View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13293_low_4 (Length: 261)

Name: NF13293_low_4
Description: NF13293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13293_low_4
NF13293_low_4
[»] chr4 (19 HSPs)
chr4 (18-248)||(37394768-37394998)
chr4 (18-243)||(44050650-44050874)
chr4 (56-249)||(10374355-10374548)
chr4 (56-237)||(10422984-10423165)
chr4 (54-249)||(3407803-3407998)
chr4 (54-249)||(19069514-19069709)
chr4 (70-249)||(4774168-4774347)
chr4 (54-249)||(49564156-49564351)
chr4 (70-249)||(18578962-18579141)
chr4 (54-249)||(38460739-38460934)
chr4 (18-249)||(24415450-24415679)
chr4 (76-249)||(11506658-11506831)
chr4 (77-222)||(6186995-6187140)
chr4 (54-157)||(50904819-50904922)
chr4 (18-147)||(51642298-51642423)
chr4 (120-213)||(30043023-30043116)
chr4 (18-55)||(3407983-3408020)
chr4 (64-204)||(31598814-31598954)
chr4 (18-55)||(18578914-18578951)
[»] chr3 (22 HSPs)
chr3 (18-249)||(46989804-46990035)
chr3 (18-249)||(14402569-14402800)
chr3 (18-249)||(4002055-4002286)
chr3 (18-249)||(36813129-36813360)
chr3 (18-249)||(6489620-6489852)
chr3 (54-249)||(50957243-50957438)
chr3 (54-249)||(48246725-48246920)
chr3 (54-249)||(2743769-2743964)
chr3 (54-249)||(9426919-9427114)
chr3 (54-249)||(6744890-6745085)
chr3 (54-249)||(8156823-8157018)
chr3 (54-249)||(13743580-13743775)
chr3 (54-249)||(30943505-30943700)
chr3 (54-249)||(2857546-2857741)
chr3 (54-249)||(3952778-3952973)
chr3 (56-246)||(21952115-21952305)
chr3 (70-249)||(67213-67392)
chr3 (54-119)||(7841409-7841474)
chr3 (18-55)||(3952958-3952995)
chr3 (18-55)||(6745070-6745107)
chr3 (18-55)||(67165-67202)
chr3 (144-204)||(35443508-35443568)
[»] chr1 (39 HSPs)
chr1 (18-249)||(50113599-50113830)
chr1 (54-249)||(8459271-8459466)
chr1 (40-249)||(12643505-12643714)
chr1 (54-249)||(44469575-44469770)
chr1 (54-249)||(37018960-37019155)
chr1 (70-249)||(1655644-1655823)
chr1 (54-249)||(6558215-6558410)
chr1 (54-249)||(9710891-9711086)
chr1 (54-249)||(29352547-29352742)
chr1 (54-249)||(3944289-3944484)
chr1 (54-249)||(30909593-30909788)
chr1 (54-249)||(3993406-3993601)
chr1 (54-249)||(5081928-5082123)
chr1 (54-249)||(13633436-13633631)
chr1 (54-248)||(20353500-20353694)
chr1 (18-249)||(46978798-46979039)
chr1 (18-249)||(13177690-13177917)
chr1 (54-249)||(38771945-38772140)
chr1 (54-249)||(51666230-51666425)
chr1 (70-232)||(19495382-19495544)
chr1 (67-249)||(25039645-25039827)
chr1 (55-249)||(7966298-7966497)
chr1 (70-247)||(36072702-36072879)
chr1 (55-248)||(5141435-5141628)
chr1 (70-249)||(33168243-33168422)
chr1 (54-249)||(38690223-38690417)
chr1 (18-248)||(4517959-4518197)
chr1 (54-108)||(15051053-15051107)
chr1 (18-55)||(3993586-3993623)
chr1 (18-55)||(5082108-5082145)
chr1 (18-55)||(7966275-7966312)
chr1 (18-55)||(13633616-13633653)
chr1 (18-55)||(15051092-15051129)
chr1 (18-55)||(20353679-20353716)
chr1 (18-55)||(30909773-30909810)
chr1 (18-55)||(37019140-37019177)
chr1 (18-55)||(44469755-44469792)
chr1 (18-55)||(51666410-51666447)
chr1 (18-55)||(33168195-33168232)
[»] chr7 (21 HSPs)
chr7 (18-249)||(19044584-19044815)
chr7 (18-249)||(20709821-20710052)
chr7 (54-249)||(47742553-47742748)
chr7 (54-249)||(15069914-15070109)
chr7 (54-249)||(18109357-18109552)
chr7 (18-249)||(47064858-47065089)
chr7 (54-249)||(604093-604288)
chr7 (54-249)||(42503402-42503597)
chr7 (54-244)||(34622812-34623002)
chr7 (54-249)||(43619994-43620189)
chr7 (54-249)||(45767424-45767619)
chr7 (54-249)||(30790570-30790765)
chr7 (20-248)||(10705541-10705765)
chr7 (77-249)||(29592839-29593011)
chr7 (20-246)||(12111509-12111729)
chr7 (18-55)||(47742733-47742770)
chr7 (18-55)||(15070094-15070131)
chr7 (18-55)||(18109537-18109574)
chr7 (18-55)||(30790750-30790787)
chr7 (18-55)||(42503582-42503619)
chr7 (18-55)||(45767604-45767641)
[»] chr2 (34 HSPs)
chr2 (18-249)||(24601931-24602160)
chr2 (18-249)||(24611954-24612183)
chr2 (18-249)||(1096861-1097092)
chr2 (18-249)||(9659604-9659837)
chr2 (18-249)||(81814-82045)
chr2 (18-249)||(439374-439605)
chr2 (18-249)||(41052913-41053142)
chr2 (54-249)||(41181724-41181919)
chr2 (55-249)||(45479385-45479579)
chr2 (54-249)||(3795664-3795859)
chr2 (54-249)||(7267008-7267203)
chr2 (70-248)||(12905859-12906037)
chr2 (54-237)||(28342836-28343020)
chr2 (54-249)||(5351295-5351490)
chr2 (54-249)||(10620288-10620483)
chr2 (58-249)||(39798004-39798195)
chr2 (54-249)||(41564054-41564249)
chr2 (54-249)||(209299-209494)
chr2 (54-249)||(24753588-24753783)
chr2 (70-249)||(43944031-43944210)
chr2 (61-249)||(1150595-1150783)
chr2 (18-249)||(41004818-41005045)
chr2 (144-249)||(38949750-38949855)
chr2 (54-147)||(38950232-38950325)
chr2 (54-114)||(18000547-18000607)
chr2 (64-235)||(25613526-25613697)
chr2 (144-204)||(43668500-43668560)
chr2 (18-55)||(5351475-5351512)
chr2 (18-55)||(7267188-7267225)
chr2 (18-55)||(24753768-24753805)
chr2 (18-55)||(38950310-38950347)
chr2 (18-55)||(41564234-41564271)
chr2 (18-49)||(43943983-43944014)
chr2 (18-55)||(12905811-12905848)
[»] chr8 (24 HSPs)
chr8 (18-249)||(2124472-2124703)
chr8 (18-249)||(43376843-43377074)
chr8 (18-249)||(31959611-31959842)
chr8 (54-249)||(35962621-35962816)
chr8 (54-249)||(39771-39966)
chr8 (54-249)||(22588006-22588201)
chr8 (54-249)||(23924279-23924474)
chr8 (54-249)||(30301449-30301644)
chr8 (54-249)||(32375966-32376161)
chr8 (54-249)||(7344120-7344315)
chr8 (54-249)||(8419719-8419914)
chr8 (18-249)||(7171881-7172108)
chr8 (77-249)||(41744160-41744332)
chr8 (55-249)||(22661138-22661332)
chr8 (54-249)||(43679710-43679905)
chr8 (70-212)||(4867394-4867536)
chr8 (145-244)||(39751659-39751758)
chr8 (54-153)||(39751374-39751473)
chr8 (54-134)||(20548938-20549018)
chr8 (107-212)||(31281179-31281282)
chr8 (61-168)||(30972519-30972626)
chr8 (18-55)||(7344300-7344337)
chr8 (18-55)||(20549003-20549040)
chr8 (18-55)||(22588186-22588223)
[»] chr6 (21 HSPs)
chr6 (18-249)||(7537478-7537709)
chr6 (18-244)||(2051319-2051545)
chr6 (55-249)||(23959205-23959399)
chr6 (18-249)||(28362281-28362512)
chr6 (54-249)||(13382955-13383150)
chr6 (54-233)||(29286516-29286695)
chr6 (54-249)||(31150629-31150824)
chr6 (54-237)||(25140681-25140865)
chr6 (54-249)||(1608608-1608803)
chr6 (54-249)||(18609797-18609992)
chr6 (18-249)||(29667387-29667614)
chr6 (55-249)||(2259400-2259593)
chr6 (55-213)||(34230795-34230953)
chr6 (54-108)||(18351348-18351402)
chr6 (55-213)||(20448388-20448545)
chr6 (18-55)||(18609977-18610014)
chr6 (18-55)||(26702456-26702493)
chr6 (18-55)||(31150809-31150846)
chr6 (133-215)||(19129562-19129644)
chr6 (18-55)||(18351387-18351424)
chr6 (18-55)||(25140850-25140887)
[»] scaffold0201 (1 HSPs)
scaffold0201 (18-249)||(22692-22923)
[»] chr5 (27 HSPs)
chr5 (54-249)||(7796891-7797086)
chr5 (18-249)||(34122816-34123047)
chr5 (54-249)||(13563955-13564150)
chr5 (54-249)||(27863717-27863912)
chr5 (18-249)||(1039356-1039586)
chr5 (54-249)||(38856029-38856224)
chr5 (54-249)||(14280542-14280737)
chr5 (54-249)||(28882302-28882497)
chr5 (54-249)||(37814896-37815091)
chr5 (58-249)||(11029325-11029516)
chr5 (18-199)||(25877910-25878089)
chr5 (67-249)||(33994713-33994895)
chr5 (18-249)||(24053445-24053672)
chr5 (54-249)||(4196830-4197023)
chr5 (54-249)||(25890308-25890503)
chr5 (70-249)||(24050366-24050547)
chr5 (54-191)||(34079753-34079890)
chr5 (89-248)||(28387821-28387979)
chr5 (54-170)||(7017825-7017941)
chr5 (18-249)||(30352712-30352939)
chr5 (119-249)||(43179429-43179559)
chr5 (55-200)||(6267789-6267933)
chr5 (18-55)||(14280722-14280759)
chr5 (18-55)||(34079875-34079912)
chr5 (185-249)||(7017943-7018007)
chr5 (18-55)||(24050318-24050355)
chr5 (18-55)||(43179644-43179681)
[»] scaffold0494 (2 HSPs)
scaffold0494 (54-249)||(4890-5085)
scaffold0494 (18-55)||(5070-5107)
[»] scaffold0116 (2 HSPs)
scaffold0116 (54-249)||(15519-15714)
scaffold0116 (18-55)||(15699-15736)
[»] scaffold0219 (2 HSPs)
scaffold0219 (20-167)||(19743-19890)
scaffold0219 (165-249)||(19498-19582)
[»] scaffold0169 (1 HSPs)
scaffold0169 (99-249)||(10828-10978)
[»] scaffold0794 (1 HSPs)
scaffold0794 (76-249)||(1315-1488)
[»] scaffold0513 (1 HSPs)
scaffold0513 (54-142)||(8513-8601)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-246)||(21929-22144)


Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 37394998 - 37394768
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37394998 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgc 37394899  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  37394898 aattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcat 37394799  T
Q  218 atagcttgtcgttttccatgcatattcatct 248  Q
    | | |||| |||||||||||| |||||||||    
T  37394798 acaacttgccgttttccatgcgtattcatct 37394768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 44050874 - 44050650
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  44050874 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttgcattcaacgc 44050775  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44050774 aattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa-acat 44050676  T
Q  218 atagcttgtcgttttccatgcatatt 243  Q
    ||||||||| ||||||||||| ||||    
T  44050675 atagcttgttgttttccatgcgtatt 44050650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 56 - 249
Target Start/End: Original strand, 10374355 - 10374548
Alignment:
Q  56 gtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatta 155  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  10374355 gtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatatta 10374454  T
Q  156 tcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||    
T  10374455 tcttccaccatatttcgaaacataaatctgatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctc 10374548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 10423165 - 10422984
Alignment:
Q  56 gtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatta 155  Q
    ||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  10423165 gtgtccataattaaacaactcattacatatcattagattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatatta 10423066  T
Q  156 tcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatg 237  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  10423065 tcttccaccatattccgaaacataaatccgacgtcgcaatcgccgcgaataagccaagacatatagcttgtcgttttccatg 10422984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 3407998 - 3407803
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  3407998 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 3407899  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||  ||||||||||    
T  3407898 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgtgtattcatctc 3407803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 19069514 - 19069709
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19069514 aagtgtccataattaaactactcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatgtataatatat 19069613  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  19069614 tatcttccaccatattccgaaacataaacccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 19069709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 70 - 249
Target Start/End: Complemental strand, 4774347 - 4774168
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||    
T  4774347 acaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatatt 4774248  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  4774247 ccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccatgcgtattcatctc 4774168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 49564156 - 49564351
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  49564156 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 49564255  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  49564256 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 49564351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 70 - 249
Target Start/End: Original strand, 18578962 - 18579141
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  18578962 acaactcattacacatcattaaattaaatcacttcttacattcaacgcaattgcatatagaactaacatacatatataatatattatcttctaccatatt 18579061  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||||||| ||||||||||||||||   ||| ||||||| ||||||||||| |||||||||||| ||||||||||    
T  18579062 ccgaaacataaattcgacgtcgctatcgtcttcaattagccaaggcatatagcttgccgttttccatgcgtattcatctc 18579141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 38460739 - 38460934
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||  ||| ||||||||| ||||||||||    
T  38460739 aagtgtccataattaaacaactcattacacatgattatattaaatccctacttacattcatcacaattgcatatgcaacaaacatacatatataatatat 38460838  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| ||||||||| ||||||||||||| ||||||||||||||   ||||||||||| ||||||||||| ||||||||||||  |||||||||    
T  38460839 tattttccaccatattctgaaacataaatccaacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgcattcatctc 38460934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 24415450 - 24415679
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacg 116  Q
    |||||||||||||||||||||| |||||||||||||||    | | | ||||  |||||||||||| || |||||||||||||||||||||||||||||     
T  24415450 tgaaattcatcaaaacgttacatagtgtccataattaaa---caacacatta--caactcattacatatcattaaattaaatccctacttacattcaaca 24415544  T
Q  117 caattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaag--a 214  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||| | ||||||||||||||||||| | ||||||||||||||   |||||| ||||  |    
T  24415545 caattgcatatggaacgaacatacatatataatatattattttccatcatattccgaaacataaatgcaacgtcgctatcgtcttcaataagtcaaggca 24415644  T
Q  215 catatagcttgtcgttttccatgcatattcatctc 249  Q
     ||||||||||||||||||||||  ||||||||||    
T  24415645 tatatagcttgtcgttttccatgtgtattcatctc 24415679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 76 - 249
Target Start/End: Complemental strand, 11506831 - 11506658
Alignment:
Q  76 cattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaa 175  Q
    |||||||||| |||| ||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||||||||||||| ||| |||||||| | |||    
T  11506831 cattacacatcattatattaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaa 11506732  T
Q  176 cataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||||||||||||| |||   |||||| |||| ||||||||||| |||||||||||| ||||||||||    
T  11506731 cataaatccgacgtcgctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctc 11506658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 6186995 - 6187140
Alignment:
Q  77 attacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaac 176  Q
    |||||| || ||||||||||||| ||||| |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||| | ||||    
T  6186995 attacatatcattaaattaaatctctactgacattctacgcatttgcatatggaacgaacatacatatataatatattatcttccaccatattgctaaac 6187094  T
Q  177 ataaatccgacgtcgctatcgtcgcgaataagccaagacatatagc 222  Q
    |||||||| | ||||||||||||| ||||||||||||||| |||||    
T  6187095 ataaatccaatgtcgctatcgtcgtgaataagccaagacacatagc 6187140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 50904922 - 50904819
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||  ||||||||||    
T  50904922 aagtgttcataattaaacaattcatttcacatcattaaattaaatccctacttacattcaacacaattgcatatggaacaaacatacaaatataatatat 50904823  T
Q  154 tatc 157  Q
    ||||    
T  50904822 tatc 50904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 51642298 - 51642423
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacg 116  Q
    |||||||||||||||||||||||| |||||||||||||    | | | ||||  |||||||||||| || ||||| ||||||||| ||||||||||| |     
T  51642298 tgaaattcatcaaaacgttacaaattgtccataattaaa---caacacatta--caactcattacatatcattaagttaaatcccaacttacattcatca 51642392  T
Q  117 caattgcatatagaacgaacatacatgtata 147  Q
    ||||| |||||||||||||||||||| ||||    
T  51642393 caattacatatagaacgaacatacatatata 51642423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 30043116 - 30043023
Alignment:
Q  120 ttgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaag 213  Q
    ||||| || ||||||| |||||  ||||||||||||||||| ||||||||| |||||||||||||||||||  ||||| |  ||||||||||||    
T  30043116 ttgcaaatggaacgaaaatacaaatataatatattatcttccaccatattctgaaacataaatccgacgtcattatcgccctgaataagccaag 30043023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 3408020 - 3407983
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  3408020 tgaaattcatcaaaacattacaaagtgtccataattaa 3407983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 31598814 - 31598954
Alignment:
Q  64 aattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctac 163  Q
    |||||| |||||||||||| |  |||| || ||||| ||||| |||||| |||||  ||||  |||||||| || | || ||||||||||||| ||| ||    
T  31598814 aattaagcaactcattacataacattatatgaaatctctactgacattctacgcacatgcagttagaacgaccacaaatatataatatattattttcaac 31598913  T
Q  164 catattccgaaacataaatccgacgtcgctatcgtcgcgaa 204  Q
    |||||  | |||||||||||  | |||||| ||||| ||||    
T  31598914 catatgtctaaacataaatcttatgtcgctgtcgtcacgaa 31598954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 18578914 - 18578951
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  18578914 tgaaattcatcaaaatgttacatagtgtccataattaa 18578951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 46989804 - 46990035
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  46989804 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacac 46989903  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||| | |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||  |||||||||||||||||||| |||    
T  46989904 aattgcatgtggaacgaacatacatatataatatattatcttccaccatattccaaaacataaatccgacgtcgtcatcgtcgcgaataagccaaggcat 46990003  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  46990004 atagcttgccgttttccatgcgtattcatctc 46990035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 14402800 - 14402569
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  14402800 tgaaattcatgaaaacattacaaagtgtctataattaagtgtccataattaaacaactcattacacgtcattaaattaaatccctacttacattcaacgc 14402701  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||    
T  14402700 aattgcatatagaacgaacatacatatataatatattattttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcat 14402601  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  14402600 atagcttgccgttttccatgcgtattcatctc 14402569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 4002286 - 4002055
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |    
T  4002286 tgaaattcatcaaaacattacaaagtgtctataactaagtgtccataattaaataactcattacacatcattaaattaaatccctacttacattcaacac 4002187  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||  ||||||||||||||| ||| |||    
T  4002186 aattgcatatggaacgaacatacatatataatatattattttccaccattttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcat 4002087  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||||||||||||||| ||||||||||    
T  4002086 atagcttgtcgttttccatgcgtattcatctc 4002055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 36813129 - 36813360
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  36813129 tgaaattcattaaaacattacaaagtttccataattaattgtccataattaaacaactcattacacatcattaaattatatccctacttacattcaacgc 36813228  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  36813229 aattgcatatggaacgaacatacatatataatatattatattccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaagacat 36813328  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||  | ||||||||||    
T  36813329 atagcttgccgttttccacacgtattcatctc 36813360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 6489620 - 6489852
Alignment:
Q  18 tgaaattcatcaaaacgttacaaa-gtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacg 116  Q
    ||||||||||  |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||     
T  6489620 tgaaattcattgaaacgttacaaaagtgtccatacttaagtgtccataattaaacaactcattacacatcattaaattaaattcctacttacattcaaca 6489719  T
Q  117 caattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagaca 216  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||    
T  6489720 caattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaatataaatccgacgacgctatcgtcacgaataagccaaggca 6489819  T
Q  217 tatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||| |||||||||||| ||||| ||||    
T  6489820 tatagcttgccgttttccatgcgtattcgtctc 6489852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 50957438 - 50957243
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  50957438 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 50957339  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  50957338 tatcttccaccatattccgaaacaaaaatccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctc 50957243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 48246725 - 48246920
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||    
T  48246725 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcagttgcatatggaacaaacatacatatataatatat 48246824  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  48246825 tatcttccaccatattccgaaacataaatctgacgtcgccgtcgtcgcgaataagccaaagcatatagcttgtcgttttccatgcgtattcatctc 48246920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 2743769 - 2743964
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  2743769 aagtgttcataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatat 2743868  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  2743869 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 2743964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 9426919 - 9427114
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  9426919 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatat 9427018  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||| ||| |||||||||||| ||||||||||    
T  9427019 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagtttgccgttttccatgcgtattcatctc 9427114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 6745085 - 6744890
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  6745085 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 6744986  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||| ||  ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  6744985 tgtcttccaccatattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctc 6744890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 8156823 - 8157018
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  8156823 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 8156922  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  8156923 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 8157018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 13743580 - 13743775
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  13743580 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 13743679  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  13743680 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 13743775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 30943505 - 30943700
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  30943505 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 30943604  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  30943605 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 30943700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 2857741 - 2857546
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||    
T  2857741 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaatgaacatacatatataatatat 2857642  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| ||||| |||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  2857641 tattttccaccattttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 2857546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 3952973 - 3952778
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  3952973 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 3952874  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||| ||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  3952873 tgtcttccaccatattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3952778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 56 - 246
Target Start/End: Original strand, 21952115 - 21952305
Alignment:
Q  56 gtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatta 155  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||||||||| |||||||||||||  |||||||||| |    
T  21952115 gtgtccatgattaaacaactcattacacgtcattaaattaaatccctagttacattcaatgcaattgcatatggaacgaacatacaaatataatatatca 21952214  T
Q  156 tcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcat 246  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| || |||||||| |||||||||||| |||||||    
T  21952215 tcttccaccatattccgaaacctaaatccgacgtcgctatcatcgcgaataagccaaggcacatagcttgccgttttccatgcgtattcat 21952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 70 - 249
Target Start/End: Original strand, 67213 - 67392
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||| |||||| |||||| ||| ||||||||    
T  67213 acaactcattacacatcattaaatgaaatccctacttacattcaacgcaatcacatatggaacgaacatacatatataatgtattattttccaccatatt 67312  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||||||||||||||||||| |||   ||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  67313 ccgaaacataaatccgacgtcgctattgtctttaataagccaagacatatagcttgccgtttttcatgcgtattcatctc 67392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 7841409 - 7841474
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaa 119  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  7841409 aagtgtccataattaaacaactcattgcacatcattaaattaaatccctacttacattcaacgcaa 7841474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 3952995 - 3952958
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  3952995 tgaaattcatcaaaacattacaaagtgtccataattaa 3952958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6745107 - 6745070
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  6745107 tgaaattcatcaaaacattacaaagtgtccataattaa 6745070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 67165 - 67202
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  67165 tgaaattcatcaaaacggtacatagtgtccataattaa 67202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 35443508 - 35443568
Alignment:
Q  144 tataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaa 204  Q
    ||||||||||||| ||| ||||||| || |||||||||||| |||| | ||||||| ||||    
T  35443508 tataatatattattttcaaccatatgcctaaacataaatcctacgttgttatcgtcacgaa 35443568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 50113599 - 50113830
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  50113599 tgaaattcatcaaaacattacaaagtgtccataacaaagtgtccataattaaacaactcattacacattattaaattaaatccctacttacattcaacac 50113698  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  50113699 aattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcat 50113798  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  50113799 atagcttgccgttttccatgcgtattcatctc 50113830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 8459271 - 8459466
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8459271 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattacatatagaacgaacatacatgtataatatat 8459370  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8459371 tatcttctaccatattttgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcgtattcatctc 8459466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 40 - 249
Target Start/End: Original strand, 12643505 - 12643714
Alignment:
Q  40 aagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacata 139  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12643505 aagtgtctataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacata 12643604  T
Q  140 catgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgca 239  Q
    ||| ||||||||||||| ||| ||||||||| |||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| ||||||||||||     
T  12643605 catatataatatattattttccaccatattctgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcg 12643704  T
Q  240 tattcatctc 249  Q
    ||||||||||    
T  12643705 tattcatctc 12643714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 44469770 - 44469575
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  44469770 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 44469671  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  44469670 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 44469575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 37019155 - 37018960
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  37019155 aagtgtccataattaaacaactcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 37019056  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||    
T  37019055 tatcttccaccatattccgaaacataaatcctatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctc 37018960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 70 - 249
Target Start/End: Complemental strand, 1655823 - 1655644
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  1655823 acaactcattacacatcattaaattaaatcattacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatt 1655724  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  1655723 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgccgttttccatgcgtattcatctc 1655644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 6558215 - 6558410
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  6558215 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 6558314  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  6558315 tatcttccaccatattctgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 6558410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 9710891 - 9711086
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  9710891 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaaagaacatacatatataatatat 9710990  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||  |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||| ||||| ||||||||||    
T  9710991 tatctttcaccatattccgaaacataaatccgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctc 9711086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 29352547 - 29352742
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  29352547 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 29352646  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  29352647 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 29352742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 3944289 - 3944484
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  3944289 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 3944388  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  3944389 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3944484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 30909788 - 30909593
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  30909788 aagtgtccataattaaagtactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatat 30909689  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||  ||||||||||| ||||||||||    
T  30909688 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctc 30909593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 3993601 - 3993406
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  3993601 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 3993502  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||| ||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  3993501 tgtcttccaccatattccgaaacataaatctgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3993406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 5082123 - 5081928
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||  |||| |||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  5082123 aagtgtccataattaaagtactccttacacatcattaaattaaatccatatttacattcaacgcaattgcatatggaacgaacatacatatataatatat 5082024  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||    
T  5082023 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataccttgtcgttttccatgcgtattcatctc 5081928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 13633631 - 13633436
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||    
T  13633631 aagtgtccataattaaactactcattacacatcaataaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatat 13633532  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  13633531 tatcttccaccatattccgaaacataaatccgacgtcgccgtcatcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 13633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 54 - 248
Target Start/End: Complemental strand, 20353694 - 20353500
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  20353694 aagtgtccataattaaactactcattatacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 20353595  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatct 248  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| |||||||||    
T  20353594 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatct 20353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 46979039 - 46978798
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaac----------tcattacacatgattaaattaaatccctactta 107  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||          ||||||||||| |||| ||||||||||||||||    
T  46979039 tgaaattcatcaaaacattacaaagtgtccataattaagtgtccataattaaacaacacattacaattcattacacatcattatattaaatccctactta 46978940  T
Q  108 cattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataa 207  Q
    |||||| | |||||||||   |||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||   |||||    
T  46978939 cattcatcacaattgcattaggaacgaacatacatatataatatattattttccaccatatttcgaaacataaatccgacgtcgctatcgtctttaataa 46978840  T
Q  208 gccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||| |||||||||||||||||||||||  ||||||||||    
T  46978839 gccaaggcatatagcttgtcgttttccatgtgtattcatctc 46978798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 13177917 - 13177690
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacg 116  Q
    |||||||||||||||||||||| |||||||||| ||||    | | | |||  |||||||||||||||| |||||||||||||||||||||| ||||| |    
T  13177917 tgaaattcatcaaaacgttacatagtgtccatagttaa---acaacacatt--acaactcattacacattattaaattaaatccctacttactttcaatg 13177823  T
Q  117 caattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagaca 216  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  13177822 caattgcatatggaatgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgttgcgattaagccaagcca 13177723  T
Q  217 tatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||| |||||||||||| ||||||||||    
T  13177722 tatagcttgccgttttccatgcgtattcatctc 13177690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 38771945 - 38772140
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  38771945 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 38772044  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| ||||||||||||||||||||||||||||| |  |||||||| |||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  38772045 tgtcttccaccatattccgaaacataaatccgacgtcaccgtcgtcgcggataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 38772140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 51666425 - 51666230
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||    
T  51666425 aagtgtccataattaaacaactcattacacatcattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatat 51666326  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| ||||||||||||||||||||| ||||||||||||||||   ||||||||||| ||||||||||||||| |||||||  ||||||||||    
T  51666325 tattttccaccatattccgaaacataaattcgacgtcgctatcgtctttaataagccaaggcatatagcttgtcgtgttccatgtgtattcatctc 51666230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 19495382 - 19495544
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  19495382 acaagtcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttccaccatatt 19495481  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgtttt 232  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  19495482 ccgaaacataaatccaacgtcgctatcgtctcgaataagccaaggcatatagcttgccgtttt 19495544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 67 - 249
Target Start/End: Complemental strand, 25039827 - 25039645
Alignment:
Q  67 taaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccat 166  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||| |||||    
T  25039827 taaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgtatatggaacgaacatacacatataatatattatcttccaccat 25039728  T
Q  167 attccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  25039727 attccgaaacataaatccgacgtcgttatcgacgcgaataagccaaggcgtatagcttgccgttttccatgcgtattcatctc 25039645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 55 - 249
Target Start/End: Original strand, 7966298 - 7966497
Alignment:
Q  55 agtgtccataattaaacaactcattaca------catgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataa 148  Q
    |||||||||||||||||||| |||||||      ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||    
T  7966298 agtgtccataattaaacaacacattacatttacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatgtaa 7966397  T
Q  149 tatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatct 248  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||||||||    
T  7966398 tatattatcttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataag-caaggcatatagcttgccgttttccatgcgtattcatct 7966496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 70 - 247
Target Start/End: Original strand, 36072702 - 36072879
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  36072702 acaactcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatt 36072801  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatc 247  Q
    ||||||||||||||||||||||||||| ||   ||| ||||||| |||||||||||| ||||||||||| ||||||||    
T  36072802 ccgaaacataaatccgacgtcgctatcatcttcaattagccaaggcatatagcttgttgttttccatgcgtattcatc 36072879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 55 - 248
Target Start/End: Complemental strand, 5141628 - 5141435
Alignment:
Q  55 agtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatt 154  Q
    |||||| ||||||||||||| ||||| | ||  |||||||||||| ||||| |||||| |||||||||||||| |||||||||||||| |||||||||||    
T  5141628 agtgtcaataattaaacaacacattatatatcgttaaattaaatctctactgacattctacgcaattgcatatggaacgaacatacatatataatatatt 5141529  T
Q  155 atcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatct 248  Q
    |||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||    
T  5141528 atcttccatcatattccgaaacatacatctgacgtcgctatcgtcgcgaataagccaacgcatatagcttgccgttttccatgcgtattcatct 5141435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 70 - 249
Target Start/End: Original strand, 33168243 - 33168422
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||| ||| ||||||||    
T  33168243 acaactcattacatatcattaaattaaatccctacttacactcaacgcaattacatatggaacgaacatacatatataatatattattttccaccatatt 33168342  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||||||| |||||||||||||||   |||||| |||| |||||||||||| ||||||||||| ||||||||||    
T  33168343 ccgaaacataaatctgacgtcgctatcgtctaaaataagtcaaggcatatagcttgttgttttccatgcgtattcatctc 33168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 38690223 - 38690417
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||||| | ||||||||||| |||| ||||||||| ||||||||||    
T  38690223 aagtgtccataattaaacaacacattacacatcattatattaaatcc-tacttacattcatcacaattgcatatggaacaaacatacatatataatatat 38690321  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| ||||||||  ||||||||||||||||||||||||||||   ||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  38690322 tattttccaccatattttgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 38690417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 4518197 - 4517959
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaac----------tcattacacatgattaaattaaatccctactta 107  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||          ||||||||||| |||| ||  ||||||||||||    
T  4518197 tgaaattcatcagaacgttacaaaatgtccataattaagtgtccataattaaacaacacattacaactcattacacatcattatat--aatccctactta 4518100  T
Q  108 cattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataa 207  Q
    |||||| | ||||||||||| |||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||| ||||| |||   |||||    
T  4518099 cattcatcacaattgcatatggaacgaacatacatatataatatattatttttcaccatattccgaaacataaatccgacgttgctatagtctttaataa 4518000  T
Q  208 gccaagacatatagcttgtcgttttccatgcatattcatct 248  Q
    |||||| ||||||||||| | |||||||||| |||||||||    
T  4517999 gccaaggcatatagcttgccattttccatgcgtattcatct 4517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 15051107 - 15051053
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttac 108  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  15051107 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttac 15051053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 3993623 - 3993586
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  3993623 tgaaattcatcaaaacattacaaagtgtccataattaa 3993586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5082145 - 5082108
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5082145 tgaaattcatcaaaacattacaaagtgtccataattaa 5082108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 7966275 - 7966312
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7966275 tgaaattcatcaaaacgttacatagtgtccataattaa 7966312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 13633653 - 13633616
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  13633653 tgaaattcatcaaaacattacaaagtgtccataattaa 13633616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15051129 - 15051092
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  15051129 tgaaattcatcaaaacattacaaagtgtccataattaa 15051092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 20353716 - 20353679
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  20353716 tgaaattcatcaaaacattacaaagtgtccataattaa 20353679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 30909810 - 30909773
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  30909810 tgaaattcatcaaaacattacaaagtgtccataattaa 30909773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 37019177 - 37019140
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  37019177 tgaaattcatcaaaatgttacaaagtgtccataattaa 37019140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 44469792 - 44469755
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  44469792 tgaaattcatcaaaacattacaaagtgtccataattaa 44469755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 51666447 - 51666410
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  51666447 tgaaattcatcaaaaagttacaaagtgtccataattaa 51666410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 33168195 - 33168232
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  33168195 tgaaaatcatcaaaacgttacatagtgtccataattaa 33168232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 19044584 - 19044815
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  19044584 tgaaattcatcaaaacattacaaagtgtccataattaagtgtccataattaaacaaatcattacacatcattaaattaaatctctacttacattcaacgc 19044683  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||    
T  19044684 aattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcat 19044783  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    ||| |||| |||||||||||||||||| ||||    
T  19044784 ataacttgccgttttccatgcatattcttctc 19044815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 20710052 - 20709821
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  20710052 tgaaattcatcaaaacattacaaagtgtccataattaagtgtccataattaaacaaatcattacacatcattaaattaaatctctacttacattcaacgc 20709953  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||    
T  20709952 aattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcat 20709853  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    ||| |||| |||||||||||||||||| ||||    
T  20709852 ataacttgccgttttccatgcatattcttctc 20709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 47742748 - 47742553
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  47742748 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 47742649  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  47742648 tatcttccaccatattccgaaacataaatccgacgtcgccatcgtcgcgaataagccaaggcatatagcttgtcgttttccatgcgtattcatctc 47742553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 15070109 - 15069914
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  15070109 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 15070010  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  15070009 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 15069914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 18109552 - 18109357
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  18109552 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 18109453  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  18109452 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 18109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 47065089 - 47064858
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  47065089 tgaaattcatcaaaatgttacaaagtatccataattaaatgtccataattaaacaactcattacacatgattatattaaatccctacttacattcatcac 47064990  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||  |||||||||||| ||   ||||| ||||| |||    
T  47064989 aattgcatatggaacgaacatacatatataatatattattttccaccatatttcgaaacataaatttgacgtcgctatcatctttaataaaccaaggcat 47064890  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  47064889 atagcttgccgttttccatgcgtattcatctc 47064858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 604093 - 604288
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||    
T  604093 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatat 604192  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  604193 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 604288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 42503597 - 42503402
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  42503597 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatat 42503498  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||| ||||||| |||||||||||| ||||||||||    
T  42503497 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatgtagcttgccgttttccatgcgtattcatctc 42503402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 54 - 244
Target Start/End: Original strand, 34622812 - 34623002
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  34622812 aagtgtccataattaaacaactcattacacatcattaaattaaacttctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatat 34622911  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattc 244  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  34622912 tatcttccatcatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc 34623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 43619994 - 43620189
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  43619994 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 43620093  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  43620094 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 43620189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 45767619 - 45767424
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  45767619 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 45767520  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  45767519 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 45767424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 30790765 - 30790570
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  30790765 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 30790666  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||  ||||||||||| ||||||||||    
T  30790665 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctc 30790570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 10705541 - 10705765
Alignment:
Q  20 aaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacgca 118  Q
    ||||||||||||| |||||| |||||||||||||||    | ||| ||||  ||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  10705541 aaattcatcaaaatgttacatagtgtccataattaaa---caatacatta--caactcattacacatcaataaattaaatctctacttacattcaacgca 10705635  T
Q  119 attgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacata 218  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||   ||| ||||||| ||||    
T  10705636 attgcatatagaacgaacatacatatataatatatcatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattagccaaggcata 10705735  T
Q  219 tagcttgtcgttttccatgcatattcatct 248  Q
    |||||||||||||||||||| |||||||||    
T  10705736 tagcttgtcgttttccatgcgtattcatct 10705765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 77 - 249
Target Start/End: Original strand, 29592839 - 29593011
Alignment:
Q  77 attacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaac 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||||||||||    
T  29592839 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatgtattatcttccaccatattccgaaac 29592938  T
Q  177 ataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||| |||||||||||||| |||||| |||| |||||||||||| ||||||||||    
T  29592939 ataaatctgacgtcgctatcgttgcgaataagccaaggcatataacttgccgttttccatgcgtattcatctc 29593011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 246
Target Start/End: Original strand, 12111509 - 12111729
Alignment:
Q  20 aaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacgca 118  Q
    |||||||||||||||||| ||| |||||||||||||    | ||| ||||  |||||||||||| || ||||||||||||||||||||||||||| | ||    
T  12111509 aaattcatcaaaacgttataaattgtccataattaaa---caatacatta--caactcattacatatcattaaattaaatccctacttacattcatcaca 12111603  T
Q  119 attgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacata 218  Q
    ||||||||| |||||||||||||| ||||  ||||||| ||| |||||||||||||| |||||||||||||||||||| ||   ||||| ||||| ||||    
T  12111604 attgcatatggaacgaacatacatatata--atattattttccaccatattccgaaatataaatccgacgtcgctatcatctttaataaaccaaggcata 12111701  T
Q  219 tagcttgtcgttttccatgcatattcat 246  Q
    |||||||||||||||||||  |||||||    
T  12111702 tagcttgtcgttttccatgtgtattcat 12111729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 47742770 - 47742733
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47742770 tgaaattcatcaaaacgttacaaagtgtccataattaa 47742733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15070131 - 15070094
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  15070131 tgaaattcatcaaaacattacaaagtgtccataattaa 15070094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18109574 - 18109537
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  18109574 tgaaattcatcaaaacattacaaagtgtccataattaa 18109537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 30790787 - 30790750
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  30790787 tgaaattcatcaaaacattacaaagtgtccataattaa 30790750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 42503619 - 42503582
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  42503619 tgaaattcatcaaaacattacaaagtgtccataattaa 42503582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 45767641 - 45767604
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  45767641 tgaaattcatcaaaacattacaaagtgtccataattaa 45767604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 24601931 - 24602160
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24601931 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgc 24602030  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| ||||||||||  || ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||    
T  24602031 aattgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatccgacgttgctatcgtcgcgaataagccaaggcat 24602128  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||| | ||||| ||||    
T  24602129 atagcttgccgttttccatccgtattcgtctc 24602160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 24612183 - 24611954
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24612183 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgc 24612084  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| ||||||||||  || ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||    
T  24612083 aattgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatccgacgttgctatcgtcgcgaataagccaaggcat 24611986  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||| | ||||| ||||    
T  24611985 atagcttgccgttttccatccgtattcgtctc 24611954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 1096861 - 1097092
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  1096861 tgaaattcatcaaaacgttacaaagtgtccataattaagtgttcataattaaacaactcattacatatcattaaattaaatccctacttacattcaacgc 1096960  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |  |||    
T  1096961 aattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaattcgacgtcgctatcgtcgcaaataagcccaagcat 1097060  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    ||| |||| |||||||||||| ||||| ||||    
T  1097061 ataacttgccgttttccatgcgtattcgtctc 1097092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 9659837 - 9659604
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  9659837 tgaaattcatcaaaacgttacacagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatacctacttacattcaacgc 9659738  T
Q  118 aattgcatatagaacgaacatac--atgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagac 215  Q
    |||||||||| ||||||||||||  || || |||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||||||||||||| |    
T  9659737 aattgcatattgaacgaacatacaaatataaaatatattatcttccaccatattccgaaacataaactcgacgtcgctatcgtcacgaataagccaaggc 9659638  T
Q  216 atatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||| |||||||||||| ||||| ||||    
T  9659637 atatagcttgccgttttccatgcgtattcgtctc 9659604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 82045 - 81814
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||||||| | |    
T  82045 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtgcataattaaacaactcattacacatgattatattaaatgcatacttacattcatcac 81946  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||   |||||| ||||  ||    
T  81945 aattgcatatggaacgaacatacatatataatatattattttcaaccatattccgaaacataaatccgacgtcgttatcgtctttaataagtcaagggat 81846  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  81845 atagcttgccgttttccatgcgtattcatctc 81814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 439605 - 439374
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |    
T  439605 tgaaattcatcaaagcgttacaaagtatccataattaagtgttcataattaaacaactcattacacatgattatattaaatccctccttacattcatcac 439506  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||   ||||||||| | |||    
T  439505 aattgcatatggaacgaacatacatatataatatattactttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataagccagggcat 439406  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  439405 atagcttgccgttttccatgcgtattcatctc 439374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 41052913 - 41053142
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||     ||||||||||||||| ||    
T  41052913 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaattcattacacatcattaaatt-----cctacttacattcaatgc 41053007  T
Q  118 aattgcatata--gaacgaacatacatgtataa-tatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaga 214  Q
    |||||||||||  ||||||||| |||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41053008 aattgcatatatggaacgaacacacatatataaatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagg 41053107  T
Q  215 catatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||||| ||||||| |||| ||||| ||||    
T  41053108 catatagcttggcgttttcaatgcgtattcgtctc 41053142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 41181724 - 41181919
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  41181724 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatat 41181823  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||| ||||| ||||    
T  41181824 tatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgtataagccaatgcatatagcttgccgttttccatgcgtattcgtctc 41181919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 55 - 249
Target Start/End: Complemental strand, 45479579 - 45479385
Alignment:
Q  55 agtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatt 154  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  45479579 agtgtccataattaaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatatt 45479480  T
Q  155 atcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  45479479 atcttccaccatattctgaaacataaatccgacgccgatatcgtcgcgaataagccaaggcatatagcttgccgttttccatgtgtattcatctc 45479385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 3795664 - 3795859
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  3795664 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 3795763  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| ||||||||| |||||||||||||||||||||  ||||| ||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  3795764 tatcttccaccatattctgaaacataaatccgacgtcgccgtcgtcacgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3795859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 7267203 - 7267008
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  7267203 aagtgtccataattaaactactcattacacatcattaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatat 7267104  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||    
T  7267103 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggtatatagcttgtcgttttccatgcgtattcatctc 7267008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 70 - 248
Target Start/End: Original strand, 12905859 - 12906037
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||    
T  12905859 acaactcattacacatcattaaattaaatccgtacttacattcaacgcaattgcatatggaacaaacatacatatataatatattatcttccaccatatt 12905958  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatct 248  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  12905959 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgttgttttccatgcgtattcatct 12906037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 54 - 237
Target Start/End: Original strand, 28342836 - 28343020
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  28342836 aagtgttcataattaaacaattcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 28342935  T
Q  154 tatcttctaccatattccg-aaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatg 237  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  28342936 tatcttccaccatattccgaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttacatg 28343020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 5351490 - 5351295
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  5351490 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 5351391  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  5351390 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 5351295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 10620288 - 10620483
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  10620288 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 10620387  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  10620388 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 10620483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 39798195 - 39798004
Alignment:
Q  58 gtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatc 157  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  39798195 gtccataattaaactactcattacacatcattaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatc 39798096  T
Q  158 ttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  39798095 ttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 39798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 41564249 - 41564054
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  41564249 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 41564150  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  41564149 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 41564054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 209299 - 209494
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  209299 aagtgtccataattaaactactcattacacatcattaaattaaatccatacttacattcaatgcaattacatatggaacgaacatacatatataatatat 209398  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  209399 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 209494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 24753783 - 24753588
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  24753783 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacaaacatacatatataatatat 24753684  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| ||||||||||||||||||||| ||| |||||  ||||||||||||||| ||  ||||||||||| |||||||||| | ||||||||||    
T  24753683 tattttccaccatattccgaaacataaatacgatgtcgccgtcgtcgcgaataagcaaaagcatatagcttgccgttttccatacgtattcatctc 24753588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 70 - 249
Target Start/End: Original strand, 43944031 - 43944210
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||    
T  43944031 acaattcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatatattatattatcttccaccatatt 43944130  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||||||| |||||||||||| |||||||||||||||  ||||||||||| |||||||||||| ||||||||||    
T  43944131 ccgaaacataaatctgacgtcgctatcatcgcgaataagccaatgcatatagcttgccgttttccatgcgtattcatctc 43944210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 1150783 - 1150595
Alignment:
Q  61 cataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttc 160  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| | |||||||||| |||||||||||||| ||||||||| |||||||    
T  1150783 cataattaaacaattcattacacatcattaaattaaatcactacttacattcaatgaaattgcatatggaacgaacatacatatataatatagtatcttc 1150684  T
Q  161 taccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
     | |||||||| ||||||||||||||||||||||||||| | ||||| ||||| | ||||| ||| |||||||||||| |||| |||||    
T  1150683 catcatattccaaaacataaatccgacgtcgctatcgtcacaaataaaccaaggcgtatagtttgccgttttccatgcgtatttatctc 1150595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 41004818 - 41005045
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacg 116  Q
    ||||||||||||||||||||||||||||||||||||||    | | | ||||  ||||||||||||||| |||| |||||||| ||||||||||||| |     
T  41004818 tgaaattcatcaaaacgttacaaagtgtccataattaaa---caacacatta--caactcattacacatcattatattaaatcactacttacattcatca 41004912  T
Q  117 caattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagaca 216  Q
    ||||||||||| ||| |||||||||| |||||||||| || ||  | ||||||| |||||||||||| |||||| | ||||||   ||||||||| | ||    
T  41004913 caattgcatatggaatgaacatacatatataatatataatttttcaacatattctgaaacataaatctgacgtcccaatcgtctttaataagccagggca 41005012  T
Q  217 tatagcttgtcgttttccatgcatattcatctc 249  Q
    | |||||||||||||||||||| ||||||||||    
T  41005013 tgtagcttgtcgttttccatgcgtattcatctc 41005045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 38949855 - 38949750
Alignment:
Q  144 tataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatatt 243  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||| |||| |||||||||||| ||||    
T  38949855 tataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgccgttttccatgcgtatt 38949756  T
Q  244 catctc 249  Q
    ||||||    
T  38949755 catctc 38949750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 38950325 - 38950232
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtata 147  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||    
T  38950325 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacacaattacatatggaacgaacatacatatata 38950232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 18000547 - 18000607
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaa 114  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18000547 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaa 18000607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 25613526 - 25613697
Alignment:
Q  64 aattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctac 163  Q
    |||||| |||| ||||||| || |||| || ||||| ||| | |||||| | |||  |||| || ||||||||| | |  ||||||||||||||||  |     
T  25613526 aattaatcaacacattacatatcattacataaaatctctattgacattctatgcacatgcagatggaacgaacacaaagatataatatattatctttaat 25613625  T
Q  164 catattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttcca 235  Q
     ||||||  |||||||||||| |||||||||||||| |||||||| |||| || |||||| | |||||||||    
T  25613626 tatattcataaacataaatcctacgtcgctatcgtcacgaataagtcaaggcacatagctcgccgttttcca 25613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 43668500 - 43668560
Alignment:
Q  144 tataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaa 204  Q
    ||||||||||||||||| ||||||| || |||||||||||| ||||| |||||||| ||||    
T  43668500 tataatatattatcttcaaccatatgcctaaacataaatcctacgtcactatcgtcacgaa 43668560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5351512 - 5351475
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5351512 tgaaattcatcaaaacattacaaagtgtccataattaa 5351475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 7267225 - 7267188
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  7267225 tgaaattcatcaaaacattacaaagtgtccataattaa 7267188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 24753805 - 24753768
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  24753805 tgaaattcatcaaaacattacaaagtgtccataattaa 24753768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 38950347 - 38950310
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  38950347 tgaaattcatcaaaacattacaaagtgtccataattaa 38950310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 41564271 - 41564234
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  41564271 tgaaattcatcaaaacattacaaagtgtccataattaa 41564234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 49
Target Start/End: Original strand, 43943983 - 43944014
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccat 49  Q
    ||||||||||||||||||||||||||||||||    
T  43943983 tgaaattcatcaaaacgttacaaagtgtccat 43944014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12905811 - 12905848
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  12905811 tgaaattcatcaaaacgttacatagtgtcaataattaa 12905848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 7e-95; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 2124472 - 2124703
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  2124472 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaagtccctacttacattcaacgc 2124571  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||| ||| |||    
T  2124572 aattgcatatggaacgaaaatacatatataatatattatcttccaccatattccgaaacataaatccaaagtcgctattgtcgcgaataagcaaaggcat 2124671  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||| ||||    
T  2124672 atagcttgccgttttccatgcgtattcgtctc 2124703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 43377074 - 43376843
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  43377074 tgaaattcatcaaaacgttacaaagtgtccttaattaagtgtccataattaaacaactcattacacatcattaaattaaattcctacttacattcaacgc 43376975  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| ||||  |||    
T  43376974 aattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcactatcgtcgcgaataaaccaatgcat 43376875  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||| ||||    
T  43376874 atagcttgccgttttccatgcgtattcgtctc 43376843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 31959842 - 31959611
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  31959842 tgaaattcatcaaaacattacaaagtgtccataattaattgtccataattaaacaactcattacacatcattaaattaaatccatacttacattcaacgc 31959743  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||| |||    
T  31959742 aattgcatatggaacgaacatacatatataatatattattttccaccatattccaaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcat 31959643  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  31959642 atagcttgccgttttccatgcgtattcatctc 31959611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 35962621 - 35962816
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  35962621 aagtgtgcataattaaacaactcattgcacatcattaaattaaattcctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatat 35962720  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  35962721 tatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgtcgttttccatgcgtattcatctc 35962816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 39771 - 39966
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  39771 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 39870  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| |||||||||||||||||||||||||| ||||  |||| |||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  39871 tattttccaccatattccgaaacataaatccgacatcgccgtcgttgcgaataagcaaagacatatagcttgtcgttttccatgcgtattcatctc 39966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 22588201 - 22588006
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22588201 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatat 22588102  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||| | |||||||||||||||||||||||||||   ||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  22588101 tatcttccaccatatttcaaaacataaatccgacgtcgctatcgtcttcaattagccaagacatatagcttgccgttttccatgcgtattcatctc 22588006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 23924279 - 23924474
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  23924279 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaactgcatatggaacgaacatacatatataatatat 23924378  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  23924379 tattttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 23924474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 30301449 - 30301644
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  30301449 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 30301548  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  30301549 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 30301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 32375966 - 32376161
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  32375966 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 32376065  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||||||    
T  32376066 tgtcttccaccatattccgaaacataaatccgacgtcgccatcgtcgcgaataagcaaaggcatatagcttgccgtttcccatgcgtattcatctc 32376161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 7344315 - 7344120
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  7344315 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 7344216  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||| ||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  7344215 tgtcttccaccatattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 7344120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 8419719 - 8419914
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||| ||||||||||    
T  8419719 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacgtacatatataatatat 8419818  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  8419819 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 8419914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 7172108 - 7171881
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacg 116  Q
    |||||||||| ||||||||||| |||||||||||||||    | | | |||  |||||||| ||||||| ||||||||||||| |||||||||||||| |    
T  7172108 tgaaattcatgaaaacgttacatagtgtccataattaa---acaacacatt--acaactcagtacacatcattaaattaaatctctacttacattcaatg 7172014  T
Q  117 caattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagaca 216  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  7172013 caattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggca 7171914  T
Q  217 tatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||| | |||||||||| ||||||||||    
T  7171913 tatagcttgccattttccatgcgtattcatctc 7171881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 77 - 249
Target Start/End: Original strand, 41744160 - 41744332
Alignment:
Q  77 attacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaac 176  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||| ||||||||||||||     
T  41744160 attacacatcattaaattaagtccctacttacattcaacgcaattgcatatggagcgaatatacatatataatatattatcttccaccatattccgaaat 41744259  T
Q  177 ataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  41744260 ataaatccgacgtcgctatcgtcatgaataagccaaggcatataacttgtcgttttccatgcgtattcatctc 41744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 55 - 249
Target Start/End: Complemental strand, 22661332 - 22661138
Alignment:
Q  55 agtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatt 154  Q
    |||||||||||||||||||| ||||||| ||  |||||||||||| ||||| ||||||  |||| |||||||| |||||||||||||| ||||||||||     
T  22661332 agtgtccataattaaacaacacattacatatcgttaaattaaatctctactgacattctgcgcagttgcatatggaacgaacatacatatataatatatc 22661233  T
Q  155 atcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||| |||||||||||||||||| | |||||||||||||||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  22661232 atcttccaccatattccgaaacatagacccgacgtcgctatcgtcgtgaataagccaaggcatatggcttgccgttttccatgcatattcatctc 22661138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 43679710 - 43679905
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||| |||||||||| | ||||||||||| |||||||||||||| ||||||||||    
T  43679710 aagtgttcataattaaacaactcattacacatcattatattaaatccctgcttacattcatcacaattgcatatggaacgaacatacatatataatatat 43679809  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| |||||||||||||||||||||| |||||| ||||||||   |||||| |||| |||||| ||||||||||||||||| | ||||||||    
T  43679810 tattttccaccatattccgaaacataaatctgacgtctctatcgtctttaataagtcaaggcatataacttgtcgttttccatgcgtgttcatctc 43679905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 70 - 212
Target Start/End: Complemental strand, 4867536 - 4867394
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatatt 169  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||||||| ||| |||||| |    
T  4867536 acaactcattacttatcattaaattaaatccctacttacattcaacgcaattggatatggaacgaacatacgtatataatatattattttccaccataat 4867437  T
Q  170 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa 212  Q
    |||||||||||||||||||||| |||| || ||||||||||||    
T  4867436 ccgaaacataaatccgacgtcgttatcatctcgaataagccaa 4867394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 39751659 - 39751758
Alignment:
Q  145 ataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattc 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  39751659 ataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagtttgccgttttccatgcgtattc 39751758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 39751374 - 39751473
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  39751374 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgtaattgcatatggaacgaacatacatatataatatat 39751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 20549018 - 20548938
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacga 134  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  20549018 aagtgtccataattaaacaactcattacacatcattaaattaaatccttacttacattcaacgcaattgcatatggaacga 20548938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 31281179 - 31281282
Alignment:
Q  107 acattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaata 206  Q
    |||||| |||||  |||| || ||||||||||| |  ||||||||||||||||| ||||||||| ||||||||||||| ||||  |||||||| ||||||    
T  31281179 acattctacgcacgtgcagatggaacgaacataaagatataatatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaata 31281276  T
Q  207 agccaa 212  Q
    ||||||    
T  31281277 agccaa 31281282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 30972626 - 30972519
Alignment:
Q  61 cataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttc 160  Q
    |||||||||||||| |||||||||| |||| || ||||  |||   |||||| |||||  |||| || |||| |||| |||| |||||||||||||||||    
T  30972626 cataattaaacaacacattacacatcattacataaaatatctatcgacattctacgcatgtgcaaatggaacaaacacacatatataatatattatcttc 30972527  T
Q  161 taccatat 168  Q
     |||||||    
T  30972526 aaccatat 30972519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 7344337 - 7344300
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  7344337 tgaaattcatcaaaacattacaaagtgtccataattaa 7344300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 20549040 - 20549003
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  20549040 tgaaattcatcaaaacattacaaagtgtccataattaa 20549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 22588223 - 22588186
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22588223 tgaaattgatcaaaacgttacaaagtgtccataattaa 22588186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 7537478 - 7537709
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  7537478 tgaaattcatctaaacattacaaagtgtccataattaagtgtccataattaaacaaatcattgcacatcattaaattaaatccctacttacattcaacgc 7537577  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    || ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7537578 aaatgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcat 7537677  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||||  ||||||||||| ||||| ||||    
T  7537678 ataacttgctgttttccatgcgtattcgtctc 7537709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 2051319 - 2051545
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    ||||||||||||||||| || |||||||  |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2051319 tgaaattcatcaaaacgataaaaagtgttaataattaagtgttcataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgc 2051418  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  2051419 aattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatccgacgtcgccatcgtcgcgaataagccaagacat 2051518  T
Q  218 atagcttgtcgttttccatgcatattc 244  Q
    ||| |||| |||||||||||| |||||    
T  2051519 ataacttgccgttttccatgcgtattc 2051545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 55 - 249
Target Start/End: Original strand, 23959205 - 23959399
Alignment:
Q  55 agtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatt 154  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23959205 agtgtccataattaaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatt 23959304  T
Q  155 atcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  23959305 atcttacaccatattccgaaacataaatccaacgtcgctatcgtcgtgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 23959399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 28362512 - 28362281
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| || |    
T  28362512 tgaaattcaacaaaacgttacaaagtgttcataattaaatgtccatcattaaacaactcattacacatcattaaattaaatccctacatacattctacac 28362413  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||| ||||||||||| |||    
T  28362412 aattgcatatcgatcgaacatacatatataatatattatcttccaccatattctgaaacataaattcgacgtcgctatcatcgcaaataagccaaggcat 28362313  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| | |||||||||| ||||||||||    
T  28362312 atagcttgccattttccatgcttattcatctc 28362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 13382955 - 13383150
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  13382955 aagtgtccataattaaactactcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 13383054  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||| |||| |||||||||||| ||||||||||    
T  13383055 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgacgttttccatgcgtattcatctc 13383150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 29286516 - 29286695
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  29286516 aagtgtccataattaaacaactcattacacatcattaaattaaacctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 29286615  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttc 233  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  29286616 tatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttttc 29286695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 31150824 - 31150629
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || | ||||||||| ||||||||||    
T  31150824 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacatacattcaacgcaattgcatatcgatcaaacatacatatataatatat 31150725  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||    
T  31150724 tatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccaagcgtattcatctc 31150629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 54 - 237
Target Start/End: Complemental strand, 25140865 - 25140681
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacataca-tgtataatata 152  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  25140865 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacattatataatata 25140766  T
Q  153 ttatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatg 237  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  25140765 ttatctttcaccatattccgaaacataaatgcgacgtcgctatcgtcacgaataagccaaggcatatagcttgccgttttccatg 25140681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 1608608 - 1608803
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  1608608 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 1608707  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  1608708 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 1608803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 18609992 - 18609797
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||    
T  18609992 aagtgtccataattaaacaactcattacacatgattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatat 18609893  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
     || ||| ||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||| |||||||||||||||||||||| |||||    
T  18609892 aattttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatataacttgtcgttttccatgcatatttatctc 18609797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 29667614 - 29667387
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacg 116  Q
    |||||||||||||||||||||| |||||||||||||||    | | | ||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  29667614 tgaaattcatcaaaacgttacacagtgtccataattaaa---caacacatta--caactcattacacatcattaaattaaatccctacttacattcaacg 29667520  T
Q  117 caattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagaca 216  Q
    ||||||||||| |||||||||||||| |||||||||||| |||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||    
T  29667519 caattgcatatggaacgaacatacatatataatatattaacttccaccatattccgaaacataaatctgacatcgctatcgtcacgaataagccaaggca 29667420  T
Q  217 tatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||| |||||||||||| ||||||||||    
T  29667419 tatagcttgccgttttccatgcgtattcatctc 29667387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 55 - 249
Target Start/End: Original strand, 2259400 - 2259593
Alignment:
Q  55 agtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatt 154  Q
    |||||||||||||||||||| |||||||  | |||||||||||||| ||||||||||||||| | |||||||| |||| ||||| ||| |||||||||||    
T  2259400 agtgtccataattaaacaacacattacaacttattaaattaaatccttacttacattcaacgta-ttgcatatggaacaaacatgcatatataatatatt 2259498  T
Q  155 atcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    || ||| |||||||| ||||||||||||| ||||||||| |||||   ||||||||||  ||||||||||||||||||| |||| ||||||||||    
T  2259499 attttccaccatatttcgaaacataaatctgacgtcgctttcgtctttaataagccaatgcatatagcttgtcgttttctatgcgtattcatctc 2259593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 55 - 213
Target Start/End: Original strand, 34230795 - 34230953
Alignment:
Q  55 agtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatt 154  Q
    |||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||||| || || ||||| || |||||||||||||| |||||||||||    
T  34230795 agtgtccataattaaacaacacattacacatcgttaaattaaatctctactaacattctacacagttgcagatggaacgaacatacatatataatatatt 34230894  T
Q  155 atcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaag 213  Q
    ||||||||||||||||  ||||||||||| |||||| ||||| ||  ||||||||||||    
T  34230895 atcttctaccatattctaaaacataaatcggacgtcactatcctcttgaataagccaag 34230953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 18351402 - 18351348
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttac 108  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  18351402 aagtgtccataattaaactacttattacacatcattaaattaaatccctacttac 18351348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 213
Target Start/End: Complemental strand, 20448545 - 20448388
Alignment:
Q  55 agtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatt 154  Q
    |||||||||||||||||||| |||| || || |||| || ||||  |||   |||||| || || ||||| ||  ||| |||| |||| |||||||||||    
T  20448545 agtgtccataattaaacaacacatttcatatcattacataaaatatctatcgacattctacacatttgcaaatgtaacaaacacacatatataatatatt 20448446  T
Q  155 atcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaag 213  Q
    |||||| || |||| || ||||||||||   |||||||||||||| |||||||||||||    
T  20448445 atcttcaac-atatacctaaacataaatgaaacgtcgctatcgtcacgaataagccaag 20448388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18610014 - 18609977
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18610014 tgaaattcatcaaaacgttacaaagtgtccataattaa 18609977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 26702493 - 26702456
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26702493 tgaaattcatcaaaacgttacaaagtgtccataattaa 26702456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 31150846 - 31150809
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31150846 tgaaattcatcaaaacgttacaaagtgtccataattaa 31150809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 19129562 - 19129644
Alignment:
Q  133 gaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagac 215  Q
    ||||| |||| ||||||||||||| ||| | ||||| || ||||||||||   ||||||| |||||| |||||||||||||||    
T  19129562 gaacacacatatataatatattatattcaatcatatgcctaaacataaatgaaacgtcgcaatcgtcacgaataagccaagac 19129644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18351424 - 18351387
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  18351424 tgaaattcatcaaaacattacaaagtgtccataattaa 18351387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25140887 - 25140850
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25140887 tgaaattcatcaacacgttacaaagtgtccataattaa 25140850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 22692 - 22923
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22692 tgaaattcatcaaaacattacaaagtgttcataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgc 22791  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    ||||||| || |||||||||||||| ||||||||| ||| ||| ||||||||| |||||||||||||||||||||  ||||||| ||||||| ||| |||    
T  22792 aattgcaaatggaacgaacatacatatataatataatattttccaccatattctgaaacataaatccgacgtcgccgtcgtcgcaaataagcaaaggcat 22891  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  22892 atagcttgccgttttccatgcgtattcatctc 22923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 7796891 - 7797086
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  7796891 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 7796990  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||| ||||    
T  7796991 tatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctc 7797086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 34122816 - 34123047
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||    
T  34122816 tgaaattcatcaaaaggttacaaggtgttcataattaagtgtccataattaaacaactcattacacatcattaaattaaattcatacttacattcaatgc 34122915  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| ||||||||||| || ||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||    
T  34122916 aattgcatatggaacgaacatatatatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcat 34123015  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    ||| |||  |||||||||||| ||||||||||    
T  34123016 ataacttaccgttttccatgcgtattcatctc 34123047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 13563955 - 13564150
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  13563955 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggatcgaacatacatatataatatat 13564054  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  13564055 tatcttccaccatattccgaaacataaatccgacgtcgctatcatcgcaaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 13564150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 27863717 - 27863912
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||    
T  27863717 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatatat 27863816  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||| ||||| ||||||||||    
T  27863817 tatcttccaccatattccaaaacataaatccgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctc 27863912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 1039586 - 1039356
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  1039586 tgaaattcatcaaaacattacaaagtgtctataattaagtgtcaataatttaacaactcattacatatcattaaattaaatccctacttacattcaacgc 1039487  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    || ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||| |||||||||||||| |||||  ||||||||||||||| ||| |||    
T  1039486 aactgcatatggtacgaacatacatatataacatattattttccaccatattcc-aaacataaatccgatgtcgccgtcgtcgcgaataagcaaaggcat 1039388  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||| |||||||||||| ||||||||||    
T  1039387 atagcttgccgttttccatgcgtattcatctc 1039356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 38856029 - 38856224
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  38856029 aagtgtccataattaaactactcattacacatcattaaattcaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatat 38856128  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  38856129 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 38856224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 14280737 - 14280542
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  14280737 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 14280638  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  14280637 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 14280542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 28882302 - 28882497
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  28882302 aagtgtccataattaaactactcattacacatcattaaattaaatccccacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 28882401  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||| ||||||| ||  ||||||||||| |||||||||||| ||||||||||    
T  28882402 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcaaataagcaaatgcatatagcttgccgttttccatgcgtattcatctc 28882497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 37814896 - 37815091
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||    
T  37814896 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttactttcaacgcaattacatatggaacgaacatacatatataatatat 37814995  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||| |||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  37814996 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgtgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 37815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 11029325 - 11029516
Alignment:
Q  58 gtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatc 157  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| ||||||||||||||    
T  11029325 gtccataattaaactactcatcacacatcattaaattaaatccctacttacattcaacgcaattacatatgaaacgaacatacatatataatatattatc 11029424  T
Q  158 ttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  11029425 ttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 11029516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 25877910 - 25878089
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  || | |    
T  25877910 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacgtgattatattaaatccctacttaca--catcac 25878007  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtc 199  Q
    |||||||||| |||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  25878008 aattgcatatggaacaaacatacatatataatatattattttccaccatattccgaaacataaatccgacgtcgctatcgtc 25878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 67 - 249
Target Start/End: Complemental strand, 33994895 - 33994713
Alignment:
Q  67 taaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccat 166  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||    
T  33994895 taaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 33994796  T
Q  167 attccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||| ||||||||||    
T  33994795 attaagaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttgtccatgcgtattcatctc 33994713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 24053445 - 24053672
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||| |||||||||||||||     ||  ||   |||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  24053445 tgaaattcatcaaaacgttacatagtgtccataattaaa----caacatattacaactcattacacatcattaaattatatccctaattacattcaacgc 24053540  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||||||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||   |||  |||||| |||    
T  24053541 aattgcatatagaaagaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattcgccaaggcat 24053640  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||||||||||||||| ||||||||||    
T  24053641 atagcttgtcgttttccatgcgtattcatctc 24053672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 4196830 - 4197023
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||||| |||||||  ||||| ||||||||||    
T  4196830 aagtgtccataattaaacaactcattacatatgattatattaaatccctacttacattcatcacaattgcatatggaacgaa--tacatatataatatat 4196927  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| |||||||||||||||||||||| |||||||||||||||   ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4196928 tattttcgaccatattccgaaacataaatctgacgtcgctatcgtctttaataagccaaggcatgtagcttgtcgttttccatgcatattcatctc 4197023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 25890308 - 25890503
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  25890308 aagtgttcataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 25890407  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| ||||||||| ||||||||||||||||||||   ||||||||||||||| ||| ||||| |||||  |||||||| || ||||||||||    
T  25890408 tattttccaccatattctgaaacataaatccgacgtcgacgtcgtcgcgaataagcaaaggcatatcgcttgctgttttccacgcgtattcatctc 25890503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 70 - 249
Target Start/End: Original strand, 24050366 - 24050547
Alignment:
Q  70 acaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtata--atatattatcttctaccata 167  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||    
T  24050366 acaactcattacacatcattaaattatatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatattatcttccaccata 24050465  T
Q  168 ttccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||||||||||||||||||||||||||||   |||  |||||| ||||||||||| |||||||||||| ||||||||||    
T  24050466 ttctgaaacataaatccgacgtcgctatcgtcttcaattcgccaaggcatatagcttgccgttttccatgcgtattcatctc 24050547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 34079890 - 34079753
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  34079890 aagtgtccataattaaacaactcattacacatcattaaattaaatccttacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 34079791  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcg 191  Q
    ||||||| ||||||||| |||||||||||||| |||||    
T  34079790 tatcttccaccatattctgaaacataaatccgccgtcg 34079753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 28387979 - 28387821
Alignment:
Q  89 taaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacg 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||    
T  28387979 taaattaaatccctacttacaatcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacg 28387880  T
Q  189 tcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatct 248  Q
    |||||||||||| |||||| | ||| |||||| ||||||||||||||||  |||||||||    
T  28387879 tcgctatcgtcgtgaataa-caaaggcatataacttgtcgttttccatgtgtattcatct 28387821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 7017825 - 7017941
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  7017825 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 7017924  T
Q  154 tatcttctaccatattc 170  Q
    ||||||| |||||||||    
T  7017925 tatcttccaccatattc 7017941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 30352712 - 30352939
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgc 117  Q
    |||||||||||||||||||||| |||||||||||||||     ||  |    ||||||||||||| || | |||||||||||  ||||||||||||| ||    
T  30352712 tgaaattcatcaaaacgttacacagtgtccataattaaa----cagcacattacaactcattacatatcaataaattaaatctttacttacattcaatgc 30352807  T
Q  118 aattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacat 217  Q
    |||||||||| |||  ||||||||| ||||||||||||| ||| || |||||||||||||||||| ||||||||||||||||   || |||||||| |||    
T  30352808 aattgcatatggaaaaaacatacatatataatatattattttccacaatattccgaaacataaatacgacgtcgctatcgtctttaacaagccaaggcat 30352907  T
Q  218 atagcttgtcgttttccatgcatattcatctc 249  Q
    ||| |||| |||||| ||||||||||||||||    
T  30352908 ataacttgccgtttttcatgcatattcatctc 30352939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 119 - 249
Target Start/End: Complemental strand, 43179559 - 43179429
Alignment:
Q  119 attgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacata 218  Q
    |||||| || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  43179559 attgcagatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatcaaacgtcgctatcgtcgcgaataagccaaggcata 43179460  T
Q  219 tagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||  |||||||||||| | ||||||||    
T  43179459 tagcttaccgttttccatgcgtgttcatctc 43179429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 6267789 - 6267933
Alignment:
Q  55 agtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatatt 154  Q
    |||||||||||||||||||| ||||||| || ||||||||||||| ||||| |||||| ||||| ||||| || |||| || |||||| |||||||||||    
T  6267789 agtgtccataattaaacaacacattacatatcattaaattaaatctctactgacattctacgcagttgcagatggaacaaaaatacatatataatatatt 6267888  T
Q  155 atcttctaccatattccgaaacataaatccgacgtcgctatcgtcg 200  Q
    |||||| | ||||||||| ||||||||| ||||||||| |||||||    
T  6267889 atcttccatcatattccg-aacataaattcgacgtcgccatcgtcg 6267933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 14280759 - 14280722
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  14280759 tgaaattcatcaaaacattacaaagtgtccataattaa 14280722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 34079912 - 34079875
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  34079912 tgaaattcatcaaaacattacaaagtgtccataattaa 34079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 7017943 - 7018007
Alignment:
Q  185 gacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||  ||||||||||||||| ||| ||||||||||| | |||||||||  ||||||||||    
T  7017943 gacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccattttccatgtgtattcatctc 7018007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 24050318 - 24050355
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  24050318 tgaaattcatcaaaacgttacatagtatccataattaa 24050355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 43179681 - 43179644
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||||||| | |||||||||||||||    
T  43179681 tgaaattcatcaaaacgttaaagagtgtccataattaa 43179644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 5085 - 4890
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  5085 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 4986  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  4985 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 4890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5107 - 5070
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  5107 tgaaattcatgaaaacattacaaagtgtccataattaa 5070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 15714 - 15519
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  15714 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 15615  T
Q  154 tatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||| ||| |||||||||||||||||||||| |||||| |  ||||||||||||||| ||| ||||||||||| |||||||||| | ||||||||||    
T  15614 tattttccaccatattccgaaacataaatctgacgtccccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatacgtattcatctc 15519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15736 - 15699
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaa 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  15736 tgaaattcatcaaaacattacaaagtgtccataattaa 15699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 19890 - 19743
Alignment:
Q  20 aaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaa 119  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  19890 aaattcatcaaaacgttacaaagtggccgtaattaagtgttcataattaaacaactcattgcacatcattaaattaaatccctacttacattcaacgcaa 19791  T
Q  120 ttgcatatagaacgaacatacatgtataatatattatcttctaccata 167  Q
    |||||||| |||||| ||||||| ||||||||||||||||| ||||||    
T  19790 ttgcatatggaacgagcatacatatataatatattatcttccaccata 19743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 19582 - 19498
Alignment:
Q  165 atattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||| ||||    
T  19582 atattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctc 19498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 10978 - 10828
Alignment:
Q  99 ccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgt 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  10978 ccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgt 10879  T
Q  199 cgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    | ||||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  10878 cacgaataagccaaggcatatagcttgctgttttccatgcgtattcatctc 10828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 76 - 249
Target Start/End: Complemental strand, 1488 - 1315
Alignment:
Q  76 cattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaa 175  Q
    |||||||||| |||| ||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||||||||||||| ||| |||||||| | |||    
T  1488 cattacacatcattatattaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaa 1389  T
Q  176 cataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcatattcatctc 249  Q
    |||||||||||||||||||| |||   |||||| |||| ||||||||||| |||||||||||| ||||||||||    
T  1388 cataaatccgacgtcgctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctc 1315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 8513 - 8601
Alignment:
Q  54 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacat 142  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8513 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacat 8601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 21929 - 22144
Alignment:
Q  18 tgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatgattaaattaaatccctacttacattcaacg 116  Q
    |||||||||||||||||||| |||||||||||||||||    | | | ||||  ||||||||||||||| |||| |||||||||||||||||||||| |     
T  21929 tgaaattcatcaaaacgttaaaaagtgtccataattaaa---caacacatta--caactcattacacatcattatattaaatccctacttacattcatca 22023  T
Q  117 caattgcatatagaacgaacatacatgtataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagaca 216  Q
    ||||||||||| |||||||||||||| |||         | ||| |||||||||| |||||||||| |||||||||||| |||   ||||||||||||||    
T  22024 caattgcatatggaacgaacatacatatat---------ttttccaccatattccaaaacataaattcgacgtcgctattgtctttaataagccaagaca 22114  T
Q  217 tatagcttgtcgttttccatgcatattcat 246  Q
    |||| |||||| |||||||||| |||||||    
T  22115 tataacttgtcattttccatgcgtattcat 22144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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