View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13287_low_18 (Length: 261)
Name: NF13287_low_18
Description: NF13287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13287_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 2 - 256
Target Start/End: Complemental strand, 7118671 - 7118402
Alignment:
| Q |
2 |
atattggcccctctataagtgaaactaaacatacacatttttaatatataattaaatgattactcttatgtgtatgcttaaatgttttttatttgtgatt |
101 |
Q |
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| T |
7118671 |
atattggcccctctataagtgaaactaaacatacacatttttaatatataattaaatgattactcttatgtgtatgcttaaatgtttttaatttgtgatt |
7118572 |
T |
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| Q |
102 |
gtaaccacgttgatataaatataagtaattatcaacttacatgtgttgaaataggtttaaa---------------agatacaaaacatcatttcactaa |
186 |
Q |
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| T |
7118571 |
gtaaccacgttgatataaatataagtatttatcaacttacatgtgttgaaataggtttaaaagatcaaagatctcaagatacaaaacatcatttcactaa |
7118472 |
T |
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| Q |
187 |
ctctgacaaaatcattcggtaacactaacaaaaatatatacttactaaatcaaaggttctaggctctgtg |
256 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
7118471 |
ctctgacaaaatcattcagtaacactaacaaaaatatatacttactaaatcaaaggttctaggctgtgtg |
7118402 |
T |
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