View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13292_low_1 (Length: 1803)
Name: NF13292_low_1
Description: NF13292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13292_low_1 |
 | |
|
| [»] chr3 (21 HSPs) |
| |
|
| [»] scaffold0691 (1 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 1737; Significance: 0; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 1737; E-Value: 0
Query Start/End: Original strand, 19 - 1803
Target Start/End: Original strand, 2836442 - 2838226
Alignment:
| Q |
19 |
atggtgcgaatctcataatcatagtattttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2836442 |
atggtgcgaatctcataatcatagtattttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctg |
2836541 |
T |
|
| Q |
119 |
gttcaatgctgttaacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2836542 |
gttcaatgctgttaacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagg |
2836641 |
T |
|
| Q |
219 |
gatcttttccaatattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaat |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2836642 |
gatcttttccaatattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaat |
2836741 |
T |
|
| Q |
319 |
ttttgaaacccttcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacagagagcttcagcaaatttggcaagtttttcagtgactgca |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2836742 |
ttttgaaacccttcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacagagagcttcagcaaatttggcaagtttttcagtgactgca |
2836841 |
T |
|
| Q |
419 |
tcggatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatg |
518 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2836842 |
ttggatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatg |
2836941 |
T |
|
| Q |
519 |
aagccgcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatcttt |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2836942 |
aagccgcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatcttt |
2837041 |
T |
|
| Q |
619 |
tctactgttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatcta |
718 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837042 |
tctactgctgcacttaaggcattcccatgttctctttttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatcta |
2837141 |
T |
|
| Q |
719 |
ctcccccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacaga |
818 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837142 |
ctcccccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacaga |
2837241 |
T |
|
| Q |
819 |
atactttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaag |
918 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837242 |
atactttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaag |
2837341 |
T |
|
| Q |
919 |
tccaatgtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattcccca |
1018 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837342 |
tccaatgtctctaagttctgtaattcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattcccca |
2837441 |
T |
|
| Q |
1019 |
aatttttaggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatcc |
1118 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837442 |
aatttttaggaatatgattcaaagacgtaccctgaatgtcaagtaccttcaatatcctagagtgtgaacataatttaccaatgaaaggctccagcaatcc |
2837541 |
T |
|
| Q |
1119 |
accttttccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttggaattagaagcaattgataagcgtctagttattcca |
1218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837542 |
accttttccaaaaacatgaatagcacgaaaatgtgaattgtttgttctctgcaacgcattgttggaattagaagcaattgataagcgtctagttattcca |
2837641 |
T |
|
| Q |
1219 |
actgcaactgaatcaccttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttt |
1318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2837642 |
actgcaactgaatcaccttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgataacttcccgcaataaatcatggacttgacatgttt |
2837741 |
T |
|
| Q |
1319 |
taacttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctc |
1418 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837742 |
taactttcccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctc |
2837841 |
T |
|
| Q |
1419 |
atcagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggt |
1518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837842 |
atcagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggt |
2837941 |
T |
|
| Q |
1519 |
tttaaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactca |
1618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2837942 |
tttaaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactca |
2838041 |
T |
|
| Q |
1619 |
ctttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttcttt |
1718 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838042 |
cgttttgccattcaatcattgttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttcttt |
2838141 |
T |
|
| Q |
1719 |
tgacacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838142 |
tgacacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
2838226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 1278; E-Value: 0
Query Start/End: Original strand, 26 - 1803
Target Start/End: Original strand, 2853659 - 2855436
Alignment:
| Q |
26 |
gaatctcataatcatagtattttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggttcaat |
125 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2853659 |
gaatctcataatcatagaattttgggccaacccaacgacgaaagaaaacaagaggaacatgcttgataatccagtagctgtgtcctttgtctggttcaat |
2853758 |
T |
|
| Q |
126 |
gctgttaacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggatcttt |
225 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||| |||| || |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| |
|
|
| T |
2853759 |
gctgttaacaaatttatctggcatatcagataattcaaagattttgagtttatccaagtgtttgatgccagagggtacctccttcagttggaggatcttt |
2853858 |
T |
|
| Q |
226 |
tccaatattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaatttttgaa |
325 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||| || || ||||| |||||||||||||||||||| |
|
|
| T |
2853859 |
tccaatcttatatactcaagagaaatcaaagctcctttctctataagaatagaatttggtctattcaagtaactgagaatcagttctttcaatttttgaa |
2853958 |
T |
|
| Q |
326 |
acccttcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacagagagcttcagcaaatttggcaagtttttcagtgactgcatcggatc |
425 |
Q |
| |
|
| ||| |||||| |||||| ||||||||||| ||||| | || | || ||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
2853959 |
atcctccattttgaaaatgcaaaatttcaccatcgtaagcatcgtcccacacagatagcttcagtaaatttggcaagttttttagtgactgcattggatc |
2854058 |
T |
|
| Q |
426 |
atctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatgaagccgc |
525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| | ||| | | ||| | |||||| | | |||| |||||||||||||||||||| |
|
|
| T |
2854059 |
atctttcagcttggataaagccagctttatctcaacaagatactccaattttgggatccattcaggcaatgtatctagtttagctttcaaatgaagccgc |
2854158 |
T |
|
| Q |
526 |
ctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatcttttctactg |
625 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
2854159 |
ctaagttttggtggggttgacgcaaagtttaagtcaataatttcatcctctgctattgcagtgatattaagtgattcaaggtgttgcatctcttctactg |
2854258 |
T |
|
| Q |
626 |
ttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatctactccccc |
725 |
Q |
| |
|
||||||| ||| | |||||||||||| |||||||||||||||||||| | | ||| ||||||||||||| |||||||| ||| |||||||| ||||| |
|
|
| T |
2854259 |
cagcacttatggcctccccatgttctcttcttacatgccttaaacctaaccttcttaactgccttaacattttcatctcttgaatgagatctaccccccc |
2854358 |
T |
|
| Q |
726 |
atgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacagaatacttt |
825 |
Q |
| |
|
|||||| |||||||||||| | || |||||||||||||||||||||||||||||||| || | |||||| |||||||| ||||||| |||||||||| |
|
|
| T |
2854359 |
atgatcgacctccacataatataggttttgaagggaagtcaagtttttaataccttttttcaccaacacaccggttgtaaatcccaaaagagaatacttt |
2854458 |
T |
|
| Q |
826 |
gcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaagtccaatg |
925 |
Q |
| |
|
|||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2854459 |
gcatcataattattatggaaagcaagaaggtgccgtagctttgtaagcttgtttatttcacttggcatctcatgaacagatgtgtctcttaagtccaatg |
2854558 |
T |
|
| Q |
926 |
tctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaaattttt |
1025 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
2854559 |
tctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattcccaaaattatt |
2854658 |
T |
|
| Q |
1026 |
aggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatccacctttt |
1125 |
Q |
| |
|
|||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2854659 |
aggaatataattcaaagacgtaccttgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccaacaatccacctttt |
2854758 |
T |
|
| Q |
1126 |
ccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttggaattagaagcaattgataagcgtctagttattccaactgcaa |
1225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| ||||||| |||||||| ||||||||| || | |
|
|
| T |
2854759 |
ccaaaaacatgaatagcacgaaaatgtgaattgtttgctctcatcaacacattgttggaatgagaagctattgataggcgtctagatattccaacagcga |
2854858 |
T |
|
| Q |
1226 |
ctgaatcaccttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaacttt |
1325 |
Q |
| |
|
| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2854859 |
cagattcaccttcatgcacgaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaacttt |
2854958 |
T |
|
| Q |
1326 |
tccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagat |
1425 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2854959 |
cccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagat |
2855058 |
T |
|
| Q |
1426 |
ttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttttaaat |
1525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2855059 |
ttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttttaaat |
2855158 |
T |
|
| Q |
1526 |
agtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactcactttttg |
1625 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
2855159 |
agtacggcaggctgtcataactgagagataaaatctttgttagattggttaaatgggcattacgtcccaattccaatctcatattttcactcacgttttg |
2855258 |
T |
|
| Q |
1626 |
ccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttcttttgacaca |
1725 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
2855259 |
ccattcaatcattgttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcattttagaacaatttcttttgacaca |
2855358 |
T |
|
| Q |
1726 |
gccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2855359 |
gcctcaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
2855436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 779; E-Value: 0
Query Start/End: Original strand, 22 - 1803
Target Start/End: Complemental strand, 2751291 - 2749507
Alignment:
| Q |
22 |
gtgcgaatctcataatcatagtattttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggtt |
121 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| || |||||||| | | |||||| |||||| | |
|
|
| T |
2751291 |
gtgcgaacctcataatcatagtattttgggccaaaccattgacgaatgaacacaataggaacatggtttataatccaatggtcttgtcctccgtctggat |
2751192 |
T |
|
| Q |
122 |
caatgctgttaacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggat |
221 |
Q |
| |
|
||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||||| || | ||||| |||| ||||| |
|
|
| T |
2751191 |
caatgctcttaacaaattcatctggcatatcaactaagtcaatgactttgagcttatccaagtgtttgatgccagaaggcacatcctttagtttggggat |
2751092 |
T |
|
| Q |
222 |
cttttccaatattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaatttt |
321 |
Q |
| |
|
| |||||||| | | || |||||||| | |||||||||||||||||||||||| ||||| ||||||||| ||||| ||||| ||||||||||||| || |
|
|
| T |
2751091 |
cctttccaatttaagattttcaagagagagcaaagctcctttctctataaggatagaatttggtctattcaagtgactgagaatcagttctttcaatatt |
2750992 |
T |
|
| Q |
322 |
tgaaacccttcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacaga--gagcttcagcaaatttggcaagtttttcagtgactgcat |
419 |
Q |
| |
|
||||| ||| |||||| |||||| ||||||||||| || ||| ||| | |||||| | ||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
2750991 |
tgaaatcctccattttgaaaatgcaaaatttcaccatcaaaggcattct--ccaacaaattgagcttcagaagatttggcaaatttttcagtgactgcaa |
2750894 |
T |
|
| Q |
420 |
cggatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatga |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||| ||||| ||| | || ||||| ||| ||||||| |||||||||||||||||| |
|
|
| T |
2750893 |
cggatcatctttcagcttggataaagccagacaaatctgaacaagacactcaaattttggaatccaatcaggaaacttctctagtctagctttcaaatgg |
2750794 |
T |
|
| Q |
520 |
agccgcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatctttt |
619 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
2750793 |
agccgttgaagttttggtggggttgacgcaaagtttaagtcaataatttcatcctcttctattgcagtgatattaagtgattcaaggtgttgcatctctt |
2750694 |
T |
|
| Q |
620 |
ctactgttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatctac |
719 |
Q |
| |
|
||||| ||||||| ||||||||||||||| || |||||||| ||||||||||||||| ||| ||||||| ||||| |||||||||||| |||||||| |
|
|
| T |
2750693 |
gtactgcagcacttatggcattcccatgttcccttcttacatgctttaaacctaacttccttaactgccttagcattttcatctcttcaatgagatctac |
2750594 |
T |
|
| Q |
720 |
tcccccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacagaa |
819 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||| |||||| ||| ||||||||||||||| | ||| |||| ||||||||| |||||||| ||||| |
|
|
| T |
2750593 |
tcccccatgatctacctccacataataaaggttttttagggaaatcatgtttttaatacctttttcaatcagcacgccagttgtagagcccaaagcagaa |
2750494 |
T |
|
| Q |
820 |
tactttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaagt |
919 |
Q |
| |
|
|| ||| |||||||| ||||| |||||||| || || |||| |||||| |||||||||||||||| || |||||||| || ||||||||||||| | |
|
|
| T |
2750493 |
tatttttgttcatagttgcgatgaaaagcaagcagatgccgtaactttgtcagcttgtttatttcactaggtatctcatgcactagtgtttctcttaaat |
2750394 |
T |
|
| Q |
920 |
ccaatgtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaa |
1019 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| |
|
|
| T |
2750393 |
ccaatgtctctaagttatgtaactcaccaatagatttaggaagagcctttacatttgtattccttaggttaatgtaccgcaagtgaaaaagattccccaa |
2750294 |
T |
|
| Q |
1020 |
atttttaggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatcca |
1119 |
Q |
| |
|
||||||||| |||||| |||| ||||| || ||||||||||| |||||||| || || ||||| ||||| | |||||| |||||| |||||| ||||| |
|
|
| T |
2750293 |
atttttagggatatgattcaacgacgtcccttgaatgtcaaggaccttcaaaattcttgactgcgaacaaactttacccatgaaatgctccaatgatcca |
2750194 |
T |
|
| Q |
1120 |
ccttttccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttggaattagaagcaattgataagcgtctagttattccaa |
1219 |
Q |
| |
|
||| | |||| |||| |||||| ||||| ||| |||| || || ||| | ||||||||||||| ||||| || || |||| |||||||||| |||||| |
|
|
| T |
2750193 |
tcttcttcaaacacataaatagcccgaaattgtaaattattagtgctcctgaacacattgttgggattagtggctatagataggcgtctagttcttccaa |
2750094 |
T |
|
| Q |
1220 |
ctgcaactgaatcac---cttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgt |
1316 |
Q |
| |
|
||||||||| |||| ||||||||| |||||| |||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
2750093 |
gtgcaactgattcactatcttcatgcatgcaatgaccgaaatttaaatccttcatttttctaatgatcaattcccgcattaaatcatggacttgacatgt |
2749994 |
T |
|
| Q |
1317 |
tttaacttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctc |
1416 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||| || || || |||||||| |||||||||| |
|
|
| T |
2749993 |
ttgaacttttccttcaaagccaacatttgagacctgaaccaaacttctctgaatcaattcagacaagtactcttctgcaacttgctctggagttcttctc |
2749894 |
T |
|
| Q |
1417 |
tcatcagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatg |
1516 |
Q |
| |
|
|| || |||| |||||||| |||||||||||||| | ||||| ||||||||||||||| | || |||||||| |||| |||||||||||||||||||| |
|
|
| T |
2749893 |
tcttccaattttacaaacccttcagctatccattgtcgagttaatctcctatgattaattgcatagtcctctgggtataaaccaaaatacaaaatgcatg |
2749794 |
T |
|
| Q |
1517 |
gttttaaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcact |
1616 |
Q |
| |
|
|||| || || || || || | |||||||| || |||| ||||||| ||||| |||||||||||||||||||| |||||||| |||| ||||||||| |
|
|
| T |
2749793 |
gtttcaagtaataaggaagtccatcataactaagtgatagaatctttactagacacgttaaatgggcattacgtcctaattccagactcagattttcact |
2749694 |
T |
|
| Q |
1617 |
cactttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttct |
1716 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
2749693 |
caccttttgccattcaatcattgttttagattttgttgaaagtaaaccaccaatagctacaattgctagaggtagctgcctgcacttttgaacaatttct |
2749594 |
T |
|
| Q |
1717 |
tttgacacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
||||||||||||| ||| |||| ||||||||| |||||| | ||| ||||||||||| |||| ||||| |||||||||||||||||| |
|
|
| T |
2749593 |
tttgacacagcctcaagttctgatggacaatgtccaccaagctcatatctaaatactctcttgcagaaaagttcccatgctttgttt |
2749507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 691; E-Value: 0
Query Start/End: Original strand, 26 - 1803
Target Start/End: Complemental strand, 5415177 - 5413398
Alignment:
| Q |
26 |
gaatctcataatcatagtattttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggttcaat |
125 |
Q |
| |
|
|||||| ||||||| |||||||||| |||| ||| |||||| || ||| ||||||||| |||||||||||| | | ||||||||||||||| ||||| |
|
|
| T |
5415177 |
gaatctgataatcaaagtattttggaccaatccagtgacgatttaatacaagaggaacattcttgataatccaattgtcgtgtcctttgtctggatcaat |
5415078 |
T |
|
| Q |
126 |
gctgttaacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggatcttt |
225 |
Q |
| |
|
||| ||||||||||||||| ||||||| |||||| | ||||||||||||||||||| || | ||||||||||| || |||||| || |||||| |
|
|
| T |
5415077 |
gctcgtaacaaattcatctggcatatcaactaagtcgaagactttgagtttatccaagaattggatgccagagggtaccttcttcaggcagggaatcttt |
5414978 |
T |
|
| Q |
226 |
tccaatattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaatttttgaa |
325 |
Q |
| |
|
|||| | ||| | | |||||||| | |||||||||||||||||||||||| |||||| || ||||| |||| ||||| |||||||||||||| | || |
|
|
| T |
5414977 |
tccattcttagacgttcaagagagagcaaagctcctttctctataaggatagaatttactcgattcatatgactgagaaatagttctttcaatttcttaa |
5414878 |
T |
|
| Q |
326 |
acccttcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacaga--gagcttcagcaaatttggcaagtttttcagtgactgcatcgga |
423 |
Q |
| |
|
| ||| |||||| |||||| |||| |||||| || |||| ||| | |||||| | ||||||||| | |||||| |||||||||||||| |||| ||| |
|
|
| T |
5414877 |
atcctccattttgaaaatgcaaaaattcaccatcataggcattct--ccaacaaattgagcttcagaagatttggtaagtttttcagtgatggcatagga |
5414780 |
T |
|
| Q |
424 |
tcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatgaagcc |
523 |
Q |
| |
|
|||||| ||||||||||||| |||| | |||||| |||||||| |||| || |||| ||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5414779 |
tcatctgtcagcttggataacgccatcattatctgaacaagacattcaaactttgaaatccaatcaggcaacttctctagtctagctttcaaatgaagcc |
5414680 |
T |
|
| Q |
524 |
gcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatcttttctac |
623 |
Q |
| |
|
| | ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | |||| |
|
|
| T |
5414679 |
gacgaagttttggcggggttgacacaaagtttaagtcaataatttcatcctcggctattgcagtgatattaagtgattcaaggtattgcatctctactac |
5414580 |
T |
|
| Q |
624 |
tgttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatctactccc |
723 |
Q |
| |
|
|| |||||| ||||||||| |||||||| |||||||| ||||||| ||||||| ||| ||| | | ||| | |||||||||||| ||||| |||||| |
|
|
| T |
5414579 |
tgccacacttatggcattcccgtgttctcttcttacatgctttaaacccaacttccttaactgcttaagcatcttcatctcttcaatgagatccactccc |
5414480 |
T |
|
| Q |
724 |
ccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacagaatact |
823 |
Q |
| |
|
||||||||||||| ||||||| ||| ||||| |||||||||| ||||||||||||||| ||||| ||||||||||||| |||| | | ||||||| | |
|
|
| T |
5414479 |
ccatgatctacctgcacataataaaaattttgtagggaagtcatgtttttaatacctttttccatcagcacaccagttgtcgagcctagagcagaatatt |
5414380 |
T |
|
| Q |
824 |
ttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaagtccaa |
923 |
Q |
| |
|
|| | ||| |||||||||||||||||||||| || |||| ||| | |||||||||||||||| ||| |||||||| ||| ||||||||||||| ||||| |
|
|
| T |
5414379 |
tttcttcaaagttacgatggaaagcaagaagatgccgtaaatttttcagcttgtttatttcacttggtatctcatgcacaagtgtttctcttaaatccaa |
5414280 |
T |
|
| Q |
924 |
tgtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaaattt |
1023 |
Q |
| |
|
|||||||||||| | || |||| | |||||||||||||||||||||||| |||||||||||||| | |||||| |||||||||||||||||||| ||| |
|
|
| T |
5414279 |
tgtctctaagttatacagctcactac-agatttaggaagaacctttactttcgtattccttaggttaatgtacctcaagtgaaaaagattccccaagttt |
5414181 |
T |
|
| Q |
1024 |
ttaggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatccacctt |
1123 |
Q |
| |
|
||||| |||||| |||| | ||||| ||||||||||| ||||||| |||| |||| ||||||| | | |||| |||||| ||||| | ||||||||| |
|
|
| T |
5414180 |
ttagggatatgattcaacaatgtaccttgaatgtcaagaaccttcagaatccgagaccgtgaacaaagtatacctatgaaatgctccggagatccacctt |
5414081 |
T |
|
| Q |
1124 |
ttccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttggaattagaagcaattgataagcgtctagttattccaactgc |
1223 |
Q |
| |
|
|| |||| |||||||||||||||||||||| ||| | || ||| | | |||||||| | | ||| || || |||| |||||||||| ||||||| | |
|
|
| T |
5414080 |
tttcaaacacatgaatagcacgaaaatgtggattaatagtgctccttagtacattgtttggactagtggctatagataggcgtctagtttttccaaccac |
5413981 |
T |
|
| Q |
1224 |
aactgaatcac---cttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtttta |
1320 |
Q |
| |
|
||||| |||| ||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| | |
|
|
| T |
5413980 |
gactgattcactatcttgttgcacactatgaccgaaacttaaatccttcatttttctaatgatcacttcccgcagtaaatcatgtacttgacatgtttga |
5413881 |
T |
|
| Q |
1321 |
acttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcat |
1420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| || ||||||||| |||||||||||| | |
|
|
| T |
5413880 |
acttttccttcaaagccaacatttgagacctgaaccagacttctttgaatcaattcagacaagtattcctctgcaacttgctccggagttcttctctctt |
5413781 |
T |
|
| Q |
1421 |
cagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttt |
1520 |
Q |
| |
|
||| |||||||| |||||||||||||| | ||||| ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
5413780 |
gcaattgaacaaacccttcagctatccattgtcgagttaatctcctatgattaataacatagtcctctggatataaaccaaaatacaaaatgcatggttt |
5413681 |
T |
|
| Q |
1521 |
taaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactcact |
1620 |
Q |
| |
|
|| ||||| || |||| || ||||| || || | ||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||| |||||| |
|
|
| T |
5413680 |
caagtagtaaggaaggccatcgtaactaagtgacagaatctttgttagactcgttaaatgggcattacgtcctaattccaggctcagattttgactcacc |
5413581 |
T |
|
| Q |
1621 |
ttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttcttttg |
1720 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||| | |
|
|
| T |
5413580 |
ttttgccattcaataattgttttagattttgttgaaagtagaccaccaatggctacaatttctagaggaagctgcttgcattttcgaacaatttctttcg |
5413481 |
T |
|
| Q |
1721 |
acacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
| ||| ||| |||||| | |||||||| ||||||| ||||||||| ||| || ||||| ||| | |||||||||||||||||| |
|
|
| T |
5413480 |
atacatcctgaagctccgatggacaattcccaccaagttcaaatccaaacaccttcttgcagtaaagttcccatgctttgttt |
5413398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 595; E-Value: 0
Query Start/End: Original strand, 22 - 1803
Target Start/End: Complemental strand, 2809563 - 2807779
Alignment:
| Q |
22 |
gtgcgaatctcataatcatagtattttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggtt |
121 |
Q |
| |
|
|||||||| |||||||| || ||||||||||| | | ||| ||| | | ||| |||||||||||||||| |||| |||| | |||||||||||| | |
|
|
| T |
2809563 |
gtgcgaatggcataatcaaagaattttgggccactcgagtgatgaatggatacaagaggaacatgcttgattatccggtagtcttttcctttgtctggat |
2809464 |
T |
|
| Q |
122 |
caatgctgttaacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggat |
221 |
Q |
| |
|
||| ||| | |||||||||| ||| ||| |||| |||| ||| ||||||||||||||||| | || ||| ||||||| ||||||||| || || || |
|
|
| T |
2809463 |
caacgctttcaacaaattcagctggcatttcagtgaagttaatagctttgagtttatccaaggatctgatgcctgagggtacctccttcagctggggtat |
2809364 |
T |
|
| Q |
222 |
cttttccaatattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaatttt |
321 |
Q |
| |
|
| |||| | | || |||||||| ||||||| ||||| |||||||||| || || |||||||| | ||| |||| | |||| |||||||| |
|
|
| T |
2809363 |
tctgtccatggtaagatattcaagagagatcaaagttccttcgtctataaggacagtatgtactctattcaagcgactgagatctagtttcctcaatttt |
2809264 |
T |
|
| Q |
322 |
tgaaacccttcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacagagagcttcagcaaatttggcaagtttttcagtgactgcatcg |
421 |
Q |
| |
|
|||||| |||| | |||||| ||||||||||| || |||| || | || | | || |||| ||||| ||||||||||||||||||||| | | |
|
|
| T |
2809263 |
aaaaacccgccattctgaaaatgtaaaatttcaccatcataggcgttgtcccatagaccgaatttcaacaaatatggcaagtttttcagtgactgtaatg |
2809164 |
T |
|
| Q |
422 |
gatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatgaag |
521 |
Q |
| |
|
|||||| ||||| || ||||||||||||||||||||||||||| ||| ||||| | | ||| | |||||| | |||| |||||||||||||||| |
|
|
| T |
2809163 |
gatcatttttcaactgagataaagccagctttatctcaacaagatactccagttttgggatccattcaggcaatgaatctagtttagctttcaaatgaag |
2809064 |
T |
|
| Q |
522 |
ccgcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatcttttct |
621 |
Q |
| |
|
|| | ||| | ||||| | || || |||||||||| ||| ||||||| || | ||||| |||||||||||| ||||||||| | ||| | | || |
|
|
| T |
2809063 |
tcgtcgaagctggggtggagacgagacgaagttcaagttaattgtttcatcttcacctattgtagtgatattaagattttcaaggtgtttcatttctact |
2808964 |
T |
|
| Q |
622 |
actgttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatctactc |
721 |
Q |
| |
|
| || |||| ||||||||||||||||||||| | |||||||||||||||||| ||| ||| |||| |||||||| |||||||| ||| |||||||| | |
|
|
| T |
2808963 |
attgcagcacataaggcattcccatgttctcttctcacatgccttaaacctaacctccttaactgccctaacattttcatctcttgaatgagatctaccc |
2808864 |
T |
|
| Q |
722 |
ccccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacagaata |
821 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| |||| |||||| |
|
|
| T |
2808863 |
ccccatgatctacctccacataataaaggttttgaagggaagtcaagtttttaatacctttttccacgaacacacccgttgtaaagcctaaaagagaata |
2808764 |
T |
|
| Q |
822 |
ctttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaagtcc |
921 |
Q |
| |
|
|||| | || |||||||| ||||||||||||||||| | ||||||| |||||||||||||||||| ||| |||||| | ||| |||| || ||||| ||| |
|
|
| T |
2808763 |
cttttcttcgtagttacggtggaaagcaagaaggtgccttagctttttgagcttgtttatttcacttggtatctcacgcacaagtgtgtcccttaaatcc |
2808664 |
T |
|
| Q |
922 |
aatgtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaaat |
1021 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2808663 |
aatgtctctaagttctgcagttcaccaacagatttaggaagagcctgtatttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaaat |
2808564 |
T |
|
| Q |
1022 |
ttttaggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatccacc |
1121 |
Q |
| |
|
|||||||||||||| ||| || ||||| |||||||||| ||||||||| || ||||||| |||||| | ||| | |||| | |||||| | | |||| |
|
|
| T |
2808563 |
ttttaggaatatgatgcaaggatgtaccttgaatgtcaaataccttcaaaatactagactttgaacaaagcttatccatgatatgctccaacggttcacc |
2808464 |
T |
|
| Q |
1122 |
ttttccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttggaattagaagcaattgataagcgtctagttattccaact |
1221 |
Q |
| |
|
|||| | ||||||||||||||||| |||||||||||||| | |||||| ||||||| || | ||| | || |||| ||||||||| ||||||| |
|
|
| T |
2808463 |
tttttcgaaaacatgaatagcacggaaatgtgaattgttagcgctcttctgaacattgtcgggagtagtgactatagatagacgtctagtttttccaacc |
2808364 |
T |
|
| Q |
1222 |
gcaactgaatc---accttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttt |
1318 |
Q |
| |
|
|| | ||| || | ||||| ||||| ||||||| |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
2808363 |
gcgattgattcgttatcttcacgcacagaatgacaaaaacttaaatccttcattttcctaatgatcacttgccgcaataaatcatggacttgacatattt |
2808264 |
T |
|
| Q |
1319 |
taacttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctc |
1418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| || | ||||| |||||||||||| |
|
|
| T |
2808263 |
gaacttttccttcaaagccaacatttgagacctgaaccagacttctgtgaatcaattcatacaagtattcctctgctatatgctctggagttcttctctc |
2808164 |
T |
|
| Q |
1419 |
atcagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggt |
1518 |
Q |
| |
|
||| ||||| |||||||| |||||||||||||| | ||||| |||| |||||||||| ||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2808163 |
atctgatttaacaaacccttcagctatccattgtcgagttaatctcttatgattaatagagtagtcctctggatatataccaaaatacaaaatgcagggt |
2808064 |
T |
|
| Q |
1519 |
tttaaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactca |
1618 |
Q |
| |
|
|| || ||||| |||| || || ||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||||| ||||| |
|
|
| T |
2808063 |
ttcaagtagtagggcaagccatcgtaactcagtgataaaatctttgttagacttgttaaatgggcattacgtcccaactccaagctcagattttgactca |
2807964 |
T |
|
| Q |
1619 |
ctttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttcttt |
1718 |
Q |
| |
|
| |||| |||||| || || |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||| ||| | |
|
|
| T |
2807963 |
ccttttcccattccattattgttttatattttgttgaaagtagaccgccaatagctacaattgccaaaggtagctgcttgcattttcgaacaatatctat |
2807864 |
T |
|
| Q |
1719 |
tgacacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
||||| ||||| |||||| |||||||| |||||| || | || ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2807863 |
tgacatagcctcaagctccggtggacagtgcccatcaagatcgaatctaaatactttcttgcagaagagttcccatgctttgttt |
2807779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 567; E-Value: 0
Query Start/End: Original strand, 31 - 1803
Target Start/End: Complemental strand, 2799648 - 2797873
Alignment:
| Q |
31 |
tcataatcatagtattttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggttcaatgctgt |
130 |
Q |
| |
|
||||||||||| | ||||||||| |||| ||||||| ||| ||| ||||||||||||||||||| ||||| | |||||||||||||| |||||||| | |
|
|
| T |
2799648 |
tcataatcatataagtttgggccataccagtgacgaatgaatacaagaggaacatgcttgataattgagtagttctgtcctttgtctggatcaatgcttt |
2799549 |
T |
|
| Q |
131 |
taacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggatcttttccaa |
230 |
Q |
| |
|
|||||||| | ||| |||||||| |||| ||| |||||||||||| || ||| || |||| ||||| ||||||||| || ||||| ||||||| |
|
|
| T |
2799548 |
caacaaattgagctggcatatcagtgaagtaaatatctttgagtttatgcatgtgctttatgccaatgggtacctccttcagctgggggattttttccag |
2799449 |
T |
|
| Q |
231 |
tattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaatttttgaaaccct |
330 |
Q |
| |
|
| | | ||| |||||||| | ||||| ||| ||||| |||| ||| |||||| |||||||| ||| || || |||| ||||||||| |||||||| |
|
|
| T |
2799448 |
tgtaagatgttcaagagatagcaaagttccattctcaataatgatggaatttattctattcaagtgtcgaaggttcagtgtgttcaattttagaaaccct |
2799349 |
T |
|
| Q |
331 |
tcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacagagagcttcagcaaatttggcaagtttttcagtgactgcatcggatcatctt |
430 |
Q |
| |
|
||||| |||||| ||||||||||| || ||| ||| | || | | |||| || || | ||| || ||||||| ||||||||||| ||||||| || |
|
|
| T |
2799348 |
ccatttcgaaaatgaaaaatttcaccatcatagcaattgtcccacaaacagagattgagaagattcggtaagttttgcagtgactgcaatggatcatatt |
2799249 |
T |
|
| Q |
431 |
tcagcttggataaagc-cagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatgaagccgcctaa |
529 |
Q |
| |
|
||| | | || ||||| |||||||| || ||| |||| ||||||||| | || ||||| |||||||||||||||||| |||||||||| |||||| || |
|
|
| T |
2799248 |
tcaacataga-aaagctcagctttaccttaacgagacactcaagttttgcaatccaatcgggcaacttctgtagtctacctttcaaatgtagccgctgaa |
2799150 |
T |
|
| Q |
530 |
gttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatcttttctactgttgc |
629 |
Q |
| |
|
||| ||||||| ||| | |||||||| |||||||||||||||||| ||||| | | |||||| || ||||||||| ||| | | |||| | || |
|
|
| T |
2799149 |
gttggggtggggatgatataaagttcaggtcaataatttcatcctccgatattactgagatattcagattttcaaggtgtgtcatttctgctacagcagc |
2799050 |
T |
|
| Q |
630 |
acttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatctactcccccatga |
729 |
Q |
| |
|
|||||||| |||||||||||||| | ||||||||||||||| | ||| ||| | ||||| ||||| ||| |||| ||| ||||| || || |||||| |
|
|
| T |
2799049 |
acttaaggaattcccatgttctcctctgacatgccttaaacctgaactccttaaattccttagcattttcatttcttgaatgagatcaacccctccatga |
2798950 |
T |
|
| Q |
730 |
tctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacagaatactttgcat |
829 |
Q |
| |
|
||||||||||||||| |||| ||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || | |
|
|
| T |
2798949 |
tctacctccacataataaagattttgtagggaaatcaagtttttaatacctttttccatcaacacaccagttgtaaagcccaaaagagaatactccgctt |
2798850 |
T |
|
| Q |
830 |
catagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaagtccaatgtctc |
929 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||||| ||| |||| | ||| || ||||||||||| |
|
|
| T |
2798849 |
catagttacgatggaaagcaagaaggtgccgtagctttgtgagcttgtttatttcacttggtatttcatgcacaagtgtgtttctcaaatccaatgtctc |
2798750 |
T |
|
| Q |
930 |
taagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaaatttttagga |
1029 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||| || ||| || |||| |||||||||| |||||||| |||| ||||| || |||||||||||||| |
|
|
| T |
2798749 |
taagttctgtagttcaccaacagatttcggaagagtctgtacattagtataacttaggtttatgtaccttatgtgacaaagactcaccaaatttttagga |
2798650 |
T |
|
| Q |
1030 |
atatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatccaccttttccaa |
1129 |
Q |
| |
|
|||| |||| || ||||| ||||||||||| |||||||||||||||||||||||||| | |||||| || ||| |||||| || || ||||| ||| |
|
|
| T |
2798649 |
atatttttcaatgatgtaccttgaatgtcaagcaccttcaatatcctagactgtgaacacagtttacccatcaaatgctccaatgattcatctttttcaa |
2798550 |
T |
|
| Q |
1130 |
aaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttggaattagaagcaattgataagcgtctagttattccaactgcaactga |
1229 |
Q |
| |
|
|||||||||| ||||||||||| | |||||| || ||||||||||||||||| | | | ||||| |||| |||||||||| | |||||||| | ||| |
|
|
| T |
2798549 |
aaacatgaattgcacgaaaatgcgtattgttagtgctcttcaacacattgtttggacaactggcaatagataggcgtctagttttcccaactgcgattga |
2798450 |
T |
|
| Q |
1230 |
atcac---cttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaactttt |
1326 |
Q |
| |
|
|||| ||| ||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| |||||| |
|
|
| T |
2798449 |
ttcactatcttgatgcacacaatgacagaatcttaaatccttcatttttctaatgagcacttcccggaataaatcatggactcggcatgtttgaactttc |
2798350 |
T |
|
| Q |
1327 |
ccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagatt |
1426 |
Q |
| |
|
|||||||| ||||||||||||||||||| || |||||||||||| | ||| ||||| || || || || ||| ||| ||||| |||||||||||||| |
|
|
| T |
2798349 |
ccttcaaatccaacatttgagacctgaaccatacttctgtgaattagttcagacaaatactcttctgcaactatctcttgagttcgtctctcatcagatt |
2798250 |
T |
|
| Q |
1427 |
tgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttttaaata |
1526 |
Q |
| |
|
| |||||||| |||||||||||||| | ||||| |||| ||||||| || || || |||| ||||||||| |||||||||||||||||||||| || || |
|
|
| T |
2798249 |
taacaaacccttcagctatccattgtcgagttaatctcttatgattgatagaatagtcctgaggatatatagcaaaatacaaaatgcatggtttcaagta |
2798150 |
T |
|
| Q |
1527 |
gtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactcactttttgc |
1626 |
Q |
| |
|
| || ||||| || ||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||| ||||| |||||| ||| | |
|
|
| T |
2798149 |
aaaaggaaggctatcgtaactaagagataaaatctttgtaagactagttaaatgggcattgcgtcccaactccaggttcagattttgactcaccattttc |
2798050 |
T |
|
| Q |
1627 |
cattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttcttttgacacag |
1726 |
Q |
| |
|
|||||| ||| ||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||| | |
|
|
| T |
2798049 |
cattcagtcacagttttagcttttgtcgaaaatagaccaccaatggctacaattgccaggggtagctgcttgcattttcgaactatttctattgacatgg |
2797950 |
T |
|
| Q |
1727 |
ccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||| ||||||| |
|
|
| T |
2797949 |
agttaagctctggtggacaatgcccaccaacctcaaatctgaatgctttcttgcagaagagttcccatgatttgttt |
2797873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 61 - 1802
Target Start/End: Complemental strand, 2771317 - 2769582
Alignment:
| Q |
61 |
tgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggttcaatgctgttaacaaattcatctgacatatcagataagt |
160 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| | |||||||||| ||| |||||||| | || |
|
|
| T |
2771317 |
tgacgaatgaatacaagaggaacatgcttgataatcgagtagtcttgccctttatctggatcaatgctttcaacaaattcagctggcatatcagtgatgt |
2771218 |
T |
|
| Q |
161 |
caatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggatcttttccaatattatatgctcaagagaaatcaaagctcc |
260 |
Q |
| |
|
||| |||||||||||| || | ||||| |||| |||||| |||||||||||| ||||| ||||||| | | | ||| |||||||| | |||| ||| |
|
|
| T |
2771217 |
gaatatctttgagtttatgcatgagtttgatgccaaagggtacctccttcagttgggggattttttccagtgtaagatgttcaagagagagcaaatttcc |
2771118 |
T |
|
| Q |
261 |
tttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaatttttgaaacccttcattttcaaaatggaaaatttcaccctcg |
360 |
Q |
| |
|
| || |||| || | || | | |||||| | ||||||| |||| |||||||| |||||||| |||||| |||||| ||||||||||| || |
|
|
| T |
2771117 |
atggtcaataacaatggagttaactttattcaagcaacggagattcagtgtcatcaattttagaaaccctccattttgaaaatgaaaaatttcaccatca |
2771018 |
T |
|
| Q |
361 |
taggtattatgcccaacagagagcttcagcaaatttggcaagtttttcagtgactgcatcggatcatctttcagcttggataaagccagctttatctcaa |
460 |
Q |
| |
|
||| ||| | || | | | || ||| || ||| |||| ||||||||||||||||| |||| |||||||| | | || ||| ||| ||| || || |
|
|
| T |
2771017 |
tagcaattgtcccacaaacaaagactcaccagattcggcatgtttttcagtgactgcagtggattatctttcaacatagaaaaactcagtcttaccttaa |
2770918 |
T |
|
| Q |
461 |
caagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatgaagccgcctaagttttggtggggttgacacaaagttcaagtc |
560 |
Q |
| |
|
|||| | |||||||| | || ||||| |||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||| | | |||||||||| |
|
|
| T |
2770917 |
caaggcactcaagttctggaatccaatcaggcaacttctgtagtctagctttcaaatgtagccgcagaagttggggtggggatgatatacagttcaagtc |
2770818 |
T |
|
| Q |
561 |
aataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatcttttctactgttgcacttaaggcattcccatgttctctctttaca |
660 |
Q |
| |
|
|| ||||||||||| |||||||| ||||||||| ||||||||| | ||| | | |||||| |||| |||||| ||||||||||||| |||| |
|
|
| T |
2770817 |
aagtatttcatcctcagatattgcacagatattaagatgttcaaggtgtttcatttctgctactgcagcacataaggcgttcccatgttctcgtcttact |
2770718 |
T |
|
| Q |
661 |
tgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatctactcccccatgatctacctccacataacaaagtttttgaaggg |
760 |
Q |
| |
|
||||||| |||||| ||| ||| ||||||| ||||| |||||||| ||| |||| ||| |||||||||||||||||||||| | |||| ||||| |||| |
|
|
| T |
2770717 |
cgccttaagcctaacctccttaactgccttagcattttcatctcttgaatgagatatacgcccccatgatctacctccacatcataaagattttgtaggg |
2770618 |
T |
|
| Q |
761 |
aagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacagaatactttgcatcatagttacgatggaaagcaagaaggtgtcg |
860 |
Q |
| |
|
|||||| ||||||||||||||| ||||| | |||||||||| |||||||| |||||| ||| | || ||||||| |||| || ||||||||| ||| |
|
|
| T |
2770617 |
aagtcatgtttttaatacctttttgcatcctcccaccagttgt---gcccaaaagagaataatttccttcgtagttactatggcaaacaagaaggtttcg |
2770521 |
T |
|
| Q |
861 |
tagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaagtccaatgtctctaagttctgtagttcaccaatagatttagga |
960 |
Q |
| |
|
||||||| | |||||||||||| ||| | ||||| ||| ||||||||||||| || ||||||||||| |||| ||| ||||||| |||||||||| |
|
|
| T |
2770520 |
tagcttttccaatttgtttatttcatgtggtagttcatgcacaagtgtttctcttaaatctaatgtctctaaattctttagctcaccaacagatttagga |
2770421 |
T |
|
| Q |
961 |
agaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaaatttttaggaatatgaatcaaagacgtaccctgaatgtcaa |
1060 |
Q |
| |
|
||| || ||| || |||| |||||||||| ||||||||||||||||||| | ||||||||||||||||||||| |||| || ||||| |||||||||| |
|
|
| T |
2770420 |
agagtctgtacattagtataacttaggtttatgtaccttaagtgaaaaagacttcccaaatttttaggaatatgattcaacgatgtaccttgaatgtcaa |
2770321 |
T |
|
| Q |
1061 |
gtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatccaccttttccaaaaacatgaatagcacgaaaatgtgaattgtt |
1160 |
Q |
| |
|
|||||||||| || |||| ||||||||| | |||| | || ||| ||||| | |||||||||| | ||||||||||||||| |||||||||||||||| |
|
|
| T |
2770320 |
gtaccttcaaaatgctaggctgtgaacacagtttatccatcaaattctccatcggtccacctttttcgaaaacatgaatagcatgaaaatgtgaattgtt |
2770221 |
T |
|
| Q |
1161 |
tgttctcttcaacacattgttggaattagaagcaattgataagcgtctagttattccaactgcaactgaatcac---cttcatgcacaaaatgacagaaa |
1257 |
Q |
| |
|
|| |||||||||||||||||| | ||| || || |||| ||||||||| ||||||| || | ||| |||| | ||||||||| ||||||||||| |
|
|
| T |
2770220 |
agtactcttcaacacattgttgagactagtggctatggataggcgtctagtgtttccaaccgcgattgattcactatcatcatgcacacaatgacagaaa |
2770121 |
T |
|
| Q |
1258 |
cttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaacttttccttcaaagccaacatttgagacctgaatca |
1357 |
Q |
| |
|
||||| | |||||||||| |||||| |||||| | ||||||||||||||||||||||||| || ||| |||| ||||| ||||||| |||| | |
|
|
| T |
2770120 |
cttaagtccttcatttttttaatgaaaacttcctggaataaatcatggacttgacatgtttgaattttccctt------caacaattgagacttgaacta |
2770027 |
T |
|
| Q |
1358 |
gacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagatttgacaaacccctcagctatccattgcctagt |
1457 |
Q |
| |
|
|||||| ||||||||||| |||||||| ||||| || |||| || |||| ||||||||||||||| | |||||| |||||||||||||||| || |
|
|
| T |
2770026 |
aacttctatgaatcaattcagacaagtactcctctgcaacttcttctggggttcgtctctcatcagatttaataaacccttcagctatccattgccgtgt |
2769927 |
T |
|
| Q |
1458 |
tagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttttaaatagtacggcaggctgtcataactgagagataaa |
1557 |
Q |
| |
|
|| |||| ||| |||||| || || || | |||||||||||||||||||||||||||||||| || ||||| || |||| |||||||| ||||| ||| |
|
|
| T |
2769926 |
taatctcttattattaatagaatagtcttgaggatatataccaaaatacaaaatgcatggtttcaagtagtaaggaaggccatcataactaagagacaaa |
2769827 |
T |
|
| Q |
1558 |
atctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactcactttttgccattcaatcatggttttagattttgttgaaa |
1657 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| ||||| | | |||| |||||| |||||||||||| | | ||||||||||||||||||| |
|
|
| T |
2769826 |
atctttgttagactagataaatgggcattacgtcccaactccaggtttagcttttgactcaccttttgccattcagttcttgttttagattttgttgaaa |
2769727 |
T |
|
| Q |
1658 |
gtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttcttttgacacagccttaagctctggtggacaatgcccaccagg |
1757 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| | || ||||||||||||||| |||||| || | |
|
|
| T |
2769726 |
atagaccaccaatggctacaattgccagaggtagctgcttgcattttcgaacaatttctttagacatggactgaagctctggtggacattgcccatcaag |
2769627 |
T |
|
| Q |
1758 |
ttcaaatctaaatactttcttacagaagagttcccatgctttgtt |
1802 |
Q |
| |
|
||||||||| ||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
2769626 |
ttcaaatctgaatgctttcttgcagaagagttcccatgctttgtt |
2769582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 397 - 1803
Target Start/End: Complemental strand, 2792235 - 2790832
Alignment:
| Q |
397 |
ggcaagtttttcagtgactgcatcggatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaact |
496 |
Q |
| |
|
||||||||||| |||||||||| ||||||| |||| | | || ||| ||| ||| || |||||| | |||||||| | || ||||| |||||||| |
|
|
| T |
2792235 |
ggcaagtttttgagtgactgcagtggatcatagttcaacatagaaaaactcagtcttaccttaacaaggcactcaagttctggaatccaatcaggcaact |
2792136 |
T |
|
| Q |
497 |
tctgtagtctagctttcaaatgaagccgcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaag |
596 |
Q |
| |
|
| |||||||||||||||||||| |||||| ||||| || |||| ||| | | |||||||||| || ||||||||||| ||||||||| ||||||||| |
|
|
| T |
2792135 |
tttgtagtctagctttcaaatgtagccgcagaagttggggaggggatgatatacagttcaagtcgatgatttcatcctcagatattgcagagatattaag |
2792036 |
T |
|
| Q |
597 |
tgattcaaggtgctgcatcttttctactgttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatt |
696 |
Q |
| |
|
|||||||||| | ||| | | |||||| |||| |||||||||||||||||||| |||| || ||||| |||||| ||| ||| ||||||| |||| |
|
|
| T |
2792035 |
atattcaaggtgtttcatttctgctactgcagcacataaggcattcccatgttctcgtcttacttgacttaagcctaacctccttaactgccttagcatt |
2791936 |
T |
|
| Q |
697 |
tccatctcttcaataagatctactcccccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacac |
796 |
Q |
| |
|
| |||||||| ||| ||||||||||||||||||||||||||||| | | |||| |||||||||||||||||| ||||||||||||| ||||| ||||| |
|
|
| T |
2791935 |
ttcatctcttgaatgagatctactcccccatgatctacctccacgtgataaaggttttgaagggaagtcaagattttaatacctttttgcatcctcacac |
2791836 |
T |
|
| Q |
797 |
cagttgtaaagcccaaaacagaatactttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctc |
896 |
Q |
| |
|
|||||||| ||||||||| |||||| ||| | | ||||||| |||| | ||||||||| ||||||||| | ||||||||||||| ||| | || |
|
|
| T |
2791835 |
cagttgtatagcccaaaagagaataatttcctttgtagttactatggcgaacaagaaggttccgtagcttttccaacttgtttatttcatgtggtagttc |
2791736 |
T |
|
| Q |
897 |
atgaacatgtgtttctcttaagtccaatgtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtac |
996 |
Q |
| |
|
||| ||| ||||||||||||| || ||||||||||| |||||||| ||||||| ||||||||||||| | ||| || |||| |||||||||| |||| |
|
|
| T |
2791735 |
atgcacaagtgtttctcttaaatctaatgtctctaaattctgtagctcaccaacagatttaggaagagtttgtacattagtatagcttaggtttatgtac |
2791636 |
T |
|
| Q |
997 |
cttaagtgaaaaagattccccaaatttttaggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttac |
1096 |
Q |
| |
|
|| |||||||||||| | |||| |||||||||||||||| |||| || ||||| |||||||||||||||||||| || |||||||| ||||| | ||||| |
|
|
| T |
2791635 |
ctcaagtgaaaaagacttcccagatttttaggaatatgattcaatgatgtaccttgaatgtcaagtaccttcaaaatgctagactgcgaacacagtttac |
2791536 |
T |
|
| Q |
1097 |
caatgaaaggctccagcaatccaccttttccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttggaattagaagcaat |
1196 |
Q |
| |
|
| || ||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| | || |
|
|
| T |
2791535 |
ccatcaaattctccaatgatccacctttttccaaaacatgaatagcacgaaaatgtgaattgttagtgctcttcaacacattgttgagattagtggatat |
2791436 |
T |
|
| Q |
1197 |
tgataagcgtctagttattccaactgcaactgaatcac---cttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgc |
1293 |
Q |
| |
|
|||| ||||||||| ||||||| | | ||| |||| | ||||||||| |||||||||||||||| | |||||||||||| |||| ||||||| |
|
|
| T |
2791435 |
agataggcgtctagtgcttccaaccacgattgattcaccatcatcatgcacacaatgacagaaacttaagtccttcatttttctgatgagaacttcccag |
2791336 |
T |
|
| Q |
1294 |
aataaatcatggacttgacatgttttaacttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcag |
1393 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||| ||||| ||||||| |||| | |||||| ||||||||||| |||||||| ||||| | |
|
|
| T |
2791335 |
aataaatcatggacttgacatgtttgaactttccctt------caacaattgagacttgaactaaacttctatgaatcaattcagacaagtactcctctg |
2791242 |
T |
|
| Q |
1394 |
ccacttgctccaaagttcttctctcatcagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggata |
1493 |
Q |
| |
|
| |||| ||| ||||| |||||||| | |||| | |||||| || ||||||||||| | ||||| |||| ||| ||||| || || || | ||||| |
|
|
| T |
2791241 |
caacttcctctggagttcgtctctcataacatttaataaacccttcggctatccattgtcgagttaatctcttattattaacagaatagtcttgaggata |
2791142 |
T |
|
| Q |
1494 |
tataccaaaatacaaaatgcatggttttaaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtccc |
1593 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||| |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2791141 |
tataccaaaatacaaaatgcatggtttcaagtagtagggcaggctatcataactcagagataaaatctttgttagactagataaatgggcattacgtccc |
2791042 |
T |
|
| Q |
1594 |
aattccagtctcatattttcactcactttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagct |
1693 |
Q |
| |
|
|| ||||| ||| |||| |||||| ||| ||||||| ||| |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||| |
|
|
| T |
2791041 |
aactccaggttcaggttttgactcaccattttccattcagtcacggttttagcttttgttgaaagtagaccactgacggctacaattgccaggggtagct |
2790942 |
T |
|
| Q |
1694 |
gcttgcatttttgaacaatttcttttgacacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttccca |
1793 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| ||| ||||||| |||||||||||||| |
|
|
| T |
2790941 |
gcttgcattttcgaacaatttcttttgacatgaacttaagctctggtggacaatgcccaccaagctcaaatctgaatgctttcttgcagaagagttccca |
2790842 |
T |
|
| Q |
1794 |
tgctttgttt |
1803 |
Q |
| |
|
|||||||||| |
|
|
| T |
2790841 |
tgctttgttt |
2790832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 384 - 1803
Target Start/End: Complemental strand, 2761148 - 2759726
Alignment:
| Q |
384 |
cttcagcaaatttggcaagtttttcagtgactgcatcggatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacc |
483 |
Q |
| |
|
||||| || ||||||||||||||| |||||||||| ||||||| ||||| | |||||||||| |||||||||||||||| ||||||||| | || | |
|
|
| T |
2761148 |
cttcaacagatttggcaagtttttaagtgactgcagtggatcatttttcaagtaagataaagccaactttatctcaacaagatactcaagttttggaatc |
2761049 |
T |
|
| Q |
484 |
caattaggcaacttctgtagtctagctttcaaatgaagccgcct-aagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatatt |
582 |
Q |
| |
|
|| | |||||| | | |||| ||||||||||||||||| |||| ||||| || || | ||| ||||| ||||||| ||| |||||||||| | ||| |
|
|
| T |
2761048 |
cattcaggcaatgtatctagtttagctttcaaatgaagc-gcctgaagttggggcggagatgagacaaaattcaagttaatgctttcatcctcaccaatt |
2760950 |
T |
|
| Q |
583 |
gcagtgatattaagtgattcaaggtgctgcatcttttctactgttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccata |
682 |
Q |
| |
|
| |||||||||||| ||||||||| | || | | ||| ||||||| ||| | |||||| ||||| |||||||||||||||||||| | | || |
|
|
| T |
2760949 |
gtagtgatattaagatcttcaaggtgtttcaattctactataacagcacttatggcctccccatgctctcttcttacatgccttaaacctaaccttctta |
2760850 |
T |
|
| Q |
683 |
attgccttaacatttccatctcttcaataagatctactcccccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaataccttt |
782 |
Q |
| |
|
| || |||||||||| |||||||| ||| ||||| ||||||||||||| ||||||||||||| |||| ||||| ||||||| || ||||||||||||||| |
|
|
| T |
2760849 |
actgacttaacattttcatctcttgaatgagatcaactcccccatgatttacctccacataataaagcttttgtagggaagccatgtttttaataccttt |
2760750 |
T |
|
| Q |
783 |
aaccatccgcacaccagttgtaaagcccaaaacagaatactttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatt |
882 |
Q |
| |
|
||||| |||||||| |||||| || || | ||||||||| | ||||||||||| || || || | |||||| || |||||||||||||||||||| |
|
|
| T |
2760749 |
ttccatcttcacaccagatgtaaatccaaacagtgaatacttttcttcatagttacggtgtaatgcgaaaaggtgacgaagctttgtgagcttgtttatc |
2760650 |
T |
|
| Q |
883 |
tcacctggcatctcatgaacatgtgtttctcttaagtccaatgtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattcc |
982 |
Q |
| |
|
|| | ||| |||||||| ||| |||| | | ||| |||||| |||||||||||||||| ||||||| ||||||||||||||||||| ||||||| || |
|
|
| T |
2760649 |
tctcttggtatctcatgcacaagtgtgtatgttatatccaatatctctaagttctgtagctcaccaactgatttaggaagaacctttatttttgtactct |
2760550 |
T |
|
| Q |
983 |
ttaggtttaagtaccttaagtgaaaaagattccccaaatttttaggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactg |
1082 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| | |||||||||||||||||| |||||||| | |
|
|
| T |
2760549 |
ttaggtttaagtaccttaagtgaaaaagattccccaaatttttaggaatatgattcaacgatgtaccttcaatgtcaagtaccttcaaaatcctagattt |
2760450 |
T |
|
| Q |
1083 |
tgaacataatttaccaatgaaaggctccagcaatccaccttttccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttg |
1182 |
Q |
| |
|
||||| | ||| || | |||| |||||| | ||| ||| |||||||||||||||||| ||||||||| |||| | |||||||||||||||||| |
|
|
| T |
2760449 |
cgaacacagtttgcccacgaaatgctccaatgacacacttttatgaaaaacatgaatagcacggaaatgtgaaatgttagagctcttcaacacattgttg |
2760350 |
T |
|
| Q |
1183 |
gaattagaagcaattgataagcgtctagttattccaactgcaactgaatcaccttcat---gcacaaaatgacagaaacttaaattcttcatttttctaa |
1279 |
Q |
| |
|
||| | ||||||| |||||||||| | ||||| ||| ||| ||||| |||| ||| | |||| |||||||| |||| |||||||||||||| |
|
|
| T |
2760349 |
tggctagtggttattgataggcgtctagttttcccaaccacaagtgattcaccatcatcatgcatacaatggcagaaactcaaatccttcatttttctaa |
2760250 |
T |
|
| Q |
1280 |
tgatcacttcccgcaataaatcatggacttgacatgttttaacttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctga |
1379 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||| || | |||||||| ||||||||||| || |
|
|
| T |
2760249 |
tgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaagttaacatccgagacttggactagacttctctgaatcaattcaga |
2760150 |
T |
|
| Q |
1380 |
caagtattcctcagccacttgctccaaagttcttctctcatcagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggag |
1479 |
Q |
| |
|
|||||| ||||| || |||||||| |||||||||| |||||||||| |||||||| |||||| |||||| ||||| ||||||||||| ||| | |
|
|
| T |
2760149 |
caagtactcctctgcaacttgctctggagttcttctcccatcagatttaacaaacccttcagctgcccattgttgagttaatctcctatgatgaatagca |
2760050 |
T |
|
| Q |
1480 |
taatcctctggatatataccaaaatacaaaatgcatggttttaaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaat |
1579 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| || |||| ||||||| |||||||| || || ||||||||||||||||| ||||||| |
|
|
| T |
2760049 |
aaatcctctggatataaaccaaaatacaaaatgcatggtttcaagtagtgaggcaggccatcataactaagcgacaaaatctttgttagactcgttaaat |
2759950 |
T |
|
| Q |
1580 |
gggcattacgtcccaattccagtctcatattttcactcactttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaat |
1679 |
Q |
| |
|
||| ||||| ||||| ||||| |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |
|
|
| T |
2759949 |
gggtattacaccccaactccaggctcaaattttgactcaccttttgccattcaatcatggttttagattttgttgaaagtagaccagcaacggccacaat |
2759850 |
T |
|
| Q |
1680 |
tgccagaggtagctgcttgcatttttgaacaatttcttttgacacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttctta |
1779 |
Q |
| |
|
||| |||||||| |||||| | ||||| ||||||||||||| |||||||| |||||| ||||||||| |||| ||| | ||| |||||||||||||||| |
|
|
| T |
2759849 |
tgcaagaggtagttgcttgaacttttgcacaatttcttttgccacagcctcaagctccggtggacaacgccctccaagatcatatctaaatactttcttg |
2759750 |
T |
|
| Q |
1780 |
cagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
2759749 |
cagaagagttcccatgctttgttt |
2759726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 384 - 1803
Target Start/End: Complemental strand, 2820494 - 2819069
Alignment:
| Q |
384 |
cttcagcaaatttggcaagtttttcagtgactgcatcggatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacc |
483 |
Q |
| |
|
|||||||| || |||||||||||||| || |||| ||||||| ||||| ||| |||||||||||||| ||||| |||||| ||||||||| | || | |
|
|
| T |
2820494 |
cttcagcaggttcggcaagtttttcagagattgcagtggatcatttttcaacttagataaagccagcttgatctccacaagagactcaagttttggaatc |
2820395 |
T |
|
| Q |
484 |
caattaggcaacttctgtagtctagctttcaaatgaagccgcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattg |
583 |
Q |
| |
|
|||| |||||| | | || ||| |||||||||||||||||| ||||| |||| ||| ||||| ||||||| ||| |||||||||| | || | |
|
|
| T |
2820394 |
caatcaggcaatgtatctaatctggctttcaaatgaagccgctgaagttggtgtggatatgagacaaaattcaagttaatggtttcatcctcaccaatgg |
2820295 |
T |
|
| Q |
584 |
cagtgatattaagtgattcaaggtgctgcatcttttctactgttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataa |
683 |
Q |
| |
|
|||||||||||| ||||||||| | ||| | | ||| ||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||| |
|
|
| T |
2820294 |
tagtgatattaagatcttcaaggtgtttcatttctactataacagcacttaaggcatccccatgttctcttcttacatgccttaaacctaacctccttaa |
2820195 |
T |
|
| Q |
684 |
ttgccttaacatttccatctcttcaataagatctactcccccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaataccttta |
783 |
Q |
| |
|
||| ||||||||| |||||| | ||| ||||| ||||||| ||| | ||| ||||||||| ||||||| || | |||| || ||||||||||||||| |
|
|
| T |
2820194 |
ctgctttaacattttcatctcgttaatgagatcgactcccctatgttttacatccacataataaagtttctgcaatgaagccatgtttttaatacctttt |
2820095 |
T |
|
| Q |
784 |
accatccgcacaccagttgtaaagcccaaaacagaatactttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttattt |
883 |
Q |
| |
|
||||| |||||||| |||||||||||| | |||||| ||| | |||||||||||||| || ||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
2820094 |
tccatcttcacaccagatgtaaagcccaacagagaataattttcttcatagttacgatgtaatgcaagaaggtgacgtagctttgtgagcttgtttatct |
2819995 |
T |
|
| Q |
884 |
cacctggcatctcatgaacatgtgtttctcttaagtccaatgtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattcct |
983 |
Q |
| |
|
|| ||| |||||| | ||| |||| | ||||| || | |||||||||||||||||||||||||| ||||||||||||| | | || |||||||||| | |
|
|
| T |
2819994 |
gacttggtatctcacgcacaagtgtgtatcttatatcgagtgtctctaagttctgtagttcaccaacagatttaggaagagcatgtatttttgtattctt |
2819895 |
T |
|
| Q |
984 |
taggtttaagtaccttaagtgaaaaagattccccaaatttttaggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgt |
1083 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||||||||| | |||| |||| || ||||| |||||||||||||||||||| |||| ||||| | |
|
|
| T |
2819894 |
taggtttaagtaccttaagtggaaaagactccccaaatttttaggtacatgattcaatgatgtaccttgaatgtcaagtaccttcaaaatccgagacttt |
2819795 |
T |
|
| Q |
1084 |
gaacataatttaccaatgaaaggctccagcaatccaccttttccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttgg |
1183 |
Q |
| |
|
|||| | ||| || | |||| |||||| | | ||| |||| ||||||||||||||||||||||||||||| |||| || ||||||||||||| |||| |
|
|
| T |
2819794 |
gaacccagtttgcccacgaaatgctccaacgacccagctttatcaaaaacatgaatagcacgaaaatgtgaaatgttagtgctcttcaacacatcgttgt |
2819695 |
T |
|
| Q |
1184 |
aattagaagcaattgataagcgtctagttattcca---actgc-aactgaatcaccttcatgcacaaaatgacagaaacttaaattcttcatttttctaa |
1279 |
Q |
| |
|
| ||| | || |||| |||||||||| ||||| || | |||| | || | ||||||||| ||||||| || ||||||| ||| |||||| ||| |
|
|
| T |
2819694 |
cactagtggttatagataggcgtctagtttttccattcacgggtaactcac-catcatcatgcacacaatgacaaaatcttaaatcctttatttttgtaa |
2819596 |
T |
|
| Q |
1280 |
tgatcacttcccgcaataaatcatggacttgacatgttttaacttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctga |
1379 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | | |||||| ||||||||| |||||| ||||| |||| ||||||||| ||||||| ||| || |
|
|
| T |
2819595 |
tgatcacttcccgcaataaatcatggacttgacatttatcaactttaccttcaaagtcaacatccgagacttgaaccagacttctctgaatcagttcaga |
2819496 |
T |
|
| Q |
1380 |
caagtattcctcagccacttgctccaaagttcttctctca--tcagatttg-acaaacccctcagctatccattgcctagttagtctcctatgattaatg |
1476 |
Q |
| |
|
|||||| ||||| || |||||||| |||||||||| || | | ||||| |||||||| |||||||||||||| | ||||| ||||| |||| |||| |
|
|
| T |
2819495 |
caagtactcctctgcaacttgctctggagttcttctcccaactgatatttgaacaaacccttcagctatccattgtcgagttattctcccatgactaata |
2819396 |
T |
|
| Q |
1477 |
gagtaatcctctggatatataccaaaatacaaaatgcatggttttaaatagtacggcaggctgtcataactgagagataaaatctttgttagactagtta |
1576 |
Q |
| |
|
| || |||||||| |||| |||||||||||||||||||||||| | |||| || |||| |||||||| || || ||||||||||||||||| |||| |
|
|
| T |
2819395 |
gcatagtcctctgggtataaaccaaaatacaaaatgcatggtttcaggtagtgagggaggccatcataactaagcgacaaaatctttgttagactcgtta |
2819296 |
T |
|
| Q |
1577 |
aatgggcattacgtcccaattccagtctcatattttcactcactttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctac |
1676 |
Q |
| |
|
|||||||||||||| |||| ||||| |||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2819295 |
aatgggcattacgttccaactccaggctcaaattttgactcaccttttgccattcgatcatggttttagattttgttgaaagtagaccaccaatggctac |
2819196 |
T |
|
| Q |
1677 |
aattgccagaggtagctgcttgcatttttgaacaatttcttttgacacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttc |
1776 |
Q |
| |
|
||||||| ||||| |||||| ||||||||||||||||||||| |||| ||| ||| || ||||||||| | |||||| | ||| | |||||||||||| |
|
|
| T |
2819195 |
gattgccaaaggtaattgcttgaatttttgaacaatttcttttgccacaacctcaagttccggtggacaacgaccaccaagctcagacctaaatactttc |
2819096 |
T |
|
| Q |
1777 |
ttacagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
2819095 |
ttgcagaagagttcccatgctttgttt |
2819069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 75; E-Value: 9e-34
Query Start/End: Original strand, 1201 - 1691
Target Start/End: Original strand, 3321256 - 3321746
Alignment:
| Q |
1201 |
aagcgtctagttattccaactgcaactgaatcaccttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaat |
1300 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| ||| ||||| | || |||||||||||||| ||||||||||||| ||||||||| ||||| |||| |
|
|
| T |
3321256 |
aagcgtctagttattccaacagcaacctgttcatctttatgcattagataacagaaacttaaatctttcatttttctaaggatcacttcacgcaacaaat |
3321355 |
T |
|
| Q |
1301 |
catggacttgacatgttttaacttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttg |
1400 |
Q |
| |
|
|||| |||||| || |||| | || || |||||||| || | || || | || || |||||| || ||||| |||| || ||| || || || |||| |
|
|
| T |
3321356 |
catgaacttgaaattttttgatcttcccatcaaagccgactctggaaacattaaccaaacttctttgtatcaactctgtcaggtactcttctgcaacttc |
3321455 |
T |
|
| Q |
1401 |
ctccaaagttcttctctcatcagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatatacca |
1500 |
Q |
| |
|
|||||| | |||| |||| ||| || |||||||| || || |||||||||| ||| |||||| | |||| |||||||| ||||| |||||||||||| |
|
|
| T |
3321456 |
ctccaatggtcttatctcctcattcttaacaaacccttctgccatccattgccgagtaagtctcttccgattgatggagtagtcctcaggatatatacca |
3321555 |
T |
|
| Q |
1501 |
aaatacaaaatgcatggttttaaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattcca |
1600 |
Q |
| |
|
||||| | ||||||| ||| |||| ||| |||| |||||||| |||||||||||||||||||||||| | || || |||| | | || |||| |
|
|
| T |
3321556 |
aaatatagcatgcatgatttcaaatggtaaggcaaatcatcataactaagagataaaatctttgttagactattcaagtgcacattgtgctctaactcca |
3321655 |
T |
|
| Q |
1601 |
gtctcatattttcactcactttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtag |
1691 |
Q |
| |
|
|| | ||||| |||||| ||| ||| |||| |||||||||| ||||||||| | ||||| |||||||| ||||||||||| ||||| |
|
|
| T |
3321656 |
tccttagattttgactcacctttctccactcaaacatggttttatcttttgttgacaaaagacctccaatggccacaattgccagtggtag |
3321746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 1169 - 1684
Target Start/End: Complemental strand, 3202081 - 3201563
Alignment:
| Q |
1169 |
tcaacacattgttggaattagaagcaattgataagcgtctagttattccaactgcaactga---atcaccttcatgcacaaaatgacagaaacttaaatt |
1265 |
Q |
| |
|
|||||||||| |||||| |||| || || || || || |||||||||||||||| ||| |||||||||||||| ||||| || || ||||||| |
|
|
| T |
3202081 |
tcaacacatttttggaaatagatgctatagaaaaacgcctagttattccaactgtgacttgttcatcaccttcatgcattaaatggcaaaagcttaaatc |
3201982 |
T |
|
| Q |
1266 |
cttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaacttttccttcaaagccaacatttgagacctgaatcagacttctg |
1365 |
Q |
| |
|
| ||||||||||| ||||||||| ||||| |||| |||||||||||| | || | ||| || ||||| ||||| || || || ||||||| |||||| |
|
|
| T |
3201981 |
ttgcatttttctaaggatcacttcacgcaacaaattatggacttgacaactcttgattttcccatcaaaaccaactttggaaacatgaatcaaacttctt |
3201882 |
T |
|
| Q |
1366 |
tgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagatttgacaaacccctcagctatccattgcctagttagtctcc |
1465 |
Q |
| |
|
|| ||||| |||| |||||| || ||||| || | |||| | | ||||| || ||| | | |||||||| ||||| |||||||||| ||| |||||| |
|
|
| T |
3201881 |
tgtatcaactctgtcaagtactcttcagcaacgttctccggattccttctttcctcacacctaacaaacccttcagccatccattgccgagtaagtctct |
3201782 |
T |
|
| Q |
1466 |
tatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttttaaatagtacggcaggctgtcataactgagagataaaatctttgt |
1565 |
Q |
| |
|
| | | |||| ||| ||||| ||||||||||||||||||| ||||||| ||| |||| | |||| || ||||| ||||||||||||||| | |
|
|
| T |
3201781 |
tcgtagtgatggtgtagtcctcgggatatataccaaaatacagcatgcatgatttcaaatggctaggcaaatcatcgtaacttagagataaaatctttat |
3201682 |
T |
|
| Q |
1566 |
tagactagttaaatgggcattacgtcccaattccagtctcatattttcactcactttttgccattcaatcatggttttagattttgttgaaagtagacca |
1665 |
Q |
| |
|
|||||| || ||||| |||| || | || |||| ||||| ||||| |||| | |||| |||||||| || |||||||| ||||||||| | ||||| |
|
|
| T |
3201681 |
tagacttgtcaaatgcacattgcgctctaactccattctcagatttttactcgcctttttccattcaaacacggttttagcttttgttgacaaaagacct |
3201582 |
T |
|
| Q |
1666 |
ccaatggctacaattgcca |
1684 |
Q |
| |
|
|| |||| |||||||||| |
|
|
| T |
3201581 |
gcagtggccacaattgcca |
3201563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1230 - 1463
Target Start/End: Original strand, 3356419 - 3356652
Alignment:
| Q |
1230 |
atcaccttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaacttttcct |
1329 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||||| ||||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||||| || |
|
|
| T |
3356419 |
atcacctccatgcactgaatgacaaaaacttaaatctttcatttttttaatgaccacttcacgcaacaaatcatggacttgacatcttttaactttccca |
3356518 |
T |
|
| Q |
1330 |
tcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagatttga |
1429 |
Q |
| |
|
|||||||||| || || ||||||| || |||||| || | ||| ||| |||||| || ||||| |||| ||| || | |||| | | ||| || | |
|
|
| T |
3356519 |
tcaaagccaagtttggaaacctgaaccaaacttctctgtaccaactctatcaagtactcttcagcaacttcctcgaatggtcttgtgtgctcattcttaa |
3356618 |
T |
|
| Q |
1430 |
caaacccctcagctatccattgcctagttagtct |
1463 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
3356619 |
caaacccttcagccatccattgcctagtaagtct |
3356652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1258 - 1580
Target Start/End: Original strand, 3309714 - 3310036
Alignment:
| Q |
1258 |
cttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaacttttccttcaaagccaacatttgagacctgaatca |
1357 |
Q |
| |
|
||||||| |||||||||||||||||||| | |||| ||||||| ||||||||| |||| ||||| || ||||| ||||| | || ||||||| || |
|
|
| T |
3309714 |
cttaaatctttcatttttctaatgatcacctggtgcaacaaatcattgacttgacaacttttgactttcccatcaaaaccaactctggaaacctgaacca |
3309813 |
T |
|
| Q |
1358 |
gacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagatttgacaaacccctcagctatccattgcctagt |
1457 |
Q |
| |
|
|||||| || | ||| |||| || ||| || ||||| |||| |||||| | | | |||| ||| | |||||||| ||||| |||||||||| ||| |
|
|
| T |
3309814 |
aacttctctgtaccaactctgtcaggtactcttcagcaacttcctccaatgatttagtctcctcattcataacaaacccttcagccatccattgccgagt |
3309913 |
T |
|
| Q |
1458 |
tagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttttaaatagtacggcaggctgtcataactgagagataaa |
1557 |
Q |
| |
|
|||||| | |||| |||| ||| ||||| ||||||||||||||||||| ||||| | ||| || | || |||| |||||||| ||||||||| |
|
|
| T |
3309914 |
aagtctcttccgattgatggtgtagtcctcaggatatataccaaaatacagcatgcaagatttcaagtggtgaggcaaatcatcataactaagagataaa |
3310013 |
T |
|
| Q |
1558 |
atctttgttagactagttaaatg |
1580 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
3310014 |
atctttgttagactagtcaaatg |
3310036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 2792571 - 2792403
Alignment:
| Q |
61 |
tgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggttcaatgctgttaacaaattcatctgacatatcagataagt |
160 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||||||| ||||| || ||||| ||||| |||| ||| | |||||||||| ||| |||||||| | || |
|
|
| T |
2792571 |
tgacgaacgaatacaagaggaacatgcttgataatcgagtagtcttgccctttatctggatcaaagctttcaacaaattcagctggcatatcagtgacgt |
2792472 |
T |
|
| Q |
161 |
caatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggatcttttcca |
229 |
Q |
| |
|
||| |||||||||||| || | ||||| ||||||||||| | |||||||||| ||||| ||||||| |
|
|
| T |
2792471 |
gaatatctttgagtttatgcatgagtttgatgccagagggtaccgccttcagttgggggattttttcca |
2792403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1292 - 1525
Target Start/End: Original strand, 3197483 - 3197716
Alignment:
| Q |
1292 |
gcaataaatcatggacttgacatgttttaacttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctc |
1391 |
Q |
| |
|
|||| |||||||||||| |||| |||| |||||||| |||||||||||| | || || |||| || |||| | | |||| ||| |||||| || || |
|
|
| T |
3197483 |
gcaacaaatcatggactcgacaacttttgacttttccatcaaagccaacactagaaacttgaaccaaacttgtatatatcagctctttcaagtactcttc |
3197582 |
T |
|
| Q |
1392 |
agccacttgctccaaagttcttctctcatcagatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctgga |
1491 |
Q |
| |
|
||| |||| |||||||||| ||| |||| || | | ||||| || || ||||||||||||||||| |||||| || ||| |||| || | ||| ||| |
|
|
| T |
3197583 |
agcaacttcctccaaagtttttccctcaacacacataacaaatccttcggctatccattgcctagtaagtctcttacaattgatggtgtggttctccgga |
3197682 |
T |
|
| Q |
1492 |
tatataccaaaatacaaaatgcatggttttaaat |
1525 |
Q |
| |
|
|| |||||||||||||| |||||| ||||||||| |
|
|
| T |
3197683 |
tagataccaaaatacaacatgcatagttttaaat |
3197716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1230 - 1364
Target Start/End: Complemental strand, 3722617 - 3722483
Alignment:
| Q |
1230 |
atcaccttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaacttttcct |
1329 |
Q |
| |
|
||||||||||||||| |||| || ||||| |||| ||||||||| |||| | || ||| | ||| |||||||||||||||||| |||||||||| || |
|
|
| T |
3722617 |
atcaccttcatgcactgaatggcaaaaactaaaatctttcatttttttaataaccatttcacacaacaaatcatggacttgacatcttttaactttccca |
3722518 |
T |
|
| Q |
1330 |
tcaaagccaacatttgagacctgaatcagacttct |
1364 |
Q |
| |
|
|||||||||| || || ||||||| || |||||| |
|
|
| T |
3722517 |
tcaaagccaagtttggaaacctgaaccaaacttct |
3722483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000007
Query Start/End: Original strand, 1230 - 1313
Target Start/End: Original strand, 3302998 - 3303081
Alignment:
| Q |
1230 |
atcaccttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgaca |
1313 |
Q |
| |
|
|||| ||||||||| ||||||||||||||| || ||||||||| ||||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
3302998 |
atcatcttcatgcattaaatgacagaaactttgatctttcatttttttaatgatcacttcacgcaacacatcatggacttgaca |
3303081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000007
Query Start/End: Original strand, 1429 - 1692
Target Start/End: Original strand, 3303197 - 3303460
Alignment:
| Q |
1429 |
acaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttttaaatagt |
1528 |
Q |
| |
|
|||||||| || || |||||||||| ||| |||||| | | || |||||||| ||||| ||||||||||||||||| | ||||||| ||| |||| || |
|
|
| T |
3303197 |
acaaacccttctgccatccattgccgagtaagtctcttccgtttgatggagtagtcctcaggatatataccaaaatatagcatgcatgatttcaaatggt |
3303296 |
T |
|
| Q |
1529 |
acggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactcactttttgcca |
1628 |
Q |
| |
|
| |||| |||||||| ||||||||||| || | |||||||| || || |||| || | || |||| ||||| |||| |||||| |||| ||| |
|
|
| T |
3303297 |
aaggcaaatcatcataactaagagataaaattcttatcagactagtcaagtgcacattgcgctctaactccactctcagatttctactcaccttttccca |
3303396 |
T |
|
| Q |
1629 |
ttcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagc |
1692 |
Q |
| |
|
|||| |||||||| | |||||||| | |||||||||||||| ||||| ||||| |||||| |
|
|
| T |
3303397 |
ctcaaaaatggttttcggctttgttgacaaaagaccaccaatggcgacaatagccagtggtagc |
3303460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1615 - 1690
Target Start/End: Original strand, 3220909 - 3220984
Alignment:
| Q |
1615 |
ctcactttttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggta |
1690 |
Q |
| |
|
||||| |||| ||| |||| |||||||||||||||||||| | |||||||||||||| ||||||||||| |||| |
|
|
| T |
3220909 |
ctcaccttttcccactcaaaaatggttttagattttgttgataaaagaccaccaatggccacaattgccagtggta |
3220984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 919 - 996
Target Start/End: Original strand, 3197107 - 3197184
Alignment:
| Q |
919 |
tccaatgtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtac |
996 |
Q |
| |
|
|||||||| ||||||||| |||| | ||| |||||| ||||||||||| | |||||||||| |||||||| |||||| |
|
|
| T |
3197107 |
tccaatgtttctaagttcggtaggttaccgatagatctaggaagaaccataacttttgtatgacttaggttcaagtac |
3197184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0691 (Bit Score: 720; Significance: 0; HSPs: 1)
Name: scaffold0691
Description:
Target: scaffold0691; HSP #1
Raw Score: 720; E-Value: 0
Query Start/End: Original strand, 26 - 1803
Target Start/End: Original strand, 3998 - 5778
Alignment:
| Q |
26 |
gaatctcataatcatagtat-tttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggttcaa |
124 |
Q |
| |
|
|||||||||||||| |||| ||||| |||| ||| || |||| ||| ||| ||| ||||||||||| ||||||||| ||||||| |||||| |||| |
|
|
| T |
3998 |
gaatctcataatca-agtaggtttggaccaatccagtggcgaatgaatacaataggtacatgcttgatgatccagtagtattgtccttcgtctggatcaa |
4096 |
T |
|
| Q |
125 |
tgctgttaacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggatctt |
224 |
Q |
| |
|
|||| ||| | |||||| ||| |||||||| | || |||| ||||||| |||| || | | ||| ||||||||||| |||||||| ||| ||||| | |
|
|
| T |
4097 |
tgctcttagcgaattcagctggcatatcagtgatgtaaatgtctttgaggttatgcatgggcttgatgccagagggtacctccttcaattgggggattat |
4196 |
T |
|
| Q |
225 |
ttccaatattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaatttttga |
324 |
Q |
| |
|
||||| | | | ||| |||||||||| |||| ||| | ||||||| || |||||| | || ||| | ||| ||| |||| ||||||||| | |
|
|
| T |
4197 |
ttccagtctaagatgttcaagagaaagcaaacatccatggtctataacaatggaatttactttactcaagcgactaagattcagtgtcatcaatttttta |
4296 |
T |
|
| Q |
325 |
aacccttcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacagagagcttcagcaaatttggcaagtttttcagtgactgcatcggat |
424 |
Q |
| |
|
|| ||| || ||| |||||| |||| ||| || || |||| ||| | || | ||||||||||| || ||||||||||||||||||||||||||| |||| |
|
|
| T |
4297 |
aatcctccactttgaaaatgcaaaacttcgccatcataggcattgtcccacaaagagagcttcaacagatttggcaagtttttcagtgactgcattggat |
4396 |
T |
|
| Q |
425 |
catctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatgaagccg |
524 |
Q |
| |
|
| |||||||||||||||||| | | | |||||| ||||||| ||| ||||| | || ||||| ||| ||| ||| || ||| |||||||||||||| || |
|
|
| T |
4397 |
cgtctttcagcttggataaacctaaccttatcttaacaagaaactcgagttttggaatccaatcaggtaacctctctaatctggctttcaaatgaagtcg |
4496 |
T |
|
| Q |
525 |
cctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattgcagtgatattaagtgattcaaggtgctgcatcttttctact |
624 |
Q |
| |
|
| |||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||| | |
|
|
| T |
4497 |
ctgaagtttgggtggggatgacacaaagtttaagtcaataatttcatcctctgctattgcagtgatattaagtgattcaaggtgttgcatctctactaat |
4596 |
T |
|
| Q |
625 |
gttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatctactcccc |
724 |
Q |
| |
|
| ||||||||||||| | ||||||||| |||||||||||||||||||||||| ||| ||||||| |||| |||||||||||| ||||||||||||| |
|
|
| T |
4597 |
gccgcacttaaggcatggctatgttctcttcttacatgccttaaacctaacttccttaactgccttagtattttcatctcttcaatgagatctactcccc |
4696 |
T |
|
| Q |
725 |
catgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacagaatactt |
824 |
Q |
| |
|
||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| |||||| || |
|
|
| T |
4697 |
catgatctagctcgacataacaaatattttgtagggaagtcaagtttttaatacctttttccatcagcacaccagttgtaaagcctaaaatagaatattt |
4796 |
T |
|
| Q |
825 |
tgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaagtccaat |
924 |
Q |
| |
|
| ||||||||||||||||||||||| || ||||||| | |||| ||||||||||||||| ||||| |||||| ||| ||||||||||||| ||||| |
|
|
| T |
4797 |
atcttcatagttacgatggaaagcaagtagatgtcgtaaccttgtcagcttgtttatttcaattggcaactcatgcacaagtgtttctcttaaatccaac |
4896 |
T |
|
| Q |
925 |
gtctctaagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaaatttt |
1024 |
Q |
| |
|
||||||||||| ||||| ||||||| ||||||||||||| ||| ||||||||| |||| |||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
4897 |
gtctctaagttttgtagctcaccaacagatttaggaagagcctctacttttgtgttccgtaggtttatgtacctcaagtgaaaaagattccccaaatttt |
4996 |
T |
|
| Q |
1025 |
taggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatccaccttt |
1124 |
Q |
| |
|
| ||||||||| |||| || ||||| |||||||||||||||||||| ||| |||||||||| || | |||||| |||||| |||||| | |||||||||| |
|
|
| T |
4997 |
tgggaatatgattcaatgatgtaccttgaatgtcaagtaccttcaaaatcttagactgtgagcacagtttacccatgaaatgctccaacgatccaccttt |
5096 |
T |
|
| Q |
1125 |
tccaaaaacatgaatagcacgaaaatgtgaattgtttgttctcttcaacacattgttggaattagaagcaattgataagcgtctagttattccaactgca |
1224 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||| | || ||||||||||||||| ||| | ||| | || || | |||||||||| || |||| || |
|
|
| T |
5097 |
ttcaaaaacgtgaatagcacgaaaatgtgaattatcggtgctcttcaacacattgctgggactagtggttatagacaggcgtctagtttttacaaccaca |
5196 |
T |
|
| Q |
1225 |
actgaatcac---cttcatgcacaaaatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaa |
1321 |
Q |
| |
|
| ||| |||| |||||||||| ||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
5197 |
attgattcactattttcatgcacacaatgacaaaaagttaaatccttcatttttctaatgatcacttcacgcaataaatcatggacttgacatgtttgaa |
5296 |
T |
|
| Q |
1322 |
cttttccttcaaagccaacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatc |
1421 |
Q |
| |
|
|||| || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| || || || |||||||| |||| ||||||||| |
|
|
| T |
5297 |
ctttcccctcaaagccaacatttgagacctgaaccagacttctgtgaatcaattcagacaagtactcatctgcaacttgctcgggagtttgtctctcatc |
5396 |
T |
|
| Q |
1422 |
agatttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggtttt |
1521 |
Q |
| |
|
| | || |||||||| |||||||||||||| | ||||| |||| |||||||||| || || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5397 |
atacttaacaaacccttcagctatccattgacgagttaatctcttatgattaatagaatagtcctctggatatataccaaaatacaaaatgcatggtttc |
5496 |
T |
|
| Q |
1522 |
aaatagtacggcaggctgtcataactgagagataaaatctttgttagactagttaaatgggcattacgtcccaattccagtctcatattttcactcactt |
1621 |
Q |
| |
|
|| ||||| ||||||| |||||||| || || ||||||||||||||||| |||||||||||||||||| |||| || || |||| ||||| |||||| | |
|
|
| T |
5497 |
aagtagtaaggcaggccatcataactaagtgacaaaatctttgttagactcgttaaatgggcattacgttccaactctaggctcaaattttgactcacct |
5596 |
T |
|
| Q |
1622 |
tttgccattcaatcatggttttagattttgttgaaagtagaccaccaatggctacaattgccagaggtagctgcttgcatttttgaacaatttcttttga |
1721 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5597 |
tttgccattcaaccattgttttagattttgttgaaagtagaccaccaatggctacaattgcaagaggtagctgcttgcattttttaacaatttcttttga |
5696 |
T |
|
| Q |
1722 |
cacagccttaagctctggtggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgttt |
1803 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |
|
|
| T |
5697 |
tacagcctcaagctcaagtggacaatgcccaccaggttcaaatctaaatacttttttgcagaagagttcccatactttgttt |
5778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 449; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 22 - 1160
Target Start/End: Original strand, 11115608 - 11116732
Alignment:
| Q |
22 |
gtgcgaatctcataatcatagtattttgggccaaaccattgacgaaagaaaacacgaggaacatgcttgataatccagtagctgtgtcctttgtctggtt |
121 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||| || ||||||||||||||||||| | ||||||| ||||| | |
|
|
| T |
11115608 |
gtgcgaatctcataatcatagaatttcgggccaaaccattgacgaatgaatacaatagaaacatgcttgataatccagcggtcttgtccttcatctggat |
11115707 |
T |
|
| Q |
122 |
caatgctgttaacaaattcatctgacatatcagataagtcaatgactttgagtttatccaagtgtttgcagccagagggtatctccttcagttgagggat |
221 |
Q |
| |
|
||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||||| |
|
|
| T |
11115708 |
caatgctcttaacaaattcatctggcatatcaactaagtcaatggctttgagtttatccaagtgtttgatgccagagggtaccacctttagttgggggat |
11115807 |
T |
|
| Q |
222 |
cttttccaatattatatgctcaagagaaatcaaagctcctttctctataaggatcaaatttagtctattcacgtgacggagaaccagttctttcaatttt |
321 |
Q |
| |
|
|||||||||| | | ||| |||||||| | |||||||||||||||||||||||| ||| | || ||||| || || |||| ||||| |||| ||||| |
|
|
| T |
11115808 |
cttttccaatttaagatgttcaagagagagcaaagctcctttctctataaggatatgattcactccattcaagtaactaagaatcagttatttccatttt |
11115907 |
T |
|
| Q |
322 |
tgaaacccttcattttcaaaatggaaaatttcaccctcgtaggtattatgcccaacagagagcttcagcaaatttggcaagtttttcagtgactgcatcg |
421 |
Q |
| |
|
||||| ||| ||| || |||||| ||| ||||| || ||| ||| | || |||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
11115908 |
tgaaatcctccatcttgaaaatgcaaatgatcaccatcacaggcattctccc--acagagagcttcagcagatttggcaagtttttcagtgactgcattg |
11116005 |
T |
|
| Q |
422 |
gatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacccaattaggcaacttctgtagtctagctttcaaatgaag |
521 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||| ||||| || |||||| || | || ||||| ||||||||| | |||||||||||||||||||| |
|
|
| T |
11116006 |
gatcatctttcagcttggataaagctagccttatctaaacaatacactcaagatttggaatccaatcaggcaacttatcaagtctagctttcaaatgaag |
11116105 |
T |
|
| Q |
522 |
ccgcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctc-gcatattgcagtgatattaagtgattcaaggtgctgcatcttttc |
620 |
Q |
| |
|
|||| |||||| ||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
11116106 |
tcgccgaagtttgggt------------aaggtcaagtcaataatttcatcctctgca-attgcagtgatattaagtgattcaaggtgttgcatctcttc |
11116192 |
T |
|
| Q |
621 |
tactgttgcacttaaggcattcccatgttctctctttacatgccttaaacctaacttccataattgccttaacatttccatctcttcaataagatctact |
720 |
Q |
| |
|
|| || |||||||| |||||| || ||||||| || ||| |||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
11116193 |
tattgcagcacttaatgcattcacaagttctcttttcacacgccttaaacctaactttcttaactgccttaacattttcatctcttctataagatctact |
11116292 |
T |
|
| Q |
721 |
cccccatgatctacctccacataacaaagtttttgaagggaagtcaagtttttaatacctttaaccatccgcacaccagttgtaaagcccaaaacagaat |
820 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| |
|
|
| T |
11116293 |
cccccatgatctacctccacataacacatattttgaagggaagtcaagtttttaatacctttttccataagcacaccagttataaagcccaaaacagaat |
11116392 |
T |
|
| Q |
821 |
actttgcatcatagttacgatggaaagcaagaaggtgtcgtagctttgtgagcttgtttatttcacctggcatctcatgaacatgtgtttctcttaagtc |
920 |
Q |
| |
|
| ||| | ||||||| ||||||||||||||||| | ||||| |||||| ||||||||||| || ||| || ||||| ||| ||||||||||||| || |
|
|
| T |
11116393 |
atttttcttcatagtaacgatggaaagcaagaaaatttcgtaactttgtcagcttgtttataacatttggtatttcatgcacaagtgtttctcttaaatc |
11116492 |
T |
|
| Q |
921 |
caatgtctc-taagttctgtagttcaccaatagatttaggaagaacctttacttttgtattccttaggtttaagtaccttaagtgaaaaagattccccaa |
1019 |
Q |
| |
|
|| || ||| |||||||||||| ||||||| ||||||| ||||||||| |||||||| |||||| ||||||| |||| | |||||||||||||||||||| |
|
|
| T |
11116493 |
cattgcctcttaagttctgtagctcaccaacagatttacgaagaacctgtacttttgcattcctcaggtttacgtacttcaagtgaaaaagattccccaa |
11116592 |
T |
|
| Q |
1020 |
atttttaggaatatgaatcaaagacgtaccctgaatgtcaagtaccttcaatatcctagactgtgaacataatttaccaatgaaaggctccagcaatcca |
1119 |
Q |
| |
|
||||| ||||||| || |||| || ||||| || || | |||| ||||||| | ||||||| || ||| |||||||| | ||||||||||| |||||| |
|
|
| T |
11116593 |
attttcaggaatacgattcaacgatgtaccttgcatat-aagtgccttcaaaactctagactttgcacacaatttacccaggaaaggctccaagaatcca |
11116691 |
T |
|
| Q |
1120 |
ccttttccaaaaacatgaatagcacgaaaatgtgaattgtt |
1160 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
11116692 |
cctttttcaaaaacatgaatagcacggaaatgtgaattgtt |
11116732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1424 - 1520
Target Start/End: Original strand, 11116747 - 11116842
Alignment:
| Q |
1424 |
atttgacaaacccctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggttt |
1520 |
Q |
| |
|
|||| |||||||| |||||||||||| | | ||||| |||||| |||||||| | || ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11116747 |
atttaacaaacccttcagctatccat-gtcgagttaatctcctgtgattaatagcatagtcctctggatatacaccaaaatacaaaatgcatggttt |
11116842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1647 - 1694
Target Start/End: Original strand, 11116893 - 11116940
Alignment:
| Q |
1647 |
ttttgttgaaagtagaccaccaatggctacaattgccagaggtagctg |
1694 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||| ||||| |
|
|
| T |
11116893 |
ttttgttgaaagtaggccaccaatggctacaattgccaaaggaagctg |
11116940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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