View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1328_low_2 (Length: 556)

Name: NF1328_low_2
Description: NF1328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1328_low_2
NF1328_low_2
[»] chr3 (9 HSPs)
chr3 (22-556)||(45167930-45168466)
chr3 (54-137)||(2472720-2472800)
chr3 (12-78)||(5128814-5128879)
chr3 (87-137)||(5128916-5128966)
chr3 (87-137)||(43303992-43304042)
chr3 (22-88)||(39913337-39913403)
chr3 (33-75)||(40593564-40593605)
chr3 (87-137)||(43306704-43306754)
chr3 (22-62)||(19795168-19795208)
[»] scaffold0110 (2 HSPs)
scaffold0110 (12-137)||(46765-46888)
scaffold0110 (23-82)||(45376-45435)
[»] chr8 (25 HSPs)
chr8 (40-163)||(18468611-18468732)
chr8 (12-78)||(22921969-22922034)
chr8 (12-78)||(42891783-42891848)
chr8 (19-78)||(18180802-18180860)
chr8 (18-82)||(6845247-6845311)
chr8 (54-135)||(20693776-20693855)
chr8 (12-56)||(42890303-42890347)
chr8 (28-78)||(22520918-22520967)
chr8 (22-78)||(22512165-22512220)
chr8 (87-137)||(2189753-2189803)
chr8 (54-137)||(2687719-2687800)
chr8 (87-137)||(22926680-22926730)
chr8 (87-137)||(23570591-23570641)
chr8 (54-137)||(24731204-24731285)
chr8 (87-137)||(42890399-42890449)
chr8 (87-137)||(42891696-42891746)
chr8 (56-118)||(2609546-2609605)
chr8 (18-82)||(37189778-37189841)
chr8 (87-137)||(22512078-22512128)
chr8 (87-137)||(22519378-22519428)
chr8 (87-137)||(22921882-22921932)
chr8 (28-74)||(22926771-22926816)
chr8 (87-159)||(16598256-16598329)
chr8 (54-116)||(14130142-14130201)
chr8 (19-78)||(26150601-26150660)
[»] chr2 (23 HSPs)
chr2 (12-78)||(33655532-33655598)
chr2 (54-137)||(23457623-23457704)
chr2 (12-78)||(27952437-27952502)
chr2 (12-78)||(27956273-27956338)
chr2 (19-61)||(22264347-22264389)
chr2 (20-82)||(31636250-31636312)
chr2 (54-137)||(21772352-21772432)
chr2 (87-137)||(27952350-27952400)
chr2 (20-82)||(31634017-31634079)
chr2 (54-137)||(33051595-33051676)
chr2 (87-137)||(33655635-33655685)
chr2 (87-137)||(36647300-36647350)
chr2 (87-163)||(31634111-31634188)
chr2 (22-82)||(8781429-8781488)
chr2 (45-135)||(12966445-12966532)
chr2 (87-143)||(28737913-28737969)
chr2 (54-135)||(32162002-32162081)
chr2 (60-137)||(15129373-15129447)
chr2 (87-137)||(2155974-2156024)
chr2 (87-137)||(22011443-22011493)
chr2 (87-137)||(31636344-31636394)
chr2 (28-114)||(4184881-4184963)
chr2 (87-142)||(23456582-23456638)
[»] chr7 (28 HSPs)
chr7 (54-137)||(24840120-24840201)
chr7 (54-129)||(3778748-3778820)
chr7 (12-61)||(4303355-4303404)
chr7 (18-78)||(13882805-13882864)
chr7 (12-61)||(4300462-4300511)
chr7 (54-135)||(1369782-1369861)
chr7 (54-135)||(27142643-27142722)
chr7 (56-133)||(4888721-4888795)
chr7 (18-61)||(13886323-13886366)
chr7 (56-143)||(11228960-11229045)
chr7 (87-143)||(1220466-1220522)
chr7 (57-137)||(11000857-11000935)
chr7 (87-137)||(27309646-27309697)
chr7 (87-137)||(859188-859238)
chr7 (87-137)||(1217192-1217242)
chr7 (87-136)||(1883496-1883546)
chr7 (87-137)||(13882718-13882768)
chr7 (87-137)||(13886191-13886241)
chr7 (87-138)||(1753628-1753680)
chr7 (87-162)||(1874545-1874621)
chr7 (18-61)||(5678346-5678390)
chr7 (18-61)||(5703398-5703442)
chr7 (28-137)||(1365624-1365729)
chr7 (87-137)||(5934611-5934662)
chr7 (87-137)||(30217822-30217871)
chr7 (57-143)||(1786663-1786747)
chr7 (87-143)||(4133299-4133356)
chr7 (54-135)||(8916410-8916489)
[»] chr1 (17 HSPs)
chr1 (45-136)||(31915518-31915606)
chr1 (12-78)||(50857563-50857628)
chr1 (54-143)||(10927171-10927256)
chr1 (13-82)||(8931127-8931195)
chr1 (87-137)||(8931227-8931277)
chr1 (54-137)||(12944093-12944174)
chr1 (60-143)||(28660771-28660852)
chr1 (54-133)||(23987549-23987630)
chr1 (59-137)||(31913359-31913434)
chr1 (54-138)||(8221465-8221547)
chr1 (58-137)||(26981490-26981568)
chr1 (29-75)||(12486347-12486392)
chr1 (54-137)||(50713690-50713771)
chr1 (87-136)||(13444021-13444070)
chr1 (28-61)||(42071456-42071489)
chr1 (87-137)||(43681468-43681520)
chr1 (91-135)||(9194976-9195020)
[»] chr6 (17 HSPs)
chr6 (18-78)||(11190410-11190469)
chr6 (12-83)||(30049821-30049892)
chr6 (12-83)||(30052108-30052179)
chr6 (12-82)||(3535941-3536009)
chr6 (12-82)||(3542152-3542220)
chr6 (84-143)||(18727112-18727171)
chr6 (87-137)||(29340838-29340888)
chr6 (87-137)||(3536041-3536091)
chr6 (19-61)||(26571062-26571104)
chr6 (87-137)||(30052210-30052260)
chr6 (87-163)||(30049923-30050000)
chr6 (56-134)||(33615538-33615614)
chr6 (28-133)||(12882075-12882177)
chr6 (54-137)||(1127231-1127312)
chr6 (87-137)||(3542252-3542302)
chr6 (45-117)||(27822170-27822239)
chr6 (87-136)||(11658939-11658988)
[»] chr5 (7 HSPs)
chr5 (12-74)||(40778909-40778970)
chr5 (19-117)||(19497356-19497450)
chr5 (18-61)||(21849106-21849149)
chr5 (87-134)||(21849000-21849047)
chr5 (87-137)||(40778818-40778868)
chr5 (87-135)||(18252423-18252472)
chr5 (54-143)||(26140320-26140407)
[»] chr4 (10 HSPs)
chr4 (18-75)||(13085214-13085270)
chr4 (28-137)||(40206101-40206206)
chr4 (20-78)||(6659449-6659506)
chr4 (19-61)||(13086270-13086312)
chr4 (54-135)||(38888023-38888102)
chr4 (54-134)||(10494880-10494958)
chr4 (87-137)||(6659362-6659412)
chr4 (54-118)||(9260550-9260611)
chr4 (54-137)||(18689552-18689633)
chr4 (54-135)||(7634057-7634136)
[»] scaffold0240 (2 HSPs)
scaffold0240 (54-135)||(1635-1713)
scaffold0240 (56-137)||(14826-14904)
[»] scaffold0330 (1 HSPs)
scaffold0330 (87-135)||(17647-17695)
[»] scaffold0054 (1 HSPs)
scaffold0054 (87-137)||(37718-37768)
[»] scaffold0251 (1 HSPs)
scaffold0251 (54-135)||(9679-9759)
[»] scaffold0024 (1 HSPs)
scaffold0024 (54-137)||(145711-145792)


Alignment Details
Target: chr3 (Bit Score: 420; Significance: 0; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 22 - 556
Target Start/End: Complemental strand, 45168466 - 45167930
Alignment:
Q  22 tttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatt 121  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  45168466 ttttttattcaataaaattattcgagattttctctcaatttcttgtggattctggaaccctatatttttcacaagtttgtcgcttgcaaacttgtttatt 45168367  T
Q  122 tcaatctaggtttagcatttgcgaacacttgcttcc----gtactgtgacaatatccatattcaatactaaaatgtttagataaacattgttgttgatta 217  Q
    ||||||||||||||||| |||| ||| |||||||||    ||||  |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  45168366 tcaatctaggtttagcacttgctaacccttgcttccttccgtacaatgacaagatccatattcaatactaaaatgtttaaataaacattgttgttaatta 45168267  T
Q  218 tgaacatcaaccttttgaaaaatagcataaacaaaaattgattactttaaaataggatcgctaaaagaaaggtccttttgaattatacaacaacacctac 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  45168266 tgaacatcaaccttttgaaaaatagcataaacaaaaattgattactttaaaataggatcactaaaagaaaggtctttttgaattatacaacaacacctac 45168167  T
Q  318 aatatgagacaaacaacatttatcaaattgtaacaatgcccgaagaactcgcactccaactcataacatgcttggaaggtgatattagatataggtatgt 417  Q
    ||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45168166 aatctgaggc-aacaacatttatcaaattgtaacagtgcccgaagaactcgcactccaactcataacatgcttggaaggtgatattagatataggtatgt 45168068  T
Q  418 gatctatgcatatatatcaccactcatcatcacgtgtgaatatgcatcatgtcaatttgttctttcatgagtttgtttatagtggaatac-ttacacacc 516  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45168067 gatctatgc--atatatcaccactcatcatcacgtgtgaatatgcatcatgtcaatttgttctttcatgagtttgtttatagtggaatactttacacacc 45167970  T
Q  517 ctaaatgagaatttccaaaccaattaacatgataatatat 556  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  45167969 ctaaatgagaatttccaaaacaattaacatgataatatat 45167930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 2472800 - 2472720
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  2472800 tctcaatttctggtggattccggaaccctat---tttcacaagtttgtcggttgcaaacttgtctctttcaatttaggtttagc 2472720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 5128814 - 5128879
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  5128814 agaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 5128879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 5128916 - 5128966
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  5128916 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 5128966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 43304042 - 43303992
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  43304042 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 43303992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 39913403 - 39913337
Alignment:
Q  22 tttttgattcaataaaattattcgaga-ttttctctcaatttctggtgaattccggaaccctatattt 88  Q
    ||||||||||||||||| ||||||||| ||||||| ||| |||||||| |||||||| |||| |||||    
T  39913403 tttttgattcaataaaaatattcgagacttttctcccaa-ttctggtggattccggacccctctattt 39913337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 40593605 - 40593564
Alignment:
Q  33 ataaaattattcgagattttctctcaatttctggtgaattccg 75  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  40593605 ataaaattattcgagattttctctcaattt-tggtggattccg 40593564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 43306754 - 43306704
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||| | |||||||||||||  |||| |||||||||||||    
T  43306754 ttttcacaagtttgttgcttgcaaacttgttcttttctatctaggtttagc 43306704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 19795168 - 19795208
Alignment:
Q  22 tttttgattcaataaaattattcgagattttctctcaattt 62  Q
    ||||| ||||||||||||||||| ||||||||||| |||||    
T  19795168 ttttttattcaataaaattattccagattttctctaaattt 19795208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 46888 - 46765
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaa 111  Q
    ||||||||||||||| ||||| ||| | ||||||||||||||||||||||| ||||| ||||||||||| ||   |||| | | |||||||| |||||||    
T  46888 agagacacacttttttattcattaataatattcgagattttctctcaatttttggtggattccggaaccttaa--ttttgataggtttgtcgcttgcaaa 46791  T
Q  112 cttgtttatttcaatctaggtttagc 137  Q
    ||||||  |||| |||||||||||||    
T  46790 cttgttcttttctatctaggtttagc 46765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 45435 - 45376
Alignment:
Q  23 ttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    |||| ||||| ||| | ||||||||||||||||||||||||||||| |||| ||||||||    
T  45435 tttttattcattaataatattcgagattttctctcaatttctggtggattctggaaccct 45376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 18468611 - 18468732
Alignment:
Q  40 tattcgaga-ttttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagca 138  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||   |||||||||||||||| |||||| ||||||  |||| | |||||||||||     
T  18468611 tattcgagacttttctctcaatttctggtggattccggaaccctat---tttcacaagtttgtcgcttgcaagcttgttcttttctacctaggtttagcg 18468707  T
Q  139 tttgcgaacacttgcttccgtactg 163  Q
     |||| ||| |||||||| ||||||    
T  18468708 cttgctaacccttgcttctgtactg 18468732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 22922034 - 22921969
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  22922034 agagacacaccttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 22921969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 42891848 - 42891783
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  42891848 agaggcacactttttgattcaataaaattatttgagattttctctcaa-ttctggtggattccggaa 42891783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 18180860 - 18180802
Alignment:
Q  19 cactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||    
T  18180860 cactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattctggaa 18180802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 6845247 - 6845311
Alignment:
Q  18 acactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| ||||| |||||| ||||||    
T  6845247 acactttttgattcattaataatattcgagattttctctcaatttttggtggattccgaaaccct 6845311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 20693776 - 20693855
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttta-tttcaatctaggttta 135  Q
    |||||||||||| || ||||||||||| |||   |||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  20693776 tctcaatttctgatggattccggaaccatat---tttcacaaatttgtcgcttgcaaacttgtttattttcaatctaggttta 20693855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 42890303 - 42890347
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctct 56  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  42890303 agaggcacactttttgattcaataaaattattcgagattttctct 42890347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 22520967 - 22520918
Alignment:
Q  28 attcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  22520967 attcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 22520918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 22512220 - 22512165
Alignment:
Q  22 tttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  22512220 ttttttattcaataaaattattcgagattttctctcaa-ttctggtggatttcggaa 22512165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 2189803 - 2189753
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||||||| |||||||||    
T  2189803 ttttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagc 2189753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 2687719 - 2687800
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggtttagc 137  Q
    ||||||||||| ||| ||||  |||||||||   |||||||||||||||| ||||||||||||| | |||| |||||||||||||    
T  2687719 tctcaatttcttgtggattctagaaccctat---tttcacaagtttgtcgcttgcaaacttgttctttttctatctaggtttagc 2687800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22926730 - 22926680
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  22926730 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 22926680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 23570591 - 23570641
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  23570591 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 23570641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 24731204 - 24731285
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggtttagc 137  Q
    |||||||||||| ||||||||| ||| ||||   |||||||||||||| | |||||||||||||   ||||||||||||||||||    
T  24731204 tctcaatttctgatgaattccgaaactctat---tttcacaagtttgttgcttgcaaacttgttccttttcaatctaggtttagc 24731285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 42890399 - 42890449
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  42890399 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 42890449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 42891746 - 42891696
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  42891746 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 42891696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 2609605 - 2609546
Alignment:
Q  56 tcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt 118  Q
    |||||||||||||||||| | ||||||||   |||||||||||||||  ||||||||||||||    
T  2609605 tcaatttctggtgaattctgtaaccctat---tttcacaagtttgtcacttgcaaacttgttt 2609546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 37189778 - 37189841
Alignment:
Q  18 acactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    ||||||||| ||||| ||| | ||||||||||||| ||||||||||||||| ||| |||||||||    
T  37189778 acacttttttattcattaataatattcgagatttt-tctcaatttctggtggatttcggaaccct 37189841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22512128 - 22512078
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| | |||||||||||    
T  22512128 ttttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagc 22512078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22519428 - 22519378
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| | |||||||||||    
T  22519428 ttttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagc 22519378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22921932 - 22921882
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||| ||  |||| |||||||||||||    
T  22921932 ttttcacaagtttgtcgcttgcaaacttattcttttctatctaggtttagc 22921882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 22926816 - 22926771
Alignment:
Q  28 attcaataaaattattcgagattttctctcaatttctggtgaattcc 74  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||    
T  22926816 attcaataaaaatattcgagattttctctcaa-ttctggtggattcc 22926771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 16598256 - 16598329
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttc-aatctaggtttagcatttgcgaacacttgcttccgt 159  Q
    |||||||||||||||||  ||||||||||||| |||| |||||| |||||||  |||| |||  ||||||||||    
T  16598256 ttttcacaagtttgtcgcgtgcaaacttgtttctttctaatctaagtttagcgcttgctaaccattgcttccgt 16598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 14130142 - 14130201
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgt 116  Q
    ||||||||||||||| ||||||||||| ||   ||||||||| ||| ||| ||||||||||||    
T  14130142 tctcaatttctggtggattccggaacctta---ttttcacaaatttatcgcttgcaaacttgt 14130201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 26150601 - 26150660
Alignment:
Q  19 cactttttgattcaataaaattattcgaga-ttttctctcaatttctggtgaattccggaa 78  Q
    |||||||| ||||||||||| ||||||||| ||||||||||| |||||||| |||| ||||    
T  26150601 cactttttcattcaataaaaatattcgagacttttctctcaa-ttctggtggattctggaa 26150660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 33655532 - 33655598
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33655532 agaggcacactttttcattcaataaaattattcgagattttctctcaatttctggtggattccggaa 33655598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 23457623 - 23457704
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttta-tttcaatctaggtttagc 137  Q
    ||||||||| ||||| |||||||||||||||   |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  23457623 tctcaatttttggtggattccggaaccctat---tttcacaagtttgtcgcttgcaaacttgtttattttcaatctaggtttagc 23457704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 27952502 - 27952437
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  27952502 agaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 27952437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 27956338 - 27956273
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  27956338 agaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 27956273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 22264347 - 22264389
Alignment:
Q  19 cactttttgattcaataaaattattcgagattttctctcaatt 61  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  22264347 cactttttgattcaataaaattattcgagattttatctcaatt 22264389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 31636250 - 31636312
Alignment:
Q  20 actttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    ||||||| ||||| ||| | ||||| ||||||||||||||||||||||| |||||||||||||    
T  31636250 acttttttattcattaataatattcaagattttctctcaatttctggtggattccggaaccct 31636312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 21772352 - 21772432
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||| || || |||| ||||||||||   ||||| |||||||||| |||||||||||||| |||||||||| |||||||    
T  21772352 tctcaatttgtgatggattcaggaaccctat---tttcataagtttgtcgcttgcaaacttgtttttttcaatctaagtttagc 21772432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 27952400 - 27952350
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  27952400 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 27952350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 31634017 - 31634079
Alignment:
Q  20 actttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    ||||||| ||||| ||| | |||| |||||||||||||||||||||||| |||||| ||||||    
T  31634017 acttttttattcattaataatatttgagattttctctcaatttctggtggattccgaaaccct 31634079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 33051595 - 33051676
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggtttagc 137  Q
    ||||||||||| ||| ||||| |||||||||   ||||| |||||||||| ||||||||||||| | ||||||| ||||||||||    
T  33051595 tctcaatttctagtggattccagaaccctat---tttcaaaagtttgtcgcttgcaaacttgttctttttcaatttaggtttagc 33051676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 33655635 - 33655685
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||| | |||| |||||||||||||    
T  33655635 ttttcacaagtttgtcgcttgcaaacttgtatttttctatctaggtttagc 33655685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 36647300 - 36647350
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||||||| |||||||||    
T  36647300 ttttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagc 36647350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 31634111 - 31634188
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagcatttgcgaacact-tgcttccgtactg 163  Q
    ||||||||||||||||| | |||||||||||  |||| ||||||||||||| ||||| ||| ||  ||||||||||||    
T  31634111 ttttcacaagtttgtcgctagcaaacttgttcttttctatctaggtttagcgtttgctaaccctacgcttccgtactg 31634188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 8781429 - 8781488
Alignment:
Q  22 tttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||| ||| || ||||||    
T  8781429 tttttcattcaataaaattattcgagatttactctcaa-ttctggtggatttcgaaaccct 8781488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 12966445 - 12966532
Alignment:
Q  45 gagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggttta 135  Q
    |||| ||| ||||||||| ||||| ||| |||||||||||   ||||||||||| |||| |||| ||||||||  ||||||||||| ||||    
T  12966445 gagagtttttctcaatttttggtggatttcggaaccctat---tttcacaagttcgtcgcttgcgaacttgttcttttcaatctagattta 12966532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 28737913 - 28737969
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagcatttgc 143  Q
    |||||| |||||||||| ||||||||||| |  ||||||||||||||||||| ||||    
T  28737913 ttttcaaaagtttgtcgcttgcaaacttgctcttttcaatctaggtttagcacttgc 28737969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 32162081 - 32162002
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggttta 135  Q
    ||||| ||||||||| ||||| |||||||||   |||||||||||||||  ||||||||||||||  |||| |||||||||||    
T  32162081 tctcagtttctggtggattcctgaaccctat---tttcacaagtttgtcacttgcaaacttgtttcttttcgatctaggttta 32162002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 15129373 - 15129447
Alignment:
Q  60 tttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||  |||| ||||||||||   |||||||||||||||| |||| ||||||||  |||| |||||||||||||    
T  15129373 tttctggttgattctggaaccctat---tttcacaagtttgtcgcttgcgaacttgttcttttctatctaggtttagc 15129447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 2155974 - 2156024
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| | |||||||||||  |||| |||||||||||||    
T  2155974 ttttcacaagtttgtcgctcgcaaacttgttcttttctatctaggtttagc 2156024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 22011443 - 22011493
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||  |||||||||||||  |||| |||||||||||||    
T  22011443 ttttcacaagtttgtcacttgcaaacttgttcttttctatctaggtttagc 22011493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 31636344 - 31636394
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| ||||||||| |||  |||| |||||||||||||    
T  31636344 ttttcacaagtttgtcgcttgcaaactagttcttttctatctaggtttagc 31636394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 4184881 - 4184963
Alignment:
Q  28 attcaataaaattattcgagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaactt 114  Q
    ||||||||| ||| || |||| ||| ||||||||||| ||| |||||| |||||||   ||||||||||||||||| |||| |||||    
T  4184881 attcaataatatt-ttagagagtttttctcaatttctcgtggattccgaaacccta---ttttcacaagtttgtcgcttgcgaactt 4184963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 23456582 - 23456638
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagcatttg 142  Q
    |||||| |||||||||| ||||||||||||||  ||||||| |||||||| ||||||    
T  23456582 ttttcaaaagtttgtcgcttgcaaacttgtttcttttcaatataggtttaacatttg 23456638  T

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Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 24840120 - 24840201
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagc 137  Q
    ||||||||||||||| |||||||||||||||   |||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  24840120 tctcaatttctggtggattccggaaccctat---tttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggtttagc 24840201  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 3778820 - 3778748
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatcta 129  Q
    ||||||||||||||| |||||||||||||||   |||||||||||| ||| ||||||||||||| |||||||||||    
T  3778820 tctcaatttctggtggattccggaaccctat---tttcacaagtttctcgcttgcaaacttgttcatttcaatcta 3778748  T

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Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 4303355 - 4303404
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatt 61  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4303355 agaggcacactttttgattcaataaaattattcgagattttctctcaatt 4303404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 13882864 - 13882805
Alignment:
Q  18 acactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  13882864 acactttttgattcaataaaattatttgagattttctctcaa-ttctggtggattccggaa 13882805  T

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Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 4300462 - 4300511
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatt 61  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  4300462 agagacacactttttgattcaatcaaattatttgagattttctctcaatt 4300511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 1369782 - 1369861
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggttta 135  Q
    ||||||||||||||| ||||||||||||||   |||| |||||||| ||| ||||||||||||||  ||||||||||||||||    
T  1369782 tctcaatttctggtggattccggaacccta---ttttaacaagtttatcgcttgcaaacttgtttcttttcaatctaggttta 1369861  T

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Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 27142643 - 27142722
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggttta 135  Q
    |||||||||||||||  ||| ||||||||||   |||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  27142643 tctcaatttctggtggtttcaggaaccctat---tttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggttta 27142722  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 4888795 - 4888721
Alignment:
Q  56 tcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtt 133  Q
    |||||||||||||||||||||||| ||||   ||||||| |||||||| |||||||||||||  |||| |||||||||    
T  4888795 tcaatttctggtgaattccggaactctat---tttcacaggtttgtcgcttgcaaacttgttcttttctatctaggtt 4888721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 13886366 - 13886323
Alignment:
Q  18 acactttttgattcaataaaattattcgagattttctctcaatt 61  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  13886366 acactttttgattcaataaaatcattcgagattttctctcaatt 13886323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 11228960 - 11229045
Alignment:
Q  56 tcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggtttagcatttgc 143  Q
    ||||||||||||| |||| ||||||||   ||||||||| ||||||||  |||||||||||| | ||||||||||||||||||| ||||    
T  11228960 tcaatttctggtggattctggaaccct---tttttcacacgtttgtcgcctgcaaacttgttctttttcaatctaggtttagcacttgc 11229045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 1220522 - 1220466
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagcatttgc 143  Q
    ||||||||||||||||| ||||||||||||| ||||| || |||||||||| |||||    
T  1220522 ttttcacaagtttgtcgtttgcaaacttgttcatttctatgtaggtttagcgtttgc 1220466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 11000935 - 11000857
Alignment:
Q  57 caatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagc 137  Q
    |||||||||||| ||||| ||||||||   ||||||| ||||||||| |||| |||||||||  ||||||||||||||||||    
T  11000935 caatttctggtggattcctgaacccta---ttttcactagtttgtcgcttgcgaacttgtttcttttcaatctaggtttagc 11000857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 27309697 - 27309646
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagc 137  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  27309697 ttttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggtttagc 27309646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 859238 - 859188
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  859238 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 1217242 - 1217192
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  1217242 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 1217192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 1883496 - 1883546
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttag 136  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  1883496 ttttcacaagtttgtcgtttgcaaacttgtttcttttcaatctaggtttag 1883546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 13882768 - 13882718
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  13882768 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 13882718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 13886241 - 13886191
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  13886241 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 13886191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 1753680 - 1753628
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagca 138  Q
    ||||||||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  1753680 ttttcacaagtttgtcgcttgcaaacttgtttcttttcaatttaggtttagca 1753628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 1874545 - 1874621
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagcatttgcgaacacttgcttccgtact 162  Q
    ||||||||||||||||| ||||||||||||||  |||||||| ||||||||  ||||| ||||   |||||||||||    
T  1874545 ttttcacaagtttgtcgtttgcaaacttgtttcttttcaatcaaggtttagtgtttgctaacatacgcttccgtact 1874621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 5678390 - 5678346
Alignment:
Q  18 acactttttgattcaataaaattattcgaga-ttttctctcaatt 61  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||    
T  5678390 acactttttcattcaataaaattattcgagacttttctctcaatt 5678346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 5703442 - 5703398
Alignment:
Q  18 acactttttgattcaataaaattattcgaga-ttttctctcaatt 61  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||    
T  5703442 acactttttcattcaataaaattattcgagacttttctctcaatt 5703398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 1365624 - 1365729
Alignment:
Q  28 attcaataaaattattcgagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatc 127  Q
    ||||||||| ||| || |||| ||| ||||||||| ||||| |||  ||||||||||   |||||||||||  ||| || ||||||||||  ||||||||    
T  1365624 attcaataatatt-ttagagagtttttctcaatttttggtggattatggaaccctat---tttcacaagttcatcgcttacaaacttgttcctttcaatc 1365719  T
Q  128 taggtttagc 137  Q
    ||||||||||    
T  1365720 taggtttagc 1365729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 5934611 - 5934662
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagc 137  Q
    ||||||||||||||||| ||||||| ||||||  ||||||||||||||||||    
T  5934611 ttttcacaagtttgtcgcttgcaaatttgtttcttttcaatctaggtttagc 5934662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 30217822 - 30217871
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||| |||||| || ||||||||||||||||||    
T  30217822 ttttcacaagtttgtcgcttgcgaacttg-ttctttcaatctaggtttagc 30217871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 1786663 - 1786747
Alignment:
Q  57 caatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggtttagcatttgc 143  Q
    ||||||||| || |||| ||||||||||   |||| || |||||||| ||||||||||||| | |||| |||||||||||||| ||||    
T  1786663 caatttctgatggattctggaaccctat---tttcgcatgtttgtcgcttgcaaacttgttatttttctatctaggtttagcacttgc 1786747  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 4133356 - 4133299
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttat-ttcaatctaggtttagcatttgc 143  Q
    ||||||||||||||||| ||| ||| ||||| || ||||||||| |||||||||||||    
T  4133356 ttttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcatttgc 4133299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 8916489 - 8916410
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttta-tttcaatctaggttta 135  Q
    ||||||||||||||| ||||| |||| ||||   || ||||||||| ||| ||||||||||||| | ||| ||||||||||||    
T  8916489 tctcaatttctggtggattccagaactctat---ttccacaagtttatcgtttgcaaacttgttcattttaaatctaggttta 8916410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 31915518 - 31915606
Alignment:
Q  45 gagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttag 136  Q
    |||| ||| ||||||||||||||| |||||||||||||||   |||||||||||||||| |||||||||||||| |||||| ||| ||||||    
T  31915518 gagagtttttctcaatttctggtggattccggaaccctat---tttcacaagtttgtcgcttgcaaacttgtttctttcaacctaagtttag 31915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 50857628 - 50857563
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  50857628 agaggcacactttttgatacaataaaattattcgagattttctctcaa-ttctggtggattccggaa 50857563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 10927171 - 10927256
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggtttagcatttgc 143  Q
    ||||||||||||||| |||||||||||||     |||||||||||||||| ||||||||||||| | ||||| |||||||||||| |||||    
T  10927171 tctcaatttctggtggattccggaaccct-----tttcacaagtttgtcgcttgcaaacttgttctttttcagtctaggtttagcgtttgc 10927256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 8931127 - 8931195
Alignment:
Q  13 gagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    |||||||||||||| || || ||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  8931127 gagacacacttttttat-cattaataatattcgagattttctctcaatttctggtggattccggaaccct 8931195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 8931227 - 8931277
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  8931227 ttttcacaagtttatcgcttgcaaacttgtttttttcaatctaggtttagc 8931277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 12944093 - 12944174
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagc 137  Q
    ||||||||||||||| ||||| ||||||||| |||   |||||||||||| ||||||||||||||  ||||||||||| ||||||    
T  12944093 tctcaatttctggtggattccagaaccctattttt---acaagtttgtcgtttgcaaacttgtttcttttcaatctagatttagc 12944174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 28660852 - 28660771
Alignment:
Q  60 tttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatt-tcaatctaggtttagcatttgc 143  Q
    ||||||||| ||| |||||||||||   |||||||||||||||| |||||||||||||| || || ||||||||||||| |||||    
T  28660852 tttctggtggatttcggaaccctat---tttcacaagtttgtcgcttgcaaacttgtttcttatctatctaggtttagcgtttgc 28660771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 23987549 - 23987630
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatat-ttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggtt 133  Q
    ||||||||||||||| ||||||||||| | ||| ||||||||||||||||| ||||||| ||||| | |||| |||||||||    
T  23987549 tctcaatttctggtggattccggaaccttctatattttcacaagtttgtcgtttgcaaagttgttctttttctatctaggtt 23987630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 31913359 - 31913434
Alignment:
Q  59 atttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    |||||||||| ||| ||||| ||||| |||   |||||||||||| |||||||||||||| |||||| |||||||||||    
T  31913359 atttctggtggatttcggaaacctattttt---acaagtttgtcgcttgcaaacttgtttctttcaacctaggtttagc 31913434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 8221465 - 8221547
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttat-ttcaatctaggtttagca 138  Q
    ||||||||||||||| ||||| ||||||||   |||||| |||||||||| |||||||||||| | | |||||||| |||||||||    
T  8221465 tctcaatttctggtggattccagaacccta---ttttcataagtttgtcgtttgcaaacttgtctctattcaatcttggtttagca 8221547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 26981490 - 26981568
Alignment:
Q  58 aatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    |||||||| || ||| || |||| ||||||||| |||||||| ||| |||||||||||||| ||||||||||| ||||||    
T  26981490 aatttctgatggatttcgaaaccatatattttt-acaagtttttcgcttgcaaacttgtttctttcaatctagatttagc 26981568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 12486392 - 12486347
Alignment:
Q  29 ttcaataaaattattcgagattttctctcaatttctggtgaattccg 75  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  12486392 ttcaataaaattattcgagattttctctcaattt-tggtggattccg 12486347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 50713690 - 50713771
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgt-ttatttcaatctaggtttagc 137  Q
    ||||||||||||||| |||||| |||||||   |||||||||||||||||  ||| ||||||| |  ||||||||||||||||||    
T  50713690 tctcaatttctggtggattccgaaacccta---ttttcacaagtttgtcgcctgcgaacttgtctcttttcaatctaggtttagc 50713771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 13444070 - 13444021
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttag 136  Q
    ||||||||||||||||| |||||||||||||  |||| ||||||||||||    
T  13444070 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttag 13444021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 42071489 - 42071456
Alignment:
Q  28 attcaataaaattattcgagattttctctcaatt 61  Q
    ||||||||||||||||||||||| ||||||||||    
T  42071489 attcaataaaattattcgagattctctctcaatt 42071456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 43681468 - 43681520
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttg--tttatttcaatctaggtttagc 137  Q
    ||||||||| ||||||| |||||||||||  ||| ||||||||||||||||||    
T  43681468 ttttcacaaatttgtcgcttgcaaacttgtttttttttcaatctaggtttagc 43681520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 9195020 - 9194976
Alignment:
Q  91 cacaagtttgtcggttgcaaacttgtttatttcaatctaggttta 135  Q
    |||| |||||||| ||||||||||||||  |||||||||||||||    
T  9195020 cacatgtttgtcgcttgcaaacttgtttcattcaatctaggttta 9194976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 9e-19; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11190410 - 11190469
Alignment:
Q  18 acactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  11190410 acactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 11190469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 30049821 - 30049892
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaacccta 83  Q
    ||||||||||||||| ||||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  30049821 agagacacacttttttattcattaataatattcgagattttctctcaatttttggtggattccggaacccta 30049892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 30052108 - 30052179
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaacccta 83  Q
    ||||||||||||||| ||||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  30052108 agagacacacttttttattcattaataatattcgagattttctctcaatttttggtggattccggaacccta 30052179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 3535941 - 3536009
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    |||| |||||||||  ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  3535941 agaggcacactttt--attcattaataatattcgagattttctctcaatttctggtggattccggaaccct 3536009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 3542152 - 3542220
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccct 82  Q
    |||| |||||||||  ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  3542152 agaggcacactttt--attcattaataatattcgagattttctctcaatttctggtggattccggaaccct 3542220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 18727112 - 18727171
Alignment:
Q  84 tatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagcatttgc 143  Q
    |||||||||||||||||||| |||| ||||||| | |||||||||||||||||| |||||    
T  18727112 tatttttcacaagtttgtcgcttgcgaacttgtgtttttcaatctaggtttagcgtttgc 18727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 29340888 - 29340838
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  29340888 ttttcacaagtttgtcgcttgcaaacttgtttttttctatctaggtttagc 29340838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 3536041 - 3536091
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  3536041 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 3536091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 26571062 - 26571104
Alignment:
Q  19 cactttttgattcaataaaattattcgagattttctctcaatt 61  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  26571062 cacttattcattcaataaaattattcgagattttctctcaatt 26571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 30052210 - 30052260
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  30052210 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 30052260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 30049923 - 30050000
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagcatttgcgaacactt-gcttccgtactg 163  Q
    ||||||||||||||||| |||||||||||||  |||| || ||||||||||  |||| ||| ||| ||||||||||||    
T  30049923 ttttcacaagtttgtcgcttgcaaacttgttcttttctatataggtttagcgcttgctaacccttcgcttccgtactg 30050000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 33615614 - 33615538
Alignment:
Q  56 tcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggttt 134  Q
    ||||||| |||||||||| | ||||||||   |||||||||||||||| ||||||||||||| | |||| ||||||||||    
T  33615614 tcaatttatggtgaattctgaaaccctat---tttcacaagtttgtcgcttgcaaacttgttctttttctatctaggttt 33615538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 12882075 - 12882177
Alignment:
Q  28 attcaataaaattattcgagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatt-tcaat 126  Q
    ||||||||| ||| || |||| ||| ||||||||||||||| |||||| |||||||   ||||||||||||||||| ||  |||||||| | || |||||    
T  12882075 attcaataatatt-ttagagagtttttctcaatttctggtggattccgaaacccta---ttttcacaagtttgtcgctttaaaacttgtctcttctcaat 12882170  T
Q  127 ctaggtt 133  Q
    |||||||    
T  12882171 ctaggtt 12882177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 1127231 - 1127312
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagc 137  Q
    ||||||||| ||||| |||||| ||| ||||   |||||||| ||||||| ||||||||||||||  ||| ||||||||||||||    
T  1127231 tctcaatttttggtgtattccgaaacactat---tttcacaaatttgtcgcttgcaaacttgtttctttttaatctaggtttagc 1127312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 3542252 - 3542302
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| || ||||||||||  |||| |||||||||||||    
T  3542252 ttttcacaagtttgtcgcttacaaacttgttcttttctatctaggtttagc 3542302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 27822239 - 27822170
Alignment:
Q  45 gagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt 117  Q
    |||| ||| ||||||||||||||| ||| ||||||||| |   |||||||||||||||| ||| |||||||||    
T  27822239 gagagtttttctcaatttctggtggatttcggaaccctgt---tttcacaagtttgtcgcttgaaaacttgtt 27822170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 11658939 - 11658988
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttag 136  Q
    ||||||||||||| ||| ||||||| |||||  |||||||||||||||||    
T  11658939 ttttcacaagtttatcgcttgcaaatttgttcttttcaatctaggtttag 11658988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 40778970 - 40778909
Alignment:
Q  12 agagacacactttttgattcaataaaattattcgagattttctctcaatttctggtgaattcc 74  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  40778970 agaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattcc 40778909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 19497450 - 19497356
Alignment:
Q  19 cactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt 117  Q
    |||||||||||||||||| ||| || |||||||| ||||||||| || || ||| |||||||||||   |||||||||||||||| |||||||||||||    
T  19497450 cactttttgattcaataatatt-ttagagattttttctcaatttttgatggatttcggaaccctat---tttcacaagtttgtcgcttgcaaacttgtt 19497356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 21849149 - 21849106
Alignment:
Q  18 acactttttgattcaataaaattattcgagattttctctcaatt 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21849149 acactttttgattcaataaaattattcgagattttctctcaatt 21849106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 21849047 - 21849000
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggttt 134  Q
    ||||||||||||||||| |||||||||||||  |||| ||||||||||    
T  21849047 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggttt 21849000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 40778868 - 40778818
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    |||| |||||||||||| |||||||||||||  |||| |||||||||||||    
T  40778868 tttttacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagc 40778818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 18252423 - 18252472
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggttta 135  Q
    |||||||| |||||||| ||||||||||||| |||||| |||||||||||    
T  18252423 ttttcacaggtttgtcgcttgcaaacttgttctatttctatctaggttta 18252472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 26140320 - 26140407
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttta-tttcaatctaggtttagcatttgc 143  Q
    ||||||||| ||||| ||||  |||||||||   ||||| |||||||||| |||||| |||||||  ||||||||||| |||||| |||||    
T  26140320 tctcaatttttggtggattcttgaaccctat---tttcataagtttgtcgcttgcaatcttgttttctttcaatctagatttagcgtttgc 26140407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 13085270 - 13085214
Alignment:
Q  18 acactttttgattcaataaaattattcgagattttctctcaatttctggtgaattccg 75  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  13085270 acacttttttattcaataaaattattcgagattttctctcaattt-tggtggattccg 13085214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 40206101 - 40206206
Alignment:
Q  28 attcaataaaattattcgagattttctctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatc 127  Q
    ||||||||| ||| || |||| ||| |||||||||||||||||||||| ||| ||||   |||||||||||||||| |||| ||||||| | |||||||     
T  40206101 attcaataatatt-ttagagaatttttctcaatttctggtgaattccgaaacactat---tttcacaagtttgtcgcttgcgaacttgtctctttcaatt 40206196  T
Q  128 taggtttagc 137  Q
    ||| ||||||    
T  40206197 tagatttagc 40206206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 6659506 - 6659449
Alignment:
Q  20 actttttgattcaataaaattattcgagattttctctcaatttctggtgaattccggaa 78  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||    
T  6659506 actttttgattcactaaaactattcgagattttctctcaa-ttctggtggattccggaa 6659449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 13086312 - 13086270
Alignment:
Q  19 cactttttgattcaataaaattattcgagattttctctcaatt 61  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  13086312 cactttttaattcaataaaattattcgagattttctctcaatt 13086270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 38888102 - 38888023
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttta-tttcaatctaggttta 135  Q
    |||||||||||  || |||||| ||||||||   |||||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  38888102 tctcaatttctaatggattccgaaaccctat---tttcacaagtttgtcgcttgcaaatttgtttattttcaatctaggttta 38888023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 10494880 - 10494958
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggttt 134  Q
    |||||||||||||||||||||||||| |||   |||||||| |||||||  ||||||||||||||  |||| ||||||||||    
T  10494880 tctcaatttctggtgaattccggaactcta---ttttcacaggtttgtcacttgcaaacttgtttcttttccatctaggttt 10494958  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 6659412 - 6659362
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||||||||||||| |||||||||||||  |||| |||||| ||||||    
T  6659412 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctagatttagc 6659362  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 9260550 - 9260611
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt 118  Q
    ||||||||||||||| |||| | ||||||||   |||| ||||||||||| ||||||||||||||    
T  9260550 tctcaatttctggtggattctgaaaccctat---tttcgcaagtttgtcgtttgcaaacttgttt 9260611  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 18689633 - 18689552
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgttt-atttcaatctaggtttagc 137  Q
    ||||||||||||||| |||| | |||||||   |||| ||||||||||||  ||||||||| |||  ||||||||||||||||||    
T  18689633 tctcaatttctggtggattctgcaacccta---tttttacaagtttgtcgcatgcaaacttttttcttttcaatctaggtttagc 18689552  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 7634057 - 7634136
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtt-tatttcaatctaggttta 135  Q
    ||||||||||||||| ||||| |||| |||   ||| ||||||||| ||| |||||||||||||   ||||||||||||||||    
T  7634057 tctcaatttctggtggattccagaactcta---tttccacaagtttatcgtttgcaaacttgttccttttcaatctaggttta 7634136  T

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Target: scaffold0240 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 1635 - 1713
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggttta 135  Q
    |||||| |||||||| ||||| ||||| |||   ||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  1635 tctcaaattctggtggattccagaaccatat---tttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggttta 1713  T

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Target: scaffold0240; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 14826 - 14904
Alignment:
Q  56 tcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    ||||||| ||||| ||||||||  |||||   |||||||||||| ||| |||| ||||| |||||||||||| |||||||||    
T  14826 tcaatttttggtggattccggattcctat---tttcacaagtttttcgcttgccaacttatttatttcaatcaaggtttagc 14904  T

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Target: scaffold0330 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 17647 - 17695
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggttta 135  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  17647 ttttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggttta 17695  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 37718 - 37768
Alignment:
Q  87 ttttcacaagtttgtcggttgcaaacttgtttatttcaatctaggtttagc 137  Q
    |||||| |||||||||| |||||||||||||  ||||||||||||||||||    
T  37718 ttttcataagtttgtcgcttgcaaacttgttcttttcaatctaggtttagc 37768  T

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Target: scaffold0251 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 9679 - 9759
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaa--gtttgtcggttgcaaacttgtttatttcaatctaggttta 135  Q
    ||||||||||||||| ||| ||||||||||   |||||||||  ||| |||| ||| |||||||||  ||||||||||||||||    
T  9679 tctcaatttctggtggatttcggaacccta---ttttcacaagtgttagtcgcttggaaacttgttcttttcaatctaggttta 9759  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 145711 - 145792
Alignment:
Q  54 tctcaatttctggtgaattccggaaccctatatttttcacaagtttgtcggttgcaaacttg-tttatttcaatctaggtttagc 137  Q
    ||||||||| ||||| ||||  ||||||||| |||   ||||| |||||| ||||||||||| ||| ||||||||||||||||||    
T  145711 tctcaatttttggtggattctagaaccctattttt---acaagcttgtcgcttgcaaacttgatttttttcaatctaggtttagc 145792  T

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