  9730347 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttag 9730277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 19862375 - 19862456
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||||||||| | || ||||||||||||    
T  19862375 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaattt 19862456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 27010144 - 27010189
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||    
T  27010144 acatgattgtgataataactaacccccttaccttagaagaagatta 27010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 352; Significance: 0; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 16 - 387
Target Start/End: Complemental strand, 16328135 - 16327764
Alignment:
Q  16 tcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcat 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16328135 tcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcat 16328036  T
Q  116 tttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16328035 tttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaac 16327936  T
Q  216 aattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatg 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16327935 aattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttatatg 16327836  T
Q  316 aagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  16327835 aagattaggccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 16327764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 10488601 - 10488987
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488601 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 10488700  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488701 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 10488800  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  10488801 cacgaatttagcaacaattatccattcattcatttcaactcatttcatccaaatcatgaaaaattgcaaagaatgaacatgattaagataaagaccaacc 10488900  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  10488901 accttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 10488987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 59 - 387
Target Start/End: Original strand, 26680297 - 26680625
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  26680297 aattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 26680396  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatg 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  26680397 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccattccatacaaatcatg 26680496  T
Q  259 aaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaacttt 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||     
T  26680497 aaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctta 26680596  T
Q  359 cccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||||||||||||||||||    
T  26680597 cccaattggattcttcaagttcttctctc 26680625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 78 - 387
Target Start/End: Complemental strand, 13048368 - 13048059
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||||| |||  ||||||| |||||||||| || |||| ||||||| ||||||||||||| ||||||||||||||||| || ||||| |||||||||    
T  13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa 277  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13048268 caaacatatcattgaagttggagcatgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaatgaa 13048169  T
Q  278 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaag 377  Q
    ||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||    
T  13048168 catgatggtgataaagactaacccccttaacttagatgaagattagaccaaacctaggcttcaatttaactcctaagcttacccaattggattcttcaag 13048069  T
Q  378 ttcttctctc 387  Q
    ||||| ||||    
T  13048068 ttcttttctc 13048059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 16609074 - 16608937
Alignment:
Q  250 caaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagccc 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16609074 caaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctc 16608975  T
Q  350 ctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||| |||||||||||||||||||||||||||||||||    
T  16608974 ctaagctttcccaattggattcttcaagttcttctctc 16608937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 122020 - 122152
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||| |||||||||||||||||||||    
T  122120 agttggagcacaaatttagcaacaattatccat 122152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 15675221 - 15675090
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  15675221 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 15675122  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    ||||||||||||||||||||||||||||||||    
T  15675121 agttggagcacgaatttagcaacaattatcca 15675090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 10104382 - 10104251
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  10104382 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 10104283  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    |||||||||||| |||||||||||||||||||    
T  10104282 agttggagcacggatttagcaacaattatcca 10104251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 93 - 353
Target Start/End: Original strand, 13246561 - 13246811
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||     
T  13246561 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcac 13246660  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||||| |||||||||||| ||||||||||||||| || ||    ||   | ||||| |||    |||||| || |||  |||||  ||||||||||||||    
T  13246661 agttgtagcacgaatttaacaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaa 13246750  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||| |||||||  || ||| |||||||||||||||| |||||    
T  13246751 gactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 13246811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 54118340 - 54118243
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  54118340 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccatt 54118243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 255 - 387
Target Start/End: Original strand, 20001006 - 20001138
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| |||||     
T  20001006 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaag 20001105  T
Q  355 ctttcccaattggattcttcaagttcttctctc 387  Q
    ||| |||||||||||||||||||||||||||||    
T  20001106 cttacccaattggattcttcaagttcttctctc 20001138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 31115764 - 31115865
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  31115764 aattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagtt 31115863  T
Q  197 gg 198  Q
    ||    
T  31115864 gg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 33240890 - 33240962
Alignment:
Q  152 atacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcca 224  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33240890 atacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatcca 33240962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 209
Target Start/End: Original strand, 10644336 - 10644467
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| || ||||||||||||||||| |||||||||||||||    
T  10644336 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcata 10644435  T
Q  178 caaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||| ||||| ||   ||||||||||||    
T  10644436 caaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 26339327 - 26339434
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagtt 379  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  26339327 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 26339426  T
Q  380 cttctctc 387  Q
    ||||||||    
T  26339427 cttctctc 26339434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 47357771 - 47357906
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||| ||||||||    
T  47357771 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcata 47357870  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| ||   ||||||||||||||||    
T  47357871 caaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 15135939 - 15135830
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| ||||| ||  |||||| | ||||| |||||    
T  15135939 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 15135840  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  15135839 ctcttctctc 15135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 15272243 - 15272134
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| ||||| ||  |||||| | ||||| |||||    
T  15272243 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 15272144  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  15272143 ctcttctctc 15272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26680071 - 26680142
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaac 72  Q
    |||||||  |||||| |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26680071 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 26680142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 40885650 - 40885570
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| |||||||| ||| ||||||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885650 aacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 55376525 - 55376452
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||| |||||||||||||||||||||||| | ||| |  |||||| |||||||||||||||| |||||    
T  55376525 tgattatgatgaagactaacccccttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaa 55376452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 122194 - 122262
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    |||||||||||||||||||| ||||||||||||||| |||||||  || ||| ||| ||||||||||||    
T  122194 atgattatgataaagactaatccccttaccttagataaagattaatcccaacttagacttcaatttagc 122262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 9795453 - 9795566
Alignment:
Q  198 gagcacgaattt-agcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagact 296  Q
    |||||||||||| | ||||||||||| ||||||||   |||||||||||||| |||  ||||| ||| || ||| | |||||||||||||||| |  |||    
T  9795453 gagcacgaattttaacaacaattatcaattcattccaatcaacccatttcatacaa--catgagaaaatgaaaaaattgaacatgattatgatgataact 9795550  T
Q  297 aacccccttaccttag 312  Q
    ||||||||||||||||    
T  9795551 aacccccttaccttag 9795566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 14952085 - 14952128
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  14952085 atgattatgataaagactaacccccttaccttagaagaagatta 14952128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 17145630 - 17145563
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | ||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  17145630 catgagaaaatgcaaaaattgaacatgattatgataataactaacccccttaccttagaagaagatta 17145563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 32460636 - 32460561
Alignment:
Q  278 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||  |||||||||||||||||||||||| | |||||  |||||| ||||||||| |||||| |||||    
T  32460636 catgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 32460561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 386
Target Start/End: Original strand, 14996364 - 14996552
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa--catgattatgataaagac 295  Q
    ||||| ||||||| ||||||||||| ||||||||   |||| ||||||||| |||  || | ||||||||||| ||   |  ||||||||||||||  ||    
T  14996364 gagcaggaatttaacaacaattatcaattcattccaatcaatccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgataataac 14996461  T
Q  296 taacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctct 386  Q
    |||||||||||||||| | ||||||||  ||||||    ||||||||| ||| ||||||||| ||| | | ||||| ||||| | ||||||    
T  14996462 taacccccttaccttaaaagaagattaacccaaactcttgcttcaattcagctcctaaacttaccccaattgattcctcaagctattctct 14996552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 7132038 - 7131971
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  7132038 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 7131971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 15287218 - 15287151
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  15287218 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 15287151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 15294327 - 15294260
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  15294327 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 15294260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 15675065 - 15674967
Alignment:
Q  257 tgaaaaattgcaaaga--atgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||| |  ||||  ||||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||||||||| |||||| |||||    
T  15675065 tgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaa 15674967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 19697391 - 19697277
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaa--agaatgaacatgattatgataaagac 295  Q
    ||||||||||||| ||||||||||| ||||||||   |||||||||||||| |||  || | ||||||||||  | ||  | |||||||||||  || ||    
T  19697391 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgaagaacac 19697294  T
Q  296 taacccccttaccttag 312  Q
    |||||||||||||||||    
T  19697293 taacccccttaccttag 19697277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 19707976 - 19707862
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaa--agaatgaacatgattatgataaagac 295  Q
    ||||||||||||| ||||||||||| ||||||||   |||||||||||||| |||  || | ||||||||||  | ||  | |||||||||||  || ||    
T  19707976 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgaagaacac 19707879  T
Q  296 taacccccttaccttag 312  Q
    |||||||||||||||||    
T  19707878 taacccccttaccttag 19707862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 40885492 - 40885418
Alignment:
Q  278 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagccccta 352  Q
    |||||||||||| ||  |||||||||||||||||||| | |||||  |||||| ||||||||| |||||| ||||    
T  40885492 catgattatgatgaattctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctccta 40885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 7850131 - 7850264
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||||||||| |   ||||  ||||  ||||||||||| ||| || | |||||| ||| ||| |||||||| ||||      
T  7850131 gcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatcacacagttttcatcaatacattcattcaaacataacatctc 7850230  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
      |||||||||||||||| || ||||||| ||||    
T  7850231 cattggagcacgaatttaacagcaattatgcatt 7850264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 7850308 - 7850349
Alignment:
Q  273 atgaacatgattatgataaagactaacccccttaccttagat 314  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  7850308 atgaacatgattatggtgaagactaacccccttaccttagat 7850349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 14500144 - 14500076
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    ||||||||||| ||| |||||||||||||||||||| | |||||  |||||| || |||||| ||||||    
T  14500144 atgattatgatgaagcctaacccccttaccttagataatgattaatccaaacttaagcttcactttagc 14500076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 314
Target Start/End: Original strand, 33240987 - 33241046
Alignment:
Q  257 tgaaaaattgcaaaga--atgaacatgattatgataaagactaacccccttaccttagat 314  Q
    |||||||||||||| |  ||||  ||||||||||| ||||||||||||||||||||||||    
T  33240987 tgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttaccttagat 33241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 353
Target Start/End: Original strand, 8045235 - 8045346
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 341  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| |||||||||||||||||||||| | | |||||   ||||| ||| |||||     
T  8045235 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaattcaaacttagacttcac 8045334  T
Q  342 tttagcccctaa 353  Q
    |||||| |||||    
T  8045335 tttagctcctaa 8045346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 314
Target Start/End: Complemental strand, 10104202 - 10104167
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagat 314  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10104202 atgattatgatgaagactaacccccttaccttagat 10104167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 18169137 - 18169228
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  18169137 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 18169228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 224
Target Start/End: Original strand, 31132545 - 31132576
Alignment:
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    ||||||||||||||||||||||||||||||||    
T  31132545 agttggagcacgaatttagcaacaattatcca 31132576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 16523109 - 16523179
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttag 312  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| ||||||||||||||||||||||    
T  16523109 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttag 16523179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 22352012 - 22351970
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||||||||||  |||||||||||||||||||| ||||||||    
T  22352012 tgattatgataataactaacccccttaccttagaagaagatta 22351970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 353
Target Start/End: Original strand, 22738552 - 22738650
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||| ||| |||||| | ||||  |||||||||| ||||| |||||||||||||||||||| | |||  |  ||| ||||||||| |||||| |||||    
T  22738552 catgagaaaatgcaaaaattgaaattgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 22738650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 18248527 - 18248568
Alignment:
Q  281 gattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||||||  ||||||||||||||||||||||| |||||    
T  18248527 gattatgataataactaacccccttaccttagatgatgatta 18248568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 47357956 - 47358001
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||    
T  47357956 acatgattgtgataataactaacccccttaccttagaagaagatta 47358001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 15044994 - 15045074
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  15044994 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 15045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 314
Target Start/End: Original strand, 31132628 - 31132660
Alignment:
Q  282 attatgataaagactaacccccttaccttagat 314  Q
    |||||||| ||||||||||||||||||||||||    
T  31132628 attatgatgaagactaacccccttaccttagat 31132660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 54118200 - 54118168
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    ||||||||||| |||||||||||||||||||||    
T  54118200 atgattatgatgaagactaacccccttacctta 54118168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 335; Significance: 0; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 51452531 - 51452916
Alignment:
Q  1 atgagatggacatcatcaatcaagtacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51452531 atgagatcaacatcatcaatcaactacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 51452630  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  51452631 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgaag 51452730  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51452731 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaatgaacatgattaagataaagactaacc 51452830  T
Q  301 cccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||||    
T  51452831 cccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcctctctc 51452916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 93 - 387
Target Start/End: Original strand, 45051554 - 45051834
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataa 291  Q
    |||  || ||||||| |||||  |||| | |||          |||||||||| ||| |||  ||||| ||| ||||||  || | ||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcat----------caacccattttcatacaa--catgagaaaatgcaaa--atca-catgattatgataa 45051738  T
Q  292 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  45051739 agactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 45051834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 93 - 387
Target Start/End: Original strand, 2116386 - 2116666
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  2116386 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 2116485  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttc-atccaaatcatgaaaaattgcaaagaatgaacatgattatgataa 291  Q
    |||   ||||||||| |||||  |||| | |||          ||||||||||  || |||  ||||| ||| ||||||  || | ||||||||||||||    
T  2116486 agtaaaagcacgaatctagcatgaattgttcat----------caacccatttttatacaa--catgagaaaatgcaaa--atta-catgattatgataa 2116570  T
Q  292 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
      ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||    
T  2116571 tcactaacccctttaccttaaatgaagattagaccaaacctaggcttcaatttagctcataagctttcccaattggattcttcaagttcttctctc 2116666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 20931461 - 20931608
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||||||||| ||||||| ||||||   |||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  20931461 aaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 20931560  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  20931561 caaacatatcatcacagttggagcacgaatttagcaacaattatccat 20931608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 20913161 - 20913291
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||||||||| ||||||| ||||||   |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  20913161 gcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 20913260  T
Q  193 agttggagcacgaatttagcaacaattatcc 223  Q
    |||||||||||||||||||||||||||||||    
T  20913261 agttggagcacgaatttagcaacaattatcc 20913291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 41394353 - 41394485
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  ||||||||| || |||||||||||||||||||| ||||||| |||||||||||||||||||||     
T  41394353 gcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcat 41394452  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||| ||||||    
T  41394453 agttggagcacgaatttagcaacaatcatccat 41394485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 129 - 353
Target Start/End: Complemental strand, 37844546 - 37844332
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattca 228  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccatt-a 37844448  T
Q  229 ttcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaa 328  Q
    | ||    ||   | ||||| |||  |||   ||| | || | |||||  |||||||||||||||||||||||||||||||||||| || ||||  || |    
T  37844447 tgca----aa---aattcatacaa--catttgaaaattcacaaaatgatgatgattatgataaagactaacccccttaccttagataaaaattaatccca 37844357  T
Q  329 acctaggcttcaatttagcccctaa 353  Q
    || |||||||||||||||| |||||    
T  37844356 acttaggcttcaatttagctcctaa 37844332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 345
Target Start/End: Original strand, 20445846 - 20446053
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattca 228  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |    
T  20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccatt-a 20445944  T
Q  229 ttcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaa 328  Q
    | ||    ||   | ||||| |||    |||||| || || | |||||  ||||||||||||||||||||| |||||||||||||| |||||||  || |    
T  20445945 tgca----aa---aattcatacaacatttgaaaattt-cacaaaatgatgatgattatgataaagactaactcccttaccttagataaagattaatccca 20446036  T
Q  329 acctaggcttcaattta 345  Q
    || ||||||||||||||    
T  20446037 acttaggcttcaattta 20446053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 20893758 - 20893625
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||     
T  20893758 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 20893659  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||| |||||||||||||||||||||||    
T  20893658 agttggagcaagaatttagcaacaattatccatt 20893625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 20531611 - 20531708
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccatt 20531708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 7640882 - 7640775
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagtt 379  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  7640882 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 7640783  T
Q  380 cttctctc 387  Q
    ||||||||    
T  7640782 cttctctc 7640775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 22227941 - 22228066
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  22227941 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22228040  T
Q  194 gttggagcacgaatttagcaacaatt 219  Q
    |   ||||||||||||||||| ||||    
T  22228041 gcaagagcacgaatttagcaagaatt 22228066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 22232638 - 22232763
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  22232638 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22232737  T
Q  194 gttggagcacgaatttagcaacaatt 219  Q
    |   ||||||||||||||||| ||||    
T  22232738 gcaagagcacgaatttagcaagaatt 22232763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 387
Target Start/End: Original strand, 46523691 - 46523803
Alignment:
Q  275 gaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttc 374  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    |||| |||||| | ||||| ||| ||||||||||||||||    
T  46523691 gaacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgctttaatttatctcctaagcttacccaattggattcttc 46523790  T
Q  375 aagttcttctctc 387  Q
    |||||||||||||    
T  46523791 aagttcttctctc 46523803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 22035755 - 22035862
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagtt 379  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||| ||||| ||| |||||||||||||||||||||    
T  22035755 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagcttacccaattggattcttcaagtt 22035854  T
Q  380 cttctctc 387  Q
    ||||||||    
T  22035855 cttctctc 22035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 20893583 - 20893509
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| |||||||||||||||||||||| | |||||||  || ||| |||||||||||||||| |||||    
T  20893583 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 20893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 20913335 - 20913409
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||| |||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| |||||    
T  20913335 atgattacgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 20913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 20931650 - 20931718
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    ||||||||||||||| |||||||||||||||||||| |||||||  || ||| ||||||||| ||||||    
T  20931650 atgattatgataaaggctaacccccttaccttagataaagattaatcccaacttaggcttcactttagc 20931718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 20531751 - 20531817
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    ||||||||||||||||||||   ||||||||||||| |||||||  || ||| ||||||||||||||    
T  20531751 atgattatgataaagactaatttccttaccttagataaagattaatcccaacttaggcttcaattta 20531817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 41394527 - 41394559
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||||||||||||||||||||||    
T  41394527 atgattatgataaagactaacccccttacctta 41394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 310
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  279 atgattatgataaagactaacccccttacctt 310  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 17004921 - 17004976
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  17004921 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 17004976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 19962472 - 19962417
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  19962472 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 19962417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 38055054 - 38055009
Alignment:
Q  265 tgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    |||||||| || |||||||||||||||  |||||||||||||||||    
T  38055054 tgcaaagattgtacatgattatgataataactaacccccttacctt 38055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 21860334 - 21860366
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  21860334 atgattatgataaaaactaacccccttacctta 21860366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 44034903 - 44034871
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  44034903 atgattatgataaaaactaacccccttacctta 44034871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 297; Significance: 1e-167; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 63 - 387
Target Start/End: Complemental strand, 37228 - 36904
Alignment:
Q  63 caacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt 162  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37228 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt 37129  T
Q  163 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 37029  T
Q  263 attgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttccca 362  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  37028 attgtaaggaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttaccca 36929  T
Q  363 attggattcttcaagttcttctctc 387  Q
    |||||||||||||||||||||||||    
T  36928 attggattcttcaagttcttctctc 36904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 37442 - 37391
Alignment:
Q  17 caatcaagtacaatcataacatataatcataccctccatcataattcaacaa 68  Q
    |||||||  ||||||| ||||||||||||||| |||||||||||||||||||    
T  37442 caatcaaccacaatcacaacatataatcatacactccatcataattcaacaa 37391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 93 - 387
Target Start/End: Original strand, 5660 - 5953
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| ||||| |||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  5760 agttggagcacgaatttagcaacaattattcattcattcgtttcaatccatttcatacaaatcatgaaaaattgtaaagaatgaacatgattatggtaaa 5859  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||| |||||||||||||||    
T  5860 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttacccaatt-gattcctcaagttcttctctc 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 53 - 345
Target Start/End: Original strand, 13596 - 13890
Alignment:
Q  53 catcataattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatc 151  Q
    ||||||||||||||||||||||  |||| |||||| |||  |||||||||||| |||||  |||||| ||||| |  |||||||||||| ||||||||||    
T  13596 catcataattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatc 13695  T
Q  152 atacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatcc 250  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |    
T  13696 atacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatac 13795  T
Q  251 aaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    ||   |||| |||||||||  ||| |||||||||||||| |||||||||||||||||||||||| | |||||  |||||| ||||||||| ||||    
T  13796 aacaaatgagaaattgcaataaataaacatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcacttta 13890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 53 - 347
Target Start/End: Complemental strand, 35009612 - 35009316
Alignment:
Q  53 catcataattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatc 151  Q
    ||||||||||||||||||||||  |||| |||| | |||  |||||||||||| |||||  |||||| ||||| |  |||||||||||| ||||||||||    
T  35009612 catcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatc 35009513  T
Q  152 atacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatcc 250  Q
    |||||||||| |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||  |||| |||||||||| ||||| |    
T  35009512 atacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccatttcttcaattcaacccatattcatac 35009413  T
Q  251 aaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    ||   |||| |||||||||  |||||||||||||||||| ||||||||||||||||| |||||| | |||||  |||||| | ||||||| ||||||    
T  35009412 aacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttactttagataatgattaatccaaactttggcttcactttagc 35009316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 322
Target Start/End: Complemental strand, 1657880 - 1657650
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| |||| |||||||||||||||||||| |||||||||||||| |||||||| |||||     
T  1657880 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcac 1657781  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataa 291  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||   |||| |||||||||  |||||||||||||||||| |    
T  1657780 agttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 1657681  T
Q  292 agactaacccccttaccttagatgaagatta 322  Q
    |||||||||||||||||||||| ||||||||    
T  1657680 agactaacccccttaccttagaagaagatta 1657650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 93 - 387
Target Start/End: Complemental strand, 1650225 - 1649945
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||| | |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  1650225 gcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 1650126  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataa 291  Q
    |||  |||||||||| |||||  |||| | |||          |||||||||| ||| |||  ||||| ||| ||||||  || | ||||||||||||||    
T  1650125 agtaagagcacgaatctagcatgaattgttcat----------caacccattttcatacaa--catgagaaaatgcaaa--atta-catgattatgataa 1650041  T
Q  292 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaagttcttctctc 387  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  1650040 agactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctctc 1649945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 93 - 322
Target Start/End: Original strand, 15862602 - 15862832
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||  ||||| |  ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  15862602 gcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 15862701  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataa 291  Q
    |||| |||||||||||||| |||||||||||||| ||||| |||||||||| ||||| |||   |||| |||||||||  |||||||||||||||||| |    
T  15862702 agttagagcacgaatttagtaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 15862801  T
Q  292 agactaacccccttaccttagatgaagatta 322  Q
    |||||||||||||||||||||| ||||||||    
T  15862802 agactaacccccttaccttagaagaagatta 15862832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 142 - 353
Target Start/End: Original strand, 27751605 - 27751816
Alignment:
Q  142 accaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaaccc 241  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| ||||||||| ||||| ||||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccatttattcaattcaaccc 27751704  T
Q  242 at-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttca 340  Q
    || ||||| || |  |||| |||||||||  |||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||| |||||||||    
T  27751705 atattcatacaca-aatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttca 27751803  T
Q  341 atttagcccctaa 353  Q
    ||||||| |||||    
T  27751804 atttagctcctaa 27751816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 93 - 353
Target Start/End: Original strand, 23153578 - 23153828
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  23153578 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23153677  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    ||||||||||||||||||| |||||||||||||| || ||    ||   | ||||| |||    |||||| || |||  |||||  ||||||||||| ||    
T  23153678 agttggagcacgaatttagaaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgatgaa 23153767  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||| | |||||||  || ||| |||||||||||||||| |||||    
T  23153768 gactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 23153828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 94 - 225
Target Start/End: Complemental strand, 14626249 - 14626118
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  14626249 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 14626150  T
Q  194 gttggagcacgaatttagcaacaattatccat 225  Q
    |   ||||||||||||||||| ||||||||||    
T  14626149 gcaagagcacgaatttagcaataattatccat 14626118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 387
Target Start/End: Original strand, 29666040 - 29666290
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| |||||||||||||       
T  29666040 aaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcca--- 29666136  T
Q  228 attcatttcaaccca-tttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 326  Q
           ||| |||| |||||| | ||  |||| |||||||||  | |||||||||||||||| ||||||||||| ||||  |||||| | |||||  ||    
T  29666137 -------tcaccccattttcatac-aacaatgagaaattgcaataattgaacatgattatgatgaagactaacccacttatgttagataatgattaatcc 29666228  T
Q  327 aaacctaggcttcaatttagcccctaaact-ttcccaattggattcttcaagttcttctctc 387  Q
    |||| |||||||||||||||| ||||| ||   ||||||| ||||||||||| |||||||||    
T  29666229 aaacttaggcttcaatttagctcctaagctcaccccaatttgattcttcaagctcttctctc 29666290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 255 - 387
Target Start/End: Original strand, 23978052 - 23978184
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||| ||||||||||||| ||||||||  ||||||    ||||||||||||| |||||     
T  23978052 catgagaaaatgcaaaaattgtacatgattatgataataactaacgcccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaag 23978151  T
Q  355 ctttcccaattggattcttcaagttcttctctc 387  Q
    ||| |||||||||||||||||||||||||||||    
T  23978152 cttacccaattggattcttcaagttcttctctc 23978184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 25175680 - 25175815
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  25175680 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25175779  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| || || ||   ||||||||||||||||    
T  25175780 caaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 27654118 - 27653983
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  27654118 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 27654019  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    ||| |||| ||||| ||   ||||||||||||||||    
T  27654018 caagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 23995247 - 23995356
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| ||||| ||  |||||| | ||||| |||||    
T  23995247 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 23995346  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  23995347 ctcttctctc 23995356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 16825879 - 16825752
Alignment:
Q  88 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatca--tacaattattatcaattcatgcatacaaacata 185  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |  ||||| ||  |||||||||||||||||||||||    
T  16825879 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacata 16825780  T
Q  186 tcatcaaagttggagcacgaatttagca 213  Q
     ||||| ||   ||||||||||||||||    
T  16825779 acatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 16299999 - 16299844
Alignment:
Q  198 gagcacgaattt-agcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa-catgattatgataaagac 295  Q
    |||||||||||| | ||||||||||| ||||||||   |||||||||||||| |||  || | ||||||||||| ||  || |||||||| ||  |||||    
T  16299999 gagcacgaattttaacaacaattatcaattcattctaatcaacccatttcatacaa--caaggaaaattgcaaacaaacaatcatgattaagaagaagac 16299902  T
Q  296 taacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||| | | |||||  |||||| ||||||||| |||||| |||||    
T  16299901 taacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 16299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 23148303 - 23148377
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| |||||||||||||||||||||| | |||||||  || ||| |||||||||||||||| |||||    
T  23148303 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 23148377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 15742150 - 15742077
Alignment:
Q  281 gattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    |||||||||||||||||||||||||||||||| | | |||||  |||||| ||||||||| |||||| ||||||    
T  15742150 gattatgataaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaaa 15742077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 387
Target Start/End: Original strand, 19610323 - 19610433
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaa 376  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||| ||||| ||| ||| | | ||||| ||||    
T  19610323 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaa 19610422  T
Q  377 gttcttctctc 387  Q
    | |||||||||    
T  19610423 gctcttctctc 19610433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 32276691 - 32276617
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| || |||||| |||||| |||||    
T  32276691 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 32276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 322
Target Start/End: Original strand, 1556172 - 1556355
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | |||      
T  1556172 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcat-- 1556269  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
            |||||||||| ||| |||  ||||| ||| |||||| | |||||||||||||||| |  |||||||||||||||||||| ||||||||    
T  1556270 --------caacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagatta 1556355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 322
Target Start/End: Original strand, 16232059 - 16232242
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||| | |||      
T  16232059 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcat-- 16232156  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
            |||||||||| ||| |||  ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  16232157 --------caacccattttcatacaa--catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 16232242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 18002427 - 18002352
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    |||||||||||||||||||||||||||||||||| | | |||||  | |||| ||| ||||| |||||| ||||||    
T  18002427 atgattatgataaagactaacccccttaccttaggttatgattaatctaaacttagccttcactttagctcctaaa 18002352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 18629689 - 18629608
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
T  18629689 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 347
Target Start/End: Complemental strand, 18839207 - 18839102
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 341  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| |||||||||||||||||||||| | | |||||  |||||| || ||||||     
T  18839207 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaagcttcac 18839108  T
Q  342 tttagc 347  Q
    ||||||    
T  18839107 tttagc 18839102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 26090059 - 26090092
Alignment:
Q  279 atgattatgataaagactaacccccttaccttag 312  Q
    ||||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttaccttag 26090092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 29605616 - 29605696
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| ||||||||  || ||||||| |  ||||||||||| ||||||||||| || | || ||||||||||||    
T  29605616 aacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatcaccataattagagcacgaattt 29605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 310
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  279 atgattatgataaagactaacccccttacctt 310  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 10488982 - 10489037
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  10488982 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 10489037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 16376346 - 16376291
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  16376346 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 16383670 - 16383615
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  16383670 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 16556112 - 16556057
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  16556112 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16556057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 16632668 - 16632613
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  16632668 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16632613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 16887847 - 16887792
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| ||||||||||||||||| |||| |||| ||||||||||||    
T  16887847 caattatcatcaatttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 17083271 - 17083200
Alignment:
Q  136 aatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 207  Q
    ||||| ||||||||  || ||||||| | |||||||||||| |||||||||||||| | || ||||||||||    
T  17083271 aatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatcatcataattagagcacgaat 17083200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 353
Target Start/End: Complemental strand, 18823352 - 18823241
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 341  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| |||||||||||||||||||||| | | |||||  |||||| ||  |||||     
T  18823352 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaaacttcac 18823253  T
Q  342 tttagcccctaa 353  Q
    |||||| |||||    
T  18823252 tttagctcctaa 18823241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 19299520 - 19299575
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  19299520 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 19299575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 35136068 - 35136013
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| |||||||||||||||||||||  |||| ||||||||||||    
T  35136068 caattatcatcaatttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 19629567 - 19629617
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcat 248  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||    
T  19629567 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcat 19629617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 13620767 - 13620710
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttag 312  Q
    ||||| ||| |||||| | || ||||||||||||  ||||||||||||||||||||||    
T  13620767 catgagaaaatgcaaaaattgtacatgattatgaagaagactaacccccttaccttag 13620710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 19983224 - 19983192
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  19983224 atgattatgataaaaactaacccccttacctta 19983192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 29869724 - 29869684
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagat 320  Q
    ||||||||||||  |||||||||||||||||||| ||||||    
T  29869724 tgattatgataataactaacccccttaccttagaagaagat 29869684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 35015089 - 35015057
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||| ||||||||||||||||||    
T  35015089 atgattatgataaaaactaacccccttacctta 35015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 53 - 353
Target Start/End: Original strand, 41738 - 42039
Alignment:
Q  53 catcataattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatc 151  Q
    ||||||||||||||||||||||  |||| |||| | |||   ||||||||||| |||||  |||||| ||||| |  |||||||||||| ||||||||||    
T  41738 catcataattcaacaacaacatagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatc 41837  T
Q  152 atacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatcc 250  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||| ||||| |||||||||| ||||| |    
T  41838 atacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccatttattcaattcaacccatattcatac 41937  T
Q  251 aaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccc 350  Q
     ||  |||| |||||| ||  |||||||||||||||||| |||||||||||||||||||||| | | |||||  |||||| ||||||||| |||||| ||    
T  41938 -aacaatgagaaattgaaataaatgaacatgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcc 42036  T
Q  351 taa 353  Q
    |||    
T  42037 taa 42039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 122; Significance: 2e-62; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 93 - 352
Target Start/End: Complemental strand, 8312 - 8051
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  ||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||     
T  8312 gcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcac 8213  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataa 291  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||   |||| |||||||||  |||||||||||||||||| |    
T  8212 agttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 8113  T
Q  292 agactaa-cccccttaccttagatgaagattagaccaaacctaggcttcaatttagccccta 352  Q
    ||||||| |||||||||||||||| | |||||  |||||| ||||||||| |||||| ||||    
T  8112 agactaaccccccttaccttagataatgattaatccaaacttaggcttcattttagctccta 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 95 - 353
Target Start/End: Complemental strand, 26545 - 26298
Alignment:
Q  95 acaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaag 194  Q
    |||||||||| ||||| ||||||| |||||||  |||||||| ||| ||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  26545 acaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaag 26446  T
Q  195 ttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaaga 294  Q
    ||||||||||||||||||||||||||| |||| ||  |         | ||||| |||    |||||| || |||  ||||| |||||||||||||||||    
T  26445 ttggagcacgaatttagcaacaattatacatt-atgaa--------aaattcatacaacatttgaaaatttacaa--aatgatcatgattatgataaaga 26357  T
Q  295 ctaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||  || | | |||||||||||||||| |||||    
T  26356 ctaacccccttaccttagatgaagattaatcccatcttaggcttcaatttagctcctaa 26298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 375
Target Start/End: Original strand, 11989 - 12160
Alignment:
Q  205 aatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaaccccct 304  Q
    |||||| ||||||||||| |||||||    ||||||| |||||| |||   | || || ||||||  | |||||||||||||||| ||||||||||||||    
T  11989 aatttaacaacaattatcaattcattgcaatcaacccgtttcatacaacaaaggagaagttgcaataattgaacatgattatgatgaagactaaccccct 12088  T
Q  305 taccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactt-tcccaattggattcttca 375  Q
    || ||||||| | |||||  |||||| | |||||||||||||| ||||| |||  ||||||| |||||||||    
T  12089 tatcttagataatgattaatccaaactttggcttcaatttagctcctaagcttaccccaatttgattcttca 12160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 129 - 312
Target Start/End: Complemental strand, 34556 - 34372
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattca 228  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||    
T  34556 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccattca 34457  T
Q  229 ttcatttcaacccat-ttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttag 312  Q
    |||| |||||||||| ||||| |||   |||| |||||||||  ||||||||||||||||||||  |||||||| ||||||||||    
T  34456 ttcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgataataactaaccctcttaccttag 34372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 105; Significance: 2e-52; HSPs: 3)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 1255 - 1387
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1255 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaa 1354  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  1355 agttggagcacgaatttagcaacaattatccat 1387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 93 - 353
Target Start/End: Complemental strand, 3714 - 3466
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  3714 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 3615  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||||||||||||||||||||||||| ||  | |||         | ||||| ||| |  |||||| || |||  |||||| |||||||||| |||    
T  3614 agttggagcacgaatttagcaacaattatctat--aatca--------aaattcatacaacttttgaaaatttacaa--aatgaagatgattatgacaaa 3527  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| |||||    
T  3526 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 1430 - 1504
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |  ||| ||||||||| |||||| |||||    
T  1430 atgattatgataaagactaacccccttaccttagataaagattaatcacaacttaggcttcactttagctcctaa 1504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 1103 - 956
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||||| |||  |||||||||||| ||||| | ||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  1103 aaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 1004  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1003 caaacatatcatcacagttggagcacgaatttagcaacaattatccat 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 919 - 871
Alignment:
Q  274 tgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  919 tgaagatgattatgataaagactaacccccttaccttagaagaagatta 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 93 - 312
Target Start/End: Original strand, 48318 - 48537
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  48318 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 48417  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa--catgattatgata 290  Q
    |||||||||||||||||||||||||||||| ||||||||    ||||||||||||| |||  || | ||||||||||| ||   |  |||||||||||      
T  48418 agttggagcacgaatttagcaacaattatcaattcattccaaccaacccatttcatacaa--caaggaaaattgcaaacaaaacattcatgattatgaag 48515  T
Q  291 aagactaacccccttaccttag 312  Q
    ||||||||||||||||| ||||    
T  48516 aagactaacccccttacattag 48537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 19337 - 19470
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  19337 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 19436  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  19437 agttggagcacgaatttagcaacaattatccatt 19470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 21421 - 21553
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  21421 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 21520  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  21521 agttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 12229 - 12376
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||| ||| ||| ||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  12229 aaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcata 12328  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  12329 caaacatatcatcacagttagagcacgaatttagcaacaattatccat 12376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 12418 - 12492
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||||||||  ||||||  || ||| ||||||||| |||||| |||||    
T  12418 atgattatgataaagactaacccccttaccttagatagagattaatcctaacttaggcttcactttagctcctaa 12492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 6196 - 6064
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||| | ||||| | ||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  6196 gcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 6097  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  6096 agttggagcacgaatttagcaacaattatccat 6064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 6027 - 5987
Alignment:
Q  274 tgaacatgattatgataaagactaacccccttaccttagat 314  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  6027 tgaaaatgattatgataaagactaacccccttaccttagat 5987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 37060 - 36912
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||| | ||||||||| |||||||||||||||    
T  37060 aaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcata 36961  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  36960 caaacatatcatcacagttggagcacgaatttaacaacaattatccatt 36912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 36869 - 36808
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttca 340  Q
    ||||||||||||||||||||||||||||||||| || |||||||  || ||| |||||||||    
T  36869 atgattatgataaagactaacccccttaccttaaataaagattaatcccaacttaggcttca 36808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 93; Significance: 3e-45; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 48729 - 48861
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| |||||||  | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  48729 gcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 48828  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  48829 agttggagcacgaatttagcaacaattatccat 48861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 36210 - 36323
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   || ||||||||| |||||||||||||||| ||  |||||||||| ||||    
T  36210 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacata 36309  T
Q  178 caaacatatcatca 191  Q
    |||||||| |||||    
T  36310 caaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 153980 - 153913
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  153980 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 153913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 48903 - 48936
Alignment:
Q  279 atgattatgataaagactaacccccttaccttag 312  Q
    ||||||||||||||||||||||||||||||||||    
T  48903 atgattatgataaagactaacccccttaccttag 48936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 61191 - 61121
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttag 312  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| ||||||||||||||||||||||    
T  61191 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttag 61121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 89; Significance: 8e-43; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 51314 - 51182
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| || ||||  |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  51214 agttggagcacgaatttagcaacaattatccat 51182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 51140 - 51066
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||| | |||||||| |||| |||||||  || ||| |||||||||||||||| |||||    
T  51140 atgattatgataaagactaatctccttacctaagataaagattaatcccaacttaggcttcaatttagctcctaa 51066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 88; Significance: 3e-42; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 8980 - 9111
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  8980 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 9079  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    || |||||||||||||||||||||||||||||    
T  9080 agatggagcacgaatttagcaacaattatcca 9111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 93 - 222
Target Start/End: Original strand, 148852 - 148981
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  148852 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 148951  T
Q  193 agttggagcacgaatttagcaacaattatc 222  Q
    ||||||||||| |||||| |||||||||||    
T  148952 agttggagcacaaatttaacaacaattatc 148981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 146906 - 146980
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| |||||||||||||||| |||||    
T  146906 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 146980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 630 - 533
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  630 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccatt 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 123296 - 123163
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  123296 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 123197  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    | ||||||||||||||||||||||||||||||||    
T  123196 aattggagcacgaatttagcaacaattatccatt 123163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 123119 - 123045
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||| | |||||||||||||||||||||| | |||||||  || ||| |||||||||||||||| |||||    
T  123119 atgattatggtgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 123045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 93 - 353
Target Start/End: Complemental strand, 247574 - 247324
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||| ||||| |||  ||||||||||||||| ||||||||||||||||||||||||||| |     
T  247574 gcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattac 247475  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |||||||||||||||||||||||||||||||||| || ||    ||   | ||||| |||    |||||| || |||  |||||  ||||||||||||||    
T  247474 agttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaa 247385  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||| |||||||  || ||| |||||||||||||||| |||||    
T  247384 gactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 353
Target Start/End: Complemental strand, 34150 - 34033
Alignment:
Q  235 tcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctag 334  Q
    |||||||||||||| |||   |||| ||| |||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||        
T  34150 tcaacccatttcatacaaca-atgagaaaatgcaaaaattgaacatgattatgatgaagactaacccccttaccttagatgaagattaacccaaactctt 34052  T
Q  335 gcttcaatttagcccctaa 353  Q
    ||||||||||||| |||||    
T  34051 gcttcaatttagctcctaa 34033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 129 - 345
Target Start/End: Complemental strand, 128265 - 128061
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattca 228  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||        
T  128265 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatcca---- 128170  T
Q  229 ttcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaa 328  Q
          | | |  | ||||| ||| |  |||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||| |||||||  || |    
T  128169 ------taagcaaaattcatacaacttttgaaaatttgcaa--aatgaagatgattatgataaagactaacccccttaccttagataaagattaatccca 128078  T
Q  329 acctaggcttcaattta 345  Q
    || ||||||||| ||||    
T  128077 acttaggcttcatttta 128061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 191  Q
    |||||||||| |||||||  |||||   || ||||||||| |||||||||||||||| ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 5193 - 5060
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||| ||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||     
T  5193 gcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcac 5094  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||| |||||||||||||||||||||||||    
T  5093 agttggagtacgaatttagcaacaattatccatt 5060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 1e-38; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 89550 - 89453
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  89550 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccatt 89453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 107835 - 107783
Alignment:
Q  174 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccatt 107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 89410 - 89344
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||  || ||| ||||||||||||||    
T  89410 atgatcatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcaattta 89344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 107740 - 107674
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||  || ||| ||||||||||||||    
T  107740 atgatcatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcaattta 107674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 79731 - 79786
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| | ||||||||||    
T  79731 caattatcatcaatttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 310
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  279 atgattatgataaagactaacccccttacctt 310  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 41860 - 41992
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || ||||||| |||||||  | |||||||||| |||||||||   |||||||| |||||||||||||||||||||||||||||     
T  41860 gcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcac 41959  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  41960 agttggagcacgaatttagcaacaattatccat 41992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 42034 - 42100
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    ||||||||||||||||| |||||||||||||||||| || ||||  || ||| ||| ||||||||||    
T  42034 atgattatgataaagaccaacccccttaccttagataaatattaatcccaacttagacttcaattta 42100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 132 - 353
Target Start/End: Original strand, 3360 - 3578
Alignment:
Q  132 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattc 231  Q
    ||||||||| |||||||||||||||| ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||||||||||| ||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccatttattc 3459  T
Q  232 atttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacc 331  Q
    |  ||||||||||||| |  ||  | || |||||||||  |||||||||||||||||  |||| ||| ||||||||||||||||| |||||   |||||     
T  3460 a-atcaacccatttca-cataacaaggagaaattgcaataaatgaacatgattatgaggaagaataa-ccccttaccttagatgatgattaattcaaact 3556  T
Q  332 taggcttcaatttagcccctaa 353  Q
    ||||||||| |||||| |||||    
T  3557 taggcttcactttagctcctaa 3578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 76; Significance: 5e-35; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 172021 - 172168
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  172021 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccata 172120  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  172121 caaacatatcatcacagttggagcacgtatttagcaacagttatccat 172168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 177724 - 177871
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  177724 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccata 177823  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  177824 caaacatatcatcacagttggagcacgtatttagcaacagttatccat 177871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 172210 - 172284
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| |||||    
T  172210 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 172284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 177913 - 177987
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| |||||    
T  177913 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 177987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 93 - 353
Target Start/End: Original strand, 9009 - 9257
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||| |||||     
T  9009 gcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcac 9108  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaa 292  Q
    |  |||||||||||||||||||||||| ||||          | | |  | ||| | ||| |  |||||| ||||||  |||||| ||||||||||||||    
T  9109 aaatggagcacgaatttagcaacaattttcca----------taagcaaaattcgtacaacttttgaaaatttgcaa--aatgaagatgattatgataaa 9196  T
Q  293 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| |||||    
T  9197 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 9257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 107878 - 108004
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||| | ||||| |||||||  || |||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  107878 gcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 107977  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||||||||| |||||||    
T  107978 agttggagcacgaatttagtaacaatt 108004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatc-----aattcatgcatacaaacatatc 187  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  188 atcaaagttggagcacgaattt 209  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 210  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 64472 - 64427
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||    
T  64472 acatgattgtgataataactaacccccttaccttagaagaagatta 64427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 387
Target Start/End: Complemental strand, 56196 - 55936
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| | | |||||||||||||||| ||||| ||||||| || || ||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  56196 aaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatctattc 56097  T
Q  228 attcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacca 327  Q
    ||||   |||||| ||||||| |||     || || ||||||  | |||||||||||||||| |||||||||||||| ||| ||||| | |||||  |||    
T  56096 attccaatcaaccaatttcatacaacaagggagaagttgcaataattgaacatgattatgatgaagactaaccccctgaccgtagataatgattaatcca 55997  T
Q  328 aacctaggcttcaatttagcccctaaact-ttcccaattggattcttcaagttcttctctc 387  Q
    ||| ||||||| |||||| | |||||  |   ||||||| ||||||||||| |||||||||    
T  55996 aacttaggctttaatttatctcctaagttcaccccaatttgattcttcaagctcttctctc 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  193 agttggagcacgaatttagca 213  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 167 - 283
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| | |||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 387
Target Start/End: Original strand, 336 - 446
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaattggattcttcaa 376  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||| ||||| ||| ||| | | ||||| ||||    
T  336 acatgattttgataataactaacccccttaccttagaagaagattaatccaaactctcgcttcaattcagctcctaagcttaccccaattgattcctcaa 435  T
Q  377 gttcttctctc 387  Q
    | ||| |||||    
T  436 gctctcctctc 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 3094 - 3220
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||     
T  3094 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcac 3193  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    ||   ||||||||||||||||| ||||    
T  3194 agcaagagcacgaatttagcaagaatt 3220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 63; Significance: 3e-27; HSPs: 4)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 9469 - 9371
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 191  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  9469 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 16367 - 16269
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 191  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  16367 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 9299 - 9223
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||| ||||||  ||||||||||||||||||||||| | |||  |  ||| ||||||||| |||||| |||||    
T  9299 acatgattgtgataataactaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 9223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 16197 - 16121
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||| ||||||  ||||||||||||||||||||||| | |||  |  ||| ||||||||| |||||| |||||    
T  16197 acatgattgtgataataactaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 43114 - 43226
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| ||||||||||  |||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  43114 aaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 43213  T
Q  178 caaacatatcatc 190  Q
     ||||||| ||||    
T  43214 gaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 39386 - 39441
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  39386 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 39441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 272141 - 272288
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  ||||||||||||  ||| ||||||||||||||| |||||||||| ||||    
T  272141 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcata 272240  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||| | |||||||| ||| ||||||||| | ||||||||    
T  272241 caaacatatcattacagttggagtacgtatttagcaatatttatccat 272288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 272330 - 272398
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagc 347  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| ||||||    
T  272330 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagc 272398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 5335 - 5254
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 175  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||    
T  5335 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 910 - 836
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||| |||||    
T  910 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 9914 - 9840
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||| |||||    
T  9914 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 9840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 191  Q
    ||||||| |||||||||| ||||||| |||||||  |||||||||||| || |||||||||| |||||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 21233 - 21110
Alignment:
Q  96 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 195  Q
    |||| |||||||||| ||||||| |||||||  |||||||||||| || |||||||||| |||||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  196 tggagcacgaatttagcaacaatt 219  Q
      ||||||||||||||||| ||||    
T  21133 aagagcacgaatttagcaagaatt 21110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 347
Target Start/End: Complemental strand, 10428 - 10220
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| ||   |||||||||||||||||||||||| |||      
T  10428 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcat-- 10331  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 326  Q
            |||||||||| ||| |||  ||||| ||| |||||| | |||||||||||||||  ||||| |||||||||||||||||||| |||||  ||    
T  10330 --------caacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttaccttagatgatgattaaccc 10241  T
Q  327 aaacctaggcttcaatttagc 347  Q
     ||| ||||||||| ||||||    
T  10240 caacttaggcttcactttagc 10220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 13317 - 13208
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||| ||||| ||  |||||| | ||||| |||||    
T  13317 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 13218  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  13217 ctcttctctc 13208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 353
Target Start/End: Original strand, 45197 - 45412
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||| |  || ||| ||||| |    | ||||||||||| |||||||||| |||      
T  45197 aaacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcat-- 45294  T
Q  228 attcatttcaacccattt-catccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 326  Q
            |||||||||| ||| |||   |||| |||||||||  | |||||||||||||||| |||||||||||||||||||||||| | | |||  ||    
T  45295 --------caacccattttcatacaaca-atgagaaattgcaataattgaacatgattatgatgaagactaacccccttaccttagataatggttaatcc 45385  T
Q  327 aaacctaggcttcaatttagcccctaa 353  Q
    |||| |||||||||||| ||| |||||    
T  45386 aaacttaggcttcaattaagctcctaa 45412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 54701 - 54798
Alignment:
Q  256 atgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||| |||||||||  | |||||||||||||||| |||||||||| ||||||||||||| | | |||  |||||| || ||||||||| ||| |||||    
T  54701 atgagaaattgcaataattgaacatgattatgatgaagactaaccaccttaccttagataatggttaatccaaacttaagcttcaattaagctcctaa 54798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 54583 - 54630
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 175  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||||||||    
T  54583 aaacatgcaatttcacccacaatcatacaattatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 3854 - 3936
Alignment:
Q  94 cacaattttcataacttttcattttc-acatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 175  Q
    |||||||| |||||||| |||||||  |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||    
T  3854 cacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 17336 - 17262
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  || ||| |||||||||||||||| |||||    
T  17336 atgattatgataaagactaacccgcttaccttagatggagattaatcccaacttaggcttcaatttagctcctaa 17262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 47; Significance: 1e-17; HSPs: 5)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 55904 - 55978
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||  |||||||||||||||| |||||    
T  55904 atgattatgataaagactaacccccttaccttagataaagattaatcccaatttaggcttcaatttagctcctaa 55978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 108107 - 108033
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||   | ||| |||||||||||| ||| |||||    
T  108107 atgattatgataaagactaacccccttaccttagatgaagattaattccaacttaggcttcaattcagctcctaa 108033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 13379 - 13266
Alignment:
Q  198 gagcacgaattt-agcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatgattatgataaagact 296  Q
    |||||||||||| | ||||||||||| ||||||||   |||||||||||||| |||  ||||| ||| |||||| | |||||||||||||||| |  |||    
T  13379 gagcacgaattttaacaacaattatcaattcattccaatcaacccatttcatacaa--catgagaaaatgcaaaaattgaacatgattatgatgataact 13282  T
Q  297 aacccccttaccttag 312  Q
    ||||||||||||||||    
T  13281 aacccccttaccttag 13266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 104691 - 104623
Alignment:
Q  142 accaacaatcatacaattattatcaattca-tgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||  || ||||||| ||||||| | |||||||||||||||||||| |||| ||||| ||||||    
T  104691 accaacaacaattcaattatcatcaatttaatgcatacaaacatatcatcatagttagagcatgaattt 104623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 193429 - 193355
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  || ||| ||||||||| |||||| |||||    
T  193429 atgattatgataaagactaacccccttaccttaaatgaagattaatcccaacttaggcttcactttagctcctaa 193355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 339 - 412
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||| |||||||||||||||||||||||| | |||||  |||||| |||||||||||||||| |||||    
T  339 tgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaa 412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 25532 - 25605
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||| |||||||||||||||||||||||| | |||||  |||||| |||||||||||||||| |||||    
T  25532 tgattatgatgaagactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 25605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 57424 - 57315
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaactttcccaat-tggattcttcaag 377  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| ||||||  |||| ||  |||||| | ||||| |||||    
T  57424 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctactaagctcacccaatcttgattcctcaag 57325  T
Q  378 ttcttctctc 387  Q
     |||||||||    
T  57324 ctcttctctc 57315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 70361 - 70307
Alignment:
Q  156 aattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  70361 aattatcatcaatttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 386
Target Start/End: Complemental strand, 1548 - 1417
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||| ||| |||||| | ||||||||||||||||||  |||||||||||||||||||| ||||||||  |||||||   ||||||||| ||| |||||     
T  1548 catgagaaaatgcaaaaattgaacatgattatgataataactaacccccttaccttagaagaagattaacccaaacccttgcttcaattcagctcctaag 1449  T
Q  355 ctttcccaattggattcttcaagttcttctct 386  Q
    ||| ||| | | ||||| ||||| | ||||||    
T  1448 cttaccccaattgattcctcaagctattctct 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 6475 - 6401
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||||||||||||||||||||||||| | || ||  || ||| |||||||||||||||| |||||    
T  6475 atgattatgataaagactaacccccttaccttagataaggaataatcccaacttaggcttcaatttagctcctaa 6401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 34340 - 34266
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| ||||||||| |||||| |||||    
T  34340 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaa 34266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 95297 - 95373
Alignment:
Q  278 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    |||||||||||  |||||||||||||||||||||| | | |||||  |||||||||||||||| |||||| ||||||    
T  95297 catgattatgaagaagactaacccccttaccttaggtaatgattaatccaaacctaggcttcactttagctcctaaa 95373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 18026 - 18092
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 345  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| ||||||||| ||||    
T  18026 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcacttta 18092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 12450 - 12376
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||||| ||||||||||||||||||||| ||||||   || ||| ||| |||||||||||| |||||    
T  12450 atgattatgataaaaactaacccccttaccttagataaagattcatcccaacttagacttcaatttagctcctaa 12376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 353
Target Start/End: Complemental strand, 49856 - 49710
Alignment:
Q  207 tttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaa--catgattatgataaagactaaccccct 304  Q
    |||| ||||||||||| ||||||||   |||||||||||||| |||  || | ||||||||||| ||   |  |||||||||||  ||||||||||||||    
T  49856 tttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgaagaagactaaccccct 49759  T
Q  305 taccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||| | | |||||  |||||| ||||||||| |||||| |||||    
T  49758 taccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 49710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 8176 - 8257
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| || || ||||||||  || ||||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  8176 aacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 1487 - 1420
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||| ||| |||||| | || |||||||||||||||  |||||||||||||||||||| ||||||||    
T  1487 catgagaaaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagatta 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 5548 - 5623
Alignment:
Q  278 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    |||||||||||| |||||||||||||||||||||| | | |||||  |||||| | ||||||| |||||| |||||    
T  5548 catgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaa 5623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 5508 - 5434
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaa 353  Q
    ||||||||||| |||||||||||||||||||||| | | |||||  |||| | ||||||||| |||||| |||||    
T  5508 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaa 5434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 2698 - 2743
Alignment:
Q  277 acatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||    
T  2698 acatgattatgataataactaacccccttaccttagaagaagatta 2743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 80187 - 80219
Alignment:
Q  279 atgattatgataaagactaacccccttacctta 311  Q
    |||||||||||||||||||||||||||||||||    
T  80187 atgattatgataaagactaacccccttacctta 80219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 1427 - 1348
Alignment:
Q  131 catgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||| ||||| ||||||||  || ||||||| | |||||  ||||||||||||||||||||| |||| ||||||||||||    
T  1427 catgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaattt 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 9682 - 9603
Alignment:
Q  131 catgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||| ||||| ||||||||  || ||||||| | |||||  ||||||||||||||||||||| |||| ||||||||||||    
T  9682 catgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaattt 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 17278 - 17207
Alignment:
Q  243 tttcatccaaatcatgaaaaattgcaaagaatgaac-atgattatgataaagactaacccccttaccttaga 313  Q
    |||||| |||| || ||||||||||||| ||  ||  ||||||||||| |||||||||||||||||||||||    
T  17278 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaga 17207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 4378 - 4303
Alignment:
Q  279 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcccctaaa 354  Q
    ||||||||||||||| |||||||||||||||||| | | |||||  |||||| |  |||||| |||||| ||||||    
T  4378 atgattatgataaagtctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctcctaaa 4303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 29445 - 29500
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  29445 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 29500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 7409 - 7362
Alignment:
Q  275 gaacatgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    |||||||||||||||||  ||||||||||||||||| || ||||||||    
T  7409 gaacatgattatgataataactaacccccttacctttgaagaagatta 7362  T

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Target: scaffold0107 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 31592 - 31647
Alignment:
Q  255 catgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttacctt 310  Q
    ||||| ||| |||||||| || |||||||||||||||  |||||||||||||||||    
T  31592 catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 31647  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 10854 - 10908
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    ||||||| ||||||| |||||||||||||||||||||| || | |||||||||||    
T  10854 caattatcatcaatttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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Target: scaffold0183 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 6905 - 6947
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatgaagatta 322  Q
    ||||||||||||  |||||||||||||||||||| ||||||||    
T  6905 tgattatgataataactaacccccttaccttagaagaagatta 6947  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 22476 - 22422
Alignment:
Q  156 aattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||||| |||||||||||||||||||||| | || ||||||||||||    
T  22476 aattatcatcaatttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 2691 - 2772
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  2691 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatatcatcataattagagcacgaattt 2772  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 22510 - 22429
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| || || ||||||||  || ||||||| ||||||| ||||||||||||||||| |||  |||| ||||||||||||    
T  22510 aacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatattatcctagttagagcacgaattt 22429  T

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Target: scaffold0516 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 12075 - 12039
Alignment:
Q  280 tgattatgataaagactaacccccttaccttagatga 316  Q
    ||||||||||||  |||||||||||||||||||||||    
T  12075 tgattatgataataactaacccccttaccttagatga 12039  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 2397 - 2317
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  2397 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 2317  T

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