View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13292_low_17 (Length: 325)
Name: NF13292_low_17
Description: NF13292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13292_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 940273 - 940583
Alignment:
| Q |
1 |
aagttatgtgtgtcaaagtttctagaatcannnnnnnnnnnnnnagaaacgttttcttgaaatgtgggggtgaggaatgttgctgcctaaccctccactg |
100 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |
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| T |
940273 |
aagttatgtgtgtcaaagtttctagaatcatttttgatttttttagaaacgttttcttgaaatgtgggggtgaggaatattgctgcctaacccttcactg |
940372 |
T |
|
| Q |
101 |
aaatagaaaaagatgggttgaaattatcttgactcggttgacatcatttatctaattagggnnnnnnnnnnnnnnnnngttttcatttattttgttcatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |
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| T |
940373 |
aaatagaaaaagatgggttgaaattatcttgactcggttgacatcatttatctaattacggtatatatatacatatatgttttcatttattttgttcatt |
940472 |
T |
|
| Q |
201 |
aattagaagtgttgtagggttcatgtaattgtatagccaagacaatattattttcttattttcacaaaattggctgtagatgattctaaaatgacaaata |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
940473 |
aattagaagtgttgtagggttcatgtaattgtatagccaagacaatattattttcttattttcacaaaattggctgtagatgattctaaaatgacaaata |
940572 |
T |
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| Q |
301 |
gttgtaatata |
311 |
Q |
| |
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||||||||||| |
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| T |
940573 |
gttgtaatata |
940583 |
T |
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