View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1328_low_21 (Length: 256)

Name: NF1328_low_21
Description: NF1328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1328_low_21
NF1328_low_21
[»] chr4 (77 HSPs)
chr4 (1-174)||(22249729-22249902)
chr4 (1-174)||(53559602-53559775)
chr4 (1-168)||(20086439-20086606)
chr4 (1-170)||(54961646-54961815)
chr4 (1-168)||(13872071-13872238)
chr4 (1-167)||(12691621-12691786)
chr4 (1-168)||(33294359-33294525)
chr4 (1-168)||(8287147-8287315)
chr4 (50-168)||(47981900-47982018)
chr4 (52-168)||(13872335-13872451)
chr4 (1-168)||(47862367-47862533)
chr4 (1-163)||(19916663-19916825)
chr4 (52-168)||(12691408-12691524)
chr4 (52-168)||(22249999-22250115)
chr4 (52-166)||(34238474-34238588)
chr4 (52-174)||(54961427-54961549)
chr4 (1-168)||(37677850-37678017)
chr4 (52-169)||(47980686-47980803)
chr4 (6-156)||(50245871-50246021)
chr4 (52-168)||(33294146-33294262)
chr4 (52-168)||(47862154-47862270)
chr4 (68-168)||(19916938-19917038)
chr4 (68-168)||(37678130-37678230)
chr4 (52-133)||(26601342-26601423)
chr4 (50-167)||(48507681-48507798)
chr4 (68-156)||(50246140-50246228)
chr4 (52-116)||(53559441-53559505)
chr4 (1-168)||(27813263-27813434)
chr4 (54-168)||(53475833-53475947)
chr4 (68-168)||(8286934-8287034)
chr4 (68-156)||(35730943-35731031)
chr4 (68-168)||(32846364-32846464)
chr4 (58-152)||(52339213-52339307)
chr4 (103-168)||(37678043-37678108)
chr4 (97-168)||(19740862-19740933)
chr4 (52-167)||(54590146-54590261)
chr4 (50-170)||(34238734-34238847)
chr4 (103-168)||(8287056-8287121)
chr4 (103-168)||(12691530-12691595)
chr4 (103-168)||(33294268-33294333)
chr4 (103-156)||(35730868-35730921)
chr4 (100-173)||(37732294-37732367)
chr4 (103-168)||(47862276-47862341)
chr4 (1-118)||(489235-489352)
chr4 (1-118)||(515027-515144)
chr4 (52-116)||(20086703-20086767)
chr4 (68-156)||(20600961-20601049)
chr4 (68-156)||(45199141-45199229)
chr4 (54-165)||(9254411-9254522)
chr4 (103-170)||(48507538-48507605)
chr4 (54-168)||(53477064-53477178)
chr4 (51-168)||(13336819-13336936)
chr4 (103-168)||(20086632-20086697)
chr4 (103-168)||(22249928-22249993)
chr4 (103-168)||(34238594-34238659)
chr4 (103-168)||(47980809-47980874)
chr4 (103-156)||(53559511-53559564)
chr4 (68-144)||(489466-489542)
chr4 (68-144)||(515258-515334)
chr4 (51-87)||(35730731-35730767)
chr4 (104-168)||(37732397-37732461)
chr4 (68-174)||(27813045-27813151)
chr4 (68-174)||(56556578-56556684)
chr4 (54-168)||(54591560-54591676)
chr4 (103-167)||(13872265-13872329)
chr4 (112-168)||(27813181-27813237)
chr4 (51-106)||(20601211-20601266)
chr4 (1-40)||(32846575-32846614)
chr4 (119-173)||(35730659-35730713)
chr4 (103-168)||(489378-489443)
chr4 (103-168)||(515170-515235)
chr4 (68-173)||(52815660-52815765)
chr4 (68-173)||(52816421-52816526)
chr4 (52-89)||(53753400-53753437)
chr4 (104-168)||(20601072-20601136)
chr4 (68-168)||(38813556-38813656)
chr4 (68-168)||(56557323-56557423)
[»] chr8 (89 HSPs)
chr8 (1-168)||(43866926-43867093)
chr8 (1-174)||(41182111-41182284)
chr8 (1-168)||(36623354-36623522)
chr8 (1-167)||(27856957-27857123)
chr8 (1-170)||(41801816-41801985)
chr8 (1-168)||(37342784-37342951)
chr8 (1-168)||(23424727-23424894)
chr8 (1-168)||(40525722-40525889)
chr8 (52-173)||(11478142-11478263)
chr8 (52-173)||(25287789-25287910)
chr8 (1-156)||(20096235-20096394)
chr8 (1-149)||(11478360-11478508)
chr8 (52-173)||(36623619-36623740)
chr8 (52-168)||(7659-7775)
chr8 (52-168)||(43866713-43866829)
chr8 (5-168)||(40422162-40422326)
chr8 (1-168)||(29190162-29190329)
chr8 (4-168)||(26739934-26740100)
chr8 (52-171)||(37343048-37343167)
chr8 (50-156)||(547444-547550)
chr8 (1-167)||(35163500-35163671)
chr8 (1-167)||(7396-7562)
chr8 (52-173)||(40525504-40525625)
chr8 (50-167)||(41251390-41251507)
chr8 (52-167)||(20096023-20096138)
chr8 (52-167)||(29190425-29190540)
chr8 (52-156)||(547701-547805)
chr8 (1-170)||(31690110-31690279)
chr8 (52-168)||(23424514-23424630)
chr8 (52-168)||(41251125-41251241)
chr8 (1-168)||(25288007-25288174)
chr8 (68-168)||(40422442-40422542)
chr8 (14-174)||(9632531-9632691)
chr8 (1-156)||(22763810-22763966)
chr8 (54-156)||(38600218-38600320)
chr8 (52-133)||(26739754-26739835)
chr8 (62-156)||(38619812-38619906)
chr8 (52-125)||(27856787-27856860)
chr8 (68-168)||(31689897-31689997)
chr8 (54-168)||(27437503-27437617)
chr8 (51-168)||(22763597-22763714)
chr8 (52-168)||(27436565-27436681)
chr8 (68-168)||(38598966-38599066)
chr8 (52-130)||(41802082-41802160)
chr8 (68-168)||(9632330-9632430)
chr8 (68-168)||(23514023-23514123)
chr8 (76-168)||(24529946-24530038)
chr8 (68-167)||(37713699-37713798)
chr8 (103-168)||(22763719-22763784)
chr8 (68-174)||(15716158-15716264)
chr8 (1-144)||(23514236-23514379)
chr8 (106-168)||(41182023-41182085)
chr8 (103-168)||(547630-547695)
chr8 (103-168)||(25287916-25287981)
chr8 (103-168)||(31690019-31690084)
chr8 (105-168)||(41251249-41251312)
chr8 (103-173)||(37713820-37713890)
chr8 (103-169)||(41802010-41802076)
chr8 (51-168)||(4463407-4463524)
chr8 (52-133)||(4970162-4970243)
chr8 (103-168)||(11478269-11478334)
chr8 (103-168)||(23424636-23424701)
chr8 (103-156)||(23514145-23514198)
chr8 (103-168)||(29190354-29190419)
chr8 (103-168)||(37342977-37343042)
chr8 (103-152)||(40422371-40422420)
chr8 (103-168)||(40525631-40525696)
chr8 (103-168)||(43866835-43866900)
chr8 (55-174)||(36574813-36574932)
chr8 (68-167)||(13566413-13566512)
chr8 (1-40)||(24529891-24529930)
chr8 (54-156)||(7393129-7393231)
chr8 (103-165)||(36623551-36623613)
chr8 (103-156)||(9632452-9632505)
chr8 (103-168)||(20096144-20096209)
chr8 (103-151)||(15716088-15716136)
chr8 (68-116)||(24529732-24529780)
chr8 (68-168)||(34665772-34665872)
chr8 (103-170)||(13566534-13566601)
chr8 (54-165)||(29574747-29574858)
chr8 (55-90)||(36575996-36576031)
chr8 (68-174)||(33497614-33497720)
chr8 (182-212)||(39106282-39106312)
chr8 (103-156)||(7600-7653)
chr8 (52-165)||(29575867-29575980)
chr8 (103-168)||(35163697-35163762)
chr8 (51-131)||(41767652-41767732)
chr8 (51-131)||(41773595-41773675)
chr8 (140-168)||(43073565-43073593)
[»] chr1 (98 HSPs)
chr1 (1-167)||(49002879-49003044)
chr1 (1-168)||(26953103-26953270)
chr1 (1-168)||(29042970-29043137)
chr1 (1-168)||(33347418-33347585)
chr1 (4-168)||(25414846-25415010)
chr1 (1-168)||(739433-739600)
chr1 (1-168)||(2953466-2953633)
chr1 (1-168)||(5183508-5183675)
chr1 (1-164)||(37152544-37152707)
chr1 (1-168)||(12577012-12577181)
chr1 (4-168)||(6056594-6056761)
chr1 (1-173)||(24701267-24701439)
chr1 (1-168)||(1047419-1047586)
chr1 (52-173)||(739216-739337)
chr1 (1-174)||(5926515-5926689)
chr1 (52-168)||(2953730-2953846)
chr1 (52-168)||(12577278-12577394)
chr1 (1-167)||(29980642-29980807)
chr1 (1-167)||(46849661-46849827)
chr1 (52-168)||(1040300-1040416)
chr1 (52-168)||(1047206-1047322)
chr1 (52-156)||(33347682-33347786)
chr1 (52-168)||(37152804-37152920)
chr1 (52-168)||(5183772-5183888)
chr1 (52-168)||(19755671-19755787)
chr1 (52-168)||(46849924-46850040)
chr1 (52-168)||(49003141-49003257)
chr1 (51-168)||(49990061-49990178)
chr1 (52-156)||(46364841-46364945)
chr1 (59-168)||(46364576-46364685)
chr1 (52-168)||(5926787-5926903)
chr1 (52-168)||(6056378-6056494)
chr1 (51-156)||(33030600-33030705)
chr1 (1-173)||(10019370-10019542)
chr1 (52-168)||(29980904-29981020)
chr1 (1-168)||(8890214-8890378)
chr1 (1-168)||(48380896-48381065)
chr1 (52-168)||(25415110-25415226)
chr1 (52-168)||(26953367-26953483)
chr1 (4-168)||(6334658-6334822)
chr1 (4-168)||(52454758-52454921)
chr1 (52-126)||(49989839-49989913)
chr1 (68-168)||(33030336-33030436)
chr1 (52-167)||(29042759-29042873)
chr1 (1-167)||(35311977-35312145)
chr1 (68-174)||(8890491-8890597)
chr1 (52-165)||(52563656-52563769)
chr1 (1-133)||(30830167-30830300)
chr1 (68-168)||(48380683-48380783)
chr1 (62-133)||(37152470-37152541)
chr1 (68-173)||(24701551-24701656)
chr1 (1-133)||(34175959-34176092)
chr1 (68-151)||(46545013-46545096)
chr1 (52-173)||(28533774-28533895)
chr1 (68-174)||(35312258-35312364)
chr1 (1-78)||(46544823-46544900)
chr1 (68-152)||(52455037-52455121)
chr1 (103-168)||(6056500-6056565)
chr1 (103-168)||(46364770-46364835)
chr1 (101-165)||(36381453-36381517)
chr1 (68-142)||(10019655-10019729)
chr1 (106-168)||(33347611-33347673)
chr1 (103-168)||(2953659-2953724)
chr1 (103-168)||(5183701-5183766)
chr1 (103-168)||(10019568-10019633)
chr1 (103-156)||(12577219-12577272)
chr1 (103-168)||(19755600-19755665)
chr1 (103-156)||(24701477-24701530)
chr1 (103-168)||(30830326-30830391)
chr1 (110-167)||(34176119-34176176)
chr1 (103-168)||(37152733-37152798)
chr1 (103-156)||(46544938-46544991)
chr1 (103-168)||(49003070-49003135)
chr1 (104-168)||(8890404-8890468)
chr1 (103-167)||(26953297-26953361)
chr1 (104-168)||(29980833-29980897)
chr1 (101-165)||(32238704-32238768)
chr1 (68-172)||(34176206-34176310)
chr1 (103-167)||(35312172-35312236)
chr1 (103-170)||(33030458-33030525)
chr1 (52-111)||(51933828-51933887)
chr1 (52-152)||(30830397-30830494)
chr1 (103-173)||(46544757-46544827)
chr1 (103-156)||(1040422-1040475)
chr1 (103-156)||(1047328-1047381)
chr1 (52-173)||(2828190-2828311)
chr1 (52-133)||(6345619-6345700)
chr1 (103-168)||(25415039-25415104)
chr1 (103-168)||(29042879-29042944)
chr1 (103-168)||(46849853-46849918)
chr1 (103-168)||(52454950-52455015)
chr1 (54-134)||(2829523-2829603)
chr1 (122-174)||(36380180-36380232)
chr1 (68-168)||(46282073-46282173)
chr1 (52-151)||(52564933-52565032)
chr1 (103-168)||(739343-739407)
chr1 (52-133)||(6344292-6344373)
chr1 (68-165)||(46282791-46282888)
[»] chr2 (73 HSPs)
chr2 (1-173)||(32519370-32519542)
chr2 (1-174)||(16366959-16367132)
chr2 (1-174)||(1150152-1150325)
chr2 (52-168)||(22731798-22731914)
chr2 (52-174)||(20911126-20911248)
chr2 (52-161)||(16367229-16367338)
chr2 (52-168)||(1149939-1150055)
chr2 (1-174)||(22309427-22309600)
chr2 (1-168)||(20911345-20911511)
chr2 (52-168)||(45663774-45663890)
chr2 (1-144)||(9693768-9693911)
chr2 (70-168)||(10446834-10446932)
chr2 (1-167)||(19606920-19607087)
chr2 (1-174)||(17580543-17580713)
chr2 (3-156)||(18476921-18477074)
chr2 (52-168)||(32519157-32519273)
chr2 (52-167)||(8089455-8089570)
chr2 (1-156)||(41846406-41846561)
chr2 (171-249)||(4664522-4664600)
chr2 (1-167)||(8089667-8089831)
chr2 (7-128)||(17366843-17366964)
chr2 (52-168)||(17580330-17580446)
chr2 (50-168)||(4375815-4375933)
chr2 (1-168)||(28599642-28599809)
chr2 (1-165)||(37984942-37985106)
chr2 (1-173)||(43681853-43682026)
chr2 (5-156)||(9958839-9958990)
chr2 (68-167)||(9959107-9959206)
chr2 (1-156)||(17284950-17285105)
chr2 (68-168)||(22309713-22309813)
chr2 (68-168)||(9694024-9694124)
chr2 (68-144)||(41846674-41846750)
chr2 (68-167)||(28599430-28599529)
chr2 (70-168)||(17366628-17366726)
chr2 (54-156)||(19620777-19620879)
chr2 (103-168)||(45663703-45663768)
chr2 (55-151)||(43236523-43236619)
chr2 (103-168)||(17366750-17366815)
chr2 (70-167)||(18477160-18477257)
chr2 (103-168)||(41846587-41846652)
chr2 (103-168)||(43682052-43682117)
chr2 (103-167)||(4375673-4375737)
chr2 (54-133)||(24607951-24608030)
chr2 (55-165)||(43237705-43237815)
chr2 (103-168)||(8089576-8089641)
chr2 (103-168)||(32519279-32519344)
chr2 (100-168)||(17284745-17284813)
chr2 (71-147)||(23206409-23206485)
chr2 (71-147)||(23678013-23678089)
chr2 (50-125)||(5608637-5608712)
chr2 (103-170)||(9693935-9694002)
chr2 (103-168)||(1150061-1150126)
chr2 (103-168)||(16367158-16367223)
chr2 (103-168)||(22731727-22731792)
chr2 (68-156)||(5608876-5608964)
chr2 (103-151)||(20911254-20911302)
chr2 (104-168)||(28599552-28599616)
chr2 (68-168)||(29958545-29958645)
chr2 (50-133)||(11830224-11830307)
chr2 (52-131)||(13646119-13646198)
chr2 (52-131)||(13652075-13652154)
chr2 (68-174)||(20982520-20982626)
chr2 (103-156)||(9959032-9959085)
chr2 (103-152)||(22309642-22309691)
chr2 (68-173)||(29957814-29957919)
chr2 (55-151)||(7981066-7981162)
chr2 (103-167)||(17580452-17580516)
chr2 (68-168)||(20101772-20101872)
chr2 (52-90)||(19607131-19607169)
chr2 (103-168)||(5608789-5608854)
chr2 (103-156)||(17284859-17284912)
chr2 (52-165)||(33881580-33881693)
chr2 (68-168)||(20983259-20983359)
[»] chr3 (71 HSPs)
chr3 (1-168)||(1741389-1741556)
chr3 (1-173)||(51279228-51279400)
chr3 (1-168)||(10998088-10998255)
chr3 (1-167)||(55036884-55037050)
chr3 (1-174)||(40257089-40257261)
chr3 (1-171)||(53037242-53037412)
chr3 (1-174)||(11312731-11312904)
chr3 (52-172)||(40256872-40256992)
chr3 (7-168)||(33458137-33458300)
chr3 (52-168)||(10749320-10749436)
chr3 (52-168)||(22129008-22129124)
chr3 (8-168)||(30804069-30804230)
chr3 (52-167)||(21300399-21300514)
chr3 (52-167)||(55036672-55036787)
chr3 (53-164)||(10749663-10749774)
chr3 (51-168)||(46670250-46670367)
chr3 (1-167)||(30890422-30890588)
chr3 (1-111)||(21300192-21300302)
chr3 (1-167)||(28310352-28310517)
chr3 (1-133)||(22129221-22129356)
chr3 (52-168)||(53037029-53037145)
chr3 (52-168)||(10997879-10997992)
chr3 (1-168)||(30654486-30654653)
chr3 (1-168)||(38642633-38642799)
chr3 (52-133)||(11313001-11313081)
chr3 (51-180)||(33989284-33989413)
chr3 (53-116)||(10749586-10749649)
chr3 (51-168)||(24576560-24576675)
chr3 (51-156)||(35432615-35432720)
chr3 (68-171)||(30803845-30803948)
chr3 (68-174)||(30654762-30654867)
chr3 (68-168)||(33989017-33989116)
chr3 (68-167)||(24576291-24576392)
chr3 (103-168)||(24576414-24576479)
chr3 (103-168)||(30803970-30804035)
chr3 (103-168)||(33989138-33989202)
chr3 (103-168)||(35432475-35432540)
chr3 (103-156)||(38642867-38642920)
chr3 (103-168)||(55036793-55036858)
chr3 (68-168)||(21255813-21255913)
chr3 (95-168)||(49651-49724)
chr3 (103-168)||(11312930-11312995)
chr3 (103-168)||(21300328-21300393)
chr3 (103-168)||(22129130-22129195)
chr3 (103-168)||(53037151-53037216)
chr3 (68-168)||(28310630-28310730)
chr3 (103-170)||(30890331-30890398)
chr3 (68-167)||(33457919-33458018)
chr3 (118-173)||(35432403-35432458)
chr3 (103-149)||(51279444-51279490)
chr3 (103-156)||(10749442-10749495)
chr3 (103-156)||(10997998-10998051)
chr3 (68-165)||(43105832-43105929)
chr3 (68-165)||(48188383-48188480)
chr3 (52-93)||(51279496-51279537)
chr3 (68-168)||(1757302-1757402)
chr3 (103-167)||(33458040-33458104)
chr3 (68-173)||(38642942-38643043)
chr3 (103-167)||(40256998-40257062)
chr3 (68-168)||(45279282-45279382)
chr3 (58-133)||(20309512-20309587)
chr3 (118-157)||(38642835-38642874)
chr3 (70-149)||(46670539-46670618)
chr3 (70-168)||(32717105-32717203)
chr3 (68-165)||(45278549-45278646)
chr3 (68-168)||(1756552-1756652)
chr3 (68-168)||(2944664-2944764)
chr3 (68-168)||(11026630-11026730)
chr3 (68-168)||(22736688-22736788)
chr3 (104-168)||(30654678-30654742)
chr3 (68-168)||(43105235-43105335)
[»] scaffold0321 (3 HSPs)
scaffold0321 (1-168)||(10877-11044)
scaffold0321 (55-174)||(10658-10777)
scaffold0321 (103-166)||(10786-10849)
[»] chr7 (66 HSPs)
chr7 (1-168)||(37563356-37563523)
chr7 (1-174)||(26825626-26825799)
chr7 (1-168)||(34454486-34454649)
chr7 (52-168)||(43938160-43938276)
chr7 (1-168)||(43937896-43938063)
chr7 (4-167)||(5636243-5636406)
chr7 (54-168)||(37563622-37563736)
chr7 (52-163)||(12931004-12931115)
chr7 (13-168)||(12930774-12930929)
chr7 (52-168)||(12928305-12928421)
chr7 (52-168)||(12929520-12929636)
chr7 (60-174)||(26825904-26826018)
chr7 (52-174)||(34454746-34454868)
chr7 (1-168)||(27558063-27558234)
chr7 (13-168)||(12929289-12929445)
chr7 (1-168)||(5280274-5280440)
chr7 (3-173)||(47081844-47082014)
chr7 (50-174)||(12928033-12928156)
chr7 (1-133)||(15827758-15827890)
chr7 (1-168)||(47121492-47121660)
chr7 (1-171)||(44545594-44545764)
chr7 (68-167)||(20947196-20947295)
chr7 (1-168)||(20947408-20947576)
chr7 (50-151)||(23191118-23191218)
chr7 (68-168)||(5280553-5280653)
chr7 (1-167)||(35262629-35262794)
chr7 (103-168)||(15827916-15827981)
chr7 (63-168)||(25049438-25049543)
chr7 (103-168)||(27557972-27558037)
chr7 (68-156)||(27557862-27557950)
chr7 (68-155)||(5636041-5636127)
chr7 (54-173)||(7159197-7159315)
chr7 (51-168)||(7158233-7158350)
chr7 (83-167)||(19980190-19980274)
chr7 (68-156)||(47082129-47082212)
chr7 (103-170)||(20947317-20947384)
chr7 (182-239)||(729790-729846)
chr7 (103-168)||(12929449-12929514)
chr7 (103-168)||(12930933-12930998)
chr7 (103-168)||(26825825-26825890)
chr7 (103-168)||(34454675-34454740)
chr7 (103-168)||(37563549-37563614)
chr7 (52-167)||(26830007-26830122)
chr7 (103-150)||(45586584-45586631)
chr7 (103-168)||(19980074-19980139)
chr7 (70-167)||(44545879-44545976)
chr7 (68-168)||(27480745-27480845)
chr7 (103-167)||(47082043-47082107)
chr7 (52-131)||(47738979-47739058)
chr7 (70-168)||(38643552-38643650)
chr7 (68-165)||(22661362-22661459)
chr7 (68-165)||(40022527-40022623)
chr7 (103-156)||(43938101-43938154)
chr7 (104-156)||(5636150-5636202)
chr7 (96-168)||(39525678-39525750)
chr7 (54-165)||(31695598-31695709)
chr7 (70-173)||(37284106-37284209)
chr7 (52-131)||(47733059-47733138)
chr7 (68-142)||(19979979-19980052)
chr7 (110-156)||(47121408-47121454)
chr7 (103-168)||(5280466-5280531)
chr7 (103-168)||(12928234-12928299)
chr7 (52-165)||(31694476-31694589)
chr7 (109-170)||(35262818-35262879)
chr7 (182-218)||(34561201-34561237)
chr7 (104-168)||(44545790-44545854)
[»] chr6 (66 HSPs)
chr6 (1-168)||(13480423-13480590)
chr6 (1-168)||(21880366-21880533)
chr6 (52-168)||(13480210-13480326)
chr6 (1-168)||(5064337-5064504)
chr6 (1-168)||(22494095-22494261)
chr6 (1-168)||(23291959-23292126)
chr6 (1-173)||(15819704-15819877)
chr6 (52-168)||(23291746-23291862)
chr6 (52-167)||(5064601-5064716)
chr6 (52-168)||(737963-738079)
chr6 (52-168)||(20560930-20561046)
chr6 (52-167)||(32337567-32337682)
chr6 (62-168)||(30234868-30234974)
chr6 (4-168)||(3299561-3299725)
chr6 (1-174)||(7612762-7612937)
chr6 (1-168)||(32337779-32337948)
chr6 (68-168)||(3299841-3299941)
chr6 (3-168)||(20774298-20774463)
chr6 (52-168)||(21880630-21880746)
chr6 (53-168)||(26503621-26503736)
chr6 (1-156)||(26542832-26542990)
chr6 (62-156)||(9607592-9607686)
chr6 (52-133)||(20561193-20561274)
chr6 (1-165)||(1066143-1066308)
chr6 (23-168)||(20994821-20994965)
chr6 (60-168)||(20994965-20995073)
chr6 (3-168)||(3586214-3586378)
chr6 (52-144)||(22493907-22493998)
chr6 (90-168)||(16704613-16704691)
chr6 (68-168)||(7612550-7612650)
chr6 (68-168)||(31386801-31386901)
chr6 (4-156)||(31879675-31879828)
chr6 (54-168)||(8427202-8427316)
chr6 (103-168)||(20561122-20561187)
chr6 (68-152)||(16706934-16707017)
chr6 (68-168)||(26542616-26542719)
chr6 (53-156)||(31393450-31393553)
chr6 (58-152)||(19039061-19039155)
chr6 (103-169)||(22494004-22494070)
chr6 (70-174)||(17784385-17784489)
chr6 (68-172)||(20774087-20774191)
chr6 (68-167)||(19296509-19296608)
chr6 (103-168)||(23291868-23291933)
chr6 (70-156)||(3586495-3586578)
chr6 (104-168)||(13480333-13480397)
chr6 (68-167)||(31879461-31879559)
chr6 (103-168)||(3586406-3586471)
chr6 (103-168)||(32337688-32337753)
chr6 (104-168)||(5064530-5064594)
chr6 (103-167)||(19296423-19296487)
chr6 (104-156)||(21544532-21544584)
chr6 (68-116)||(26503418-26503466)
chr6 (74-168)||(18865122-18865216)
chr6 (103-156)||(737904-737957)
chr6 (68-133)||(1066421-1066486)
chr6 (103-156)||(3299766-3299819)
chr6 (103-168)||(7612672-7612737)
chr6 (103-156)||(21880571-21880624)
chr6 (103-148)||(26503488-26503533)
chr6 (103-168)||(26542741-26542806)
chr6 (68-168)||(33399968-33400068)
chr6 (68-168)||(33401124-33401224)
chr6 (95-133)||(15819605-15819643)
chr6 (68-173)||(14656477-14656582)
chr6 (68-168)||(4116801-4116901)
chr6 (68-168)||(4117545-4117645)
[»] chr5 (72 HSPs)
chr5 (1-168)||(25253301-25253468)
chr5 (1-168)||(25317092-25317259)
chr5 (1-168)||(37945209-37945375)
chr5 (1-167)||(6421625-6421791)
chr5 (4-168)||(13064627-13064791)
chr5 (1-168)||(32052226-32052393)
chr5 (4-168)||(12991006-12991170)
chr5 (1-168)||(33735315-33735482)
chr5 (5-172)||(20704932-20705100)
chr5 (52-168)||(32052490-32052606)
chr5 (52-174)||(33735579-33735701)
chr5 (1-168)||(8323271-8323438)
chr5 (52-168)||(14745450-14745566)
chr5 (1-168)||(7015510-7015678)
chr5 (52-168)||(25253088-25253204)
chr5 (52-168)||(25316878-25316994)
chr5 (4-156)||(18013830-18013981)
chr5 (55-163)||(14745582-14745690)
chr5 (52-168)||(37944996-37945112)
chr5 (55-167)||(6421891-6422003)
chr5 (1-173)||(22533387-22533559)
chr5 (1-156)||(27753493-27753648)
chr5 (1-146)||(41339378-41339523)
chr5 (68-168)||(7015791-7015891)
chr5 (60-143)||(18013639-18013722)
chr5 (1-168)||(21261079-21261245)
chr5 (68-168)||(18934715-18934815)
chr5 (68-156)||(21260879-21260967)
chr5 (68-168)||(22024152-22024252)
chr5 (52-174)||(14744712-14744834)
chr5 (50-167)||(16117964-16118073)
chr5 (68-134)||(27753761-27753827)
chr5 (50-167)||(18934978-18935094)
chr5 (68-156)||(22533672-22533760)
chr5 (103-168)||(25253210-25253275)
chr5 (103-168)||(27753674-27753739)
chr5 (68-168)||(34404486-34404585)
chr5 (106-170)||(41339547-41339611)
chr5 (103-170)||(8323180-8323247)
chr5 (102-156)||(22024077-22024131)
chr5 (103-168)||(12990912-12990977)
chr5 (103-168)||(13064533-13064598)
chr5 (103-168)||(18013736-18013801)
chr5 (103-168)||(22533585-22533650)
chr5 (103-168)||(33735508-33735573)
chr5 (103-151)||(25317000-25317048)
chr5 (106-174)||(31118951-31119019)
chr5 (103-166)||(6421819-6421882)
chr5 (68-167)||(8323059-8323158)
chr5 (54-132)||(39402132-39402210)
chr5 (68-170)||(41339635-41339737)
chr5 (103-168)||(16118146-16118211)
chr5 (103-168)||(21260989-21261054)
chr5 (103-168)||(32052419-32052484)
chr5 (63-133)||(20704774-20704844)
chr5 (103-168)||(34404607-34404673)
chr5 (63-156)||(147383-147476)
chr5 (68-165)||(8673756-8673853)
chr5 (113-174)||(12628257-12628318)
chr5 (103-168)||(18934837-18934902)
chr5 (70-167)||(31108338-31108434)
chr5 (103-168)||(37945118-37945183)
chr5 (104-156)||(12628340-12628392)
chr5 (68-168)||(16118233-16118333)
chr5 (68-168)||(20072123-20072223)
chr5 (101-168)||(31107933-31108000)
chr5 (1-40)||(34404699-34404738)
chr5 (70-168)||(22870462-22870560)
chr5 (68-173)||(39181054-39181159)
chr5 (68-168)||(8654109-8654209)
chr5 (68-168)||(20072867-20072967)
chr5 (68-168)||(39181794-39181894)
[»] scaffold1493 (3 HSPs)
scaffold1493 (52-173)||(859-980)
scaffold1493 (1-168)||(595-762)
scaffold1493 (103-168)||(788-853)
[»] scaffold0206 (2 HSPs)
scaffold0206 (52-173)||(10322-10443)
scaffold0206 (104-173)||(10450-10519)
[»] scaffold0201 (3 HSPs)
scaffold0201 (1-173)||(13890-14062)
scaffold0201 (52-133)||(14159-14240)
scaffold0201 (103-167)||(14089-14153)
[»] scaffold0279 (3 HSPs)
scaffold0279 (1-168)||(10855-11026)
scaffold0279 (103-168)||(11052-11117)
scaffold0279 (68-156)||(11139-11227)
[»] scaffold0233 (3 HSPs)
scaffold0233 (68-173)||(8430-8535)
scaffold0233 (53-174)||(8699-8820)
scaffold0233 (1-41)||(8648-8688)
[»] scaffold0202 (3 HSPs)
scaffold0202 (1-168)||(14450-14616)
scaffold0202 (68-167)||(14238-14337)
scaffold0202 (103-156)||(14359-14412)
[»] scaffold0009 (2 HSPs)
scaffold0009 (52-168)||(261003-261119)
scaffold0009 (70-174)||(262441-262545)
[»] scaffold0022 (2 HSPs)
scaffold0022 (50-168)||(120464-120580)
scaffold0022 (103-170)||(120323-120390)
[»] scaffold0251 (1 HSPs)
scaffold0251 (70-173)||(12016-12119)
[»] scaffold0347 (2 HSPs)
scaffold0347 (70-168)||(13611-13709)
scaffold0347 (70-174)||(14593-14697)


Alignment Details
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22249902 - 22249729
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22249902 tgccacatgggcaccacgccgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 22249803  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    |||||||||||||||| ||||||||||||||||   |||||||||||||||||||| ||||||||||| |||||    
T  22249802 aggattagtaacttcatggacgaaaattcaaatgatctatatttgcagggacgaaaaacatatttaagcctttt 22249729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 53559602 - 53559775
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||| ||||||||||||||||| | |       ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  53559602 tgccacatgggcaccacgtcactaatgacagcccaccttagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgga 53559701  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    | |||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  53559702 acgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcctttt 53559775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 20086606 - 20086439
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  20086606 tgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaaacctaattaggactaaaagtcaaatgattaatatttgcaggggcagattgga 20086507  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  |||||||||  || ||||||| |||||||||||    
T  20086506 aggattagtaacttcagggacgaaaattcaaatgacctatatttatagagacgaaagacatatttaag 20086439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 54961646 - 54961815
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |       ||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  54961646 tgccacatgggcaccacgtcgctaatgacaacccacctcaccaaaaaaacctaattaggagcaaaagtcaaatgattaatatttacgggggcagattgaa 54961745  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||||||||||| |||| |||||||||||  ||||||||||||||||||||| |||||||||||||    
T  54961746 aggattagtaacttcagggactaaaattcaaatgacctatatttgcagggacgaaagacatatttaagtc 54961815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 13872238 - 13872071
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||| |||||||| ||||| |||| |    
T  13872238 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattagtatttgcaagggcatattgga 13872139  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  13872138 aggattaataacttcatggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaag 13872071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 12691621 - 12691786
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |       | ||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  12691621 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaac-taattaggaccaaaagtcaaatgattaatatttgcaggggcggattgga 12691719  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||| |||| |||||||||||  ||||||||||||||||||||| ||||||||||    
T  12691720 aggattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 12691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 33294359 - 33294525
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||||||||||||||||||||||| | |    
T  33294359 tgccacatgggcaccacgtcgc-aatgacagcccacctcagtaaaaaaatctaattaggaccaaaaatcaaatgattaatatttgcaggggcagatcgga 33294457  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  33294458 aggattagtaacttcagggacgaaaattcaaattgcctatatttgcagggaggaaagacatatttaag 33294525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 8287147 - 8287315
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||||||||||||||||| |||||||||||||||||||| |        |||||| |||||||||||||||||||||||  ||||||| |||||||||     
T  8287147 tgccacatgggcaccacgttgctaatgacagcccacctcagcaaaaaaaacctaatcaggaccaaaagtcaaatgattaaattttgcagtggcagattgg 8287246  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  8287247 aaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaag 8287315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 47981900 - 47982018
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  47981900 cctaattaggaccaaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatagtctatatttgcagg 47981999  T
Q  150 gacgaaacacatatttaag 168  Q
    ||||||| |||||||||||    
T  47982000 gacgaaagacatatttaag 47982018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 13872335 - 13872451
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  13872335 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaagaattagtaacttcagggacaaaaattcaaatagactatatttgcaggga 13872434  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  13872435 cgaaagacatatttaag 13872451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 47862367 - 47862533
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||| |||||||| ||||||||| ||||||||| |        ||||||||||||||||||||||||||||||||||||||||||| |||  |    
T  47862367 tgccacatgggtaccacgtcactaatgacatcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcaaattaga 47862466  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| |||||||||||||||| |||||||||| || |||||||| |||||||||||    
T  47862467 aggattagtaacttcatggacgaaaattcaaatggcctatatttaca-ggacgaaagacatatttaag 47862533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19916825 - 19916663
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||| |||||||||||| |||| || | |       ||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  19916825 tgccacatgggcaccacatcgctaatgacaacccaacttagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcagtggcagattgga 19916726  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatat 163  Q
    |||||||||||||||| || |||||||| ||||  ||||||||||||||||||||| ||||||    
T  19916725 aggattagtaacttcaggggcgaaaatttaaatgacctatatttgcagggacgaaagacatat 19916663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 12691524 - 12691408
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||| |||    
T  12691524 taattaggaccaaaagtcaaatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcatgga 12691425  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  12691424 cgaaagacctatttaag 12691408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 22249999 - 22250115
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||| |||| |||||||||||||||| |||||||||||||||||    
T  22249999 taattaggactaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcaggga 22250098  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  22250099 cgaaagacatatttaag 22250115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 34238588 - 34238474
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| || |||    
T  34238588 taattatgaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaacttcagagacgaaaattcaaatagcctatatttacaagga 34238489  T
Q  152 cgaaacacatattta 166  Q
    ||||| || ||||||    
T  34238488 cgaaagacctattta 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 54961549 - 54961427
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| || |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  54961549 taattatgatcaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcaggga 54961450  T
Q  152 cgaaacacatatttaagtctttt 174  Q
    ||||| || |||||||| |||||    
T  54961449 cgaaagacctatttaagcctttt 54961427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37678017 - 37677850
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||| | ||||||| ||||||||| | |       |||||||| |||||||||||||||||||||  ||||||| ||||||| | |    
T  37678017 tgccacatgggcaccacgccactaatgatagcccaccttagcaaaaaaacctaattatgaccaaaagtcaaatgattaaattttgcagtggcagatcgga 37677918  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  37677917 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaag 37677850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 47980803 - 47980686
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||| |||||| |||||||||| |||||||||||||||| | |||||||||||||||    
T  47980803 taattaggatcaaaagtcaaatgattaatatttgcagggatagattggaaggatcagtaacttcagggacgaaaattcaaatggtctatatttgcaggga 47980704  T
Q  152 cgaaacacatatttaagt 169  Q
    ||||| || |||||||||    
T  47980703 cgaaagacctatttaagt 47980686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 50246021 - 50245871
Alignment:
Q  6 catgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggat 105  Q
    |||||||||||||||||||||||||| |||||| | |       |||||||| ||| |||||||||||||||||||||||||| ||||||||| || |||    
T  50246021 catgggcaccacgtcgctaatgacagtccaccttagcgaaaaaacctaattaagactaaaagtcaaatgattaatatttgcagtggcagattggaatgat 50245922  T
Q  106 tagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||| ||| ||||||||||||  ||||||||| |||||||||||    
T  50245921 tagtaacttcatggatgaaaattcaaatgacctatatttacagggacgaaa 50245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 33294262 - 33294146
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||| |||||||||||| |||    
T  33294262 taattatgaccaaaagttaaatgattaatatttgcaggggcaaattggaaggattagtaacttcatggacaaaaattcaaataacctatatttgcatgga 33294163  T
Q  152 cgaaacacatatttaag 168  Q
    | ||| |||||||||||    
T  33294162 caaaaaacatatttaag 33294146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 47862270 - 47862154
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||  | ||||||||||||||    
T  47862270 taattaggacaaaaagtcaaatgattagtatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacatatatttgcaggga 47862171  T
Q  152 cgaaacacatatttaag 168  Q
     |||| || ||||||||    
T  47862170 tgaaagacctatttaag 47862154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 19916938 - 19917038
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||||  ||||||||||||||||||||| || |||||||    
T  19916938 tcaaatgattaatatttgcagtggcagattgaaatgattagtaacttcaaagacgaaaatttaaatgacctatatttgcagggacgaaaaacctatttaa 19917037  T
Q  168 g 168  Q
    |    
T  19917038 g 19917038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 37678130 - 37678230
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| |||| || ||||||||||||||||||| || |||||||    
T  37678130 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaatttaaatggcttatatttgcagggacgaaagacctatttaa 37678229  T
Q  168 g 168  Q
    |    
T  37678230 g 37678230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 26601342 - 26601423
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| || |||||||||||||| ||||||||||||||||    
T  26601342 taattaggaccaaaagtcaaatgattaatatttgcatgggcatattggaatgattagtaacttcatggacgaaaattcaaat 26601423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 48507681 - 48507798
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    |||||||| |||||||||||||||||||||  ||||  | ||||||||| |||||||||||||||||  |||||||||||||||  |||||||||| |||    
T  48507681 cctaattaagaccaaaagtcaaatgattaaattttgttgtggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttgtagg 48507780  T
Q  150 gacgaaacacatatttaa 167  Q
    ||||||| || |||||||    
T  48507781 gacgaaagacctatttaa 48507798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 50246140 - 50246228
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||    
T  50246140 tcaaatgattaatatttgcagtgacagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 50246228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 53559505 - 53559441
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  53559505 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattaataacttca 53559441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 27813263 - 27813434
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-----ctaattaggaccaaaagtcaaatgattaatatttgcaggggcaga 95  Q
    |||||||||||||||||||||||||||||||  |||||||||             ||||||| ||||||||||||| | |||||  ||||||| ||||||    
T  27813263 tgccacatgggcaccacgtcgctaatgacagttcacctcaacaacaaaaaaaaaactaattatgaccaaaagtcaagtaattaaattttgcagtggcaga 27813362  T
Q  96 ttgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||| ||||||||||||||||| || || |||||||||| || |||| |||||||||||||| || ||||||||    
T  27813363 ttggaaggattagtaacttcaggggcggaaattcaaatggcgtata-ttgcagggacgaaagacttatttaag 27813434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 53475947 - 53475833
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    |||||||| |||| |||||||||||||||||||| |||||  ||||||||||||||||||| | ||| ||||| |||||| | |||||||||||  || |    
T  53475947 attaggactaaaactcaaatgattaatatttgcaagggcaatttgaaaggattagtaactttagggatgaaaactcaaatggtctatatttgcaaagatg 53475848  T
Q  154 aaacacatatttaag 168  Q
    ||| |||||||||||    
T  53475847 aaagacatatttaag 53475833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 8287034 - 8286934
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  |||| | || |||||||| ||||||||  ||||||||||||||| || ||||||||||||||||||| || |||||||    
T  8287034 tcaaatgattaatatttgcaatggcaaaatggaaggattattaacttcagagacgaaaattcaaatggcttatatttgcagggacgaaagacctatttaa 8286935  T
Q  168 g 168  Q
    |    
T  8286934 g 8286934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 35730943 - 35731031
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||||  | || | || ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  35730943 tcaaatgattaatatttgcaatgacataatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 35731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 32846464 - 32846364
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  |||| | || |||||||| |||||||| | |||||||||||||| ||||||||||||| | |||||| || |||||||    
T  32846464 tcaaatgattaatatttgcaatggcaaaatggaaggattaataacttcaggaacgaaaattcaaatggcctatatttgcaagcacgaaagacctatttaa 32846365  T
Q  168 g 168  Q
    |    
T  32846364 g 32846364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 52339307 - 52339213
Alignment:
Q  58 ggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||| |||| |||| || |||  ||  |||||||||||||    
T  52339307 ggaccaaaagtcaagtgattaatatttgcagggaaagattgaaaggattagtaaattcagggaccaaaactctaatgacccctatttgcagggac 52339213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 37678108 - 37678043
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  37678108 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 37678043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 19740933 - 19740862
Alignment:
Q  97 tgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||| ||||||||||||||||  | |||||||||| |||||||| || ||||||||    
T  19740933 tgaaaggattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaag 19740862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 54590261 - 54590146
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||| |||| |||||||||||||||||| || |||| | || ||| |||||||| ||||| || ||||| ||||||  |||||| |||||||||    
T  54590261 taattaggacgaaaattcaaatgattaatatttgtagaggcaaaatggaagaattagtaagttcaaagatgaaaaatcaaatgacctataattgcaggga 54590162  T
Q  152 cgaaacacatatttaa 167  Q
     ||||  |||||||||    
T  54590161 tgaaatgcatatttaa 54590146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 34238734 - 34238847
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    |||||||||||| ||||||||||||||||||||||||| ||       ||||  |||||||| |||| ||||||||||| ||||   |||||||||||||    
T  34238734 cctaattaggactaaaagtcaaatgattaatatttgcatgg-------gaaaaaattagtaatttcagggacgaaaatttaaatgatctatatttgcagg 34238826  T
Q  150 gacgaaacacatatttaagtc 170  Q
     |||||| | |||||||||||    
T  34238827 aacgaaaaatatatttaagtc 34238847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 8287056 - 8287121
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||| |||||| || ||||||||    
T  8287056 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 8287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 12691530 - 12691595
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  12691530 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaag 12691595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 33294268 - 33294333
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||  ||||||||||||||||  |||||||||||||||| |||| |||||||||||    
T  33294268 gattagtaacttccgggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaag 33294333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 35730921 - 35730868
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  35730921 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcatggacgaaa 35730868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 37732367 - 37732294
Alignment:
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    ||||||||||||||||||  ||||||||||||||  | |||||||||||||| |||| || |||||||||||||    
T  37732367 aaggattagtaacttcaaaaacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaagtcttt 37732294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 47862276 - 47862341
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  47862276 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 47862341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 489352 - 489235
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||| ||||||||||||||||||| |||| ||||||||| |       |||||||||||| ||||||||||| |||||  ||| ||  || |||||| |    
T  489352 tgccaaatgggcaccacgtcgctaacgacaacccacctcagcaaaaaaacctaattaggactaaaagtcaaataattaaatttttcaatggtagattgga 489253  T
Q  101 aggattagtaacttcaag 118  Q
    ||||||||||| ||||||    
T  489252 aggattagtaatttcaag 489235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 515144 - 515027
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||| ||||||||||||||||||| |||| ||||||||| |       |||||||||||| ||||||||||| |||||  ||| ||  || |||||| |    
T  515144 tgccaaatgggcaccacgtcgctaacgacaacccacctcagcaaaaaaacctaattaggactaaaagtcaaataattaaatttttcaatggtagattgga 515045  T
Q  101 aggattagtaacttcaag 118  Q
    ||||||||||| ||||||    
T  515044 aggattagtaatttcaag 515027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 20086703 - 20086767
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttca 116  Q
    |||||||||| |||||||||||||||||||||||||  | |||||| ||||||||| ||||||||    
T  20086703 taattaggacaaaaagtcaaatgattaatatttgcaaagccagattaaaaggattaataacttca 20086767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 20601049 - 20600961
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||| ||||||| |||||| |||| |||| ||| ||||| ||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  20601049 tcaaattattaatagttgcagtggcaaattggaagaattagcaacttcaaaaacgaaaattcaaatgacctatatttgaagggacgaaa 20600961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 45199229 - 45199141
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||  |||||||||||| ||    ||||||||| |||||||||    
T  45199229 tcaaatgattaatatttgcactgtcatattgaaaggattagtaacttcagagacgaaaattcagatgatttatatttgcggggacgaaa 45199141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 165
Target Start/End: Complemental strand, 9254522 - 9254411
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    ||||||||||||  |||| ||||||| | ||||||||  | | | | ||||||||||| |||||||| |||| ||||||| ||||||||||||||||| |    
T  9254522 attaggaccaaatttcaagtgattaacaattgcagggaaataataagaggattagtaagttcaaggatgaaatttcaaatggcctatatttgcagggatg 9254423  T
Q  154 aaacacatattt 165  Q
    |||  |||||||    
T  9254422 aaatgcatattt 9254411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 48507538 - 48507605
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||||||||| ||||||||||||||||  | ||||||||||||||||||| |  ||||||||||    
T  48507538 gattagtaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaagatctatttaagtc 48507605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 53477064 - 53477178
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    ||||||| ||||  |||||||||||||||||||||||||| | ||  ||||||||||| ||||  || ||||| ||||||  |||||| |||||| || |    
T  53477064 attaggaacaaatttcaaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagagatgaaaaatcaaatgacctataattgcagagatg 53477163  T
Q  154 aaacacatatttaag 168  Q
    |||  ||||||||||    
T  53477164 aaatgcatatttaag 53477178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 13336819 - 13336936
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    ||||| |||||||||  |||| ||||||| | ||||||||  ||| ||  ||||||||||| |||| ||| |||| |||||||  |||||||||||||||    
T  13336819 ctaataaggaccaaatttcaagtgattaacaattgcagggaaagaatgggaggattagtaagttcagggatgaaatttcaaatgacctatatttgcaggg 13336918  T
Q  151 acgaaacacatatttaag 168  Q
    | ||||  ||||||||||    
T  13336919 atgaaatgcatatttaag 13336936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 20086697 - 20086632
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| |||||||||||||||   |||||||||||||||| |||| || ||||||||    
T  20086697 gattagtaacttcagggacgaaaattcaaaggacctatatttgcagggatgaaagacctatttaag 20086632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 22249993 - 22249928
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||| ||||||||||||  |||||||||||||||| |||| || ||||||||    
T  22249993 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaag 22249928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 34238594 - 34238659
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||| ||||||||||| |||| || ||||||||    
T  34238594 gattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggatgaaaaacctatttaag 34238659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 47980809 - 47980874
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  ||| |||||||||||| |||| || ||||||||    
T  47980809 gattagtaacttcatggacgaaaattcaaatgacctgtatttgcagggatgaaagacctatttaag 47980874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 53559511 - 53559564
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| ||||    
T  53559511 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 53559564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 489466 - 489542
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatattt 144  Q
    ||||||||||||||||||||  |||| | || ||||||||||||||||  |||||||||| ||||  ||||||||||    
T  489466 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttctgggacgaaaatccaaacggcctatattt 489542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 515258 - 515334
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatattt 144  Q
    ||||||||||||||||||||  |||| | || ||||||||||||||||  |||||||||| ||||  ||||||||||    
T  515258 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttctgggacgaaaatccaaacggcctatattt 515334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 35730767 - 35730731
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgca 87  Q
    |||||||||||||||||||||||||||||||||||||    
T  35730767 ctaattaggaccaaaagtcaaatgattaatatttgca 35730731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 37732397 - 37732461
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||| | ||||||||||||||| ||||||||| |||||||| || || ||||||||    
T  37732397 attagtaacttcaggaacgaaaattcaaataacctatatttacagggacgtaaaacctatttaag 37732461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 27813151 - 27813045
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| ||||||||  | || | || |||||| |||||||||| |||  |||||||||||  | ||||||||||||||| ||| || |||||||    
T  27813151 tcaaatgattagtatttgcaatgacaaaatggaaggatcagtaacttcatggataaaaattcaaatgacttatatttgcagggacaaaagacttatttaa 27813052  T
Q  168 gtctttt 174  Q
    || ||||    
T  27813051 gtttttt 27813045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 56556684 - 56556578
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  56556684 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 56556585  T
Q  168 gtctttt 174  Q
    | |||||    
T  56556584 gcctttt 56556578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 54591560 - 54591676
Alignment:
Q  54 attaggaccaaaagtcaaatgattaata--tttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||| |||| ||||||||||||||  |||||||||||| | ||  ||| ||||||| |||| ||| ||||| ||||||   ||||| |||||||||    
T  54591560 attaggacgaaaattcaaatgattaatatttttgcaggggcaaaatgggaggtttagtaagttcagggatgaaaaatcaaatgatctataattgcaggga 54591659  T
Q  152 cgaaacacatatttaag 168  Q
     ||||  ||||||||||    
T  54591660 tgaaatgcatatttaag 54591676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 13872329 - 13872265
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||  |||||||||||  | |||||||||||||| |||| || |||||||    
T  13872329 gattagtaacttcaaggataaaaattcaaatgacatatatttgcagggatgaaagacctatttaa 13872265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 27813181 - 27813237
Alignment:
Q  112 cttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||| ||||||||||||||||   |||||||||||||||||||| || ||||||||    
T  27813181 cttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaag 27813237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 20601211 - 20601266
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggatt 106  Q
    ||||||| || |||||||||||||||| |||||||||  | |||||||||||||||    
T  20601211 ctaattatgatcaaaagtcaaatgatttatatttgcaatgacagattgaaaggatt 20601266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32846575 - 32846614
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctca 40  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  32846575 tgccacatgggcaccaagtcgctaatgacagtccacctca 32846614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 35730713 - 35730659
Alignment:
Q  119 gacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    |||||||||||||||  | ||||||||||||||||||| || |||||||| ||||    
T  35730713 gacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaagccttt 35730659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 489443 - 489378
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||| || | ||||| |||||||||   ||||||||||||||||||||| || ||||||||    
T  489443 gattagtaaatttagggacggaaattcaaacgacctatatttgcagggacgaaagacctatttaag 489378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 515235 - 515170
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||| || | ||||| |||||||||   ||||||||||||||||||||| || ||||||||    
T  515235 gattagtaaatttagggacggaaattcaaacgacctatatttgcagggacgaaagacctatttaag 515170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 52815765 - 52815660
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||| |||||| || || |||||||| | ||||||||||||||| |||| |||  |||| |||||  ||||||| || |||||| ||||  |||||||||    
T  52815765 tcaagtgattagtaattacaggggcaaaatgaaaggattagtaagttcagggataaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 52815666  T
Q  168 gtcttt 173  Q
    | ||||    
T  52815665 gccttt 52815660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 52816421 - 52816526
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| ||||  || ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  52816421 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagagatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaa 52816520  T
Q  168 gtcttt 173  Q
    | ||||    
T  52816521 gccttt 52816526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 53753400 - 53753437
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcagg 89  Q
    ||||||||||||||||||||||||||| || |||||||    
T  53753400 taattaggaccaaaagtcaaatgattagtaattgcagg 53753437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 20601072 - 20601136
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||| |||||||| |||||||||||| |||  |||||| || || |||||||| |||||||||||    
T  20601072 attaataacttcagggacgaaaattcgaatgacctataattacaaggacgaaagacatatttaag 20601136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 38813656 - 38813556
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||| |||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  38813656 tcaaattattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 38813557  T
Q  168 g 168  Q
    |    
T  38813556 g 38813556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 56557323 - 56557423
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| ||  ||||| ||||  |||||||||    
T  56557323 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattagagggatgaaaagcatatttaa 56557422  T
Q  168 g 168  Q
    |    
T  56557423 g 56557423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 89)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 43866926 - 43867093
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43866926 tgccacatgggcaccacgccgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 43867025  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||||||||||| |||||||||||    
T  43867026 aggattagtaacttcatggacgaaaattcaaatggtctatatttgcagggacgaaaaacatatttaag 43867093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 41182111 - 41182284
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||  |       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41182111 tgccacatgggcaccacgtcgctaatgacagcccacctcggcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 41182210  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    | |||||||||||||| ||||||||||||||||  | ||||||||||||||||||| ||||||||||| |||||    
T  41182211 atgattagtaacttcagggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcctttt 41182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 36623522 - 36623354
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||||||||||||||||||||||||||||||||| |||| |         ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36623522 tgccacatgggcaccacgtcgctaatgacagcccaactcagcaaaaaaaaactaattaggaccaaaagtcaaatgattaatatttgcaggagcagattga 36623423  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  36623422 aaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaaaacatatttaag 36623354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 27856957 - 27857123
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||| ||||||||||||||| | |       | |||||||||||||||||||||||||||||||||||| |||||||||| |    
T  27856957 tgccacatgggcaccacgtcgccaatgacagcccaccttagcaaaaaaacataattaggaccaaaagtcaaatgattaatatttgcaagggcagattgga 27857056  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    | |||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  27857057 atgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaa 27857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 41801985 - 41801816
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||| ||||||||||||||||||| ||||||||||||| |       |||||||| || ||||||||||||||||||||||||||||||||||||| |    
T  41801985 tgccacgtgggcaccacgtcgctaataacagcccacctcagcaaaaaaacctaattatgatcaaaagtcaaatgattaatatttgcaggggcagattgga 41801886  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||||||||||| | ||||||||||||||  ||||||||||||||||||||| |||||||||||||    
T  41801885 aggattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaaaaacatatttaagtc 41801816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37342951 - 37342784
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||| ||||||||||||| ||||||||| |       ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37342951 tgccacatgggcaccatgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcggattgaa 37342852  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| | |||||||||||||| | || ||||||||||||||||| | |||||||||    
T  37342851 aggattagtaacttcaggaacgaaaattcaaatggtctgtatttgcagggacgaaaaagatatttaag 37342784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23424727 - 23424894
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||  ||||| ||||||||| |||||||||||| |       ||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  23424727 tgccacatggataccacatcgctaatgtcagcccacctcagcaacaaaacctaattaggaccaaaaatcaaatgattaatatttgcaggggcagattgga 23424826  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    | |||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  23424827 atgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaaagacatatttaag 23424894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 40525722 - 40525889
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||| |||||||||||| ||||||||| |       ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40525722 tgccacatgggcaccacttcgctaatgacatcccacctcatcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgga 40525821  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    | ||||||||| |||| ||||||||||||||||| ||||||||| |||||||| || | |||||||||    
T  40525822 atgattagtaatttcagggacgaaaattcaaataacctatatttacagggacggaagatatatttaag 40525889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 11478263 - 11478142
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  11478263 taattagggccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcaggga 11478164  T
Q  152 cgaaacacatatttaagtcttt 173  Q
    ||||| || |||||||| ||||    
T  11478163 cgaaaaacctatttaagccttt 11478142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 25287910 - 25287789
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |||||| ||||||    
T  25287910 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacaggga 25287811  T
Q  152 cgaaacacatatttaagtcttt 173  Q
    ||||| ||||||||||| ||||    
T  25287810 cgaaagacatatttaagccttt 25287789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 20096235 - 20096394
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaa---tatttgcaggggcagat 96  Q
    |||||||||||||||||||||||||||||||||||||||| |        ||||||||||||||||| ||||||||||||   |||||||| ||||||||    
T  20096235 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggaccaaaattcaaatgattaaatatatttgcatgggcagat 20096334  T
Q  97 tgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    || ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  20096335 tggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 20096394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 11478360 - 11478508
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||| |       ||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  11478360 tgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaaatcaaatgattaatatttgcaggggcagattgga 11478459  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    |||||||||||||||| |||||||| ||||||| | |||||||| ||||    
T  11478460 aggattagtaacttcagggacgaaagttcaaatggtctatatttacagg 11478508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 36623619 - 36623740
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||| |||||||||||||||| |||||||||||||||||    
T  36623619 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcaggga 36623718  T
Q  152 cgaaacacatatttaagtcttt 173  Q
    ||||| ||||||||||| ||||    
T  36623719 cgaaagacatatttaagccttt 36623740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 7659 - 7775
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  7659 taattatgaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatggcctatatttgcaggga 7758  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  7759 cgaaagacctatttaag 7775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 43866829 - 43866713
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||| |||||||||||||||| |||||||||||||||||    
T  43866829 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcaggga 43866730  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  43866729 cgaaagacatatttaag 43866713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 40422326 - 40422162
Alignment:
Q  5 acatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    ||||||||||||||||||||||||||||||| |||| |        ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  40422326 acatgggcaccacgtcgctaatgacagcccatctcagcaaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcagtggcagattggaagg 40422227  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||| ||||||  |||||||||||| ||  ||||||||||||||||||||| || ||||||||    
T  40422226 attagttacttcagagacgaaaattcatatgacctatatttgcagggacgaaagacctatttaag 40422162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 29190329 - 29190162
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||| || |||||||||          ||||||||||||||||||||||||||||||||||||||||  |||||| |    
T  29190329 tgccacatgggcaccacgtcgctaatggcaacccacctcaggaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcagggatagattgga 29190230  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||  |||||||||||| || ||||||||||||||||| |||| | |||||||||    
T  29190229 aggattagtaacttcagagacgaaaattcagatggcctatatttgcagggaggaaagatatatttaag 29190162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 26739934 - 26740100
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncct-aattaggaccaaaagtcaaatgattaatatttgcagggg-cagattgaaa 101  Q
    ||||||| |||||| |||||||||||||||||||||| |        || |||||| |||||||||||||||||||||||||| ||||| ||||||| ||    
T  26739934 cacatggacaccacatcgctaatgacagcccacctcagcaaaaaaaacttaattagaaccaaaagtcaaatgattaatatttgtagggggcagattgcaa 26740033  T
Q  102 ggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  26740034 ggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 26740100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 171
Target Start/End: Original strand, 37343048 - 37343167
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||| ||||||||||||||||  |||||||||||||||     
T  37343048 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatgacctatatttgcagggg 37343147  T
Q  152 cgaaacacatatttaagtct 171  Q
    ||||| ||||||||||||||    
T  37343148 cgaaagacatatttaagtct 37343167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 547550 - 547444
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| |||| |||||||||||||||    
T  547550 cctaattaggaccaaaagtgaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaatttaaatggcctatatttgcagg 547451  T
Q  150 gacgaaa 156  Q
    |||||||    
T  547450 gacgaaa 547444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 35163671 - 35163500
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-----cctaattaggaccaaaagtcaaatgattaatatttgcaggggcaga 95  Q
    |||||||||||||||||||||||||||||| ||||||||| |            |||||||| |||||||||||||||||||||  ||||||| ||||||    
T  35163671 tgccacatgggcaccacgtcgctaatgacaccccacctcagcaaaaaaaaaaaacctaattatgaccaaaagtcaaatgattaaattttgcagtggcaga 35163572  T
Q  96 ttgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||| ||||||||||||||||||||||||||| || |||||||||||||| |||| || |||||||    
T  35163571 ttgaaaggatcagtaacttcaaggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaa 35163500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 7562 - 7396
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||| ||||||||||||||||||||| |||| ||| |       |||||||| ||||||||||||||||||||||||||| |||| ||  ||| |    
T  7562 tgccacatgagcaccacgtcgctaatgacagtccacttcagcaaaaaaacctaattatgaccaaaagtcaaatgattaatatttgtagggacatgttgga 7463  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    || ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||| ||||||||||    
T  7462 agaattagtaacttcagggaagaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 7396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 40525625 - 40525504
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||  | |||||||||||| |    
T  40525625 taattaggaccaaaagtcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttgcaggaa 40525526  T
Q  152 cgaaacacatatttaagtcttt 173  Q
    ||||| || |||||||| ||||    
T  40525525 cgaaagacttatttaagccttt 40525504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 41251390 - 41251507
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| |||||||||| |  ||||||||||||    
T  41251390 cctaattatgaccaaaagtcaaatgattaatatttgcaggggtagattgaaatgattagtaacttcatggacggaaattcaaatggtttatatttgcagg 41251489  T
Q  150 gacgaaacacatatttaa 167  Q
    ||||||| | ||||||||    
T  41251490 gacgaaagatatatttaa 41251507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 20096138 - 20096023
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||| |||| |||||||||||  | ||||||||||||||    
T  20096138 taattaggaccaaaagtcaaatgattaatatttgcagaggcaaattggaaggattagtaacttcagggacaaaaattcaaatgacatatatttgcaggga 20096039  T
Q  152 cgaaacacatatttaa 167  Q
    ||||| || |||||||    
T  20096038 cgaaagacctatttaa 20096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 29190425 - 29190540
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||| | |||||||||||||||    
T  29190425 taattaggactaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatggtctatatttgcaggga 29190524  T
Q  152 cgaaacacatatttaa 167  Q
    ||||| || |||||||    
T  29190525 cgaaagacctatttaa 29190540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 547701 - 547805
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||| | ||||||||||||||||   |||||||||||||||    
T  547701 taattaggaccaaaagtcaaatgattaatatttgtagtggcagattggaaggattagtaactttagggacgaaaattcaaatgatctatatttgcaggga 547800  T
Q  152 cgaaa 156  Q
    |||||    
T  547801 cgaaa 547805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31690110 - 31690279
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||||||||||| |||||| ||||||||| ||||||||| |         |||| || |||||||||| ||||||||||||||||||| |||||||||     
T  31690110 tgccacatgggcatcacgtcactaatgacaacccacctcagcaaaaaaaaactaactatgaccaaaagttaaatgattaatatttgcagtggcagattgg 31690209  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    || |||||||||||||| |||||||||||| |||  ||||||||| ||||||||||| |||||||||||||    
T  31690210 aatgattagtaacttcagggacgaaaattc-aatgacctatatttacagggacgaaatacatatttaagtc 31690279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 23424630 - 23424514
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||| |||| |||||||||||  ||||||||| ||||||    
T  23424630 taattaggatcaaaagtcaaatgattaatatttgcaggggcagattgttagaattagtaacttcagggacaaaaattcaaatgacctatatttacaggga 23424531  T
Q  152 cgaaacacatatttaag 168  Q
     |||| || ||||||||    
T  23424530 tgaaagacctatttaag 23424514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 41251241 - 41251125
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| ||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||  ||||||||||||| |  ||||||||||||||||    
T  41251241 taattatgaccaaaagtcaaatgattaatatttgtagggacatattggaaggattagtaacttcagagacgaaaattcaattgacctatatttgcaggga 41251142  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  41251141 cgaaagacctatttaag 41251125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 25288007 - 25288174
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||| |||| |||||||| ||||||||||||||| ||| |       ||||||||| |||||||||||||||||||||||||||||||||| | |||     
T  25288007 tgccacttgggtaccacgtcactaatgacagcccacttcagcaaaaaaacctaattagaaccaaaagtcaaatgattaatatttgcaggggcaaaatgag 25288106  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| |||| ||| ||||| ||||||  |||||| |||||| || ||||  ||||||||||    
T  25288107 aggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaag 25288174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 40422442 - 40422542
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || |||||||    
T  40422442 tcaaatgattaatatttgcagtggcagatttgaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 40422541  T
Q  168 g 168  Q
    |    
T  40422542 g 40422542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 9632531 - 9632691
Alignment:
Q  14 ccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaact 113  Q
    ||||||||||||||||| ||||||| | |       ||||||||||||||||| ||| |||| |||  ||| ||| | || |||| ||||||||||||||    
T  9632531 ccacgtcgctaatgacaacccacctaagcaaaaacacctaattaggaccaaaactcagatgactaaattttacagtgacacattggaaggattagtaact 9632630  T
Q  114 tcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    ||||||||||||||||||||  ||||||||||||||||| ||| || |||||||| |||||    
T  9632631 tcaaggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcctttt 9632691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 22763810 - 22763966
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||||||| |||||||||||||||||||||||||||||| |        || ||||| |||||||||||||||||||||||||| ||  | |||||||     
T  22763810 tgccacatgagcaccacgtcgctaatgacagcccacctcagcaaaaaaagccaaattatgaccaaaagtcaaatgattaatatttacaatgacagattgg 22763909  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||||||  ||||||||||||||| |  ||||  |||||||||||||    
T  22763910 aaggattagtaacttcagagacgaaaattcaaatggtttatagctgcagggacgaaa 22763966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 38600218 - 38600320
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    ||||||||||||| ||||||||||||  ||||||| ||| | ||||||||||||||||||||| |||||||| |||||||  ||||||||||||||||||    
T  38600218 attaggaccaaaactcaaatgattaaattttgcagtggctgtttgaaaggattagtaacttcagggacgaaatttcaaatgacctatatttgcagggacg 38600317  T
Q  154 aaa 156  Q
    |||    
T  38600318 aaa 38600320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 26739835 - 26739754
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||| |||| ||||||||||||||||    
T  26739835 taattaggaccaaacgtcaaatgattaatatttgcagggacatattgaaaggattagtaatttcagggacgaaaattcaaat 26739754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 38619906 - 38619812
Alignment:
Q  62 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||   ||||||||||||| ||||||    
T  38619906 caaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcaggaacgaaa 38619812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 27856860 - 27856787
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaa 125  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  27856860 taattaagaccaaaagtcaaatgattaatatttgcaggggcggattggaaggattagtaacttcagggacgaaa 27856787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 31689997 - 31689897
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||| |||||||| |||| |||| ||||||| ||||||||| |||||||||||||||| | |||||||||||||||| ||| || |||||||    
T  31689997 tcaaatgattaacatttgcagtggcatattggaaggattggtaacttcatggacgaaaattcaaatggtctatatttgcagggacaaaagacctatttaa 31689898  T
Q  168 g 168  Q
    |    
T  31689897 g 31689897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 27437503 - 27437617
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    |||||||| |||  ||||||||||| || |||||| |||| | ||||| |||||||||||||| |||||||||||||||  ||||||||||||||||| |    
T  27437503 attaggactaaatttcaaatgattagtaattgcagtggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacggcctatatttgcagggatg 27437602  T
Q  154 aaacacatatttaag 168  Q
    |||  ||||||||||    
T  27437603 aaatgcatatttaag 27437617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 22763714 - 22763597
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    |||||||||||||    |||||||||||||||||| || || |||||  || |||||||||||||| ||||||||||||||||  |||||||||||| ||    
T  22763714 ctaattaggaccatttttcaaatgattaatatttgtagtggtagattagaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcaagg 22763615  T
Q  151 acgaaacacatatttaag 168  Q
    |||||| || ||||||||    
T  22763614 acgaaatacctatttaag 22763597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 27436681 - 27436565
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||| |||  ||||||||||| || |||||| |||| | ||||| |||||||||||||| |||||||||||||||   ||||||||||||||||    
T  27436681 taattaggactaaatttcaaatgattagtaattgcagtggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacgacctatatttgcaggga 27436582  T
Q  152 cgaaacacatatttaag 168  Q
     ||||  ||||||||||    
T  27436581 tgaaatgcatatttaag 27436565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 38599066 - 38598966
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||||||||||||| | ||| ||||||||||| |||| ||| ||||| |||||| ||||||| ||||||||| ||||  |||||||||    
T  38599066 tcaaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 38598967  T
Q  168 g 168  Q
    |    
T  38598966 g 38598966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 41802082 - 41802160
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattca 130  Q
    ||||||||| |||| |||||||||| |||||||||||||||| |||| || |||||||||||||||||| |||||||||    
T  41802082 taattaggatcaaatgtcaaatgataaatatttgcaggggcaaattggaatgattagtaacttcaaggatgaaaattca 41802160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 9632430 - 9632330
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  | || | || ||||||||||||||||| ||||||||||||||||  |||||||||||| |||| ||| || |||||||    
T  9632430 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaa 9632331  T
Q  168 g 168  Q
    |    
T  9632330 g 9632330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 23514123 - 23514023
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  |||| | |||||||||||||||||| |||| |||||||||||||   || ||||||||| ||||||| || |||||||    
T  23514123 tcaaatgattaatatttgcaatggcaaaatgaaaggattagtaactttaaggtcgaaaattcaaatgaactttatttgcagagacgaaagacttatttaa 23514024  T
Q  168 g 168  Q
    |    
T  23514023 g 23514023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 24529946 - 24530038
Alignment:
Q  76 ttaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||| ||||||| | |||||||||||||||||   ||||||||||||||  |||||||||||||| |||||| || ||||||||    
T  24529946 ttaatatttgcagtggcagataggaaggattagtaacttcagtaacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 24530038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 37713798 - 37713699
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  || |||||||||| |||| |||||||| ||||||||||||||||  | |||||||  |||||||||| || |||||||    
T  37713798 tcaaatgattaatatttgcaatggtagattgaaagaattaataacttcatggacgaaaattcaaatgacttatatttatagggacgaaagacctatttaa 37713699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 22763719 - 22763784
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||| || ||||||||    
T  22763719 gattagtaacttcagggacgaaaattcaaatagcagatatttgcagggacgaaagacctatttaag 22763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 15716158 - 15716264
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||||| |  |||| | |  ||||||||||||||||| ||||||||||| ||||  | |||||||||| |||||||| || |||||||    
T  15716158 tcaaatgattaatatttgtaatggcaaaatagaaggattagtaacttcagggacgaaaatttaaatgacatatatttgcatggacgaaagacctatttaa 15716257  T
Q  168 gtctttt 174  Q
    || ||||    
T  15716258 gtttttt 15716264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 23514236 - 23514379
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||| |||||||| ||||||||||| |||||||| |       ||||||||  ||||||||||||||||||||  ||| || || || ||| ||    
T  23514236 tgccacatggacaccacgtggctaatgacagtccacctcatcaaaaaaacctaattaaaaccaaaagtcaaatgattaaattttacacggtcaaattaaa 23514335  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatattt 144  Q
    || ||||||||| ||||  |  |||||| |||||||||||||||    
T  23514336 agaattagtaacctcaaaaataaaaatttaaatagcctatattt 23514379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 41182023 - 41182085
Alignment:
Q  106 tagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  41182023 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 41182085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 547695 - 547630
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||| |||| || ||||||||    
T  547695 gattagtaacttcaaggacgaaaattcaaatgacctataattgcagggatgaaagacctatttaag 547630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 25287916 - 25287981
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  25287916 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 25287981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 31690019 - 31690084
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  ||||||||| ||||||||||| || ||||||||    
T  31690019 gattagtaacttcagggacgaaaattcaaatgacctatattttcagggacgaaaaacctatttaag 31690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 41251249 - 41251312
Alignment:
Q  105 ttagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  41251249 ttagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 41251312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 37713820 - 37713890
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    |||||||||||||| ||||||||||||| ||  |||||||||||| |||||||| | ||||||||| ||||    
T  37713820 gattagtaacttcagggacgaaaattcatatgacctatatttgcatggacgaaagatatatttaagccttt 37713890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 41802076 - 41802010
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagt 169  Q
    ||||| || ||||| |||||||||||||||| ||||||||||||||||| |||| || |||||||||    
T  41802076 gattattagcttcagggacgaaaattcaaatggcctatatttgcagggatgaaagacctatttaagt 41802010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 4463407 - 4463524
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    |||||||||||||||  |||| ||||||| | ||||||||  ||| |   ||||||||||| |||| ||| |||| ||||||| ||||||| ||||||||    
T  4463407 ctaattaggaccaaatttcaagtgattaacaattgcagggaaagaataggaggattagtaagttcagggatgaaatttcaaatggcctatacttgcaggg 4463506  T
Q  151 acgaaacacatatttaag 168  Q
    | ||||  ||||||||||    
T  4463507 atgaaatgcatatttaag 4463524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 4970243 - 4970162
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||||||||| |||  ||||||| |||||||||||||||||| | || |||||||||||| |||| ||| |||| |||||||    
T  4970243 taattaggactaaatttcaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaat 4970162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 11478269 - 11478334
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  11478269 gattagtaacttcagcgacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 11478334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 23424636 - 23424701
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||||| |||| || ||||||||    
T  23424636 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaag 23424701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 23514145 - 23514198
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||| ||||| |||||||||||||||||| |||||||| |||||||||||    
T  23514145 gattagtagcttcatggacgaaaattcaaatagtctatatttacagggacgaaa 23514198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 29190419 - 29190354
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| | ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  29190419 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 29190354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 37343042 - 37342977
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||| ||||||||||||  |||||||||||||||| |||| || ||||||||    
T  37343042 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 37342977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 40422420 - 40422371
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  40422420 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggac 40422371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 40525631 - 40525696
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  ||||||||| |||||| |||| || ||||||||    
T  40525631 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacctatttaag 40525696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 43866835 - 43866900
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||| ||||||||||||  |||||||||||||||| |||| || ||||||||    
T  43866835 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaag 43866900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 36574932 - 36574813
Alignment:
Q  55 ttaggaccaaaagtcaaatgattaatatttgcaggggcagatt-gaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    |||||||||||| |||||||||||||||||||||||  ||||| |  ||||||||||| |||| ||| |||| |||||||  ||||||| ||||| || |    
T  36574932 ttaggaccaaaactcaaatgattaatatttgcaggga-agatttgggaggattagtaagttcagggatgaaatttcaaatgccctatatatgcagagatg 36574834  T
Q  154 aaacacatatttaagtctttt 174  Q
    |||  ||||||| || |||||    
T  36574833 aaatgcatattttagcctttt 36574813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 13566512 - 13566413
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  |||| | || |||||| | ||||||||  ||| |||||||||||   || ||||||||||||||||| || |||||||    
T  13566512 tcaaatgattaatatttgcaatggcaaaatggaaggatcaataacttcagagacaaaaattcaaatgtactgtatttgcagggacgaaagacctatttaa 13566413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24529891 - 24529930
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctca 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  24529891 tgccacatgggcaccacgtcactaatgacagcccacctca 24529930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 7393129 - 7393231
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    |||||||| |||  |||||||||||||||||||||||  | | ||  ||||||||||| |||| ||| ||||| ||||||  |||||| ||||||||| |    
T  7393129 attaggactaaatttcaaatgattaatatttgcagggataaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatg 7393228  T
Q  154 aaa 156  Q
    |||    
T  7393229 aaa 7393231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 36623613 - 36623551
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    |||||||||||||| ||| ||||||||||||  |||||||||||||||| |||| || |||||    
T  36623613 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctattt 36623551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 9632452 - 9632505
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||  ||||||||||||||| | ||| ||||||||||||||||    
T  9632452 gattagtaacttcagtgacgaaaattcaaatggtctagatttgcagggacgaaa 9632505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 20096144 - 20096209
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||| ||||||||||||  |||||||||| ||||| |||| || ||||||||    
T  20096144 gattagtaacttcagggaagaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 20096209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 15716136 - 15716088
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||  |||||||||||||||  ||||||||||||||||    
T  15716136 gattagtaacttcagagacgaaaattcaaatgacctatatttgcaggga 15716088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 24529780 - 24529732
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttca 116  Q
    ||||||||||||||||||||  |||| |||| |||||||||||||||||    
T  24529780 tcaaatgattaatatttgcactggcacattggaaggattagtaacttca 24529732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 34665872 - 34665772
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  34665872 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 34665773  T
Q  168 g 168  Q
    |    
T  34665772 g 34665772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 13566534 - 13566601
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    ||||||||| |||||||||||||||||||||  ||| ||||||||| || |||| ||  |||||||||    
T  13566534 gattagtaaattcaaggacgaaaattcaaatgacctgtatttgcagtgatgaaagaccaatttaagtc 13566601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 165
Target Start/End: Complemental strand, 29574858 - 29574747
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    ||||||||||||  |||| ||||||| | ||||||||  | | || |||||||||||| || | ||| |||| |||||||  |||||||||||||||| |    
T  29574858 attaggaccaaatttcaagtgattaacaattgcagggaaaaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatg 29574759  T
Q  154 aaacacatattt 165  Q
    |||  |||||||    
T  29574758 aaatgcatattt 29574747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 36575996 - 36576031
Alignment:
Q  55 ttaggaccaaaagtcaaatgattaatatttgcaggg 90  Q
    |||||||||||| |||||||||||||||||||||||    
T  36575996 ttaggaccaaaactcaaatgattaatatttgcaggg 36576031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 33497614 - 33497720
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || ||||||||||| | ||  |||||||||||  ||| ||| ||||| ||||||  |||||| || |||||| ||||  |||||||||    
T  33497614 tcaaatgattagtaattgcaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatgccctataattacagggatgaaaagcatatttaa 33497713  T
Q  168 gtctttt 174  Q
    | |||||    
T  33497714 gcctttt 33497720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 39106282 - 39106312
Alignment:
Q  182 tgtgattcaccaatcaatgaattcacaattt 212  Q
    |||||||||||||||||||||||||||||||    
T  39106282 tgtgattcaccaatcaatgaattcacaattt 39106312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 7653 - 7600
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||| |||||| ||||||||||||||||  ||||||||| |||||| ||||    
T  7653 gattagtgacttcagggacgaaaattcaaatgacctatatttacagggatgaaa 7600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 29575867 - 29575980
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||  |||| ||||||| | ||||| ||  ||| ||  ||||||||||| || | ||| |||| ||||||| | |||||||||||||||    
T  29575867 taattaggaccaaatttcaagtgattaacaattgcatggaaagaatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcaggga 29575966  T
Q  152 cgaaacacatattt 165  Q
     ||||  |||||||    
T  29575967 tgaaatgcatattt 29575980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 35163762 - 35163697
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||   ||||||||||||||  |||||||||  |||||||||| || ||||||||    
T  35163762 gattagtaacttcagttacgaaaattcaaatgacctatatttatagggacgaaagacttatttaag 35163697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 41767732 - 41767652
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaa 131  Q
    |||||| ||||||||  | || |||||||||||||||| |||| ||||  ||||||||||| | || |||| |||||||||    
T  41767732 ctaatttggaccaaattttaagtgattaatatttgcagtggcaaattgggaggattagtaagtacagggactaaaattcaa 41767652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 41773595 - 41773675
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaa 131  Q
    |||||| ||||||||  | || |||||||||||||||| |||| ||||  ||||||||||| | || |||| |||||||||    
T  41773595 ctaatttggaccaaattttaagtgattaatatttgcagtggcaaattgggaggattagtaagtacagggactaaaattcaa 41773675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 43073593 - 43073565
Alignment:
Q  140 tatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||    
T  43073593 tatttgcagggacgaaacacatatttaag 43073565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 98)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 49003044 - 49002879
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49003044 tgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaa-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgga 49002946  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  49002945 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 49002879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 26953270 - 26953103
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||| |        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26953270 tgccacatgggcaccacgtcgctaatgacagcccagctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 26953171  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  26953170 aggattagtaacttcagggacgaaaattcaaatagtctatatttgcaaggacgaaagacatatttaag 26953103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29042970 - 29043137
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||  |||||||||| |         ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29042970 tgccacatgggcaccacgtcgctaatgatggcccacctcagcaaaaaaatttaattaggatcaaaagtcaaatgattaatatttgcaggggcagattgaa 29043069  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  29043070 aggattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaag 29043137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 33347585 - 33347418
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  33347585 tgccacatgggcaccacatcgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgtaggggcagattgga 33347486  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    || ||||||||||||| |||||||| |||||||  | ||||||||||||||||||| |||||||||||    
T  33347485 agaattagtaacttcagggacgaaagttcaaatgacttatatttgcagggacgaaagacatatttaag 33347418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 25415010 - 25414846
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    ||||||||||||||||||||||||||| | ||||||| |       ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25415010 cacatgggcaccacgtcgctaatgacaactcacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaagg 25414911  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||  || |||||||||||| ||||||||||| |||||||||| |||||||||||    
T  25414910 attagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaaagacatatttaag 25414846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 739433 - 739600
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |       ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  739433 tgccacatgggcaccacgtcgctaatgacagctcacctcagcaaaaaaacctaattaggatcaaaagtcaaatgattaatatttgcagggacagattgaa 739532  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| | ||||||||||||||  ||||||||||||| |||||||  ||||||||||    
T  739533 aggattagtaacttcatgtacgaaaattcaaatgacctatatttgcagagacgaaaatcatatttaag 739600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2953633 - 2953466
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||| ||||||||||| |||||||||||||||||| |        ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2953633 tgccacatgtgcaccacgtcgttaatgacagcccacctcagcaaaaaaatctaattatgaccaaaagtcaaatgattaatatttgcaggggcagattgaa 2953534  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| | ||||||||||||||||  ||||||||| ||||||||||| |||||||||||    
T  2953533 aggattagtaactttagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaag 2953466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5183675 - 5183508
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||| |||||||||||||||||| ||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5183675 tgccacatgtgcaccacgtcgctaatgatagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgga 5183576  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| | ||||||||||||||||  ||||||||| |||| |||||| |||||||||||    
T  5183575 aggattagtaactttatggacgaaaattcaaatgacctatattttcaggaacgaaagacatatttaag 5183508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 37152707 - 37152544
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |        |||||||||| ||||||||||||||||| |||||||| |||||||||| |    
T  37152707 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggatcaaaagtcaaatgattagtatttgcacgggcagattgga 37152608  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatt 164  Q
    |||||||||||||||| ||||||||||||||||  |||||||||| |||||||||| |||||||    
T  37152607 aggattagtaacttcatggacgaaaattcaaatgacctatatttgtagggacgaaagacatatt 37152544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 12577181 - 12577012
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaa-gtcaaatgattaatatttgcaggggcagattg 98  Q
    |||||||||||||| ||||||||||||||||| ||||||| |        ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12577181 tgccacatgggcactacgtcgctaatgacagctcacctcagcaaaaaaaacctaattaggaccaaaaagtcaaatgattaatatttgcaggggcagattg 12577082  T
Q  99 aaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||| ||||||||||||||  ||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  12577081 aaatgattagtaacttcatagacgaaaattcaaatggcctatatttacagggacgaaagacatatttaag 12577012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 6056594 - 6056761
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn--cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaa 101  Q
    ||||||||||||||||||||||||||||||||||||| |         |||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  6056594 cacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaacctaattatgaccaaatgtcaaatgattaatatttgcaggggcagattgaaa 6056693  T
Q  102 ggattagtaactt-caaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||| || ||| |||||||||||| || ||||||||||||||||||| |||||||||||    
T  6056694 ggattagtaacttacagggatgaaaattcaaatggcttatatttgcagggacgaaagacatatttaag 6056761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 24701439 - 24701267
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||| ||||||||||  ||||||| ||||||||| |    
T  24701439 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagttaaatgattaaattttgcagtggcagattgga 24701340  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    |||||||||||||||| ||||||||||||||||   |||||||||||| ||||||| || |||||||| ||||    
T  24701339 aggattagtaacttcagggacgaaaattcaaatgagctatatttgcagagacgaaagacttatttaagccttt 24701267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 1047419 - 1047586
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||  ||||||||||||||||||| ||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1047419 tgccacatgtacaccacgtcgctaatgacaacccacctcagctaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgga 1047518  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||  |||||||||||||||  ||||||||| |||||| |||| |||||||||||    
T  1047519 aggattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaag 1047586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 739337 - 739216
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  739337 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcaggga 739238  T
Q  152 cgaaacacatatttaagtcttt 173  Q
    ||||| || |||||||| ||||    
T  739237 cgaaaaacctatttaagccttt 739216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5926689 - 5926515
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    |||||||||||||||| ||| ||||| |||||||||||||||        |||||||| |||||||||||||||||||||| |||||||||||| ||||     
T  5926689 tgccacatgggcaccaggtcactaataacagcccacctcaacaaaaaaaacctaattaagaccaaaagtcaaatgattaatgtttgcaggggcatattgg 5926590  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||| ||| ||||    
T  5926589 aaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttcagtttttt 5926515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 2953730 - 2953846
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  2953730 taattaggaccaaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 2953829  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  2953830 cgaaagacatatttaag 2953846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 12577278 - 12577394
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | ||||||||||||||    
T  12577278 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaatttaaatgacttatatttgcaggga 12577377  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  12577378 cgaaagacctatttaag 12577394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 29980807 - 29980642
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||| || ||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29980807 tgccacatgggcaccacgttgcaaatgacagcccacctcagcaaaaaa-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgga 29980709  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    | |||||||||||||| || |||||||||||||  ||||||||| || |||||||| ||||||||||    
T  29980708 aagattagtaacttcatgggcgaaaattcaaatgacctatatttacaaggacgaaagacatatttaa 29980642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 46849827 - 46849661
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |       |||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  46849827 tgccacatgggcaccacgtcgctaatgatagcccacctcagcaaaaaaacctaattatgaccaaaagtcaaatgactaatatttacaggggcagattgaa 46849728  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    || |||| |||||||| ||||||||||||||||  ||||||||| ||||||||| | ||||| ||||    
T  46849727 agaattaataacttcagggacgaaaattcaaatgacctatatttacagggacgagagacatacttaa 46849661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 1040416 - 1040300
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| || |||||||||| |||    
T  1040416 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaagga 1040317  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  1040316 cgaaagacatatttaag 1040300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 1047322 - 1047206
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| || |||||||||| |||    
T  1047322 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaagga 1047223  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  1047222 cgaaagacatatttaag 1047206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 33347682 - 33347786
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  33347682 taattaggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcaggga 33347781  T
Q  152 cgaaa 156  Q
    |||||    
T  33347782 cgaaa 33347786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 37152804 - 37152920
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||| | |||||||||||||||    
T  37152804 taattaggactaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatggactatatttgcaggga 37152903  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  37152904 cgaaagacatatttaag 37152920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 5183772 - 5183888
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  5183772 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctatatttgcaggga 5183871  T
Q  152 cgaaacacatatttaag 168  Q
    | ||| || ||||||||    
T  5183872 caaaagacgtatttaag 5183888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 19755671 - 19755787
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||  ||||||||||||||||    
T  19755671 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcaggga 19755770  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  19755771 cgaaagacctatttaag 19755787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 46849924 - 46850040
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||||||||||||||  ||||||||||||||||    
T  46849924 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 46850023  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  46850024 cgaaagacctatttaag 46850040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 49003141 - 49003257
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  49003141 taattaggaccaaaaatcaaatgattaatatttgcagaggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcaggga 49003240  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  49003241 cgaaagacctatttaag 49003257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 49990061 - 49990178
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||||  |||||||| ||||||||| ||||||||||||||||| ||||||||||||||    
T  49990061 ctaattaagaccaaaagtcaaatgattaatatttgtaggggtagatttgaaggattaataacttcaaagacgaaaattcaaatagtctatatttgcaggg 49990160  T
Q  151 acgaaacacatatttaag 168  Q
    |||||| |||||||||||    
T  49990161 acgaaagacatatttaag 49990178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 46364841 - 46364945
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| | |||||||||||||     
T  46364841 taattaggatcaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcaaggacgaaaattcaaataacttatatttgcagggg 46364940  T
Q  152 cgaaa 156  Q
    |||||    
T  46364941 cgaaa 46364945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 168
Target Start/End: Complemental strand, 46364685 - 46364576
Alignment:
Q  59 gaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaaca 158  Q
    ||||||||||||||||||||||||||| |||| ||||| |||| |||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |    
T  46364685 gaccaaaagtcaaatgattaatatttgtagggacagatggaaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaga 46364586  T
Q  159 catatttaag 168  Q
    ||||||||||    
T  46364585 catatttaag 46364576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 5926787 - 5926903
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||||| ||| |||||||||||| | |||||||||||||||    
T  5926787 taattaggaccaaaagtcaaatgattactatttgcagaggcagattggacggattagtaacttcagggatgaaaattcaaatggtctatatttgcaggga 5926886  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  5926887 cgaaagacctatttaag 5926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 6056494 - 6056378
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||| || |||| |||||| ||||| || | ||||||||||||||||  ||||||||||||||||    
T  6056494 taattaggaccaaaagtcaaatgattaatatttgcagggacatattggaaggatcagtaattttagggacgaaaattcaaatgacctatatttgcaggga 6056395  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  6056394 cgaaagacatatttaag 6056378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 33030600 - 33030705
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||   |||||||||||||     
T  33030600 ctaattagaaccaaaagtcaaatgattaatatttgcagtggcagattgaaaggattagtaatttcatggacgaaaattcaaatgatctatatttgcagga 33030699  T
Q  151 acgaaa 156  Q
    ||||||    
T  33030700 acgaaa 33030705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 10019542 - 10019370
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    |||||||||||||||||||||||||||||||||||||||| |        ||||||||||| ||||||||||||||||||  ||||||   | ||||||     
T  10019542 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggatcaaaagtcaaatgattaaattttgcaatagtagattgg 10019443  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    |||||||||||||||| |||| ||||||| |||| ||||||||||||| |||||||| || | |||||||||||    
T  10019442 aaggattagtaacttc-aggatgaaaatttaaatggcctatatttgcatggacgaaagacctttttaagtcttt 10019370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 29980904 - 29981020
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||  ||||||||||||  ||    
T  29980904 taattaggaccaaaaatcaaatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctatatttgcaaaga 29981003  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  29981004 cgaaagacctatttaag 29981020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 8890378 - 8890214
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||| |||||||||||| |||||||||          ||||||| ||||||||||||||||||||||||||| || ||||||||| |    
T  8890378 tgccacatgggcaccacatcgctaatgacaacccacctca--gtaaaaatctaattacgaccaaaagtcaaatgattaatatttggagtggcagattgga 8890281  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    | |||||||||||||| |||| || ||||||||  ||||||||||||||||||||| || ||||||||    
T  8890280 aagattagtaacttcagggac-aatattcaaatgacctatatttgcagggacgaaatacctatttaag 8890214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 48380896 - 48381065
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn--cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattg 98  Q
    |||||||||| ||||||||||||||||||| ||||||| | |         | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  48380896 tgccacatggacaccacgtcgctaatgacaacccaccttagcaaaaaaaaacataattaggaccaaaagtcaaatgattaatatttgcagcggcagattg 48380995  T
Q  99 aaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
     |||||||| |||||| ||||||||||||| ||||    ||||||| ||||||||||| || ||||||||    
T  48380996 gaaggattaataactttaaggacgaaaatttaaatgaattatatttacagggacgaaagacttatttaag 48381065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 25415110 - 25415226
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||| ||||||||||||||  || |||| ||||||||||||||||| | ||||||||||||||  | ||||||||||||||    
T  25415110 taattaggaccaaaagtcaaatggttaatatttgcaggaacatattggaaggattagtaacttcaggaacgaaaattcaaatgacttatatttgcaggga 25415209  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| | |||||||||    
T  25415210 cgaaaaatatatttaag 25415226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 26953367 - 26953483
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| ||| ||||||||||||| | | |||||||||||| |  ||||||||||||||    
T  26953367 taattaggaccaaaagtcaaatgattaatatttgcaagagcagattggaagaattagtaacttcaggaatgaaaattcaaatggtttatatttgcaggga 26953466  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| | |||||||||    
T  26953467 cgaaatatatatttaag 26953483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 6334822 - 6334658
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    |||||||| |||||||||||||||||||| ||||| |         |||| |||| | |||||| |||||||||||||||||||| ||||||| | ||||    
T  6334822 cacatgggtaccacgtcgctaatgacagctcacctaagtaaaaaaacctacttagtatcaaaagccaaatgattaatatttgcagtggcagatcggaagg 6334723  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| ||  |||||||||||||| | ||||||||||||||| |||| || ||||||||    
T  6334722 attagtaactttaacaacgaaaattcaaatggtctatatttgcagggatgaaagacttatttaag 6334658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 52454921 - 52454758
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    ||||||||||||||||| ||||||||| |||||||||||       |||| ||| ||||| ||||||||| |||||||||||||| ||||||||| || |    
T  52454921 cacatgggcaccacgtcactaatgacaacccacctcaacaaaaaaacctacttatgaccagaagtcaaat-attaatatttgcagtggcagattggaatg 52454823  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||  |||||||| ||||||||| ||||||  |||||||||||| || ||||| || ||||||||    
T  52454822 attgataacttcatggacgaaaagtcaaatgacctatatttgcatgggcgaaagacttatttaag 52454758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 49989913 - 49989839
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||    
T  49989913 taattaggaccaaaagtcaaatgattaatatttgcagaggcagattgaaaggattaataacttcaagaacgaaaa 49989839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 33030436 - 33030336
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||| |||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||  ||||||||||||||||| ||| || |||||||    
T  33030436 tcaaatgattcatatttgcagtggcagattggaagaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaa 33030337  T
Q  168 g 168  Q
    |    
T  33030336 g 33030336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 29042873 - 29042759
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||   |||||||| |||||| |||||||||| | ||||    
T  29042873 taattatgaccaaaaatcaaatgattaatatttgcagggacagattggaaggattaataacttccgcgacgaaaaatcaaatggcctatatttac-ggga 29042775  T
Q  152 cgaaacacatatttaa 167  Q
    ||||| ||||||||||    
T  29042774 cgaaagacatatttaa 29042759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 35312145 - 35311977
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn--cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattg 98  Q
    |||||||||||||||| ||||||||||||| ||||||||| |         ||||||||||||  ||||||||||||||||  ||||||  | |||||||    
T  35312145 tgccacatgggcaccatgtcgctaatgacaacccacctcagcaaaaaaaaacctaattaggactgaaagtcaaatgattaaattttgcaatgacagattg 35312046  T
Q  99 aaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
     || ||||||||||||||  |||||||||||||||  |||||||||  |||||||||| || |||||||    
T  35312045 gaatgattagtaacttcagtgacgaaaattcaaatgacctatatttatagggacgaaagacctatttaa 35311977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 8890491 - 8890597
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| | || |||| || ||||||| |||||| ||||||| ||||||||  ||||||||||||||||||||| || |||||||    
T  8890491 tcaaatgattaatatttgcagtgacatattggaatgattagtcacttcatggacgaatattcaaatgacctatatttgcagggacgaaagacctatttaa 8890590  T
Q  168 gtctttt 174  Q
    | |||||    
T  8890591 gcctttt 8890597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 52563769 - 52563656
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||| |||| |||||||||||||||| |||| | ||  |||||||||||| ||||||| |||| | |||||| ||||||||||||||||    
T  52563769 taattaggaccaaaactcaagtgattaatatttgcagtggcaaaatgggaggattagtaacctcaaggatgaaattccaaataccctatatttgcaggga 52563670  T
Q  152 cgaaacacatattt 165  Q
     ||||  |||||||    
T  52563669 tgaaatgcatattt 52563656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 30830300 - 30830167
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||||||||||||||||||||||||||||||||||| || |        || |||||||| ||||| ||||||||||||  ||||| | |||||||||     
T  30830300 tgccacatgggcaccacgtcgctaatgacagcccaccccagcaaaaaaaacccaattaggatcaaaattcaaatgattaaattttgcggtggcagattgg 30830201  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaat 133  Q
    || ||||| |||||||| ||||||||||||||||    
T  30830200 aatgattattaacttcagggacgaaaattcaaat 30830167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 48380783 - 48380683
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||| ||||||  ||||||||| |||||||||||||||||  |||||||||||||||  ||||||||| || |||||||| || |||||||    
T  48380783 tcaaatgattaatttttgcactggcagattggaaggattagtaacttcagcgacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaa 48380684  T
Q  168 g 168  Q
    |    
T  48380683 g 48380683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 37152541 - 37152470
Alignment:
Q  62 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    ||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||    
T  37152541 caaaagtcaaatgattagtatttgcaagggcatattggaaggattagtaacttcatggacgaaaattcaaat 37152470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 24701551 - 24701656
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||| |||||||||| |  |||| | || ||||||||||||||||| |||||||||||||||| || |||||||||||||| |||| || |||||||    
T  24701551 tcaaatggttaatatttgtaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaa 24701650  T
Q  168 gtcttt 173  Q
    | ||||    
T  24701651 gccttt 24701656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 34176092 - 34175959
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||||||||||||||||||||||||||||| |||||||| |         ||||||| ||||||||||||||||||||| |||| |||  | | | ||     
T  34176092 tgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaaaactaattatgaccaaaagtcaaatgattaacattttcagtagtaaaatgg 34175993  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||||||| ||||||||| |||||||||||||||    
T  34175992 aaggattaataacttcaatgacgaaaattcaaat 34175959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 46545013 - 46545096
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||| |||| | || ||||||||||||||||| |||||||| |||||||  ||||||||| ||||||    
T  46545013 tcaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcagggacgaaacttcaaatgacctatatttacaggga 46545096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 28533895 - 28533774
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaa-tagcctatatttgcaggg 150  Q
    ||||||||||||||||||||||||||| || ||||||||   | |||  ||||||||||| |  | |||||||||||||||  ||||  |||||||||||    
T  28533895 taattaggaccaaaagtcaaatgattagtaattgcagggaaggtttgggaggattagtaagtatagggacgaaaattcaaacgagcc-ctatttgcaggg 28533797  T
Q  151 acgaaacacatatttaagtcttt 173  Q
    |||||||||||||||||| ||||    
T  28533796 acgaaacacatatttaagccttt 28533774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 35312258 - 35312364
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  | || | || |||||||||||||| ||||||||||||||||||||   ||||||| |||| |||||| || |||||||    
T  35312258 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaactccaaggacgaaaattcaaataagatatatttacaggaacgaaagacttatttaa 35312357  T
Q  168 gtctttt 174  Q
    | |||||    
T  35312358 gcctttt 35312364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46544900 - 46544823
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgatta 78  Q
    |||||||||||||||| ||||||||||||||||||||||| |       ||||||||||| |||||||||||||||||    
T  46544900 tgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaacctaattaggatcaaaagtcaaatgatta 46544823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 52455037 - 52455121
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    |||||||||||||| |||||| ||||||||| |||||||| |||||| | ||||||||||| ||||| | |||||||||| ||||    
T  52455037 tcaaatgattaatagttgcagtggcagattggaaggattaataactttatggacgaaaatttaaataacttatatttgcatggac 52455121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 6056500 - 6056565
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  6056500 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaag 6056565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 46364835 - 46364770
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  46364835 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 46364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 36381453 - 36381517
Alignment:
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||| ||||||||  ||| ||||||||||||||||||||||||| |||| ||||||||    
T  36381453 aggattagtaagttcaaggataaaatttcaaatagcctatatttgcagggatgaaatacatattt 36381517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 10019655 - 10019729
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatat 142  Q
    ||||||||||||||||||||  |||| | || ||||||||||||||||| ||| ||||||||||||  |||||||    
T  10019655 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattcaaatgacctatat 10019729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 33347673 - 33347611
Alignment:
Q  106 tagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  33347673 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 33347611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 2953724 - 2953659
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||  | |||||||| ||||| |||| || ||||||||    
T  2953724 gattagtaacttcaaggacgaaaattcaaatgacttatatttgtagggatgaaagacctatttaag 2953659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 5183766 - 5183701
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||| |||| || ||||||||    
T  5183766 gattagtaacttcatggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 5183701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 10019633 - 10019568
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||| ||||||| ||||||||||||||||  | ||||||||||||||||||| || ||||||||    
T  10019633 gattagcaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaatacctatttaag 10019568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 12577272 - 12577219
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| ||||    
T  12577272 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 12577219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 19755665 - 19755600
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||| |||| || ||||||||    
T  19755665 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 19755600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 24701530 - 24701477
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||| |||||||| ||||||||||||||||  |||||||||||||||||||||    
T  24701530 gattaataacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 24701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 30830391 - 30830326
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| | ||||||||||||||||  | ||||||||||||||||||| || ||||||||    
T  30830391 gattagtaactttagggacgaaaattcaaatgacttatatttgcagggacgaaagacttatttaag 30830326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 34176176 - 34176119
Alignment:
Q  110 aacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| || |||||||    
T  34176176 aacttcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 34176119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 37152798 - 37152733
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||  | |||||||||| ||| |||| || ||||||||    
T  37152798 gattagtaacttcaaggacgaaaattcaaatgacttatatttgcatggatgaaagacctatttaag 37152733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 46544991 - 46544938
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||| | ||||||||||||||||| | |||||||||||||||||||    
T  46544991 gattagtaactttatggacgaaaattcaaataacatatatttgcagggacgaaa 46544938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 49003135 - 49003070
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||| ||||||||||  |||||||||||||||| |||| || ||||||||    
T  49003135 gattagtaacttcagggacggaaattcaaatgacctatatttgcagggatgaaagacttatttaag 49003070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 8890468 - 8890404
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||| ||||||||||||||||  |||||||||| ||||| |||| || ||||||||    
T  8890468 attagtaacttcatggacgaaaattcaaatgacctatatttgaagggaagaaatacctatttaag 8890404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 26953361 - 26953297
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||||| |||| || |||||||    
T  26953361 gattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 26953297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 29980897 - 29980833
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| | ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  29980897 attagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 29980833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 32238768 - 32238704
Alignment:
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||| |||| ||| |||| ||||||||||||||||||||||||| ||||  |||||||    
T  32238768 aggattagtaagttcagggatgaaatttcaaatagcctatatttgcagggatgaaatgcatattt 32238704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 34176206 - 34176310
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||| |||||||||||| | | |||||| ||| |||||||||||| | ||| ||||||||||||  |||||||||  | ||||||||  | |||||||    
T  34176206 tcaaataattaatatttgcggtgacagattaaaaagattagtaactttagggatgaaaattcaaattacctatatttatatggacgaaagccctatttaa 34176305  T
Q  168 gtctt 172  Q
    |||||    
T  34176306 gtctt 34176310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 35312236 - 35312172
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||  ||| ||||||||||| | |||||||||||||||||||| || |||||||    
T  35312236 gattagtaacttcatcgacaaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 35312172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 33030458 - 33030525
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    ||||||||||||||   ||||||||||||||   |||||||||||||||||||| || ||||||||||    
T  33030458 gattagtaacttcagaaacgaaaattcaaatgatctatatttgcagggacgaaaaacctatttaagtc 33030525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 51933887 - 51933828
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaa 111  Q
    |||||| ||||||||| |||||||||||||||| ||| |||||||| |||| ||||||||    
T  51933887 taattatgaccaaaagacaaatgattaatatttacagtggcagattaaaagaattagtaa 51933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 30830397 - 30830494
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||| |  ||||||||||||||||||||  |||| | || || ||||||||||||   ||||||||||||||||  | |||||||||| |||    
T  30830397 taattaggaccatatttcaaatgattaatatttgcaatggcaaaatggaatgattagtaactt---ggacgaaaattcaaatgacttatatttgcaagga 30830493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 46544827 - 46544757
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||   |||||| || |||||||| ||||    
T  46544827 gattagtaacttcaaagacgaaaattcaaatgacctatatttgcaataacgaaagacttatttaagccttt 46544757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 1040422 - 1040475
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||| ||||    
T  1040422 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaa 1040475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 1047328 - 1047381
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||| ||||    
T  1047328 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaa 1047381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 2828311 - 2828190
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| ||| |||| ||||||||||||||||||||| |||| | |  |||||||||||| || | ||| ||||| ||||||   ||||| ||||| |||    
T  2828311 taattaagacgaaaattcaaatgattaatatttgcagaggcaaaatagaaggattagtaagtttatggatgaaaaatcaaatgatctataattgcaagga 2828212  T
Q  152 cgaaacacatatttaagtcttt 173  Q
     ||||  |||||||||| ||||    
T  2828211 tgaaatgcatatttaagccttt 2828190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 6345619 - 6345700
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||||||||| |||  | ||||| |||||||||||||||||| | || |||||||||||| |||| ||| |||| |||||||    
T  6345619 taattaggactaaattttaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaat 6345700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 25415104 - 25415039
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||  |||||||||||||||  |||||||||||| ||| |||| || ||||||||    
T  25415104 gattagtaacttcagagacgaaaattcaaatgacctatatttgcatggatgaaagacctatttaag 25415039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 29042879 - 29042944
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||| ||||||||||||  |||||||||||| ||| |||| || ||||||||    
T  29042879 gattagtaacttcagggatgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaag 29042944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 46849918 - 46849853
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  | |||||||||| ||| |||| || ||||||||    
T  46849918 gattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggatgaaagacctatttaag 46849853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 52455015 - 52454950
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| | ||| ||||||||||||  ||||| ||||||||||||||| || ||||||||    
T  52455015 gattagtaactttagggatgaaaattcaaatgacctatttttgcagggacgaaatacctatttaag 52454950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 2829523 - 2829603
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaata 134  Q
    |||| ||| |||| |||||||||||||||||||||||| | | ||  |||||||||||  ||||||| ||||| |||||||    
T  2829523 attatgacgaaaattcaaatgattaatatttgcaggggtaaaatgggaggattagtaagctcaaggatgaaaaatcaaata 2829603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 36380232 - 36380180
Alignment:
Q  122 gaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    |||| ||||||| ||||||||||||||||| ||||  ||||||||||||||||    
T  36380232 gaaatttcaaattgcctatatttgcagggatgaaatgcatatttaagtctttt 36380180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 46282173 - 46282073
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||   |||||| || |||||| |||| ||||||||||    
T  46282173 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaaacatatttaa 46282074  T
Q  168 g 168  Q
    |    
T  46282073 g 46282073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 52564933 - 52565032
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||| |||| ||||||||||||| || |||| | || ||| ||||||||  | | ||| |||| ||||||   ||||||||||||||||    
T  52564933 taattaggaccaaaactcaagtgattaatatttgtagtggcaaaatggaagaattagtaatcttagggaagaaatttcaaacgccctatatttgcaggga 52565032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 739343 - 739407
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| | ||||||||||||||  |||||| ||||||||| |||| || ||||||||    
T  739343 gattagtaacttcaggaacgaaaattcaaatgacctata-ttgcagggatgaaagacctatttaag 739407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 6344373 - 6344292
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||||| |||||||  ||||||| |||||||||||| ||||| | ||  ||||||||||| |||| ||| |||| |||||||    
T  6344373 taattatgaccaaatttcaaatgtttaatatttgcaagggcaaaatgggaggattagtaagttcatggatgaaatttcaaat 6344292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 46282791 - 46282888
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||    
T  46282791 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 46282888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 32519370 - 32519542
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32519370 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 32519469  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    |||||||||||||||| | ||||||||||||||  | ||||||||||||||||||| ||||||||||| ||||    
T  32519470 aggattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaaagacatatttaagccttt 32519542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 16367132 - 16366959
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16367132 tgccacatgtgcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgga 16367033  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    |||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||| ||||||||||| |||||    
T  16367032 aggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcctttt 16366959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 1150152 - 1150325
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||  || ||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1150152 tgccacatgggcaccacgtcgctaatggaagtccacctcaacaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 1150251  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    ||||||||||| |||| ||||||||||||||||  |||||||||||||| |||||| ||||||||||| |||||    
T  1150252 aggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagcctttt 1150325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 22731798 - 22731914
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  22731798 taataaggaccaaaagtcaaatgattaatatttgcagggacagattgaaaggaatagtaacttcacggacgaaaattcaaatggcctatatttgcaggga 22731897  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  22731898 cgaaagacatatttaag 22731914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 20911248 - 20911126
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  20911248 taattatgaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 20911149  T
Q  152 cgaaacacatatttaagtctttt 174  Q
    ||||| || |||||||| |||||    
T  20911148 cgaaagacctatttaagcctttt 20911126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 16367229 - 16367338
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  16367229 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcaggga 16367328  T
Q  152 cgaaacacat 161  Q
    ||||| ||||    
T  16367329 cgaaagacat 16367338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 1150055 - 1149939
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  1150055 taattaggaccaaaagtcaaatgattaatatttgcaggggccgattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 1149956  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  1149955 cgaaatacctatttaag 1149939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22309600 - 22309427
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||| | ||||||||||||||||||||||| |       ||||| || |||||||||||||||||||||||| ||||| ||||||||| |    
T  22309600 tgccacatgggcacgatgtcgctaatgacagcccacctcagcaaaaaaacctaaatatgaccaaaagtcaaatgattaatatgtgcagtggcagattgga 22309501  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    ||||||||||||||||  ||| |||||||||||  ||||||||||||||||||||| || |||||||| |||||    
T  22309500 aggattagtaacttcattgactaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcctttt 22309427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 20911345 - 20911511
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||| |        ||||||| |||||||||||||||||||||||||||||||  ||||||| |    
T  20911345 tgccacatgggcaccacgtcgctaatgacagcccatctcagcaaaaaaatctaattatgaccaaaagtcaaatgattaatatttgcagga-cagattgga 20911443  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    | |||||||||||||| |||| |||||||||||  ||||||||| ||||||||||| |||||||||||    
T  20911444 atgattagtaacttcagggacaaaaattcaaatgacctatatttacagggacgaaagacatatttaag 20911511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 45663774 - 45663890
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||||||||||||| | |||||||| ||||||    
T  45663774 taattaggaccaaaagtcaaatgattaatatttgcagggccagatttgaaggattagtaacttcagggacgaaaattcaaattgactatatttacaggga 45663873  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  45663874 cgaaagacatatttaag 45663890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9693911 - 9693768
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||  ||||||| ||||||||| |    
T  9693911 tgccacataggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaaactttgcagtggcagattgga 9693812  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatattt 144  Q
    ||||||||||||||||  |||||||||| |||| ||||||||||    
T  9693811 aggattagtaacttcagtgacgaaaattaaaatggcctatattt 9693768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 10446932 - 10446834
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  10446932 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 10446834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 19607087 - 19606920
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncct-aattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||| |||||||||||||||||||||||||||||||||  |        || |||||||||||||||||||||||||||||||||||  | |||||||     
T  19607087 tgccatatgggcaccacgtcgctaatgacagcccacctcggcaaaaaaaacttaattaggaccaaaagtcaaatgattaatatttgcaacgacagattgg 19606988  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||| ||||||||||| ||||||||||    
T  19606987 aaggattagtaacttcagggacgaaaattcaaatgacatatatttacagggacgaaagacatatttaa 19606920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 17580543 - 17580713
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |       ||||||||||||||||||||||    ||||||||||||| |||| |||| |    
T  17580543 tgccacatgggcaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaa----ttaatatttgcagtggcatattgga 17580638  T
Q  101 aggattagtaacttcaaggacg-aaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    |||||||||||||| | ||||| |||||||||||  |||||||||| |||||||||| ||||||||||| |||||    
T  17580639 aggattagtaactttagggacgaaaaattcaaatgacctatatttgtagggacgaaagacatatttaagcctttt 17580713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 18477074 - 18476921
Alignment:
Q  3 ccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaag 102  Q
    |||||||||||||| |||| |||||||||||||||||| |       ||||||||||| ||||||||||||||||||  ||||||| ||||||||| |||    
T  18477074 ccacatgggcaccatgtcgttaatgacagcccacctcagcaaaaaaacctaattaggatcaaaagtcaaatgattaaattttgcagtggcagattggaag 18476975  T
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| |||| |||||||||||  |||||| ||||||||||||||    
T  18476974 gattagtaacttcagggacaaaaattcaaatgacctatagttgcagggacgaaa 18476921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 32519273 - 32519157
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||| |||| ||||||||||||||||  ||||||||||||||||    
T  32519273 taattagaaccaaaagtcaaatgattaatatttgcaggagcatattggaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggga 32519174  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  32519173 cgaaagacatatttaag 32519157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 8089570 - 8089455
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||  | ||||||||||| ||    
T  8089570 taattaggaccaaaagtcaaatgattgatatttgcaggggcagattggaaggattagtaacttcaaagacgaaaattcaaatgacatatatttgcagaga 8089471  T
Q  152 cgaaacacatatttaa 167  Q
    ||||| || |||||||    
T  8089470 cgaaaaacctatttaa 8089455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 41846561 - 41846406
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||| |||| | |||       |||||||| ||  |||||||||||||||||||||||||| ||||||||  |    
T  41846561 tgccacatgggcaccacgtcgctaatgacagtccactttaacaaaaaaacctaattatgattaaaagtcaaatgattaatatttgcagtggcagattaga 41846462  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||| |||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  41846461 aggattactaacttcagggacgaaaattcaaatgacctatatttgtagggacgaaa 41846406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 4664600 - 4664522
Alignment:
Q  171 ttttgcttatttgtgattcaccaatcaatgaattcacaatttcataaaactcaattcttctccttctctattcatctca 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4664600 ttttgcttatttgtgattcaccaatcaatgaattcacaatttcataaaactcaattcttctccttctctattcttctca 4664522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 8089667 - 8089831
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    |||||||||| |||||||||||||||||||| |||||||| |        ||||||||||||||||||||||||||||||||||||   ||||||||||     
T  8089667 tgccacatggacaccacgtcgctaatgacagtccacctcagcaaaaaaaacctaattaggaccaaaagtcaaatgattaatatttg---gggcagattgg 8089763  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||| |||| ||||| |||||  ||||||||| || | |||||| ||||||||||    
T  8089764 aaggattagtaacttcagggacaaaaatgcaaatgacctatatttacaagaacgaaagacatatttaa 8089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 17366843 - 17366964
Alignment:
Q  7 atgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggatt 106  Q
    |||||||||||||||||||||||| ||||||||| |       |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  17366843 atgggcaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaattgattaatatttgcagtggcagattggaaggatt 17366942  T
Q  107 agtaacttcaaggacgaaaatt 128  Q
    |||||||| | |||||||||||    
T  17366943 agtaactttagggacgaaaatt 17366964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 17580446 - 17580330
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||||  |||||||||||||||||| |||||||| ||| ||    
T  17580446 taattaggatcaaaagtcaaatgattaatatttgcaggggcaaattggaaggattaataacttcggggacgaaaattcaaatagtctatatttacagaga 17580347  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  17580346 cgaaagacctatttaag 17580330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 4375815 - 4375933
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||  | |||||||||| |    
T  4375815 cctaattaggaccaaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcatggacgaaaatttaaatgacatatatttgcatg 4375914  T
Q  150 gacgaaacacatatttaag 168  Q
    ||||||| || ||||||||    
T  4375915 gacgaaagacctatttaag 4375933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28599642 - 28599809
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||| |        |||||||||||||||||||||||||||||  ||||||  ||||||||| |    
T  28599642 tgccacatgggcaccacgtcgctcatgacagcccatctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaaattttgcaatggcagattgga 28599741  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||| |||||||||  |||||||||||||||  | ||||||| |||||| |||| || ||||||||    
T  28599742 aggatttgtaacttcagagacgaaaattcaaatgacttatatttacagggatgaaagacctatttaag 28599809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 37984942 - 37985106
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||| ||||||| |||||||||||||||||||| |       |||||||| || ||||||||||||||||||  ||||||| |||| |||| |    
T  37984942 tgccacatgggtaccacgttgctaatgacagcccacctcagcaaaaaaacctaattaagatcaaaagtcaaatgattaaattttgcagtggcaaattgga 37985041  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||| ||||  |||||||| ||||||  | ||||||||||||||||||| || |||||    
T  37985042 aggattagtaatttcagagacgaaaaatcaaatgacatatatttgcagggacgaaatacttattt 37985106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 43682026 - 43681853
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-ctaattaggaccaaaa-gtcaaatgattaatatttgcaggggcagattg 98  Q
    |||||||||| || |||||||||||||||| |||||||||||       | ||||||| |||||||| |||||||||||||||||||||  |||| | ||    
T  43682026 tgccacatgg-catcacgtcgctaatgacaacccacctcaacaaaaaaactctaattatgaccaaaaagtcaaatgattaatatttgcaatggcaaaatg 43681928  T
Q  99 aaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
     || |||||||||||| | ||||||||||||||||  | ||||||||||||||||||| ||||||||||| ||||    
T  43681927 gaatgattagtaactttatggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagccttt 43681853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 9958990 - 9958839
Alignment:
Q  5 acatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    |||||||||||||||||||||||||||||||||||| |         |||||||| |||||||||||| |||||||||||||||| ||| ||||| |||     
T  9958990 acatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaactaattag-accaaaagtcaactgattaatatttgcagtggctgattggaagc 9958892  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||| |||||||  |||||||||||||||   ||||||||||||||||||||    
T  9958891 attagcaacttcattgacgaaaattcaaatgatctatatttgcagggacgaaa 9958839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 9959107 - 9959206
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| |||| |||||||||||  || |||||||||||||||||| || |||||||    
T  9959107 tcaaatgattaatatttgtagtggcagattgaaaggattagtaacttcatggaccaaaattcaaatgaccaatatttgcagggacgaaagacttatttaa 9959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 17284950 - 17285105
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||| |        |||||||||||||||||| ||||||||||  ||||  | | || |||| |    
T  17284950 tgccacatgtgcaccacgtcgctaatgacagcccacctcagccaaaaaatctaattaggaccaaaagttaaatgattaaattttgttgtgacatattgga 17285049  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||  |||||||||||||||  |||| |||| |||||||||||    
T  17285050 aggattagtaacttcattgacgaaaattcaaatgacctaaattttcagggacgaaa 17285105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 22309713 - 22309813
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| | ||||||| ||  ||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || |||||||    
T  22309713 tcaaatgattaatatttgcagtgtcagattggaacaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaa 22309812  T
Q  168 g 168  Q
    |    
T  22309813 g 22309813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 9694024 - 9694124
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  | || | || ||||||||||||||||| ||||||||||||||||  |||||||||||| |||||||| || |||||||    
T  9694024 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacctatttaa 9694123  T
Q  168 g 168  Q
    |    
T  9694124 g 9694124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 41846674 - 41846750
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatattt 144  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  41846674 tcaaatgattaatatttgcagtggcagattggaaggagtagtaacttcaggaacgaaaattcaaatggcctatattt 41846750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 28599529 - 28599430
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  |||| | || ||||||||||||||||| ||||||||||||||||   ||||||||||| |||||||| || |||||||    
T  28599529 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaagacctatttaa 28599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 17366726 - 17366628
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| |||| ||| ||||||||||||  |||||||||||| ||| |||| || ||||||||    
T  17366726 aaatgattaatatttgcagtggcagattggaaggattattaaattcagggaagaaaattcaaatgacctatatttgcatggatgaaagacctatttaag 17366628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 19620777 - 19620879
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    |||||||  |||| |||||||||||||||||||||||||| | || |||||||||||| |||| ||| |||| |||||||  |||||||||| |||||||    
T  19620777 attaggatgaaaattcaaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacctatatttgtagggacg 19620876  T
Q  154 aaa 156  Q
    |||    
T  19620877 aaa 19620879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 45663768 - 45663703
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  45663768 gattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 45663703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 43236619 - 43236523
Alignment:
Q  55 ttaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||| |||||||||||||||||||||||   | |||  ||||||||||| |||| ||| |||| ||||||| |||||||||||||||||    
T  43236619 ttaggaccaaaactcaaatgattaatatttgcagggaaggtttgggaggattagtaagttcagggatgaaatttcaaatggcctatatttgcaggga 43236523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 17366750 - 17366815
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| |||||||| |||||||||||    
T  17366750 gattagtaacttcagggacgaaaattcaaatggactatatttgcaaggacgaaagacatatttaag 17366815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 18477160 - 18477257
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||| | ||  |||| | || || |||||||||||||| ||||||||||| |||| || ||||||||||||||||||| ||||||||||    
T  18477160 aaatgattaatatcttcaatggcaaaatggaatgattagtaacttcatggacgaaaatttaaatggcttatatttgcagggacgaaatacatatttaa 18477257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 41846652 - 41846587
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  41846652 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacttatttaag 41846587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 43682117 - 43682052
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||| ||||||| |||||||||||    
T  43682117 gattagtaacttcagggacgaaaattcaaataacctaaatttgcagagacgaaagacatatttaag 43682052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 4375673 - 4375737
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||| |||||||||||||||| || ||||||||||| ||||||| ||||||||||    
T  4375673 gattagtaacttcagggacgaaaattcaaattgcatatatttgcagagacgaaagacatatttaa 4375737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 24608030 - 24607951
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    ||||||||||||| ||||||||||||||||||  | ||  | ||||||||||||||||||||| ||| ||||||||||||    
T  24608030 attaggaccaaaattcaaatgattaatatttgtggtggatgtttgaaaggattagtaacttcagggaagaaaattcaaat 24607951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 43237705 - 43237815
Alignment:
Q  55 ttaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacga 154  Q
    |||||||||||| |||| ||||||||||||||||||   | |||  ||||||||||| |||| |||  ||| ||||||| |||||||||||||||||| |    
T  43237705 ttaggaccaaaactcaagtgattaatatttgcagggaaggtttgggaggattagtaagttcagggataaaatttcaaatggcctatatttgcagggacaa 43237804  T
Q  155 aacacatattt 165  Q
    ||  |||||||    
T  43237805 aatgcatattt 43237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 8089576 - 8089641
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||| |||| || ||||||||    
T  8089576 gattagtaacttcaaggacgaaaattcaaacgacctatatttgcagggatgaaagacctatttaag 8089641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 32519279 - 32519344
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  32519279 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 32519344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 17284813 - 17284745
Alignment:
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||   ||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  17284813 aaggattagtaacttcagatacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaag 17284745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 23206409 - 23206485
Alignment:
Q  71 aatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgca 147  Q
    |||| ||||||||||||| |||| | ||| |||||||||||||||||||| |||| |||||||  ||||||||||||    
T  23206409 aatgcttaatatttgcagtggcaaaatgagaggattagtaacttcaaggatgaaatttcaaatgccctatatttgca 23206485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 23678013 - 23678089
Alignment:
Q  71 aatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgca 147  Q
    |||| ||||||||||||| |||| | ||| |||||||||||||||||||| |||| |||||||  ||||||||||||    
T  23678013 aatgcttaatatttgcagtggcaaaatgagaggattagtaacttcaaggatgaaatttcaaatgccctatatttgca 23678089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 5608712 - 5608637
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaa 125  Q
    |||||||| || ||||||||||||||||||  ||||||| | || |||| ||||||||||||||||| ||||||||    
T  5608712 cctaattaagatcaaaagtcaaatgattaaattttgcagtgccaaattggaaggattagtaacttcagggacgaaa 5608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 9694002 - 9693935
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||||||| | ||||||||||||||||  |||||||||||||||||||||  | ||||||||||    
T  9694002 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaaatcctatttaagtc 9693935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 1150061 - 1150126
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||| |||| || ||||||||    
T  1150061 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 1150126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 16367223 - 16367158
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||| |||| || ||||||||    
T  16367223 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 16367158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 22731792 - 22731727
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| | ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  22731792 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 22731727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 5608876 - 5608964
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||||  |||| | |||||||||||||||||| |  || ||||||||||||   |||||||||| || ||||||    
T  5608876 tcaaatgattaatatttgcaatggcaaaatgaaaggattagtaactttagagaggaaaattcaaatgatctatatttgctggaacgaaa 5608964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 20911254 - 20911302
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  20911254 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 20911302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 28599552 - 28599616
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||| |||| |||||||||||||||| | |||||||||||||| ||||| || ||||||||    
T  28599552 attagtaatttcagggacgaaaattcaaatggtctatatttgcaggggcgaaagacctatttaag 28599616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 29958545 - 29958645
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || ||  ||||||| | || |||||||||||| |||| ||| ||||| ||||| |||||||| || |||||| |||| ||||||||||    
T  29958545 tcaaatgattagtaattataggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacagcctataattacagggatgaaaaacatatttaa 29958644  T
Q  168 g 168  Q
    |    
T  29958645 g 29958645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 11830224 - 11830307
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||||||| |||||||| |||||| |||| |||| | |  ||||||||| |||||||||||||| || ||| ||||||||||||    
T  11830224 cctaattatgaccaaaaatcaaataattagtattcgtaatggcagattggaaggattagtaactccatggatgaaaattcaaat 11830307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 13646198 - 13646119
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaa 131  Q
    ||||||||||||||  | || ||||||||||||||||||||| ||||  ||||||||||| | || |||| |||||||||    
T  13646198 taattaggaccaaattttaagtgattaatatttgcaggggcaaattgggaggattagtaagtacagggactaaaattcaa 13646119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 13652075 - 13652154
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaa 131  Q
    ||||||||||||||  | || ||||||||||||||||||||| ||||  ||||||||||| | || |||| |||||||||    
T  13652075 taattaggaccaaattttaagtgattaatatttgcaggggcaaattgggaggattagtaagtacagggactaaaattcaa 13652154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 20982626 - 20982520
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  20982626 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 20982527  T
Q  168 gtctttt 174  Q
    | |||||    
T  20982526 gcctttt 20982520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 9959085 - 9959032
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||| ||  |||||||||||  |||||||||||||||||||||    
T  9959085 gattagtaacttcaaagataaaaattcaaatgacctatatttgcagggacgaaa 9959032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 22309691 - 22309642
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    |||||||||||| | ||||||||||||||||  |||||||||||||||||    
T  22309691 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggac 22309642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 29957919 - 29957814
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  29957919 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 29957820  T
Q  168 gtcttt 173  Q
    | ||||    
T  29957819 gccttt 29957814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 7981162 - 7981066
Alignment:
Q  55 ttaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||| |||| ||||||||||||||||||   | |||  ||||||||||| |||  ||| |||| |||||||  |||||| |||||||||    
T  7981162 ttaggaccaaaactcaagtgattaatatttgcagggaaggtttgggaggattagtaagttcggggatgaaatttcaaatgacctatagttgcaggga 7981066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 17580452 - 17580516
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||| ||||||||||||||||   ||||||||||| ||| |||| || |||||||    
T  17580452 gattagtaacttcagggacgaaaattcaaatgatctatatttgcaaggatgaaagacctatttaa 17580516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 20101872 - 20101772
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || ||||||||||| | ||  |||||||||||  ||| ||| ||||| |||||| ||||||| || |||||| ||||  |||||||||    
T  20101872 tcaaatgattattaattgcaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaa 20101773  T
Q  168 g 168  Q
    |    
T  20101772 g 20101772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 19607169 - 19607131
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggg 90  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  19607169 taattagaaccaaaagtcaaattattaatatttgcaggg 19607131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 5608854 - 5608789
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||   ||||||||| ||||  | ||||||||||||||||||| || ||||||||    
T  5608854 gattagtaacttcataaacgaaaattaaaatgacttatatttgcagggacgaaagacctatttaag 5608789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 17284859 - 17284912
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| | |  |||||||||||  |||||||||||||||||||||    
T  17284859 gattagtaacttcaggaatcaaaattcaaattacctatatttgcagggacgaaa 17284912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 33881693 - 33881580
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||| | || |||||||||||||||| |||| | ||  || |||| |||| | | ||| |||| |||||||  ||||||||| ||||||    
T  33881693 taattaggaccaaaactgaagtgattaatatttgcagtggcaaaatgggagaattaataaccttagggatgaaatttcaaatgccctatatttacaggga 33881594  T
Q  152 cgaaacacatattt 165  Q
     ||||  |||||||    
T  33881593 tgaaatgcatattt 33881580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 20983259 - 20983359
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  | ||||| || |||||| ||||  |||||||||    
T  20983259 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggtctataattacagggatgaaaagcatatttaa 20983358  T
Q  168 g 168  Q
    |    
T  20983359 g 20983359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 7e-61; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 1741556 - 1741389
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  1741556 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaagggcagattgga 1741457  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  1741456 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 1741389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 51279400 - 51279228
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||  |       |||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  51279400 tgccacatgggcaccacgtcgctaatgacagtccacctcggcaaaaaaacctaattaggactaaaagtcaaatgattaatatttgcaggggcaaattgaa 51279301  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    | |||||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||    
T  51279300 atgattagtaacttctgggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagccttt 51279228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10998088 - 10998255
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |         |||||| |||||||||||||||||||||||||||||||||||||||| |    
T  10998088 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatttaattatgaccaaaagtcaaatgattaatatttgcaggggcagattgga 10998187  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||| ||||||| |||||||||||    
T  10998188 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagagacgaaaaacatatttaag 10998255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 55036884 - 55037050
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||| || |||||| |        |||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  55036884 tgccacatgggcaccacgtcgctaatgacaaccgacctcagcaaaaaaatctaattaggaccaaaaatcaaatgattaatatttgcaggggcagattgga 55036983  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  55036984 aggattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 55037050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 40257089 - 40257261
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||| |||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40257089 tgccacatgggcaccacgtcgc-aatgacagcccacctcaacaaaaatacctaattaggatcaaaagtcaaatgattaatatttgcaggggcagattgaa 40257187  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    | ||||||||| |||| ||||||||||||||||| | |||||||  |||||||||| ||||||||||| |||||    
T  40257188 atgattagtaatttcagggacgaaaattcaaataacttatatttatagggacgaaaaacatatttaagcctttt 40257261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 53037242 - 53037412
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||| ||||||| |||||||||| | |       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53037242 tgccacatgggcaccacgttgctaatggcagcccaccttagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 53037341  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtct 171  Q
    ||||| |||||||  | ||||||||||||||||  ||||||||| ||| ||||||| | ||||||||||||    
T  53037342 aggatcagtaactgtagggacgaaaattcaaatgacctatatttacagagacgaaagatatatttaagtct 53037412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 11312904 - 11312731
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||| |||||||||| ||||||||| ||||||||| |        ||||||||||||||||||||||||||||||||||||||||||||| || |    
T  11312904 tgccacatgagcaccacgtcactaatgacatcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagactgca 11312805  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    |||||| ||||||||| ||||||||||||||||  |||||||||  |||||||||| ||||||||||| |||||    
T  11312804 aggattggtaacttcagggacgaaaattcaaatgacctatatttagagggacgaaagacatatttaagcctttt 11312731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 40256992 - 40256872
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |||    
T  40256992 taattaggaccaaaagtcaaatgattaatatttgcaagggcatattggaaggattagtaacttcagggacgaaaattcaaataacctatatttgcatgga 40256893  T
Q  152 cgaaacacatatttaagtctt 172  Q
    ||||| || ||||| ||||||    
T  40256892 cgaaagacctatttgagtctt 40256872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 168
Target Start/End: Original strand, 33458137 - 33458300
Alignment:
Q  7 atgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn--cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagga 104  Q
    |||||||||| ||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||| | ||||||  |||||    
T  33458137 atgggcaccatgtcgctaatgacagcccacctcagcaaaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcagtgacagattagaagga 33458236  T
Q  105 ttagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| |||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  33458237 ttagtaacttcagggacgacaattcaaatgacctatatttgcagggacgaaagacctatttaag 33458300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 10749436 - 10749320
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  10749436 taattaggaccaaaagtcaaatgattaatatttgcagggatagattagaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaggga 10749337  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  10749336 cgaaagacctatttaag 10749320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 22129124 - 22129008
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||||||||| | ||||    
T  22129124 taattaggacgaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagtgacgaaaattcaaatagcctatatttacgggga 22129025  T
Q  152 cgaaacacatatttaag 168  Q
     |||| || ||||||||    
T  22129024 tgaaagacctatttaag 22129008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 30804069 - 30804230
Alignment:
Q  8 tgggcaccacgtcgctaatgacagcccacctc-aacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggatt 106  Q
    |||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  30804069 tgggcaccacgtcgctaatgacagcccacctccaaaaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcagtgacagattggaaggatt 30804168  T
Q  107 agtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||| | ||||||||||||||    |||||||  |||||||||| || ||||||||    
T  30804169 agtaacttcaggaacgaaaattcaaatgatatatatttaaagggacgaaatacttatttaag 30804230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 21300399 - 21300514
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||| |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||  |||||||||||||||| | ||||||||||||||    
T  21300399 taattagggccaaaagtcaaatgattaatatttacagggacagactgaaaggattagtaacttcagagacgaaaattcaaataacatatatttgcaggga 21300498  T
Q  152 cgaaacacatatttaa 167  Q
    ||||| || |||||||    
T  21300499 cgaaagacctatttaa 21300514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 55036787 - 55036672
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||  ||||||||||||||||    
T  55036787 taattaggaccaaaggttaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcaggga 55036688  T
Q  152 cgaaacacatatttaa 167  Q
    ||||| || |||||||    
T  55036687 cgaaagacctatttaa 55036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 10749663 - 10749774
Alignment:
Q  53 aattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||| || |||||||||||||| ||||||||||| ||||  |||||||||||||||||    
T  10749663 aattatgaccaaaagtcaaatgattaatatttgctgaggcagattggaaagattagtaacttcagggacgaaaatttaaatgacctatatttgcagggac 10749762  T
Q  153 gaaacacatatt 164  Q
    |||| |||||||    
T  10749763 gaaagacatatt 10749774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 46670367 - 46670250
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    |||||||||||||||||||||||||||||  ||||||| || |||||| |||||||||||| |||||||||| ||||||||||  |||||||||||||||    
T  46670367 ctaattaggaccaaaagtcaaatgattaaattttgcagtggtagattggaaggattagtaaattcaaggacggaaattcaaatgacctatatttgcaggg 46670268  T
Q  151 acgaaacacatatttaag 168  Q
    || ||| || ||||||||    
T  46670267 acaaaagacttatttaag 46670250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 30890422 - 30890588
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||          | | ||||||| |||||||||||||||||  ||||||| |||||||||||    
T  30890422 tgccacatgggcaccacgccgctaatgacagcccacctcagaaaaaaaaaccatttaggacaaaaagtcaaatgattaaattttgcagtggcagattgaa 30890521  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    | |||||||||||||| ||| ||||||||||||  ||||||||| |||  |||||| || |||||||    
T  30890522 aagattagtaacttcagggatgaaaattcaaatgacctatatttacagaaacgaaagacctatttaa 30890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 21300302 - 21300192
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||| ||||||||||||| |||||||| |       |||||||||||| |||| |||||||||||||||||||| |||||||| |||    
T  21300302 tgccacatgggcaccacatcgctaatgacagtccacctcagcaaaaaaacctaattaggacaaaaaatcaaatgattaatatttgcatgggcagatagaa 21300203  T
Q  101 aggattagtaa 111  Q
    |||||||||||    
T  21300202 aggattagtaa 21300192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 28310517 - 28310352
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |       ||||||||| ||||||||||||||||||||  ||||||| || | | || |    
T  28310517 tgccacatgggaaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattagaaccaaaagtcaaatgattaaattttgcagtggaaaactgga 28310418  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||| | ||||| ||||||||||  ||| ||||||| ||| ||||| || |||||||    
T  28310417 aggattagtaactttagggacggaaattcaaatgacct-tatttgcgggggcgaaagacctatttaa 28310352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 22129221 - 22129356
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc---ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagatt 97  Q
    |||||||||||||||| |||||||||||||| |||||||| |           ||||||||||||||||||||||| |||||||||||||| |||| |||    
T  22129221 tgccacatgggcaccatgtcgctaatgacagtccacctcagcaaaaaaaaaaactaattaggaccaaaagtcaaattattaatatttgcagaggcaaatt 22129320  T
Q  98 gaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
      ||||||||||||||||| ||||||||||||||||    
T  22129321 tgaaggattagtaacttcagggacgaaaattcaaat 22129356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 53037145 - 53037029
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||| || |||| ||||||||| ||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  53037145 taattatgatcaaatgtcaaatgactaatatttgcaggggtatattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaggga 53037046  T
Q  152 cgaaacacatatttaag 168  Q
     |||| || ||||||||    
T  53037045 tgaaagacttatttaag 53037029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 10997992 - 10997879
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||| ||||||||||||||||||||||| |||||    |||| ||||||||||||||||| ||||||||||||||||  ||| |||||||||| |    
T  10997992 taattaggatcaaaagtcaaatgattaatatttacaggga---attggaaggattagtaacttcagggacgaaaattcaaatgacctgtatttgcaggaa 10997896  T
Q  152 cgaaacacatatttaag 168  Q
    | ||| |||||||||||    
T  10997895 caaaatacatatttaag 10997879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 30654653 - 30654486
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||| ||| ||||||||| |||||||||| | ||||||| |        ||||||||||||||||||||||| |||||||||| |||  |||||||| |    
T  30654653 tgccatatgagcaccacgttgctaatgacaactcacctcagctaaaaagactaattaggaccaaaagtcaaattattaatatttacagtagcagattgga 30654554  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |  |||||||||||||||||||||| ||||||   | |||||||||||||| |||| || ||||||||    
T  30654553 aatattagtaacttcaaggacgaaatttcaaacgacttatatttgcagggatgaaagacttatttaag 30654486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 38642799 - 38642633
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||| ||||||||||||||| |||||| |       ||||||||||||||||||| ||||||||||  ||||||| || | |||| |    
T  38642799 tgccacatgggcaccacatcgctaatgacagcc-acctcagccaaaaaacctaattaggaccaaaagtgaaatgattaaattttgcagtggtatattgga 38642701  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||| ||||||||| ||||  ||||| ||||  | |||||||||| |||||||| || ||||||||    
T  38642700 aggattggtaacttcagggacagaaatttaaatgacttatatttgcatggacgaaatacctatttaag 38642633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 11313001 - 11313081
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| | |||||||||||||||    
T  11313001 taattaggaccaaaagtcaaatgattagtatttgcaggggcagattagaaggattagtaacttc-atgacgaaaattcaaat 11313081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 33989284 - 33989413
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    |||||||||||||||||||||||||||||||| || || | || |||| |||||||| |||||||| ||||||||||||||||    ||||||||||       
T  33989284 ctaattaggaccaaaagtcaaatgattaatatctgtagtgacaaattggaaggattactaacttcatggacgaaaattcaaatgatatatatttgcatct 33989383  T
Q  151 acgaaacacatatttaagtcttttgcttat 180  Q
    |||||| ||||||||||||| |||| ||||    
T  33989384 acgaaagacatatttaagtcatttgattat 33989413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 10749586 - 10749649
Alignment:
Q  53 aattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttca 116  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  10749586 aattaggaccaaaagtcaaatgattaatatttgctggggcagattggaaggattagtaacttca 10749649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 24576560 - 24576675
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||| |||||||||||| ||||| || |||||||||| |  ||  ||||| |||||    
T  24576560 ctaattaggaccaaaattcaaatgattaatatttgcactggcagattggaaggattagtaatttcaaagatgaaaattcaactgacc--tatttacaggg 24576657  T
Q  151 acgaaacacatatttaag 168  Q
    |||||| || ||||||||    
T  24576658 acgaaagacctatttaag 24576675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 35432615 - 35432720
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||||||||| |||||||| |||||| | | ||||||||||||||| | ||||||| ||||     
T  35432615 ctaattatgacaaaaagtcaaataattaatatttgcagtggcagattggaaggattaataactttatgaacgaaaattcaaataacttatatttacagga 35432714  T
Q  151 acgaaa 156  Q
    ||||||    
T  35432715 acgaaa 35432720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 30803948 - 30803845
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||| |||||||||||||||| | ||||||| ||| |||||||||||||  |||||||||||||||  |||||| ||| |||||||||| || |||||||    
T  30803948 tcaattgattaatatttgcagtgacagattggaagaattagtaacttcagagacgaaaattcaaatgacctatagttgaagggacgaaagacctatttaa 30803849  T
Q  168 gtct 171  Q
    ||||    
T  30803848 gtct 30803845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 30654762 - 30654867
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||| |||| ||||||||  |||||| ||||||||||  |||||||||||||||  ||||||||||||||||||||| || |||| ||    
T  30654762 tcaaatgattaatatt-gcagtggcagattagaaggatcagtaacttcatagacgaaaattcaaatgacctatatttgcagggacgaaagacctattaaa 30654860  T
Q  168 gtctttt 174  Q
    | |||||    
T  30654861 gcctttt 30654867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 33989116 - 33989017
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||| | | |||||||||||||  | ||||||||||| |||||||| || |||||||    
T  33989116 tcaaataattaatatttgcagtggcagattggaaggattagtaacttaaggtacgaaaattcaaaaggtctatatttgca-ggacgaaatacctatttaa 33989018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 24576392 - 24576291
Alignment:
Q  68 tcaaatgattaatattt--gcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||||| |||  ||||  |||||||  |||||||||||| |||| |||||||||||||||| || ||||||||||||||||||| || |||||    
T  24576392 tcaaatgattaatttttttgcagttgcagattagaaggattagtaatttcatggacgaaaattcaaatggcttatatttgcagggacgaaagacctattt 24576293  T
Q  166 aa 167  Q
    ||    
T  24576292 aa 24576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 24576414 - 24576479
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||| ||||||||| ||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  24576414 gatttgtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaaacttatttaag 24576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 30803970 - 30804035
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  30803970 gattagtaacttccgggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaag 30804035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 33989138 - 33989202
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  33989138 gattagtaacttca-ggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaag 33989202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 35432475 - 35432540
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| || ||||||||||||| | |||||||||||||||||||| || ||||||||    
T  35432475 gattagtaacttcatgggcgaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 35432540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 38642920 - 38642867
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38642920 gattaataacttcatggacgaaagttcaaatagcctatatttgcagggacgaaa 38642867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 55036793 - 55036858
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  55036793 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 55036858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 21255813 - 21255913
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||| ||  |||| | || ||| ||||||||||| | ||||||||||||||||   ||||||||||||| |||||| || |||||||    
T  21255813 tcaaatgattaatatttacaatggcaaaatggaagcattagtaactttatggacgaaaattcaaatgatctatatttgcaggaacgaaagacttatttaa 21255912  T
Q  168 g 168  Q
    |    
T  21255913 g 21255913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 49724 - 49651
Alignment:
Q  95 attgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||| ||| |||||||| |||| |||||||| |||||||||| ||||||||||||||| ||| || ||||||||    
T  49724 attggaagaattagtaatttcagggacgaaatttcaaatagcttatatttgcagggacaaaatacctatttaag 49651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 11312995 - 11312930
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||| ||| |||| || ||||||||    
T  11312995 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacttatttaag 11312930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 21300393 - 21300328
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||| ||||||||||||  |||||||||||||||| |||| || ||||||||    
T  21300393 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 21300328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 22129130 - 22129195
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  ||||||||| |||||| |||| || ||||||||    
T  22129130 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaag 22129195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 53037151 - 53037216
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||| ||| |||| || ||||||||    
T  53037151 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaag 53037216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 28310630 - 28310730
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  |||| | || || |||||||||||| | || |||| ||||||||  ||||||||||| || |||||| || |||||||    
T  28310630 tcaaatgattaatatttgcaatggcaaaatggaaagattagtaactttagggtcgaagattcaaatgacctatatttgctggaacgaaagacctatttaa 28310729  T
Q  168 g 168  Q
    |    
T  28310730 g 28310730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 30890331 - 30890398
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||||||||| ||||||||||||||||  | ||||||||| ||||||||| |  ||||||||||    
T  30890331 gattagtaacttcagggacgaaaattcaaatgacttatatttgctgggacgaaatatctatttaagtc 30890398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 33458018 - 33457919
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| | || ||| ||||||||||||||||||  | | |||||||||||   | |||||| || |||||||| || |||||||    
T  33458018 tcaaatgattaatatttgcagtgacatattaaaaggattagtaacttcagaggcaaaaattcaaatgatccatatttacatggacgaaagacctatttaa 33457919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 35432458 - 35432403
Alignment:
Q  118 ggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    |||||||||||||||| | |||||||||||||||||||| || |||||||| ||||    
T  35432458 ggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagccttt 35432403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 51279490 - 51279444
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||    
T  51279490 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 51279444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 10749442 - 10749495
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||||||||||| ||||  |||||||||||||||| ||||    
T  10749442 gattagtaacttcagggacgaaaatttaaatgacctatatttgcagggatgaaa 10749495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 10997998 - 10998051
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||||||||||||||||  | |||||||||||||| ||||    
T  10997998 gattagtaacttcatggacgaaaattcaaatgacatatatttgcagggatgaaa 10998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 43105832 - 43105929
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||| || || |||||||| | ||||||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| |||| || |||||    
T  43105832 tcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaaacgtattt 43105929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 48188480 - 48188383
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| |||| ||||||||    
T  48188480 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaaacatattt 48188383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 51279496 - 51279537
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggca 93  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  51279496 taattatgaccaaaagtcaaatgattaatatttacaggggca 51279537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 1757302 - 1757402
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  1757302 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaa 1757401  T
Q  168 g 168  Q
    |    
T  1757402 g 1757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 33458040 - 33458104
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||| |  |||||||||||||||  |||||||||| |||||||||| || |||||||    
T  33458040 gattagtaactttagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaa 33458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 38642942 - 38643043
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  |||| | || ||| |||| |||||    | ||||||||||||||   |||||||||||| |||||||||| |||||||    
T  38642942 tcaaatgattaatatttgcaatggcaaaatggaagaattaataact----gaacgaaaattcaaatgatctatatttgcagagacgaaacacctatttaa 38643037  T
Q  168 gtcttt 173  Q
    | ||||    
T  38643038 gccttt 38643043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 40256998 - 40257062
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||| ||||||| | ||||||||||||||  |||||||||||||||| |||| || |||||||    
T  40256998 gattagcaacttcaggaacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 40257062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 45279282 - 45279382
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  45279282 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 45279381  T
Q  168 g 168  Q
    |    
T  45279382 g 45279382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 20309512 - 20309587
Alignment:
Q  58 ggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    ||||||||| |||| ||||||||| ||||| ||  || ||||||||||| |||| |||| |||| |||||||||||    
T  20309512 ggaccaaaactcaagtgattaataattgcaaggcaagtttgaaaggattggtaaattcagggaccaaaattcaaat 20309587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 157
Target Start/End: Complemental strand, 38642874 - 38642835
Alignment:
Q  118 ggacgaaaattcaaatagcctatatttgcagggacgaaac 157  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  38642874 ggacgaaaattcaaatagtctatatttgcagggatgaaac 38642835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 46670539 - 46670618
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    ||||||||||||||||||  | || | || ||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||    
T  46670539 aaatgattaatatttgcaatgacaaaatggaagaattagtaacttcagggatgaaaattcaaatgacctatatttacagg 46670618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 32717105 - 32717203
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| ||| |||||||| | || |||||||||||| || | ||| ||||| ||||||  |||||| || |||||| ||||  ||||||||||    
T  32717105 aaatgattaatttttacaggggcaaaatggaaggattagtaagtttagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaag 32717203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 45278646 - 45278549
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||    
T  45278646 tcaaatgattagtaattacaggggcaaaatggaaggattagtaaattcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 45278549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 1756652 - 1756552
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || || ||| |||| | ||||||||    
T  1756652 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacaaggatgaaaaatatatttaa 1756553  T
Q  168 g 168  Q
    |    
T  1756552 g 1756552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 2944664 - 2944764
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || | |||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  2944664 tcaaatgattagtaattacaggggcaaaatggatggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 2944763  T
Q  168 g 168  Q
    |    
T  2944764 g 2944764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 11026630 - 11026730
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || ||||||| |||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  11026630 tcaaatgattagtaattacaggggcaaaatggaaggattggtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 11026729  T
Q  168 g 168  Q
    |    
T  11026730 g 11026730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 22736688 - 22736788
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | ||  |||||||||||  ||| ||| ||||| ||||||  |||||| || |||||| |||| ||||||||||    
T  22736688 tcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaa 22736787  T
Q  168 g 168  Q
    |    
T  22736788 g 22736788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 30654742 - 30654678
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||| |||||||||| |||||  | |||||||||| | |||||| || ||||||||    
T  30654742 attagtaacttcatggacgaaaatgcaaatgacatatatttgcaagaacgaaagacctatttaag 30654678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 43105335 - 43105235
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||| ||||| || || |||||||| | ||||||||||||||| |||| ||| ||||| |||||  ||||||| || || ||| | || ||||||||||    
T  43105335 tcaaaagattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacaaggatgtaaaacatatttaa 43105236  T
Q  168 g 168  Q
    |    
T  43105235 g 43105235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 111; Significance: 4e-56; HSPs: 3)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10877 - 11044
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||| |       |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  10877 tgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgtaggggcggattgaa 10976  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    | |||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  10977 aagattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 11044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 10777 - 10658
Alignment:
Q  55 ttaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacga 154  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||| |||||||||||||||| || |||||||||||||  ||    
T  10777 ttaggaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattaataatttcagggacgaaaattcaaatggcttatatttgcaggggtga 10678  T
Q  155 aacacatatttaagtctttt 174  Q
    || || |||||||| |||||    
T  10677 aagacctatttaagcctttt 10658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 10786 - 10849
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattta 166  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||    
T  10786 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 10849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37563523 - 37563356
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||  |    
T  37563523 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattaga 37563424  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  37563423 aggattagtaaattcagggacgaaaattcaaatggcctatatttgcagggacaaaagacatatttaag 37563356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 26825799 - 26825626
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||| | ||||||| |        ||||||| |||||||||||||||||||||| ||||||||||||||||| |    
T  26825799 tgccacatgggcaccacgtcgctaatgacaactcacctcagcaaaaaaatctaattaagaccaaaagtcaaatgattaatctttgcaggggcagattgga 26825700  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    | |||||||||||||| ||||||||||||||||  ||||||||| ||||||||||| ||||||||||| |||||    
T  26825699 atgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcctttt 26825626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 34454649 - 34454486
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |       |||||    || |||||||||||||||||||||||||||||| |||||| |    
T  34454649 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaa----gatcaaaagtcaaatgattaatatttgcaggggtagattgga 34454554  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||||  |||||||||||    
T  34454553 aggattagtaacttcaaagacgaaaattcaaatgacctatatttgcagggacgaaggacatatttaag 34454486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 43938160 - 43938276
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||| |||    
T  43938160 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcaagga 43938259  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  43938260 cgaaagacatatttaag 43938276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 43938063 - 43937896
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||  |||||||||| |||||||||||||||||| |        ||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  43938063 tgccacatgtacaccacgtcgttaatgacagcccacctcagcaaaaaaatctaattatgaccaaaagtcaaatgattaatatttgcaggggcagattgga 43937964  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| || |||||||| |||||||||||    
T  43937963 aggattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaaagacatatttaag 43937896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 5636243 - 5636406
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    |||||||||||||||| ||||||||||||||||||||||       |||||||||||||||| ||||||| |||||  ||||||| ||||||||| ||||    
T  5636243 cacatgggcaccacgttgctaatgacagcccacctcaactaaaaaacctaattaggaccaaatgtcaaataattaaattttgcagtggcagattggaagg 5636342  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||| ||||||||||||||||  | |||||||||| |||||||| || |||||||    
T  5636343 attagtaacttcagggacgaaaattcaaattacttatatttgcaaggacgaaagacctatttaa 5636406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 37563622 - 37563736
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  37563622 attaggaccaaaagtcaaaagattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttacagggacg 37563721  T
Q  154 aaacacatatttaag 168  Q
    ||| |||||||||||    
T  37563722 aaagacatatttaag 37563736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 12931004 - 12931115
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||  || |||||||||||||    
T  12931004 taattaggaccaaaagtcaaatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatgaccaatatttgcaggga 12931103  T
Q  152 cgaaacacatat 163  Q
    ||||| ||||||    
T  12931104 cgaaagacatat 12931115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 12930929 - 12930774
Alignment:
Q  13 accacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaac 112  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||     
T  12930929 accacgtcgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcaaaatggaaggattagtaag 12930830  T
Q  113 ttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||| ||| ||||| ||||||  |||||| ||||||||| ||||  ||||||||||    
T  12930829 ttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaag 12930774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 12928305 - 12928421
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  12928305 taattagaaccaaaagtcaaatgattgatatttgcagcggcagattaaaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcaggga 12928404  T
Q  152 cgaaacacatatttaag 168  Q
    | ||| || ||||||||    
T  12928405 caaaagacctatttaag 12928421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 12929520 - 12929636
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||| ||||||||||  || |||||||||||||    
T  12929520 taattaggaccaaaagtcaaatgattaatatttgcacgggcagattggaaggattagtcacttcagggacggaaattcaaatgaccaatatttgcaggga 12929619  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  12929620 cgaaagacatatttaag 12929636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 26825904 - 26826018
Alignment:
Q  60 accaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacac 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  | |||||||||||| |||||| ||    
T  26825904 accaaaagtcaaatgattaatatttgcaggggcagattgaaaggattaataacttcatggacgaaaattcaaatgacatatatttgcaggaacgaaagac 26826003  T
Q  160 atatttaagtctttt 174  Q
     |||||||| |||||    
T  26826004 ctatttaagcctttt 26826018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 34454746 - 34454868
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||   |||||||||||||||    
T  34454746 taattagaaccaaaagtcaaatgattaatatttgcaggggcagattgaaagaattagtaacttcagggacgaaaattcaaatgatctatatttgcaggga 34454845  T
Q  152 cgaaacacatatttaagtctttt 174  Q
     ||||  | |||||||| |||||    
T  34454846 tgaaagtcctatttaagcctttt 34454868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 27558063 - 27558234
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc----ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagat 96  Q
    |||||||||||||||||||||||||||||||||||||||| |            |||||||||| ||||||||||||||||||||||||||  |||| |     
T  27558063 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaaaaactaattaggatcaaaagtcaaatgattaatatttgcaatggcaaaa 27558162  T
Q  97 tgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    || ||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  27558163 tggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 27558234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 12929445 - 12929289
Alignment:
Q  13 accacgtcgctaatgacagcccacctca-acnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaa 111  Q
    |||||||||||||||||||||||| ||| |        |||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||||||    
T  12929445 accacgtcgctaatgacagcccacgtcagaaaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcaaaatgggaggattagtaa 12929346  T
Q  112 cttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
     |||| ||| ||||| |||||||||||||||||||||||| ||||  ||||||||||    
T  12929345 gttcagggatgaaaaatcaaatagcctatatttgcagggatgaaatgcatatttaag 12929289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5280440 - 5280274
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||| ||||| || ||||||||| |||||||||||       |||| |||||||| ||| |||||| |||||||||| ||| ||||||||| |    
T  5280440 tgccacatgggtaccacatcactaatgacaacccacctcaacaaaaaaaccta-ttaggaccgaaattcaaattattaatatttacagtggcagattgga 5280342  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||   |||||||||||||| |||||||||||||||||||||| || ||||||||    
T  5280341 aggattagtaacttcagtaacgaaaattcaaatggcctatatttgcagggacgaaagacttatttaag 5280274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 47082014 - 47081844
Alignment:
Q  3 ccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaag 102  Q
    |||||| | ||||||||||||||||||| ||||||||| |       |||||||| |||||||| ||||||||||||||||| ||  |||||||||||||    
T  47082014 ccacattgacaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaagaccaaaaatcaaatgattaatatttacaatggcagattgaaag 47081915  T
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    ||||||||||||||  || ||||||||||||  | |||||||| |||||||||| || |||||||| ||||    
T  47081914 gattagtaacttcagagatgaaaattcaaatgacatatatttgaagggacgaaagacctatttaagccttt 47081844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 12928156 - 12928033
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    |||||||||||||||| |||||||||||||||| |||| || ||||||| ||||||||||||||| | |||||||||||||| | ||||||||||||||     
T  12928156 cctaattaggaccaaatgtcaaatgattaatatatgcatgg-cagattggaaggattagtaactttagggacgaaaattcaagtggcctatatttgcagc 12928058  T
Q  150 gacgaaacacatatttaagtctttt 174  Q
    ||||||| ||||||||||| |||||    
T  12928057 gacgaaagacatatttaagcctttt 12928033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 15827890 - 15827758
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| |       ||||||||  ||||||||||||||| ||||||||||||| |||||||||||    
T  15827890 tgccacatgggcaccacgttgctaatgacagctcacctcagcaaaaaaacctaattaaaaccaaaagtcaaatggttaatatttgcagtggcagattgaa 15827791  T
Q  101 aggattagtaacttcaaggacgaaaattcaaat 133  Q
    ||||||| |||||||||  ||||||||||||||    
T  15827790 aggattaataacttcaaaaacgaaaattcaaat 15827758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 47121492 - 47121660
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||||||||||||||||||| ||||| || ||||||| | |        ||||||||||||||||||||||||||||||  ||||||| || |||||||    
T  47121492 tgccacatgggcaccacgtcgttaatggcaacccacctaagcaaaaataacctaattaggaccaaaagtcaaatgattaaattttgcagtggtagattga 47121591  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||| |||||||||||||  ||||||||||||||| | | |||||||||||||||||| || ||||||||    
T  47121592 aagtattagtaacttcagagacgaaaattcaaatggtcaatatttgcagggacgaaagacctatttaag 47121660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 44545764 - 44545594
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||| ||||||||||||| | ||||||| |       |||||||||||||||||||||||| ||||   ||||||| ||||||| |||    
T  44545764 tgccacatgggcaccatgtcgctaatgacaactcacctcagcaaaaaaacctaattaggaccaaaagtcaaataattatattttgcagcggcagatcgaa 44545665  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtct 171  Q
    |  ||||||||||||| | ||||||||||||||  ||||||||||||| ||| ||| || |||||||||||    
T  44545664 ataattagtaacttcaggaacgaaaattcaaatgacctatatttgcagagacaaaagacctatttaagtct 44545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 20947295 - 20947196
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||| |||||||||| || |||||||    
T  20947295 tcaaatgattaatatttgtagtggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgaagggacgaaagacctatttaa 20947196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 20947408 - 20947576
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncct-aattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    ||||||||||||||||||||| |||||||||||||||||| |        || ||||| || ||||||| ||||||||||||||| ||| || ||||||     
T  20947408 tgccacatgggcaccacgtcgttaatgacagcccacctcagcaaaaaaaacttaattatgatcaaaagttaaatgattaatatttacagtggtagattgg 20947507  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||  || ||||||||||||| | |||||||||| | || ||| |||||||||||    
T  20947508 aaggattagtaacttcatagatgaaaattcaaataacttatatttgcaagcacaaaagacatatttaag 20947576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 23191118 - 23191218
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| | ||||| |||||||||| | ||||||||||||    
T  23191118 cctaattaggaccaaaagtcaaatgattaatatttgcagtggcagattggaagaattagtaaattc-atgacgataattcaaataacatatatttgcagg 23191216  T
Q  150 ga 151  Q
    ||    
T  23191217 ga 23191218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 5280553 - 5280653
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  | |||||| |||||||||||||||||| ||||||||||||||||  |||||||||||| |||| ||| || |||||||    
T  5280553 tcaaatgattaatatttgcaatgacagattcaaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaa 5280652  T
Q  168 g 168  Q
    |    
T  5280653 g 5280653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 35262794 - 35262629
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||  |||||||| ||| ||||||||| |       | |||||| || ||||||||||||||||||  ||||||| ||||||||| |    
T  35262794 tgccacatgggcaccatatcgctaataacaacccacctcagcaaaaaaac-taattatgatcaaaagtcaaatgattaaattttgcagtggcagattgga 35262696  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctata-tttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||  ||| ||||||||||| | ||||| ||||||||||||||| || |||||||    
T  35262695 aggattagtaacttcagagacaaaaattcaaat-gactatattttgcagggacgaaagacctatttaa 35262629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 15827981 - 15827916
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  15827981 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 15827916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 25049438 - 25049543
Alignment:
Q  63 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacata 162  Q
    |||||||||||||||||  ||||||| |||| |||| || |||||||||||||| |||  |||||||||||  ||||||||| ||||||||||| || ||    
T  25049438 aaaagtcaaatgattaaattttgcagtggcatattggaaagattagtaacttcagggagaaaaattcaaatgacctatatttacagggacgaaagaccta 25049537  T
Q  163 tttaag 168  Q
    ||||||    
T  25049538 tttaag 25049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 27557972 - 27558037
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  27557972 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 27558037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 27557950 - 27557862
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||||  |||| | || ||| |||| |||||||||||||||||||||||||  ||||||||| |||||||||||    
T  27557950 tcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaa 27557862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 5636127 - 5636041
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaa 155  Q
    ||||||||||||||||||||  |||| || ||| ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||    
T  5636127 tcaaatgattaatatttgcaatggcaaatggaa-ggattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaa 5636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 7159197 - 7159315
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    |||||||| |||| |||||||||||||||||||||||  | || | | ||||||||||||||| | ||||||||||||||   ||||||||||||||| |    
T  7159197 attaggacgaaaattcaaatgattaatatttgcagggtaaaatggga-ggattagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatg 7159295  T
Q  154 aaacacatatttaagtcttt 173  Q
    ||  ||||||||||| ||||    
T  7159296 aatgacatatttaagccttt 7159315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 7158350 - 7158233
Alignment:
Q  51 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    |||||||||||| |   ||||||||||||||||| |||||||| | || |||||||||||| |||| ||| ||||| |||||| ||||||| ||| ||||    
T  7158350 ctaattaggaccgattctcaaatgattaatatttacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaatggcctataattgtaggg 7158251  T
Q  151 acgaaacacatatttaag 168  Q
    | ||||  ||||||||||    
T  7158250 atgaaatgcatatttaag 7158233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 19980190 - 19980274
Alignment:
Q  83 ttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||| || |||| || |||||||    
T  19980190 ttgcagtggcagattgaaatgattagtaacttcaaggacaaaaattcaaatgacttatatttgcagtgatgaaagacctatttaa 19980274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 47082129 - 47082212
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||||||| || ||||||||||||||||||||||||     ||||||||||||||| | |||||||| || ||||||||    
T  47082129 tcaaatgattaatatttgtagtggcagattgaaaggattagtaact-----gacgaaaattcaaatggtctatattttcatggacgaaa 47082212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 20947317 - 20947384
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||| |  ||||||||||    
T  20947317 gattagtaacttcaaggacgaaaattcaaatgacctatatttgaagggacgaaatatctatttaagtc 20947384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 729790 - 729846
Alignment:
Q  182 tgtgattcaccaatcaatgaattcacaatttcataaaactcaattcttctccttctct 239  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  729790 tgtgattcaccaatcaatgaattcacaatttcat-aaactctattcttctcattctct 729846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 12929514 - 12929449
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  12929514 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 12929449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 12930998 - 12930933
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||| ||||||| ||||||||||||||||  |||||||||||||||| ||||||| ||||||||    
T  12930998 gattagaaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaacacctatttaag 12930933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 26825890 - 26825825
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  26825890 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaatacctatttaag 26825825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 34454740 - 34454675
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  34454740 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 34454675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 37563614 - 37563549
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  37563614 gattagtaacttcagggacgaaaattcaaatgccctatatttgcagggatgaaagacttatttaag 37563549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 26830007 - 26830122
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||  ||| | ||||||||||||||||||| |||| | || ||||||||||||||||| | | ||||||| |||  ||||||| ||| |||||    
T  26830007 taattaggactgaaattaaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcatgaatgaaaattaaaacggcctatacttgtaggga 26830106  T
Q  152 cgaaacacatatttaa 167  Q
    | ||| || |||||||    
T  26830107 ctaaagacctatttaa 26830122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 45586631 - 45586584
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggg 150  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  45586631 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcaggg 45586584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 19980074 - 19980139
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||   ||||||||| | |||||||| || ||||||||    
T  19980074 gattagtaacttcaaggacgaaaattcaaatgatctatatttggaaggacgaaagacctatttaag 19980139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 44545879 - 44545976
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||  || | | |  ||||||||||||||||| ||||||||||||||||  | | |||||||| |||||||| || |||||||    
T  44545879 aaatgattaatatttgcaatggtaaaattgaaggattagtaacttcagggacgaaaattcaaatgacttgtatttgcatggacgaaagacctatttaa 44545976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 27480745 - 27480845
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || ||||||||||||  ||||||| ||||| |||||  ||||||| || |||||| |||| ||||||||||    
T  27480745 tcaaatgattagtaattacaggggcaaaatggaaggattagtaaaatcaaggatgaaaaatcaaacggcctataattacagggatgaaaaacatatttaa 27480844  T
Q  168 g 168  Q
    |    
T  27480845 g 27480845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 47082107 - 47082043
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||| |||||||| ||||||||||||||||   |||||||||||||||||||| || |||||||    
T  47082107 gattaataacttcagggacgaaaattcaaatgaactatatttgcagggacgaaagacttatttaa 47082043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 47738979 - 47739058
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaa 131  Q
    ||||||||||||||  | || ||||||||||||||||||||| ||||  ||||||||||| | || |||| |||||||||    
T  47738979 taattaggaccaaattttaagtgattaatatttgcaggggcaaattgggaggattagtaaatacagggactaaaattcaa 47739058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 38643650 - 38643552
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| ||| |||| ||| | ||  |||||||||||  ||||||| ||||| |||||| ||||||| ||||||||| ||||  ||||||||||    
T  38643650 aaatgattaatttttacaggagcaaaatgggaggattagtaaggtcaaggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 38643552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 22661459 - 22661362
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||||||| ||||| |||||  ||||||| || |||||| ||||  |||||||    
T  22661459 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcaaggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 22661362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 40022527 - 40022623
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    ||||||| ||||||||||||| | || | || ||||||||||||  ||| ||| |||| ||||||| | ||||||||||||||| |||| ||||||||    
T  40022527 tcaaatgcttaatatttgcagtgacaaaatggaaggattagtaagatcagggatgaaatttcaaat-gactatatttgcagggatgaaatacatattt 40022623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 43938154 - 43938101
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||| ||||    
T  43938154 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaa 43938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 5636150 - 5636202
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||| ||||||||||||||||  | |||||||| ||||||||||    
T  5636150 attagtaacttcagggacgaaaattcaaatgacttatatttgaagggacgaaa 5636202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 39525750 - 39525678
Alignment:
Q  96 ttgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| | ||||||||||||||||||  |    ||||||||||||  |||||||||||||||    
T  39525750 ttgaaaggattagtaagtacaaggacgaaaattcaaacggatcctatttgcagggattaaacacatatttaag 39525678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 31695598 - 31695709
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    ||||||||||||  |||| ||||||| | ||||||||  | | || |||||||||||| || | ||| |||| |||||||  |||||||||||||||| |    
T  31695598 attaggaccaaatttcaagtgattaacaattgcagggaaaaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatg 31695697  T
Q  154 aaacacatattt 165  Q
    |||  |||||||    
T  31695698 aaatgcatattt 31695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 173
Target Start/End: Complemental strand, 37284209 - 37284106
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagt 169  Q
    ||||||||| || ||||||||||| | ||  |||||||||||  ||| ||| ||||| |||||| ||||||| || |||||| ||||  ||||||||||     
T  37284209 aaatgattagtaattgcaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaagc 37284110  T
Q  170 cttt 173  Q
    ||||    
T  37284109 cttt 37284106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 47733138 - 47733059
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaa 131  Q
    ||||||||||||||  | || ||||||||||||||||||| | ||||  ||||||||||| | || |||| |||||||||    
T  47733138 taattaggaccaaattttaagtgattaatatttgcaggggtaaattgggaggattagtaattacagggactaaaattcaa 47733059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 19980052 - 19979979
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatat 142  Q
    ||||||||||||||||||||  |||| | || || ||||||||||||| |||| ||||||||||||  |||||||    
T  19980052 tcaaatgattaatatttgcaacggcaaaatggaatgattagtaacttc-aggatgaaaattcaaatgacctatat 19979979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 47121408 - 47121454
Alignment:
Q  110 aacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||| ||||||||||||||||  |||||||||||||||| ||||    
T  47121408 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 47121454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 5280531 - 5280466
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||| ||||||||||||||||||||| | ||||||| |  || |||||| || ||||||||    
T  5280531 gattagtaagttcaaggacgaaaattcaaatggtctatattcgttggaacgaaagacctatttaag 5280466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 12928299 - 12928234
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||| |||||| ||||||||||||||||  | |||||||||||||  |||| || ||||||||    
T  12928299 gattagtgacttcagggacgaaaattcaaatgacttatatttgcaggggtgaaagacctatttaag 12928234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 31694589 - 31694476
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||  |||| ||||||| | ||||| ||  ||| ||  ||||||||||| || | ||| |||| ||||||| | |||||||||||||||    
T  31694589 taattaggaccaaatttcaagtgattaacaattgcatggaaagaatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcaggga 31694490  T
Q  152 cgaaacacatattt 165  Q
     ||||  |||||||    
T  31694489 tgaaatgcatattt 31694476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 35262879 - 35262818
Alignment:
Q  109 taacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||| | | |||||||||||| || ||||||||||||||||||| |  ||||||||||    
T  35262879 taacttcaggaaagaaaattcaaattgcttatatttgcagggacgaaatatctatttaagtc 35262818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 34561237 - 34561201
Alignment:
Q  182 tgtgattcaccaatcaatgaattcacaatttcataaa 218  Q
    |||||||||||||| |||||||||| |||||||||||    
T  34561237 tgtgattcaccaattaatgaattcataatttcataaa 34561201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 44545854 - 44545790
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| | | ||||||||||||||  |||||||||||| | |||||| || ||||||||    
T  44545854 attagtaacttaatgaacgaaaattcaaatgacctatatttgcaagaacgaaagacctatttaag 44545790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 13480423 - 13480590
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  13480423 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgtaggggcagattgga 13480522  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  ||||||||| || |||||||| |||||||||||    
T  13480523 aggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacatatttaag 13480590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21880533 - 21880366
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||| |||||||||||||||||| |       ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21880533 tgccacatgggcaccacgtcggtaatgacagcccacctcagcaaaaaaacctaattagtaccaaaagtcaaatgattaatatttgcaggggcagattgaa 21880434  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||||  |||||||||||||||  | ||||||| |||| |||||| |||||||||||    
T  21880433 aggattagtaacttcagagacgaaaattcaaatgacttatatttacaggaacgaaagacatatttaag 21880366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 13480326 - 13480210
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  13480326 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcaggga 13480227  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  13480226 cgaaagacatatttaag 13480210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5064504 - 5064337
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||| |        ||||||||||||||||||||||||||||||||||||||||||| ||||      
T  5064504 tgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggg 5064405  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  | ||||||| ||||||||||| |||||||||||    
T  5064404 aggattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaag 5064337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 22494095 - 22494261
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||| || ||||||||||| |||||||| |       || ||||||||||||||||||||||||| |||||||||||||||||||| |    
T  22494095 tgccacatgggcaccatgttgctaatgacagtccacctcagcaaaaaaacccaattaggaccaaaagtcaaatgattgatatttgcaggggcagattgga 22494194  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||    
T  22494195 aggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggac-aaaaacatatttaag 22494261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23291959 - 23292126
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||| ||| ||| |       ||||||||||| |||||||||||||||||||||||||||||  |||||| |    
T  23291959 tgccacatgggcaccacgtcgctaatgacagctcacttcagcaaaaaaacctaattaggatcaaaagtcaaatgattaatatttgcagggatagattgga 23292058  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||||    
T  23292059 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacatatttaag 23292126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15819704 - 15819877
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    |||||||||||||| ||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| |||||||| ||| ||||||     
T  15819704 tgccacatgggcactacgtcgctaatgacagcccacctcagcaaaaaaaatctaattaggaccaaaagtcaaatgattagtatttgcaagggtagattgg 15819803  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||    
T  15819804 aaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagccttt 15819877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 23291862 - 23291746
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||||||| |||||    
T  23291862 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctatatttgtaggga 23291763  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  23291762 cgaaagacatatttaag 23291746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 5064601 - 5064716
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||||||||||||| ||    
T  5064601 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctatatttgcagaga 5064700  T
Q  152 cgaaacacatatttaa 167  Q
    ||||| ||||||||||    
T  5064701 cgaaagacatatttaa 5064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 737963 - 738079
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  737963 taattaggaccaaaagtcaaatgattaatacttgaaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcaggga 738062  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  738063 cgaaagacatatttaag 738079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 20561046 - 20560930
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||  ||||||||||||||||    
T  20561046 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaatgattaataactacagggacgaaaattcaaatgacctatatttgcaggga 20560947  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  20560946 cgaaagacatatttaag 20560930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 32337682 - 32337567
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  32337682 taattaggcccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcaggga 32337583  T
Q  152 cgaaacacatatttaa 167  Q
    ||||| || |||||||    
T  32337582 cgaaagacctatttaa 32337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 30234868 - 30234974
Alignment:
Q  62 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacat 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| | ||||||||||||||||||||| ||||    
T  30234868 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaaagacat 30234967  T
Q  162 atttaag 168  Q
    |||||||    
T  30234968 atttaag 30234974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 3299725 - 3299561
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    |||||||||||||||| ||||||||||||||||||| ||       ||||||||||| ||||||| ||||||||||||||||||  |||| |||| || |    
T  3299725 cacatgggcaccacgttgctaatgacagcccacctcgacaaaaaaacctaattaggatcaaaagtgaaatgattaatatttgcaatggcaaattggaatg 3299626  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||| ||||||||||||||||  | ||||||||||| ||||||| || ||||||||    
T  3299625 attagtaacttcatggacgaaaattcaaatgacttatatttgcagagacgaaagacctatttaag 3299561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 7612762 - 7612937
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn--cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattg 98  Q
    |||||||||| ||||||||||||||||||||||||||||| |         |||||||| |||||||||||||||||||||  ||||||| |||||||||    
T  7612762 tgccacatggacaccacgtcgctaatgacagcccacctcagcaaaaaaaaacctaattatgaccaaaagtcaaatgattaaattttgcagtggcagattg 7612861  T
Q  99 aaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
     || |||| |||| |||| ||||||||||||||||||| ||||||| |||| |||||| || ||||||||||||||    
T  7612862 gaaagattggtaatttcagggacgaaaattcaaatagcttatatttacaggcacgaaagacctatttaagtctttt 7612937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 32337779 - 32337948
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc---ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagatt 97  Q
    ||||||||||||||||| | |||||||||||||||||||| |           ||||||||||| ||||||||||||||||||||||||||||||| |||    
T  32337779 tgccacatgggcaccacattgctaatgacagcccacctcagcaaaaaaaaaatctaattaggacgaaaagtcaaatgattaatatttgcaggggcatatt 32337878  T
Q  98 gaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    | |||||| |||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||||    
T  32337879 ggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgca-ggacgaaagacatatttaag 32337948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 3299841 - 3299941
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  3299841 tcaaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaa 3299940  T
Q  168 g 168  Q
    |    
T  3299941 g 3299941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 20774298 - 20774463
Alignment:
Q  3 ccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaag 102  Q
    |||| |||||||||||||||||||||||||||| |||| |        ||||||| |||||||||||||||||||||  ||||||| |||||||||||||    
T  20774298 ccacttgggcaccacgtcgctaatgacagcccaactcagcataaaaatctaattatgaccaaaagtcaaatgattaaattttgcagtggcagattgaaag 20774397  T
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
     |||||||||||||  ||||||||| |||||  ||||||||||||| ||||||| || ||||||||    
T  20774398 aattagtaacttcagagacgaaaatacaaatgacctatatttgcagagacgaaagacctatttaag 20774463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 21880630 - 21880746
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||| || |||||||| |||||    
T  21880630 taattaggaccaaaagtcaaatgcttaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaattgcatatatttggaggga 21880729  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  21880730 cgaaagacctatttaag 21880746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 26503621 - 26503736
Alignment:
Q  53 aattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||| ||||||||||||||||  | |||||||||||||||    
T  26503621 aattaggaccaaaagtcaaatgattaatatttgcagtggcggattggaaggattaataacttcatggacgaaaattcaaatgacttatatttgcagggac 26503720  T
Q  153 gaaacacatatttaag 168  Q
    |||| || ||||||||    
T  26503721 gaaaaacctatttaag 26503736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26542832 - 26542990
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc---ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagatt 97  Q
    |||||||||||||||||||||||||||||||||||||||| |           |||||||||||||||||||||||||||||||||||| | ||| ||||    
T  26542832 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcggtggccgatt 26542931  T
Q  98 gaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||  |||||||||||||  |||||||| ||||||  |||||||||||||||||||||    
T  26542932 gaaattattagtaacttcagagacgaaaactcaaatgacctatatttgcagggacgaaa 26542990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 9607592 - 9607686
Alignment:
Q  62 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  9607592 caaaagtcaaatgattaatatttgcaggggcatattagaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaa 9607686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 20561193 - 20561274
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  20561193 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattaataacatcaaggacgaaaattcaaat 20561274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 1066308 - 1066143
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    |||||||||||||||| ||||||||||||||||||||||| |        ||||||||||||||||| |||||| |||||  ||||||| | ||||||||    
T  1066308 tgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggaccaaaattcaaattattaaattttgcagtgacagattga 1066209  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    |||||||| |||||| ||||||||||||||||||  ||||||||| || |||| ||| || |||||    
T  1066208 aaggattaataactttaaggacgaaaattcaaatgacctatatttacaaggacaaaagacttattt 1066143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 168
Target Start/End: Complemental strand, 20994965 - 20994821
Alignment:
Q  23 taatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacg 122  Q
    |||||||||||||||||| |       |||||||| |||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||  ||||    
T  20994965 taatgacagcccacctcagcaaaaaaacctaattatgaccaaaagttaaatgattaatatttgcaggg-cagattagaaggattagtaacttcagagacg 20994867  T
Q  123 aaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||   |||||||| ||||||||||| |||||||||||    
T  20994866 aaaattcaaatgaactatatttacagggacgaaagacatatttaag 20994821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 168
Target Start/End: Original strand, 20994965 - 20995073
Alignment:
Q  60 accaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacac 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||  | | ||||||||| ||||||| ||    
T  20994965 accaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacttctatttgcagagacgaaagac 20995064  T
Q  160 atatttaag 168  Q
     ||||||||    
T  20995065 ctatttaag 20995073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 3586378 - 3586214
Alignment:
Q  3 ccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaag 102  Q
    ||||||||||||||||||||||||||||| |||||| | |       |||||||| ||||| |||||||||||||||  ||||||| ||||||||  |||    
T  3586378 ccacatgggcaccacgtcgctaatgacagtccaccttagcgaaaaaacctaattaagaccagaagtcaaatgattaaattttgcagtggcagatttgaag 3586279  T
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||| ||||| |  |||||||||||||||  |||||||||||| |||||||| || ||||||||    
T  3586278 gattagcaactttagagacgaaaattcaaatgacctatatttgca-ggacgaaagacctatttaag 3586214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 22493998 - 22493907
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatattt 144  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||  |||||||||    
T  22493998 taattaggaccaaaagtcaaatgattaatatttgca-gggtagattgaaaagattagtaacttcagggacgaaaattcaaatgacctatattt 22493907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 16704613 - 16704691
Alignment:
Q  90 ggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  16704613 ggcagattggaaggattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaag 16704691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 7612650 - 7612550
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  | || | |||||| ||||||||||||| |||||||||||||||| | |||||||||||||||||||| || |||||||    
T  7612650 tcaaatgattaatatttgcaatgacaaaatgaaagaattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 7612551  T
Q  168 g 168  Q
    |    
T  7612550 g 7612550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 31386901 - 31386801
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||   ||| | || ||||||||| ||||||||||||||| ||||||||| ||||||||| |||||| ||||||| |||||||    
T  31386901 tcaaatgattaatatttgcaattgcaaaatggaaggattagcaacttcaaggacgaatattcaaatatcctatatttacagggatgaaacacctatttaa 31386802  T
Q  168 g 168  Q
    |    
T  31386801 g 31386801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 31879675 - 31879828
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaag 102  Q
    ||||||||||||||| ||||||||||||||||||||| |         ||||||| |||||||||||||||||||||  |||||||   ||||||| ||     
T  31879675 cacatgggcaccacgccgctaatgacagcccacctcagcaaaaaaaagctaattatgaccaaaagtcaaatgattaaattttgcagtaacagattggaat 31879774  T
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
     ||||||||||||| ||| | ||||||||||  |||||||||| ||||||||||    
T  31879775 tattagtaacttcagggatgcaaattcaaatgacctatatttgtagggacgaaa 31879828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 8427316 - 8427202
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacg 153  Q
    |||||||  |||| |||| ||||||||||||||||||||| | ||  |||||||||||||| |  |||||||||||||||  |||||||||||| ||| |    
T  8427316 attaggatgaaaattcaactgattaatatttgcaggggcaaaatgggaggattagtaacttgagagacgaaaattcaaatgacctatatttgcaaggatg 8427217  T
Q  154 aaacacatatttaag 168  Q
    ||| |||||||||||    
T  8427216 aaagacatatttaag 8427202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 20561187 - 20561122
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||||||    
T  20561187 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaag 20561122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 16706934 - 16707017
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    ||||||||| ||||||| | | ||||||||| || |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  16706934 tcaaatgataaatattt-ctgtggcagattggaatgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggac 16707017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 26542719 - 26542616
Alignment:
Q  68 tcaaatgattaa-tatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttg--cagggacgaaacacatatt 164  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||||||||  | ||||||||   |||||||||| || ||||    
T  26542719 tcaaatgattaaatatttgcagtggcagattgaaatgattagtaacttcagggacgaaaattcaaatgacatatatttgtaaagggacgaaaaacctatt 26542620  T
Q  165 taag 168  Q
    ||||    
T  26542619 taag 26542616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 156
Target Start/End: Original strand, 31393450 - 31393553
Alignment:
Q  53 aattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    |||||||||||||||||||||||||||  ||||| | |||| |||| ||| ||||||||||||| | | ||||||| |||||  |||| |||||||||||    
T  31393450 aattaggaccaaaagtcaaatgattaaattttgcggtggcatattggaagaattagtaacttcatgaatgaaaattgaaataagctatgtttgcagggac 31393549  T
Q  153 gaaa 156  Q
    ||||    
T  31393550 gaaa 31393553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 19039061 - 19039155
Alignment:
Q  58 ggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    |||| ||||||||| || ||||||||||||| | ||| |||||| ||||||||||||||| |   |||||||||||| |||||||||||||||||    
T  19039061 ggacaaaaagtcaagtgtttaatatttgcagtgccagtttgaaatgattagtaacttcaaagtataaaattcaaataacctatatttgcagggac 19039155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 22494004 - 22494070
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagt 169  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||| |||| || |||||||||    
T  22494004 gattagtaacttcagggacgaaaattcaaataacctatatttgcagggatgaaagacttatttaagt 22494070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 17784385 - 17784489
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagt 169  Q
    |||||||||||||||||||||||| | ||  ||||||||||| |||| ||| ||||| |||||| ||||||  ||||||||| ||||  ||||||||||     
T  17784385 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcatggatgaaaaatcaaatggcctatcattgcagggatgaaaagcatatttaagc 17784484  T
Q  170 ctttt 174  Q
    |||||    
T  17784485 ctttt 17784489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 20774191 - 20774087
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  | || | ||||||||||| |||||||||||||||||||||||||  | |||||||| | ||| |||| || |||||||    
T  20774191 tcaaatgattaatatttgcaatgacaaaatgaaaggattaataacttcaaggacgaaaattcaaatgacatatatttgtaaggatgaaagacctatttaa 20774092  T
Q  168 gtctt 172  Q
     ||||    
T  20774091 atctt 20774087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 19296509 - 19296608
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| || ||||||  |  ||||||||||||| | ||||||||||||||  | |||||||||| |||||||| || |||||||    
T  19296509 tcaaatgattaatatttgcagtggtagattggcaaaattagtaacttcaggaacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaa 19296608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 23291868 - 23291933
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  23291868 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 23291933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 3586495 - 3586578
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||  |||| | || ||||| |||||| ||   |||||||||||||||||| ||||||||||||||||||||    
T  3586495 aaatgattaatatttgcaatggcaaaatggaaggaatagtaattt---ggacgaaaattcaaatagtctatatttgcagggacgaaa 3586578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 13480333 - 13480397
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  13480333 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaaaacctatttaag 13480397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 31879559 - 31879461
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||| |||||||||||||  |||| | || || |||||||||||||  |||||||||||||||| | | |||||||||||||||||| || |||||||    
T  31879559 tcaaattattaatatttgcaatggcaaaatggaaagattagtaacttcggggacgaaaattcaaat-gaccatatttgcagggacgaaagacctatttaa 31879461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 3586471 - 3586406
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| | ||||||||||||||||  |||||||||| |||||||||| || ||||||||    
T  3586471 gattagtaactttagggacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaag 3586406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 32337688 - 32337753
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  32337688 gattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 32337753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 5064594 - 5064530
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||| ||||||||||||||||   ||||||||||||||| |||| || ||||||||    
T  5064594 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaag 5064530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 19296487 - 19296423
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||| ||| ||||||||||||  ||||||||||||||||||| | || |||||||    
T  19296487 gattagtaacttcatggatgaaaattcaaatgacctatatttgcagggacgatagacctatttaa 19296423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21544584 - 21544532
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||  |||||||||||||||  |||||||||||||||||||||    
T  21544584 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggacgaaa 21544532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 26503466 - 26503418
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttca 116  Q
    |||||||||| |||||||||| || ||||||||||||||||||||||||    
T  26503466 tcaaatgatttatatttgcagtggtagattgaaaggattagtaacttca 26503418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 18865216 - 18865122
Alignment:
Q  74 gattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||||||| ||||  ||| ||||||||||||||| |  |||||||||||||||  | | |||||| |||||| ||| || ||||||||    
T  18865216 gattaatatttgcagtggcaatttggaaggattagtaactttatagacgaaaattcaaatgacttgtatttgtagggactaaagacctatttaag 18865122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 737957 - 737904
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| | | ||||||||||||  |||||||||||||||||||||    
T  737957 gattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaa 737904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 1066421 - 1066486
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    ||||||||||||||||||||  |||| | || ||  ||||||||||||| ||||||||||||||||    
T  1066421 tcaaatgattaatatttgcaatggcaaaatggaaatattagtaacttcagggacgaaaattcaaat 1066486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 3299819 - 3299766
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||| ||||||||||||  ||||| |||||||||||||||    
T  3299819 gattagtaacttcatggatgaaaattcaaatgacctatgtttgcagggacgaaa 3299766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 7612672 - 7612737
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||| | || ||||||||||||||||  | ||||||||||||||||||| || ||||||||    
T  7612672 gattagtaattccagggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaag 7612737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 21880624 - 21880571
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||| ||||    
T  21880624 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaa 21880571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 26503488 - 26503533
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcag 148  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||    
T  26503488 gattagtaacttcagggacgaaaattcaaatgacctatatttgcag 26503533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 26542741 - 26542806
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||  |||||| || ||||||||    
T  26542741 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagatacgaaagacctatttaag 26542806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 33400068 - 33399968
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  ||||||| || |||||| ||||  |||||||||    
T  33400068 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 33399969  T
Q  168 g 168  Q
    |    
T  33399968 g 33399968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 33401124 - 33401224
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||  ||| |||||||| | ||  ||||||||||| |||| ||| ||||| |||||  ||||||| ||||||||| ||||  |||||||||    
T  33401124 tcaaatgattaacttttacaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaacggcctataattgcagggatgaaaagcatatttaa 33401223  T
Q  168 g 168  Q
    |    
T  33401224 g 33401224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 15819643 - 15819605
Alignment:
Q  95 attgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  15819643 attggaaggattagtaacttcagggacgaaaattcaaat 15819605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 14656582 - 14656477
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||  ||| |||||||| | |   |||||||||||  ||| ||| ||||| ||||| |||||||| ||||||||| ||||  |||||||||    
T  14656582 tcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacagcctataattgcagggatgaaaagcatatttaa 14656483  T
Q  168 gtcttt 173  Q
    | ||||    
T  14656482 gccttt 14656477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 4116901 - 4116801
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||  ||| |||||||| | ||  |||||||||||  ||| ||| ||||| |||||  ||||||| || |||||| |||| ||||||||||    
T  4116901 tcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattacagggatgaaaaacatatttaa 4116802  T
Q  168 g 168  Q
    |    
T  4116801 g 4116801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 4117545 - 4117645
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||  ||| |||||||| | ||  |||||||||||  ||| ||| ||||| |||||  ||||||| || |||||| |||| ||||||||||    
T  4117545 tcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattacagggatgaaaaacatatttaa 4117644  T
Q  168 g 168  Q
    |    
T  4117645 g 4117645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 25253301 - 25253468
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||| |||||||| |||||||||| |    
T  25253301 tgccacatgggtaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattagtatttgcaagggcagattgga 25253400  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  25253401 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 25253468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 25317092 - 25317259
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||| |||||||| |||||||||| |    
T  25317092 tgccacatgggtaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattagtatttgcaagggcagattgga 25317191  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  25317192 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 25317259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 37945209 - 37945375
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||| || |||||||||||||||||||||||||| ||||||||||||    
T  37945209 tgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaaatctaattatgatcaaaagtcaaatgattaatatttgcaagggcagattgaa 37945308  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| |||||||||||| |||  ||||||||||||||||||||| |||||||||||    
T  37945309 aggattagtaacttcagggacgaaaattc-aatgacctatatttgcagggacgaaagacatatttaag 37945375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6421791 - 6421625
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||||||||||||||||  |||||||| |       |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6421791 tgccacatgggcaccacgtcgctaatgacaatccacctcagcagaaaaacctaattaggaccaaaagtcaaatgattaatatttgtaggggcagattgaa 6421692  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    | ||||||||||||||||||| |||||||||||  | ||||||||||||||||||| ||||||||||    
T  6421691 aagattagtaacttcaaggacaaaaattcaaatgacatatatttgcagggacgaaagacatatttaa 6421625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 13064627 - 13064791
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    ||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13064627 cacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaagg 13064726  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| |  |||||||||||||||  | ||||||||||||||||||| |||||||||||    
T  13064727 attagtaactttagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaag 13064791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 32052393 - 32052226
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||||||||||||||||||||| | |        |||||||||| ||||||||||||||||||||||||||||||| ||||| |    
T  32052393 tgccacatgggcaccacgtcgctaatgacagcccaccttagcaaaaaaatctaattaggatcaaaagtcaaatgattaatatttgcaggggcggattgga 32052294  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||| |||||||||||    
T  32052293 aggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaaaacatatttaag 32052226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 12991006 - 12991170
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    ||||||||||||||||||||||||||||||||||||| |        |||||||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  12991006 cacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggatcaaaagtcaaatgattaatatttgcaggggtagattggaagg 12991105  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||  |||||||||||||||  | ||||||||||||||||||| |||||||||||    
T  12991106 attagtaacttcagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaag 12991170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 33735482 - 33735315
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||| ||||||||||||||||||| ||||||||| |       ||||||||| ||||||||||||||||||||||||||||||| ||||||| |    
T  33735482 tgccacatggacaccacgtcgctaatgacatcccacctcagcaaaaaaacctaattagaaccaaaagtcaaatgattaatatttgcagggacagattgga 33735383  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| |||| ||||||||| |||||| ||||||||||| |||||||||| |||||||||||    
T  33735382 aggattagtaatttcagggacgaaaaatcaaatggcctatatttgtagggacgaaagacatatttaag 33735315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 20704932 - 20705100
Alignment:
Q  5 acatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagga 104  Q
    |||||||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  20704932 acatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgca-gggcagattgaaaaga 20705030  T
Q  105 ttagtaacttcaaggacgaaaattcaaatagcc--tatatttgcagggacgaaacacatatttaagtctt 172  Q
    ||||||||||||| |||||||||||||||  ||  ||||||| ||||||||||| |||||||||||||||    
T  20705031 ttagtaacttcaaagacgaaaattcaaatgacctatatatttacagggacgaaagacatatttaagtctt 20705100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 32052490 - 32052606
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  32052490 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 32052589  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| |||||||||||    
T  32052590 cgaaagacatatttaag 32052606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 33735579 - 33735701
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  33735579 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 33735678  T
Q  152 cgaaacacatatttaagtctttt 174  Q
    ||||| || |||||||| |||||    
T  33735679 cgaaagacctatttaagcctttt 33735701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 8323271 - 8323438
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||  ||||||||||| |||||| ||||||||||| |       ||||||||||||||||||||||||||||||||||||||  |||| | ||||    
T  8323271 tgccacataagcaccacgtcgttaatgatagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaatggcaaaatgaa 8323370  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||    
T  8323371 agaattagtaacttcaaggacgaaaattcaaatagcatatatttgcaggggcgaaagacctatttaag 8323438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 14745566 - 14745450
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||  ||||||||||||||||    
T  14745566 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcaggga 14745467  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  14745466 cgaaagacctatttaag 14745450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 7015678 - 7015510
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc-ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    |||||||| ||||||||||||||||||| |||||| |||| |         |||||||||||||||||||||||||||||||||||||| |||||||||     
T  7015678 tgccacataggcaccacgtcgctaatgatagcccatctcagcaaaaaaaaactaattaggaccaaaagtcaaatgattaatatttgcagtggcagattgg 7015579  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    || |||||||||||||| ||| |||||||||||| |||||||||||||||||||||| || ||||||||    
T  7015578 aatgattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaagacctatttaag 7015510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 25253204 - 25253088
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  25253204 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcaggga 25253105  T
Q  152 cgaaacacatatttaag 168  Q
     |||| |||||||||||    
T  25253104 tgaaagacatatttaag 25253088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 25316994 - 25316878
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  25316994 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcaggga 25316895  T
Q  152 cgaaacacatatttaag 168  Q
     |||| |||||||||||    
T  25316894 tgaaagacatatttaag 25316878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 18013830 - 18013981
Alignment:
Q  4 cacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaagg 103  Q
    |||||| ||||||||||||||||||||| |||||||| |       ||||||||  |||||||||||||| |||||||||||||| ||||||||||||||    
T  18013830 cacatgcgcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaaaaccaaaagtcaaataattaatatttgcagaggcagattgaaagg 18013929  T
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||| |||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  18013930 attggtaacttc-aggacgaaaatttaaatggcctatatttgcagggacgaaa 18013981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 14745582 - 14745690
Alignment:
Q  55 ttaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacga 154  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||| ||||||||||| ||||||||    
T  14745582 ttaggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaattcaaatggcctatatttgtagggacga 14745681  T
Q  155 aacacatat 163  Q
    || ||||||    
T  14745682 aagacatat 14745690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 37945112 - 37944996
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||  ||||||||| || |||    
T  37945112 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaagga 37945013  T
Q  152 cgaaacacatatttaag 168  Q
    ||||| || ||||||||    
T  37945012 cgaaagacctatttaag 37944996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 6421891 - 6422003
Alignment:
Q  55 ttaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacga 154  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||  | ||||||||||||| |||    
T  6421891 ttaggaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcagggacgaaaattcaaatgacttatatttgcaggggcga 6421990  T
Q  155 aacacatatttaa 167  Q
    || || |||||||    
T  6421991 aagacctatttaa 6422003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22533559 - 22533387
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||| |       |||||||| |||||||||| ||||||||||  |||| || ||||||||| |    
T  22533559 tgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaacctaattatgaccaaaagttaaatgattaaattttgtagtggcagattgga 22533460  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    | ||||| |||||||| ||||||||||||||||  |||||||||||| || ||||| || |||||||| ||||    
T  22533459 atgattaataacttcagggacgaaaattcaaatgacctatatttgcaagggcgaaagacctatttaagccttt 22533387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 27753648 - 27753493
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnn-cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattga 99  Q
    |||||||||||||||||||||||||||||| ||||||||| |        |||| |||  | ||||||||||||||||||||||||||| ||||| |||     
T  27753648 tgccacatgggcaccacgtcgctaatgacaacccacctcaccaaaaaaaacctatttataatcaaaagtcaaatgattaatatttgcagtggcagtttgg 27753549  T
Q  100 aaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||| |||||||||||| |||  |||||||||||||||||||||    
T  27753548 aaggattagtaacttcatggacgaaaattc-aatgacctatatttgcagggacgaaa 27753493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 41339523 - 41339378
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||| |||||||||||| |||||||| ||||||| |       ||||||||||||||||||||||||||| ||  ||||||| ||||||||| |    
T  41339523 tgccacatggacaccacgtcgctgatgacagctcacctcagcaaaaaaacctaattaggaccaaaagtcaaatgataaaattttgcagtggcagattgga 41339424  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgc 146  Q
    | |||||| ||||||| ||||||||||||||||  | |||||||||    
T  41339423 aagattagcaacttcagggacgaaaattcaaatgacttatatttgc 41339378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 7015791 - 7015891
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||   | |||||||||| |||||||| || |||||||    
T  7015791 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaacgacttatatttgcaaggacgaaagacctatttaa 7015890  T
Q  168 g 168  Q
    |    
T  7015891 g 7015891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 18013722 - 18013639
Alignment:
Q  60 accaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatt 143  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||  |||||||||||||||  ||||||||    
T  18013722 accaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcactgacgaaaattcaaatgacctatatt 18013639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 21261079 - 21261245
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||||||||||||||||| ||||||||| ||||||||| |       | |||||||||||||||||||||||| | |  ||||| | ||||||||| |    
T  21261079 tgccacatgggcaccacgtcactaatgacaacccacctcatcaaaaaaac-taattaggaccaaaagtcaaatgagtgaactttgcggtggcagattgga 21261177  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||| |||||||| ||| ||||| |||||   ||||| |||||||| |||||| |||||||||||    
T  21261178 aggattaataacttcatggatgaaaactcaaaggacctatctttgcaggaacgaaagacatatttaag 21261245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 18934815 - 18934715
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||| |||||||||||  |||| | |||||||||||||||||||| ||||||||||||||||  | |||||||||||||| |||| ||||||||||    
T  18934815 tcaaatgactaatatttgcaatggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttatatttgcagggatgaaagacatatttaa 18934716  T
Q  168 g 168  Q
    |    
T  18934715 g 18934715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 21260967 - 21260879
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||||  |||| | || ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  21260967 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 21260879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 22024152 - 22024252
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||||| |  |||||||||||||||  ||||||||||||| ||||||| || |||||||    
T  22024152 tcaaatgattaatatttgcagtggcaaattggaaggattagtaacttaagtgacgaaaattcaaatgacctatatttgcagagacgaaagacgtatttaa 22024251  T
Q  168 g 168  Q
    |    
T  22024252 g 22024252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 14744712 - 14744834
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||| |||| |||||||||||||||||||||||||| | ||  ||||||||||| |||| ||| ||||| ||||||  | |||| |||||||||    
T  14744712 taattaggacgaaaattcaaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacatataattgcaggga 14744811  T
Q  152 cgaaacacatatttaagtctttt 174  Q
     ||||  |||||||||| |||||    
T  14744812 tgaaatgcatatttaagcctttt 14744834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 16118073 - 16117964
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||        |||||||||||||| ||||||||||||||||  ||||||||| ||||    
T  16118073 cctaattaggaccaaaagtcaaatgattaaattttgcagtggcag--------gattagtaacttcagggacgaaaattcaaatgacctatatttacagg 16117982  T
Q  150 gacgaaacacatatttaa 167  Q
    ||| ||| || |||||||    
T  16117981 gacaaaagacctatttaa 16117964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 27753761 - 27753827
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaata 134  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||   |||||||||||||||    
T  27753761 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagaaacgaaaattcaaata 27753827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 18934978 - 18935094
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    ||||||||  ||||||||||||||||||||  ||||||| |||| |||  |||||||||||| |||| ||||||||| ||||||  ||||||||| ||||    
T  18934978 cctaattataaccaaaagtcaaatgattaaattttgcagtggcaaattagaaggattagtaatttcagggacgaaaa-tcaaatgacctatatttacagg 18935076  T
Q  150 gacgaaacacatatttaa 167  Q
    ||| ||| || |||||||    
T  18935077 gacaaaaaacctatttaa 18935094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 22533672 - 22533760
Alignment:
Q  68 tcaaatgattaatatttgcaggggcag-attgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||||  ||||  |||||| ||||||||||||||  ||||||||||||||||  |||||||||||||||||||||    
T  22533672 tcaaatgattaatatttgcaatggcaacattgaa-ggattagtaacttcggggacgaaaattcaaatgacctatatttgcagggacgaaa 22533760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 25253210 - 25253275
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  25253210 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 25253275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 27753739 - 27753674
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| | ||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  27753739 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 27753674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 34404585 - 34404486
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||  | || | || |||||||||||||||||  |||||||||||||||  |||||||||||||| |||||| || |||||||    
T  34404585 tcaaatgattaatatttgcaatgcca-aatggaaggattagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 34404487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 41339611 - 41339547
Alignment:
Q  106 tagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    ||||||||||| ||||||||||||||||   |||||||||||||||||||| |||||||||||||    
T  41339611 tagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacatatttaagtc 41339547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 8323180 - 8323247
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||||||||| |||| ||||||||||| |||||||||||| ||||||||| || ||||||||||    
T  8323180 gattagtaacttcagggacaaaaattcaaatggcctatatttgctgggacgaaagacctatttaagtc 8323247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 22024131 - 22024077
Alignment:
Q  102 ggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  22024131 ggataagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaa 22024077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 12990912 - 12990977
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  12990912 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 12990977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 13064533 - 13064598
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  13064533 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 13064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 18013736 - 18013801
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  18013736 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaag 18013801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 22533650 - 22533585
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||| |||||||||||||||| || ||||||||    
T  22533650 gattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagacctatttaag 22533585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 33735573 - 33735508
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  33735573 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 33735508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 25317000 - 25317048
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  25317000 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcaggga 25317048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 31119019 - 31118951
Alignment:
Q  106 tagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||||| |  |||||||| |||||    
T  31119019 tagtaacttcagggatgaaaattcaaatggcctatatttgcagggacgaaagatctatttaagcctttt 31118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 6421882 - 6421819
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattta 166  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||    
T  6421882 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 6421819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 8323158 - 8323059
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||| | ||  |||| | || ||||||||||||||||| ||||||||||||||||  |||||||||  ||||| |||| || |||||||    
T  8323158 tcaaatgattaatatcttcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgacctatatttatagggatgaaagacctatttaa 8323059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 39402132 - 39402210
Alignment:
Q  54 attaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaa 132  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||  ||||||||||| | || ||| ||||| |||||    
T  39402132 attaggaccaaaactcaaatgattaatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaaatcaaa 39402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 41339635 - 41339737
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||||||||||||||||   |||| | || || |||||||||||| | ||||||||||||||||  ||||||||| || | |||||  ||||||||||    
T  41339635 tcaaatgattaatatttgcgatggcaaaatggaatgattagtaactttatggacgaaaattcaaatgacctatatttacaagaacgaatgacatatttaa 41339734  T
Q  168 gtc 170  Q
    |||    
T  41339735 gtc 41339737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 16118211 - 16118146
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||| |  |||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  16118211 gattagtaactttagagacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 16118146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 21260989 - 21261054
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||| |||||||| | ||||||||||||||  ||||||||||||||||| ||| |||||||||||    
T  21260989 gattaataacttcaggaacgaaaattcaaatgacctatatttgcagggacaaaagacatatttaag 21261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 32052484 - 32052419
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||||| |||| || ||||||||    
T  32052484 gattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaaaacctatttaag 32052419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 20704844 - 20704774
Alignment:
Q  63 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    ||||||||||||||||||||||||| ||  | ||| ||||||||||||| |||| |||  |||||||||||    
T  20704844 aaaagtcaaatgattaatatttgcaaggataaattaaaaggattagtaatttcagggataaaaattcaaat 20704774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 34404607 - 34404673
Alignment:
Q  103 gattagtaacttcaaggacg-aaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||| |||||||||||  |||||||||||| |||||||| || ||||||||    
T  34404607 gattagtaacttcatggacggaaaattcaaatgacctatatttgcaaggacgaaagacttatttaag 34404673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 147383 - 147476
Alignment:
Q  63 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||| |||||||||||||||||  | ||| |||||| || ||||||||| |||| |||| |||||| ||||   ||||||||||||| ||||||    
T  147383 aaaaatcaaatgattaatatttttatgggtagattggaatgattagtaatttcagggacaaaaatttaaatgatctatatttgcaggaacgaaa 147476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 8673756 - 8673853
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatattt 165  Q
    |||||||||||| | ||||| ||||| | ||  || ||||| || |||||||| |||| ||||||| ||||||||||||||||| ||||  |||||||    
T  8673756 tcaaatgattaacaattgcaagggcaaaatgggagaattagcaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatattt 8673853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 12628318 - 12628257
Alignment:
Q  113 ttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtctttt 174  Q
    |||||||||||||||||||||  ||||||||| || |||||||  || ||||||||||||||    
T  12628318 ttcaaggacgaaaattcaaatgacctatatttacatggacgaaggacctatttaagtctttt 12628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 18934837 - 18934902
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||  ||| ||||||||||||  ||||||||| ||||||||||| || ||||||||    
T  18934837 gattagtaacttccgggatgaaaattcaaatgacctatatttacagggacgaaatacctatttaag 18934902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 31108338 - 31108434
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||| |||||  | | || || ||||||||| |||| ||| ||||| |||||| | ||||||||||||||| |||| ||||||||||    
T  31108338 aaatgattaatatttacagggataaaatggaaagattagtaagttcatggatgaaaaatcaaat-gtctatatttgcagggatgaaatacatatttaa 31108434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 37945118 - 37945183
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| |||||||||||||| |   ||||||||||||||| |||| || ||||||||    
T  37945118 gattagtaacttcatggacgaaaattcaattgatctatatttgcagggatgaaagacctatttaag 37945183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12628340 - 12628392
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||| ||||||||||||||||  | |||||||||| ||||||||    
T  12628340 attagtaacttcagggacgaaaattcaaatcacttatatttgcatggacgaaa 12628392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 16118233 - 16118333
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||| ||||||||||  |||  | || || |||||||| ||| | |||||||||||||||  || |||||||||||||| |||| || |||||||    
T  16118233 tcaaatgatgaatatttgcaatggcgaaatggaaagattagtatctttagggacgaaaattcaaacggcttatatttgcagggatgaaagacctatttaa 16118332  T
Q  168 g 168  Q
    |    
T  16118333 g 16118333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 20072223 - 20072123
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | ||||||||||||||| |||| ||| ||||| |||||  ||||||| || ||| || ||||  |||||||||    
T  20072223 tcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagagatgaaaagcatatttaa 20072124  T
Q  168 g 168  Q
    |    
T  20072123 g 20072123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 31108000 - 31107933
Alignment:
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| |||| ||| ||||| |||||| ||||||| ||||||||| ||||  ||||||||||    
T  31108000 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 31107933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34404699 - 34404738
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctca 40  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  34404699 tgccacatgggcaccacgtcactaatgacatcccacctca 34404738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 22870462 - 22870560
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| ||| |||||||| | ||  |||||||||||  ||| ||| ||||| |||||| ||||||| || |||||| ||||  ||||||||||    
T  22870462 aaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaag 22870560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 39181159 - 39181054
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||  || |||| || |||||| ||||  |||||||||    
T  39181159 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcttataattacagggatgaaaagcatatttaa 39181060  T
Q  168 gtcttt 173  Q
    | ||||    
T  39181059 gccttt 39181054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 8654209 - 8654109
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || |||||||| || | ||  |||||||||||  ||| ||| ||||| ||||||  |||||| || |||||| |||| ||||||||||    
T  8654209 tcaaatgattagtaattgcagggacaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaa 8654110  T
Q  168 g 168  Q
    |    
T  8654109 g 8654109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 20072867 - 20072967
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||   |||||| || |||||| ||||  |||||||||    
T  20072867 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaagcatatttaa 20072966  T
Q  168 g 168  Q
    |    
T  20072967 g 20072967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 39181794 - 39181894
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||| || || |||||||| | || |||||||||||| |||| ||| ||||| |||||   |||||| || ||||||  ||| ||||||||||    
T  39181794 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggattaaaaacatatttaa 39181893  T
Q  168 g 168  Q
    |    
T  39181894 g 39181894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 94; Significance: 6e-46; HSPs: 3)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 859 - 980
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |||||| ||||||    
T  859 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacaggga 958  T
Q  152 cgaaacacatatttaagtcttt 173  Q
    ||||| ||||||||||| ||||    
T  959 cgaaagacatatttaagccttt 980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 762 - 595
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    |||||| |||| |||||||| ||||||||||||||| ||| |       ||||||||| |||||||||||||||||||||||||||||||||| | |||     
T  762 tgccacttgggtaccacgtcactaatgacagcccacttcagcaaaaaaacctaattagaaccaaaagtcaaatgattaatatttgcaggggcaaaatgag 663  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| |||| ||| ||||| ||||||  |||||| |||||| || ||||  ||||||||||    
T  662 aggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaag 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 853 - 788
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| |||| || ||||||||    
T  853 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 10443 - 10322
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  10443 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcaggga 10344  T
Q  152 cgaaacacatatttaagtcttt 173  Q
    ||||| || |||||||| ||||    
T  10343 cgaaagacctatttaagccttt 10322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 10450 - 10519
Alignment:
Q  104 attagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    |||||||||| || ||||||||||||||||  ||||||||||||| ||||| |  |||||||||| ||||    
T  10450 attagtaactccagggacgaaaattcaaatgacctatatttgcagagacgatagtcatatttaagccttt 10519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14062 - 13890
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||| |||||||| ||| ||||||||| |       | |||||||||||||||||||||||||||||||||||||||| || ||| |    
T  14062 tgccacatgggcaccacatcgctaataacaacccacctcagcaaaataacataattaggaccaaaagtcaaatgattaatatttgcaggggtaggttgga 13963  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtcttt 173  Q
    ||||||||||| || |  |||||||||||||||  ||||||||| ||| ||||||| ||||||||||| ||||    
T  13962 aggattagtaatttgagtgacgaaaattcaaattacctatatttacagagacgaaagacatatttaagccttt 13890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 14159 - 14240
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaat 133  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  || ||||||||||||    
T  14159 taattaggaccaaaagtcaaatgattaatatttgtaggggcagattggaaggattagtaacttcagtgatgaaaattcaaat 14240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 14153 - 14089
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||| ||||||||| ||||||||||||||||  |||||||||||||||| |||| || |||||||    
T  14153 gatttgtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11026 - 10855
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnnc----ctaattaggaccaaaagtcaaatgattaatatttgcaggggcagat 96  Q
    |||||||||||||||||||||||||||||||||||||||| |            |||||||||| ||||||||||||||||||||||||||  |||| |     
T  11026 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaaaaactaattaggatcaaaagtcaaatgattaatatttgcaatggcaaaa 10927  T
Q  97 tgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    || ||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  10926 tggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 10855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 11117 - 11052
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  11117 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 11052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 11139 - 11227
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    ||||||||||||||||||||  |||| | || ||| |||| |||||||||||||||||||||||||  ||||||||| |||||||||||    
T  11139 tcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaa 11227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 8535 - 8430
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||  || ||||||| || |||||||    
T  8535 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttaaagagacgaaagacctatttaa 8436  T
Q  168 gtcttt 173  Q
    ||||||    
T  8435 gtcttt 8430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 8699 - 8820
Alignment:
Q  53 aattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggac 152  Q
    ||||||||| |||||||||||||||||||||||||| | || |||| |||||||| |||||||  ||| | ||||||||||  ||||||||| |||||||    
T  8699 aattaggacaaaaagtcaaatgattaatatttgcagtgacaaattggaaggattaataacttcgcggatggaaattcaaatgacctatatttacagggac 8798  T
Q  153 gaaacacatatttaagtctttt 174  Q
    |||| || |||||||| |||||    
T  8799 gaaatacctatttaagcctttt 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8648 - 8688
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaa 41  Q
    |||||||||||| |||| || ||||||||||||||||||||    
T  8648 tgccacatgggctccacatcactaatgacagcccacctcaa 8688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 14450 - 14616
Alignment:
Q  1 tgccacatgggcaccacgtcgctaatgacagcccacctcaacnnnnnnncctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaa 100  Q
    ||||||||||||||||| ||| |||||||| ||||| ||| |       |||||||| |  ||||||| ||||||||||||||| ||| ||||||||  |    
T  14450 tgccacatgggcaccacatcgttaatgacaacccacgtcagcaaaaaa-cctaattatgttcaaaagttaaatgattaatatttacagtggcagatttga 14548  T
Q  101 aggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    |||||||||||||||||||||||||||||||||  ||||||||| |||||| |||  || ||||||||    
T  14549 aggattagtaacttcaaggacgaaaattcaaatgacctatatttacagggaggaaggacctatttaag 14616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 14337 - 14238
Alignment:
Q  68 tcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaa 167  Q
    |||||| |||||||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||| || |||||||    
T  14337 tcaaattattaatatttgcagtggcaaattggaaggattagtaacctcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 14238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 14359 - 14412
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaa 156  Q
    |||||||||||||||||| |||||||||||| |  |||||||||| ||||||||    
T  14359 gattagtaacttcaaggatgaaaattcaaatggtatatatttgcaaggacgaaa 14412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 261119 - 261003
Alignment:
Q  52 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcaggga 151  Q
    |||||||| | |||| |||||||||||||||||||||||||| | ||  ||||||||||| |||| ||| ||||| ||||||  |||||| |||||||||    
T  261119 taattaggtcgaaaattcaaatgattaatatttgcaggggcaaaatgggaggattagtaaattcatggatgaaaaatcaaatgacctataattgcaggga 261020  T
Q  152 cgaaacacatatttaag 168  Q
     ||||  ||||||||||    
T  261019 tgaaatgcatatttaag 261003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 262441 - 262545
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagt 169  Q
    |||||||||||||||||||||| | | ||  ||||||||||| |||| ||| ||||| ||||||  |||||| || |||||| ||||  ||||||||||     
T  262441 aaatgattaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaagc 262540  T
Q  170 ctttt 174  Q
    |||||    
T  262541 ctttt 262545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 120464 - 120580
Alignment:
Q  50 cctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagg 149  Q
    |||||||| ||||||||||||||||||||||||||| || | || | || |||||||| ||||||   ||||||||||| ||||  | |||||||||||     
T  120464 cctaattaagaccaaaagtcaaatgattaatatttgtagtgacaaaatggaaggattaataactt--gggacgaaaattgaaatgacatatatttgcaga 120561  T
Q  150 gacgaaacacatatttaag 168  Q
    ||||||| |||||||||||    
T  120562 gacgaaagacatatttaag 120580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 120323 - 120390
Alignment:
Q  103 gattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagtc 170  Q
    |||||||||||||| ||||||||||||||||| | ||||||||||||||||||| |  ||||||||||    
T  120323 gattagtaacttcatggacgaaaattcaaataacatatatttgcagggacgaaagatctatttaagtc 120390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 173
Target Start/End: Complemental strand, 12119 - 12016
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagt 169  Q
    ||||||||||||||| ||  |  ||||||||||||||| |||||||| |||| |||||| ||||   |||||||| ||| ||||||| |||||||||||     
T  12119 aaatgattaatatttacaatgaaagattgaaaggattactaacttcagggacaaaaatttaaatgatctatatttacagagacgaaaaacatatttaagc 12020  T
Q  170 cttt 173  Q
    ||||    
T  12019 cttt 12016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 13709 - 13611
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaag 168  Q
    ||||||||||| |||  ||||||| | || ||||||||||||  ||| ||| ||||| |||||| ||||||| ||||||||| ||||  ||||||||||    
T  13709 aaatgattaatttttataggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 13611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 14593 - 14697
Alignment:
Q  70 aaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatagcctatatttgcagggacgaaacacatatttaagt 169  Q
    ||||||||||| |||  ||||||| | ||  |||||||||||  ||| ||| ||||| |||||| ||||||| ||| ||| | ||||  |||||||||||    
T  14593 aaatgattaatttttataggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattgaaggaatgaaatgcatatttaagt 14692  T
Q  170 ctttt 174  Q
    |||||    
T  14693 ctttt 14697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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