View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13292_low_16 (Length: 330)
Name: NF13292_low_16
Description: NF13292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13292_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 22 - 317
Target Start/End: Original strand, 52583978 - 52584273
Alignment:
| Q |
22 |
gagctcagaggagagtgttctagcacctgttctactcccatgaaacaacttctcagcatatttttcattcattctatcaatcacatttccaccaacatca |
121 |
Q |
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| T |
52583978 |
gagctcagaggagagtgttctagcacctgttctactcccatgaaacaacttctcagcatatttttcattcattctatcaatcacatttccaccaacatca |
52584077 |
T |
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| Q |
122 |
acaagatcttcaagaagtgactgtactggtttaaggtatctagagttcccaataacggaaccaaaactctcacttccataagaagtagaagtagaacggt |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52584078 |
acaagatcttcaagaagtgactgtactggtttaaggtatctagagttcccaataacagaaccaaaactctcacttccataagaagtagaagtagaacggt |
52584177 |
T |
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| Q |
222 |
tcaataataatgagttattattattagaacctgaagcaaaagttccacttccaccactgaaaaaataatcacttgttagattctccaccacaggtt |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
52584178 |
tcaataataatgagttattattattagaacctgaagcaaaagttccacttccaccactgaaaaaataatcactagttagattctccaccacaggtt |
52584273 |
T |
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