View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13287_low_15 (Length: 286)
Name: NF13287_low_15
Description: NF13287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13287_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 40190588 - 40190315
Alignment:
| Q |
1 |
tgaggtagttaaaatagaaatggttagagttactagtacgttattatagtgatgaaactttagtagcttttatggctgataagtggtaagtgacattaat |
100 |
Q |
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| T |
40190588 |
tgaggtagttaaaatagaaatggttagagttactagtacgttattatagtgatgaaactttagtagcttttatggctgataagtggtaagtgacattaat |
40190489 |
T |
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| Q |
101 |
ttttcaggaacatgtgatagagataggagctcattaaatttataagttgatgtatgcttacaaatattatccctaattagatgtattattatgttatatg |
200 |
Q |
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| T |
40190488 |
ttttcaggaacatgtgatagagataggagctcattaaatttataagttgatgtatgcttacaaatattatccctaattagatgtattattatgttatatg |
40190389 |
T |
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| Q |
201 |
gaatttgtgatgacc-atgttacattcaattgcagactgcaattcccattctaataggaaccaagtttgatgat |
273 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40190388 |
gaatttgtgatgaccaatgttacattcaattgcagactgcaattcccattctaataggaaccaagtttgatgat |
40190315 |
T |
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