View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13295_high_20 (Length: 514)

Name: NF13295_high_20
Description: NF13295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13295_high_20
NF13295_high_20
[»] chr5 (29 HSPs)
chr5 (1-480)||(40613716-40614196)
chr5 (254-484)||(40617283-40617513)
chr5 (1-109)||(11186216-11186324)
chr5 (3-88)||(13908541-13908626)
chr5 (109-167)||(27157974-27158032)
chr5 (1-107)||(27212683-27212789)
chr5 (1-106)||(26190339-26190443)
chr5 (3-59)||(32842014-32842070)
chr5 (1-80)||(41253302-41253380)
chr5 (1-103)||(25747004-25747105)
chr5 (112-173)||(28624599-28624660)
chr5 (1-104)||(39524754-39524856)
chr5 (2-80)||(18514803-18514881)
chr5 (7-105)||(26095068-26095166)
chr5 (1-106)||(24203725-24203829)
chr5 (124-181)||(26621956-26622013)
chr5 (124-181)||(28445602-28445659)
chr5 (124-180)||(4649962-4650018)
chr5 (242-321)||(12163101-12163180)
chr5 (1-40)||(23269375-23269414)
chr5 (114-173)||(27212591-27212650)
chr5 (8-50)||(1350358-1350400)
chr5 (7-80)||(9439501-9439574)
chr5 (1-50)||(26093477-26093526)
chr5 (1-50)||(29862644-29862692)
chr5 (1-106)||(33487586-33487690)
chr5 (114-159)||(34529922-34529967)
chr5 (1-50)||(38692824-38692872)
chr5 (1-29)||(38871723-38871751)
[»] chr8 (30 HSPs)
chr8 (261-400)||(12243668-12243807)
chr8 (1-80)||(36317830-36317910)
chr8 (1-104)||(4259676-4259779)
chr8 (1-80)||(1373979-1374058)
chr8 (7-106)||(17119926-17120025)
chr8 (107-179)||(7966201-7966274)
chr8 (36-109)||(33472078-33472151)
chr8 (7-106)||(40392548-40392648)
chr8 (124-167)||(1076477-1076520)
chr8 (124-170)||(6395006-6395052)
chr8 (1-50)||(27927982-27928030)
chr8 (124-173)||(34645344-34645393)
chr8 (107-167)||(10840928-10840988)
chr8 (63-106)||(7966131-7966174)
chr8 (124-167)||(17120080-17120123)
chr8 (5-56)||(21004453-21004503)
chr8 (36-107)||(24627580-24627651)
chr8 (124-167)||(28219205-28219248)
chr8 (106-164)||(6400959-6401017)
chr8 (1-109)||(8621710-8621819)
chr8 (42-80)||(13705218-13705256)
chr8 (1-30)||(1192281-1192310)
chr8 (134-167)||(4259990-4260023)
chr8 (124-173)||(7981488-7981537)
chr8 (1-106)||(16310613-16310717)
chr8 (1-50)||(31519933-31519981)
chr8 (3-40)||(40327967-40328004)
chr8 (1-106)||(40994806-40994910)
chr8 (1-106)||(44106237-44106341)
chr8 (141-173)||(36317731-36317763)
[»] chr7 (32 HSPs)
chr7 (254-380)||(41238349-41238475)
chr7 (254-359)||(23787220-23787325)
chr7 (1-104)||(31985558-31985661)
chr7 (1-93)||(39581765-39581857)
chr7 (1-107)||(6467710-6467816)
chr7 (8-109)||(7115318-7115419)
chr7 (1-109)||(36946332-36946440)
chr7 (1-86)||(6467181-6467266)
chr7 (1-77)||(5278306-5278382)
chr7 (107-173)||(43185714-43185781)
chr7 (1-109)||(48775593-48775703)
chr7 (124-173)||(5278176-5278225)
chr7 (1-106)||(28230509-28230613)
chr7 (1-50)||(36629275-36629323)
chr7 (120-173)||(37218293-37218346)
chr7 (1-106)||(37518336-37518440)
chr7 (126-173)||(6467340-6467387)
chr7 (7-109)||(16983789-16983889)
chr7 (1-35)||(1518791-1518825)
chr7 (1-50)||(24042229-24042277)
chr7 (1-106)||(47202508-47202612)
chr7 (111-164)||(48775512-48775565)
chr7 (107-179)||(48776338-48776411)
chr7 (12-80)||(25613165-25613233)
chr7 (24-108)||(30861115-30861199)
chr7 (3-106)||(3936122-3936224)
chr7 (7-106)||(8154913-8155011)
chr7 (1-106)||(24690375-24690479)
chr7 (132-173)||(30861023-30861064)
chr7 (1-106)||(42925682-42925786)
chr7 (6-50)||(37217536-37217580)
chr7 (9-49)||(47239653-47239693)
[»] chr3 (27 HSPs)
chr3 (256-351)||(30545718-30545813)
chr3 (1-106)||(51258416-51258521)
chr3 (124-189)||(54230166-54230232)
chr3 (1-89)||(30721845-30721934)
chr3 (1-80)||(45712125-45712204)
chr3 (120-167)||(29048265-29048312)
chr3 (1-80)||(29048382-29048461)
chr3 (120-174)||(512937-512991)
chr3 (3-49)||(29035784-29035830)
chr3 (7-77)||(43420177-43420247)
chr3 (107-179)||(32024887-32024960)
chr3 (1-80)||(11266307-11266386)
chr3 (120-174)||(512379-512433)
chr3 (124-166)||(5128096-5128138)
chr3 (8-50)||(35142144-35142185)
chr3 (1-50)||(3902847-3902895)
chr3 (108-188)||(26464738-26464819)
chr3 (1-106)||(34821384-34821488)
chr3 (1-50)||(39149879-39149927)
chr3 (1-50)||(43473010-43473058)
chr3 (1-50)||(46622825-46622873)
chr3 (1-50)||(47302089-47302138)
chr3 (1-49)||(2358663-2358710)
chr3 (1-49)||(3937450-3937497)
chr3 (1-49)||(33438592-33438639)
chr3 (36-104)||(35345938-35346006)
chr3 (29-109)||(51816255-51816335)
[»] chr2 (20 HSPs)
chr2 (1-107)||(34517114-34517219)
chr2 (1-80)||(5507458-5507537)
chr2 (7-80)||(27900674-27900747)
chr2 (107-173)||(30763564-30763630)
chr2 (111-173)||(34817012-34817074)
chr2 (124-173)||(33440655-33440704)
chr2 (1-72)||(33833802-33833873)
chr2 (107-173)||(17638384-17638450)
chr2 (3-88)||(8388682-8388767)
chr2 (124-173)||(19110199-19110248)
chr2 (1-106)||(33452479-33452583)
chr2 (1-49)||(32187905-32187952)
chr2 (2-106)||(38066710-38066813)
chr2 (1-104)||(19110051-19110153)
chr2 (7-104)||(12885470-12885563)
chr2 (1-59)||(41203222-41203280)
chr2 (10-103)||(30763660-30763752)
chr2 (1-106)||(36948981-36949085)
chr2 (8-109)||(37773851-37773954)
chr2 (125-173)||(45293569-45293617)
[»] chr1 (25 HSPs)
chr1 (6-106)||(34006273-34006373)
chr1 (107-173)||(25563576-25563642)
chr1 (1-59)||(26723529-26723587)
chr1 (1-106)||(24472868-24472975)
chr1 (36-107)||(800877-800948)
chr1 (1-104)||(28866671-28866774)
chr1 (6-104)||(6223782-6223880)
chr1 (7-80)||(5210326-5210399)
chr1 (1-80)||(3561376-3561456)
chr1 (1-80)||(8704559-8704638)
chr1 (107-173)||(11844253-11844320)
chr1 (111-173)||(8704685-8704747)
chr1 (132-181)||(7828290-7828339)
chr1 (1-106)||(49677497-49677601)
chr1 (10-106)||(40907983-40908079)
chr1 (107-167)||(44318820-44318880)
chr1 (1-104)||(18583585-18583687)
chr1 (124-173)||(890428-890477)
chr1 (124-181)||(9446247-9446304)
chr1 (1-106)||(23442752-23442856)
chr1 (8-41)||(25563454-25563487)
chr1 (1-50)||(32817652-32817700)
chr1 (1-50)||(33611451-33611499)
chr1 (108-148)||(34006195-34006235)
chr1 (1-29)||(42546057-42546085)
[»] chr4 (19 HSPs)
chr4 (8-106)||(3703297-3703395)
chr4 (1-106)||(8106414-8106519)
chr4 (1-104)||(34972888-34972990)
chr4 (1-109)||(7863250-7863363)
chr4 (8-59)||(37222029-37222080)
chr4 (1-106)||(7863464-7863567)
chr4 (107-173)||(5865253-5865321)
chr4 (1-106)||(48319105-48319210)
chr4 (2-50)||(17933179-17933226)
chr4 (1-80)||(346206-346284)
chr4 (124-171)||(41323298-41323345)
chr4 (108-189)||(47456511-47456594)
chr4 (2-80)||(48095909-48095988)
chr4 (1-50)||(19835598-19835646)
chr4 (1-50)||(40703742-40703790)
chr4 (136-189)||(42498079-42498132)
chr4 (1-50)||(46440315-46440363)
chr4 (55-96)||(51515596-51515637)
chr4 (124-187)||(32600793-32600857)
[»] chr6 (10 HSPs)
chr6 (1-106)||(24604402-24604507)
chr6 (1-103)||(5638879-5638980)
chr6 (2-80)||(10310443-10310521)
chr6 (1-85)||(29289666-29289751)
chr6 (119-166)||(6704276-6704323)
chr6 (1-50)||(2539521-2539569)
chr6 (1-50)||(3717324-3717372)
chr6 (9-106)||(9905132-9905229)
chr6 (7-104)||(14587607-14587703)
chr6 (1-50)||(23406866-23406914)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1-106)||(3436-3540)
[»] scaffold0091 (1 HSPs)
scaffold0091 (1-77)||(2104-2180)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-29)||(9538-9566)


Alignment Details
Target: chr5 (Bit Score: 375; Significance: 0; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 1 - 480
Target Start/End: Original strand, 40613716 - 40614196
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||| |||||||||||||||| |||||||||    
T  40613716 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatgggatgttcgaattctataatctgaaaaattcaagtaacacgcccaatt 40613815  T
Q  101 ttttgaggtgaaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaaggcattttcggagnnnnnnnt 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |    
T  40613816 ttttgaggtgaaaaactcatttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaaggcatttttggagaaaaaaat 40613915  T
Q  201 atggtgcgtgaaaaatggatagggtggaaaaattaatagtctaatgttaagtgtctttctttttggtggttaaaggcaaaatctaaaattattgttcttg 300  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40613916 atggtgcgtgagaaatggatagggtggaaaaattaatagtttaatgttaagtgtctttctttttggtggttaaaggcaaaatttaaaattattgttcttg 40614015  T
Q  301 attatcataggtgatggcttaatcctttgatgtatgtgggcatatgctgattttgtttcgttccttggttttgctcttgcggtttttgtaacacaattat 400  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40614016 attatcataggtggtggcttaatcctttaatgtatgtgggcatatgctgattttgtttcgttccttggttttgctcttgcggtttttgtaacaaaattat 40614115  T
Q  401 ataannnnnnnatcctctttctcgatacaccttgtgctgtagaga-tgagatttagcattaatatatttcattttaccctt 480  Q
    ||||       |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  40614116 ataatttttttatcctctttctcgatacaccttgtgcggtagagagtgagatttagcattaatatatttcattttaccctt 40614196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 484
Target Start/End: Original strand, 40617283 - 40617513
Alignment:
Q  254 tctttctttttggtggttaaaggcaaaatctaaaattattgttcttgattatcataggtgatggcttaatcctttgatgtatgtgggcatatgctgattt 353  Q
    |||||||||||| ||||||||| ||||||||||||| |||||| ||||  ||||||| || |||||||| | |||| ||| |||||||||||| ||||||    
T  40617283 tctttctttttgatggttaaagacaaaatctaaaat-attgtttttgaccatcatagatggtggcttaaccttttgttgtgtgtgggcatatgttgattt 40617381  T
Q  354 tgtttcgttccttggttttgctcttgcggtttttgtaacacaattatataannnnnnnatcctctttctcgatacaccttgtgctgtagaga-tgagatt 452  Q
    ||||||  ||||||||||||||||||||| |||||||||||||||||||||       | ||||||  ||  |||||||| |  || ||||| || ||||    
T  40617382 tgtttcactccttggttttgctcttgcgggttttgtaacacaattatataacttttttaacctcttcttcagtacaccttatattggagagagtgcgatt 40617481  T
Q  453 tagcattaatatatttcattttacccttcttc 484  Q
    ||||| |||| |||||||||||||||||||||    
T  40617482 tagcagtaatgtatttcattttacccttcttc 40617513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11186216 - 11186324
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||| || |||||||||  | ||||  |||| ||||||  |||| ||||||||||||||||||||  |||| ||||||||| |||    
T  11186216 agttcggattatataatccaaagtgtttttcctctgaaaatgggtgattatgggatgttcgaattctataatccgaaaaaagcaaggaacgcgccctatt 11186315  T
Q  101 ttttgaggt 109  Q
    |||||||||    
T  11186316 ttttgaggt 11186324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 13908626 - 13908541
Alignment:
Q  3 ttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagta 88  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||| |  |||||  |||| |||||||||||||| |||||||    
T  13908626 ttcggattatataatccgaactgtttttcccttgaaaaagagtgtttaggaggtgttcaaattatataatccgaaaaaatcaagta 13908541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 27158032 - 27157974
Alignment:
Q  109 tgaaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatc 167  Q
    ||||||||||  || |||||||||||||||||||| |||||||||||||||||||||||    
T  27158032 tgaaaaactcaatttttcaccctataacaaaggaacaactcagttcggattttaaaatc 27157974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27212789 - 27212683
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||| | || |||||    || | |||||||||||| ||| ||||||| ||| |||    
T  27212789 agttcgaattatataatccgaactgtttttcccttcaaaaagggtgttcagggtgtgttctggttatgtaatccgaaaaaatcatgtaacgcaccctatt 27212690  T
Q  101 ttttgag 107  Q
    |||||||    
T  27212689 ttttgag 27212683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 26190339 - 26190443
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||||||||||||||||||||| |||| || |||||||| |||||||| || || | |||||| | |||||||||||  ||| ||||||| ||| |||    
T  26190339 agttcggattatataatccgaactattttacc-ttaaaaaagggtgtttagggggtttctgaattatgtaatccgaaaacatcatgtaacgcaccctatt 26190437  T
Q  101 ttttga 106  Q
    ||||||    
T  26190438 ttttga 26190443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 32842014 - 32842070
Alignment:
Q  3 ttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtt 59  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  32842014 ttcgaattatataatccgaactgtttttcccttgaaaaagggtgtttatggggtgtt 32842070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41253380 - 41253302
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    |||||| ||||||||||||||| | ||||| ||||||||| ||||||||| || ||||||| ||||||||||||| ||||    
T  41253380 agttcgaattatataatccgaattattttttccttaaaaa-tggtgtttagggggtgtttggattctataatccggaaaa 41253302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 25747105 - 25747004
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||| ||  | |  | ||| | |||||||||||  ||| ||||||||||| |||    
T  25747105 agttcggattatataatccgaactg-ttttaccttaaaaaatggtgtttaggggatttccggattatgtaatccgaaaacatcatgtaacgcgccctatt 25747007  T
Q  101 ttt 103  Q
    |||    
T  25747006 ttt 25747004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 28624599 - 28624660
Alignment:
Q  112 aaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||| ||| ||||||| |||||    
T  28624599 aaaactcattttttcaccccataacaaaggaaaaactcagttcgaattctaaaatccgaaaa 28624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 39524856 - 39524754
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||| || || |  ||||| | |||||||||||  ||| ||||| ||||| |||    
T  39524856 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgtttagggggtttccgaattatgtaatccgaaaacatcatgtaacacgccctatt 39524758  T
Q  101 tttt 104  Q
    ||||    
T  39524757 tttt 39524754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 18514881 - 18514803
Alignment:
Q  2 gttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    |||| |||||||||||| |||||||||||||| | || || |||||||| || ||| |  |||||||||||||||||||    
T  18514881 gttcagattatataatctgaactgtttttcccctgaataagggtgtttagggggtgatcaaattctataatccgaaaaa 18514803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 26095166 - 26095068
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttg 105  Q
    |||||||||||||||||| ||||||| || |||||  |||||||||| ||||| | ||| | ||||||||||||   | ||||||||| | ||||||||    
T  26095166 gattatataatccgaactatttttcctttgaaaaagagtgtttatggggtgttcggattatgtaatccgaaaaaaatatgtaacgcgctctattttttg 26095068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24203725 - 24203829
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||||||||||||| |||||||||||| ||| ||||||| |||||||| || || |  | ||| | ||||||| |||  ||| ||||||||||| |||    
T  24203725 agttcggattatataacccgaactgttttaccc-taaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctatt 24203823  T
Q  101 ttttga 106  Q
    ||||||    
T  24203824 ttttga 24203829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 26622013 - 26621956
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaagg 181  Q
    ||||||| ||||||||  ||||| |||||||||||| ||||||||||||| |||||||    
T  26622013 ttcaccccataacaaacaaaaaagtcagttcggattctaaaatctgaaaatctcaagg 26621956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 28445602 - 28445659
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaagg 181  Q
    |||||| |||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  28445602 ttcaccttataacaaaggaaaacattagttcggattttaaaatccgaaaatctcaagg 28445659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 4650018 - 4649962
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaag 180  Q
    ||||||||||||||||||||||   || |||| ||||||||||||||||| ||||||    
T  4650018 ttcaccctataacaaaggaaaacaccaattcgaattttaaaatctgaaaatctcaag 4649962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 12163101 - 12163180
Alignment:
Q  242 taatgttaagtgtctttctttttggtggttaaaggcaaaatctaaaattattgttcttgattatcataggtgatggctta 321  Q
    ||||||||||  |||||||||||||||||||||| |||| |  |||||||||| | |||||||   |||||| |||||||    
T  12163101 taatgttaagcttctttctttttggtggttaaagacaaatttcaaaattattgcttttgattactgtaggtggtggctta 12163180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23269414 - 23269375
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaa 40  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  23269414 agttcggattatataatctgaactgtttttcccttgaaaa 23269375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 27212650 - 27212591
Alignment:
Q  114 aactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||| ||| ||||||||||||||||||||||  |||||||||||| | ||||| |||||    
T  27212650 aactcattttttcaccctataacaaaggaaaacatcagttcggattatgaaatccgaaaa 27212591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 1350358 - 1350400
Alignment:
Q  8 attatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    |||||||||||||||||||||||||||| ||||| | ||||||    
T  1350358 attatataatccgaactgtttttcccttgaaaaaagatgttta 1350400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 9439501 - 9439574
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||| |||||  ||| |||||||||||| || || | |||||| || ||||| ||||||||||||||||||||    
T  9439501 gattacataatttgaattgtttttcccttgaataaggatgtttaaggggtgttcgaattctataatccgaaaaa 9439574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26093526 - 26093477
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    |||| ||||||||||||| ||||| ||||||| || ||||||||||||||    
T  26093526 agttaggattatataatctgaactatttttccattgaaaaatggtgttta 26093477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29862692 - 29862644
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||| ||||||| |||| |||| ||||||||||||||    
T  29862692 agttcggattatataattcgaactg-ttttaccttgaaaaatggtgttta 29862644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 33487690 - 33487586
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||| |||| |||| ||||  |||||||| ||||| |  | ||| | ||| |||||||  |||  |||||||||| |||    
T  33487690 agttcggattatataatccgaactg-ttttaccttgaaaaggggtgtttagggagtttccggattatgtaacccgaaaacatcatataacgcgccctatt 33487592  T
Q  101 ttttga 106  Q
    ||||||    
T  33487591 ttttga 33487586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 34529967 - 34529922
Alignment:
Q  114 aactcctttcttcaccctataacaaaggaaaaactcagttcggatt 159  Q
    ||||| ||| |||| |||||||||||||||||||| ||||||||||    
T  34529967 aactcattttttcatcctataacaaaggaaaaactaagttcggatt 34529922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38692824 - 38692872
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||| ||||||||    
T  38692824 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgttta 38692872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 38871751 - 38871723
Alignment:
Q  1 agttcggattatataatccgaactgtttt 29  Q
    |||||||||||||||||||||||||||||    
T  38871751 agttcggattatataatccgaactgtttt 38871723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 261 - 400
Target Start/End: Original strand, 12243668 - 12243807
Alignment:
Q  261 ttttggtggttaaaggcaaaatctaaaattattgttcttgattatcataggtgatggcttaatcctttgatgtatgtgggcatatgctgattttgtttcg 360  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| | ||||||||  | ||| ||| |||||||||| ||||| ||||||||     
T  12243668 ttttggtggttaaaggcaaaatctaatattattgtttttgattatcataggcggtggcttaactccttgttgtgtgtgggcataggctgactttgtttct 12243767  T
Q  361 ttccttggttttgctcttgcggtttttgtaacacaattat 400  Q
    ||||||||||||| |||||||||||||| |||||| ||||    
T  12243768 ttccttggttttgttcttgcggtttttgaaacacatttat 12243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 36317910 - 36317830
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaat-ggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||| ||  |||| ||||||||||||||| ||||    
T  36317910 agttcagattatataatccgaactgtttttcccttaaaaaatgggtgtttaggggttgttcgaattctataatccggaaaa 36317830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4259676 - 4259779
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| |||||||||||||||| | |||||||||| |||||||||||||| || ||| |  |||| |||||||||||||| ||||| ||| ||||| |||    
T  4259676 agttcagattatataatccgaattatttttcccttgaaaaatggtgtttagggggtgctcaaattatataatccgaaaaaatcaaggaacacgccctatt 4259775  T
Q  101 tttt 104  Q
    ||||    
T  4259776 tttt 4259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1374058 - 1373979
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||||||||| |||||||||| |||||||||| |||| || |||||||| |||||||| ||||| |||||| |||||||    
T  1374058 agttcggattacataatccgaattgtttttcccataaataagggtgtttagggagtgttcgaattttataattcgaaaaa 1373979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 17119926 - 17120025
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttga 106  Q
    ||||||||||||||||||| ||||||  | |||||||||||||| || |||||   ||| ||||| |||||||| |||| || |||||||||||||||||    
T  17119926 gattatataatccgaactggttttccaatgaaaaatggtgtttaaggggtgttcagattatataaaccgaaaaaatcaaatagcgcgcccaattttttga 17120025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 7966201 - 7966274
Alignment:
Q  107 ggtgaaaaactcctttctt-caccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaa 179  Q
    |||||||||||| ||| || || || |||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  7966201 ggtgaaaaactcatttttttcatcccataacaaaggaaaaactcagttcgaattttaaaatccgaaaatctcaa 7966274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 33472151 - 33472078
Alignment:
Q  36 aaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttgaggt 109  Q
    ||||||||||||||| || ||| ||  |||||||||||||||||| |||| || ||||||| ||||||||||||    
T  33472151 aaaaaatggtgtttagggggtggttagattctataatccgaaaaaatcaaatagcgcgccctattttttgaggt 33472078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 40392648 - 40392548
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccg-aaaaattcaagtaacgcgcccaattttttg 105  Q
    ||||||||||||||||||||||||||||| ||||  |||||| |  ||||||| | ||| ||| ||||| ||||| |||||| || ||||| ||||||||    
T  40392648 gattatataatccgaactgtttttcccttgaaaacgggtgttcagagagtgttcggattatatcatccgaaaaaaatcaagtgacacgccctattttttg 40392549  T
Q  106 a 106  Q
    |    
T  40392548 a 40392548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 1076520 - 1076477
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatc 167  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  1076520 ttcaccctataacaaaggaaaatctcggttcggattttaaaatc 1076477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 6395052 - 6395006
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctga 170  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||    
T  6395052 ttcaccctataataaagaaaaaactcagttcgaattttaaaatctga 6395006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27927982 - 27928030
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  27927982 agttcggattatataatccgaactg-ttttaccttgaaaaatggtgttta 27928030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 34645393 - 34645344
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||| |||| ||||||||||||||||||||  |||||||||||||||||    
T  34645393 ttcactctattacaaaggaaaaactcagttcatattttaaaatctgaaaa 34645344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 10840928 - 10840988
Alignment:
Q  107 ggtgaaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatc 167  Q
    |||| ||| ||| ||| ||||||| |||||||||||||||| ||||||||||| |||||||    
T  10840928 ggtggaaacctcattttttcaccccataacaaaggaaaaacacagttcggattataaaatc 10840988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 7966131 - 7966174
Alignment:
Q  63 attctataatccgaaaaattcaagtaacgcgcccaattttttga 106  Q
    |||||||||||| ||||||||||||||| ||||| |||||||||    
T  7966131 attctataatccaaaaaattcaagtaacacgccctattttttga 7966174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 17120080 - 17120123
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatc 167  Q
    ||||||||||||||||||||||||| | |||||||| |||||||    
T  17120080 ttcaccctataacaaaggaaaaactgaattcggattataaaatc 17120123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 21004503 - 21004453
Alignment:
Q  5 cggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagt 56  Q
    |||||||||||||||||||| |||| || ||||||||||||||||| |||||    
T  21004503 cggattatataatccgaactattttacc-ttaaaaaatggtgtttagggagt 21004453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 24627651 - 24627580
Alignment:
Q  36 aaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttgag 107  Q
    ||||||||||||||| || || || | |||||||||||||||||| |||| || |||| || ||||||||||    
T  24627651 aaaaaatggtgtttagggggtattcggattctataatccgaaaaaatcaaatagcgcgtcctattttttgag 24627580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 28219205 - 28219248
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatc 167  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||    
T  28219205 ttcaccccataacaaaggaaaaactcaattcggattataaaatc 28219248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 6401017 - 6400959
Alignment:
Q  106 aggtgaaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaa 164  Q
    ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||||| ||||    
T  6401017 aggtgaaaaactctttttttcaccccataacaaagaagaaactcaattcggattataaa 6400959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8621710 - 8621819
Alignment:
Q  1 agttcggattatataatccgaactgttttt-cccttaaaaaatggtgtttatggag-tgtttgaattctataatccgaaaaattcaagtaacgcgcccaa 98  Q
    ||||| ||||||||||||  |||||||||| ||||| ||| | |||||||| || | |||| | |||||||||||||||||| |||| ||||||||   |    
T  8621710 agttcagattatataatcttaactgtttttccccttgaaatagggtgtttagggtgatgttcggattctataatccgaaaaa-tcaaataacgcgctata 8621808  T
Q  99 ttttttgaggt 109  Q
    |||||||||||    
T  8621809 ttttttgaggt 8621819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 13705256 - 13705218
Alignment:
Q  42 tggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  13705256 tggtgtatatggagtgtttgaattttataatccgaaaaa 13705218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 1192281 - 1192310
Alignment:
Q  1 agttcggattatataatccgaactgttttt 30  Q
    ||||||||||||||||||||||||||||||    
T  1192281 agttcggattatataatccgaactgttttt 1192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 4259990 - 4260023
Alignment:
Q  134 aacaaaggaaaaactcagttcggattttaaaatc 167  Q
    |||||||||||| |||||||||||||||||||||    
T  4259990 aacaaaggaaaagctcagttcggattttaaaatc 4260023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 7981537 - 7981488
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||||||||| |||||||||||||||||||  ||| ||||||| |||||    
T  7981537 ttcaccctatagcaaaggaaaaactcagttcaaattctaaaatccgaaaa 7981488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16310717 - 16310613
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||||||||||||||  |||||| |||| |||| ||||| |||||||| ||||| | || ||| | ||||||| |||| |||  |||||| ||| |||    
T  16310717 agttcggattatataatttgaactg-ttttaccttgaaaaagggtgtttagggagtttctggattgtgtaatccggaaaaatcatctaacgcaccctatt 16310619  T
Q  101 ttttga 106  Q
    ||||||    
T  16310618 ttttga 16310613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31519933 - 31519981
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||  |||| |||||||||| ||||||||    
T  31519933 agttcggattatataatccgaact-attttaccttaaaaaagggtgttta 31519981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 40327967 - 40328004
Alignment:
Q  3 ttcggattatataatccgaactgtttttcccttaaaaa 40  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  40327967 ttcggattatataatccgaactagttttcccttaaaaa 40328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40994910 - 40994806
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||||||| || || | ||| |||||||| || || ||   ||| | ||||||| |||  ||| ||||||||||| |||    
T  40994910 agttcggattatataatccgaactgttttacc-ttgataaagggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatt 40994812  T
Q  101 ttttga 106  Q
    ||||||    
T  40994811 ttttga 40994806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 44106341 - 44106237
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| ||||||||||||||||||| |||| |||| ||||| |||||||| || || |  | ||| | ||||||| |||  ||| ||||||||||| |||    
T  44106341 agttcagattatataatccgaactg-ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctatt 44106243  T
Q  101 ttttga 106  Q
    ||||||    
T  44106242 ttttga 44106237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 36317763 - 36317731
Alignment:
Q  141 gaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||||||||||||||||||||||||| |||||    
T  36317763 gaaaaactcagttcggattttaaaatccgaaaa 36317731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 4e-27; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 254 - 380
Target Start/End: Complemental strand, 41238475 - 41238349
Alignment:
Q  254 tctttctttttggtggttaaaggcaaaatctaaaattattgttcttgattatcataggtgatggcttaatcctttgatgtatgtgggcatatgctgattt 353  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||| ||||  |  |||||||||| |  |||||||  |||||||    
T  41238475 tctttctttttggtagttaaaggcaaaatacaaaattattgtttttgattatcataggtggtggccaagccctttgatgtgtacgggcatagactgattt 41238376  T
Q  354 tgtttcgttccttggttttgctcttgc 380  Q
    |||||| ||||||||||||| ||||||    
T  41238375 tgtttctttccttggttttgttcttgc 41238349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 23787325 - 23787220
Alignment:
Q  254 tctttctttttggtggttaaaggcaaaatctaaaattattgttcttgattatcataggtgatggcttaatcctttgatgtatgtgggcatatgctgattt 353  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||| |||  ||||| ||| || ||||||||| |||| |    
T  23787325 tctttctttttgatggttaaaggcaaaatctaaaattactgtttttgattattataggtgatggcctaactctttgttgtgtgcgggcatatgttgatat 23787226  T
Q  354 tgtttc 359  Q
    ||||||    
T  23787225 tgtttc 23787220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31985558 - 31985661
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||||| || ||||| ||||| | |||||||||||| ||| ||||||||||| |||    
T  31985558 agttcgaattatataatccgaactgtttcccccttgaaaaatggtgtttaaggggtgttcgaattatgtaatccgaaaaaatcatgtaacgcgccctatt 31985657  T
Q  101 tttt 104  Q
    ||||    
T  31985658 tttt 31985661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 39581857 - 39581765
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcg 93  Q
    |||||||||||||||||| ||| | ||| |||||| ||||| ||||||||||| |||||||||||||||||||||||||   |||||||||||    
T  39581857 agttcggattatataatctgaattatttctcccttgaaaaagggtgtttatggggtgtttgaattctataatccgaaaatagcaagtaacgcg 39581765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6467816 - 6467710
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||| | ||| | ||||||||| || ||| ||||| | ||| |||    
T  6467816 agttcggattatataatccgaactgtttttcccttgaaaaagggtgtttagggggtgttcggattatgtaatccgaacaaatcatgtaacacaccctatt 6467717  T
Q  101 ttttgag 107  Q
    |||||||    
T  6467716 ttttgag 6467710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 7115318 - 7115419
Alignment:
Q  8 attatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttgag 107  Q
    ||||||||||||||| |||||||||| | |||||||||||||| || || ||   ||| |||||| ||||||| ||||||||||| ||| ||||||||||    
T  7115318 attatataatccgaattgtttttccccttaaaaatggtgtttagggggttttcagattatataattcgaaaaaatcaagtaacgcaccctattttttgag 7115417  T
Q  108 gt 109  Q
    ||    
T  7115418 gt 7115419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36946332 - 36946440
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||| |||||||||||||| |||||||||||| ||||| ||||||||    ||||||| ||| |||||||| ||||| | ||||||||| | | |||    
T  36946332 agttcgggttatataatccgaattgtttttcccttgaaaaaaggtgtttaaatggtgtttggattttataatccaaaaaaattaagtaacgcactctatt 36946431  T
Q  101 ttttgaggt 109  Q
    |||||||||    
T  36946432 ttttgaggt 36946440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6467181 - 6467266
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaag 86  Q
    |||||||||||||||||| ||| |||||||||||| ||||||| ||||||  | ||||| | ||||||||||||| |||| |||||    
T  6467181 agttcggattatataatctgaattgtttttcccttgaaaaatgatgtttagagggtgttcggattctataatccggaaaaatcaag 6467266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5278382 - 5278306
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaa 77  Q
    ||||| |||||||||||||||||| |||||||||| ||| | ||| |||| || ||||||| |||||||||||||||    
T  5278382 agttcagattatataatccgaactatttttcccttgaaagagggtatttaaggggtgtttggattctataatccgaa 5278306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 43185781 - 43185714
Alignment:
Q  107 ggtgaaaaactcctttctt-caccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||||||||| ||| || |||||||||||||||||||||||||| | |||||||||||||| ||||    
T  43185781 ggtgaaaaactcttttttttcaccctataacaaaggaaaaactcagattggattttaaaatctaaaaa 43185714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 48775703 - 48775593
Alignment:
Q  1 agttcggattatataatccgaactgttttt--cccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaa 98  Q
    ||||||||||||||||||| |||| |||||  ||||| ||| | | |||||| || ||||| |||||| ||||||||||||  |||||||| || ||| |    
T  48775703 agttcggattatataatcctaactatttttttcccttgaaataggatgtttaaggggtgttcgaattccataatccgaaaacatcaagtaatgcacccta 48775604  T
Q  99 ttttttgaggt 109  Q
    |||||||||||    
T  48775603 ttttttgaggt 48775593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 5278225 - 5278176
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  5278225 ttcaccccttaacaaaggaaaaactccgttcggattttaaaatctgaaaa 5278176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 28230509 - 28230613
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||| || || |  | ||| | ||||||| |||  ||||||||||||||| |||    
T  28230509 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcaagtaacgcgccctatt 28230607  T
Q  101 ttttga 106  Q
    ||||||    
T  28230608 ttttga 28230613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36629323 - 36629275
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  36629323 agttcggattatataatccgaactg-ttttaccttaaaaaatggtgttta 36629275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 37218293 - 37218346
Alignment:
Q  120 tttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||| |||||    
T  37218293 tttctccaccctataacaaaagaaaaactcagttcgggttttaaaatccgaaaa 37218346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 37518336 - 37518440
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||| || || |  | ||| | ||||||| ||| |||| ||||| ||||| |||    
T  37518336 agttcggattatataatccgaactg-ttttaccttgaaaaatggtgtttagggggtttccggattatgtaatccggaaacttcatgtaacacgccctatt 37518434  T
Q  101 ttttga 106  Q
    ||||||    
T  37518435 ttttga 37518440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 6467340 - 6467387
Alignment:
Q  126 caccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  6467340 caccctataacaaaggaaaaattcagttcgaattttaaaatttgaaaa 6467387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 16983789 - 16983889
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttga 106  Q
    |||||||||||||||||||||||| || | ||||||||||||||||  ||||| | ||||||||||  ||||||  |||| ||| | | | |||||||||    
T  16983789 gattatataatccgaactgttttttccctgaaaaatggtgtttatg--gtgttcggattctataatttgaaaaaaacaaggaacacacactattttttga 16983886  T
Q  107 ggt 109  Q
    |||    
T  16983887 ggt 16983889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 1518825 - 1518791
Alignment:
Q  1 agttcggattatataatccgaactgtttttccctt 35  Q
    |||||||||||||||||||||||||||||||||||    
T  1518825 agttcggattatataatccgaactgtttttccctt 1518791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24042229 - 24042277
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  24042229 agttcggattatataatccgaactg-ttttaccttgaaaaatggtgttta 24042277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 47202612 - 47202508
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||  |||| |||||||||| |||||||| || || |  | ||| | ||||||| |||  ||| ||||||||||| |||    
T  47202612 agttcggattatataatccgaact-attttaccttaaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctatt 47202514  T
Q  101 ttttga 106  Q
    ||||||    
T  47202513 ttttga 47202508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 48775565 - 48775512
Alignment:
Q  111 aaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaa 164  Q
    |||||||  ||| ||||| ||||||||||||||||||||| |||||||||||||    
T  48775565 aaaaactttttttttcactctataacaaaggaaaaactcaattcggattttaaa 48775512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 48776338 - 48776411
Alignment:
Q  107 ggtgaaaaactcctttctt-caccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaa 179  Q
    |||||||||||| ||| || |||||||||  |||||||||||||| |||| |||||||||||| |||| |||||    
T  48776338 ggtgaaaaactcatttttttcaccctatagtaaaggaaaaactcaattcgaattttaaaatctaaaaatctcaa 48776411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 25613165 - 25613233
Alignment:
Q  12 tataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||||||||||||| |||||| | || ||||||||||| || ||| | | ||||||||||||||||||    
T  25613165 tataatccgaactgtctttcccctgaataatggtgtttagggggtgctcggattctataatccgaaaaa 25613233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 30861199 - 30861115
Alignment:
Q  24 tgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttgagg 108  Q
    |||||||||| | ||||| ||||||||||| ||||| | ||||||||||||||||||  |||| ||| | | | |||||||||||    
T  30861199 tgtttttcccctgaaaaaaggtgtttatggggtgttcggattctataatccgaaaaaagcaaggaacacacactattttttgagg 30861115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 3936224 - 3936122
Alignment:
Q  3 ttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatttt 102  Q
    ||||||||||||||| || |||||||| || || ||||| |||||||| || || |||| ||| | ||||||| |||  ||| ||||||||||| |||||    
T  3936224 ttcggattatataattcggactgttttacc-ttgaaaaagggtgtttagggggtttttggattatgtaatccggaaacatcatgtaacgcgccctatttt 3936126  T
Q  103 ttga 106  Q
    ||||    
T  3936125 ttga 3936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 8155011 - 8154913
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttga 106  Q
    |||||||||||||||||| |||| || |||||||| |||||||| || || || | ||| | ||||||| |||  ||| ||||||||||| |||||||||    
T  8155011 gattatataatccgaactattttacc-ttaaaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatgtaacgcgccctattttttga 8154913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24690375 - 24690479
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| ||||||||||||| | ||||||||||||| ||||| |||||||  || ||||| | ||| ||||||| |||||| |||| ||  | |||| |||    
T  24690375 agttcagattatataatcc-atctgtttttcccttgaaaaagggtgtttgaggggtgttcggattgtataatctgaaaaaatcaaatagtgagccctatt 24690473  T
Q  101 ttttga 106  Q
    ||||||    
T  24690474 ttttga 24690479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 30861064 - 30861023
Alignment:
Q  132 ataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||||||||||||||||| |||||||| ||||||| |||||    
T  30861064 ataacaaaggaaaaactcaattcggattctaaaatccgaaaa 30861023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 42925682 - 42925786
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||| |||||||||||||||||| |||| |||| ||||| |||||||| || || |  | ||| | |||||||||||  ||| |||| |||||| |||    
T  42925682 agttcgtattatataatccgaactg-ttttaccttgaaaaaaggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaatgcgccctatt 42925780  T
Q  101 ttttga 106  Q
    ||||||    
T  42925781 ttttga 42925786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 37217536 - 37217580
Alignment:
Q  6 ggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||| |||||||||||||||||| |||||  |||||||    
T  37217536 ggattatataaaccgaactgtttttcccttgaaaaagtgtgttta 37217580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 47239653 - 47239693
Alignment:
Q  9 ttatataatccgaactgtttttcccttaaaaaatggtgttt 49  Q
    ||||||||||||||||||||||||  | |||||||||||||    
T  47239653 ttatataatccgaactgtttttcctctgaaaaatggtgttt 47239693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 30545813 - 30545718
Alignment:
Q  256 tttctttttggtggttaaaggcaaaatctaaaattattgttcttgattatcataggtgatggcttaatcctttgatgtatgtgggcatatgctgat 351  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||  |||||||||||| | ||||| ||||||    
T  30545813 tttctttttggtggttaaagctaaaatctaaaattattgtttttgattatcataggtggtggcttaactctttgatgtatgcgagcataggctgat 30545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 51258521 - 51258416
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||||| || ||||| | ||| | |||||||||||| | | ||||||||||| |||    
T  51258521 agttcggattatataattcaaattgtttttcccttgaaaaatggtgtttagggggtgttcggattatgtaatccgaaaaaattatgtaacgcgccctatt 51258422  T
Q  101 ttttga 106  Q
    ||||||    
T  51258421 ttttga 51258416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 54230166 - 54230232
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaa-ggcattttcg 189  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  54230166 ttcaccccataacaaaggaaaaactcagttcggattttaaaatccgaaaatctcaagggcattttcg 54230232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30721845 - 30721934
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta-tggagtgtttgaattctataatccgaaaaattcaagtaa 89  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||||  |||||||| | ||| | |||||||||||| ||| ||||    
T  30721845 agttcggattatataatctgaactatttttcccttgaaaaatggtgtttaggggagtgttcggattatgtaatccgaaaaaatcatgtaa 30721934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 45712125 - 45712204
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggag-tgtttgaattctataatccgaaaaa 80  Q
    ||||| ||||||||||||||||||||||||||||| || || ||| |||| |||| |||||| ||||||||||||||||||    
T  45712125 agttcagattatataatccgaactgtttttcccttgaataagggttttta-ggagatgtttggattctataatccgaaaaa 45712204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 29048312 - 29048265
Alignment:
Q  120 tttcttcaccctataacaaaggaaaaactcagttcggattttaaaatc 167  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  29048312 tttcttcaccccataacaaaggaaaaacttagttcggattttaaaatc 29048265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29048461 - 29048382
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||| |||||||||||| ||| |||||||||||| ||||| | |||||| || ||||| | ||||||||||||||||||    
T  29048461 agttccgattatataatctgaattgtttttcccttgaaaaaggatgtttagggggtgttcggattctataatccgaaaaa 29048382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 512937 - 512991
Alignment:
Q  120 tttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaac 174  Q
    |||||||| || ||||||||||||||||||| |||||||| |||||||| |||||    
T  512937 tttcttcatcccataacaaaggaaaaactcaattcggattataaaatctaaaaac 512991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 29035830 - 29035784
Alignment:
Q  3 ttcggattatataatccgaactgtttttcccttaaaaaatggtgttt 49  Q
    |||| ||||||||||||||||||||||||||||||| || |||||||    
T  29035830 ttcgaattatataatccgaactgtttttcccttaaataagggtgttt 29035784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 43420177 - 43420247
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaa 77  Q
    ||||||||||||| || ||| |||| ||| || || ||||||||||| ||||||| |||||||||||||||    
T  43420177 gattatataatccaaattgtatttctcttgaataagggtgtttatggggtgtttggattctataatccgaa 43420247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 32024960 - 32024887
Alignment:
Q  107 ggtgaaaaactcctttc-ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaa 179  Q
    |||||||||||| |||  |||||||||||| |||||||||  |||||||| ||||||||||| ||||| |||||    
T  32024960 ggtgaaaaactctttttgttcaccctataataaaggaaaacatcagttcgaattttaaaatccgaaaatctcaa 32024887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11266386 - 11266307
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||||||||||||||| |  ||||||||| |||| ||||| |||||||| ||   |||  |||||||||||||||||||    
T  11266386 agttcggattatataatgcagactgttttttccttgaaaaagggtgtttaggggcagttcaaattctataatccgaaaaa 11266307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 512379 - 512433
Alignment:
Q  120 tttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaac 174  Q
    |||||||| || ||||||||||||||||||| ||| |||| |||||||| |||||    
T  512379 tttcttcatcccataacaaaggaaaaactcaattcagattataaaatctaaaaac 512433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 5128096 - 5128138
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaat 166  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||    
T  5128096 ttcaccctataacaaagtaaaaactccgtttggattttaaaat 5128138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 35142185 - 35142144
Alignment:
Q  8 attatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  35142185 attatataatccgaactg-ttttaccttaaaaaatggtgttta 35142144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3902847 - 3902895
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||| ||||||||    
T  3902847 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgttta 3902895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 26464819 - 26464738
Alignment:
Q  108 gtgaaaaactcctttctt-caccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaaggcattttc 188  Q
    ||||||||||| ||| || || || ||||||||||| |||||||||||||||| ||||||   ||||  |||||||||||||    
T  26464819 gtgaaaaactcatttttttcatcccataacaaaggataaactcagttcggattctaaaattctaaaatatcaaggcattttc 26464738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 34821384 - 34821488
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| ||||||||||||||||||  |||| |||| |||||||||||||| || || |  | ||| | |||||||||||  ||| ||||||||| | |||    
T  34821384 agttcagattatataatccgaact-attttaccttgaaaaatggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaacgcgctctatt 34821482  T
Q  101 ttttga 106  Q
    ||||||    
T  34821483 ttttga 34821488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39149927 - 39149879
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    |||||||||||||||| |||||||| |||| |||| ||||||||||||||    
T  39149927 agttcggattatataacccgaactg-ttttaccttgaaaaatggtgttta 39149879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43473010 - 43473058
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||| ||||||  |||| |||||||||||||||||||    
T  43473010 agttcggattatataattcgaact-attttaccttaaaaaatggtgttta 43473058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46622825 - 46622873
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| | || ||||||||||||||    
T  46622825 agttcggattatataatccgaactg-ttttactttgaaaaatggtgttta 46622873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47302138 - 47302089
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    |||||||||||||||||||||||| |||| || | |||||| ||||||||    
T  47302138 agttcggattatataatccgaactattttaccttaaaaaaagggtgttta 47302089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2358663 - 2358710
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttt 49  Q
    ||||||||||||||||||||||||  |||| |||||||||| |||||||    
T  2358663 agttcggattatataatccgaact-attttaccttaaaaaagggtgttt 2358710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3937497 - 3937450
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttt 49  Q
    ||||||||||||||||||||||||  |||| |||||||||| |||||||    
T  3937497 agttcggattatataatccgaact-attttaccttaaaaaagggtgttt 3937450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33438639 - 33438592
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttt 49  Q
    ||||| ||||||||||||||||||| |||| |||| |||||||||||||    
T  33438639 agttcagattatataatccgaactg-ttttaccttgaaaaatggtgttt 33438592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 35345938 - 35346006
Alignment:
Q  36 aaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatttttt 104  Q
    ||||||||||||||| || |||||  |||| ||||||| ||||||||||| || ||| ||| |||||||    
T  35345938 aaaaaatggtgtttacggggtgttcaaattatataatctgaaaaattcaaatagcgcaccctatttttt 35346006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 51816335 - 51816255
Alignment:
Q  29 ttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttgaggt 109  Q
    ||||||| ||||| ||||||||  | ||||| |  ||||||||||||||||| |||||||| ||  || ||||||||||||    
T  51816335 ttcccttgaaaaagggtgtttagagggtgttcgggttctataatccgaaaaaatcaagtaatgcatcctattttttgaggt 51816255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 9e-25; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34517219 - 34517114
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| || || |||| ||| | |||||||||||| ||| ||||||||||| |||    
T  34517219 agttcggattatataatccaaactgtttttcccttgaaaaatggtgtttaaggggtatttggattatgtaatccgaaaaa-tcatgtaacgcgccctatt 34517121  T
Q  101 ttttgag 107  Q
    |||||||    
T  34517120 ttttgag 34517114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5507537 - 5507458
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||| || ||||| | ||| ||||||||||||||    
T  5507537 agttcggattatataatccgaactattttttccttaagaaaaggtgtttagggggtgttcggattatataatccgaaaaa 5507458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 27900674 - 27900747
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||||||||||||||||||||||||| | || || |||||||| || ||||| ||||| ||||||||||||||    
T  27900674 gattatataatccgaactgtttttcccctgaagaagggtgtttagggggtgttcgaattttataatccgaaaaa 27900747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 30763630 - 30763564
Alignment:
Q  107 ggtgaaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||||| ||| ||| ||||| ||| ||||||  ||||||||||||||||||||||||||||||||    
T  30763630 ggtgaaaacctcattttttcactctaaaacaaacaaaaaactcagttcggattttaaaatctgaaaa 30763564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 34817074 - 34817012
Alignment:
Q  111 aaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||||| ||| |||||||||||| || |||||||||||||||  |||||||||||||||||    
T  34817074 aaaaactcattttttcaccctataataatggaaaaactcagttcaaattttaaaatctgaaaa 34817012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 33440655 - 33440704
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||| ||||||||||||||||||||||||||||||| |||||| ||||||    
T  33440655 ttcatcctataacaaaggaaaaactcagttcggattctaaaatttgaaaa 33440704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33833873 - 33833802
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataat 72  Q
    |||||||||||||||||| |||||||||||||  |||| || |||||||| || ||||| | ||||||||||    
T  33833873 agttcggattatataatctgaactgtttttccactaaataacggtgtttagggggtgttcggattctataat 33833802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 17638384 - 17638450
Alignment:
Q  107 ggtgaaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||| ||||| ||| ||||||||  ||||||| |||||||||| ||||||||||||||| |||||    
T  17638384 ggtgaagaactcattttttcaccctggaacaaagaaaaaactcagctcggattttaaaatccgaaaa 17638450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 8388767 - 8388682
Alignment:
Q  3 ttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagta 88  Q
    |||||| ||||||||| ||||||||||| ||||||||||  ||||||| || ||||| | ||| |||||||| ||| | |||||||    
T  8388767 ttcggactatataatctgaactgttttttccttaaaaaagagtgtttaaggggtgttaggattatataatccaaaacaatcaagta 8388682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 19110199 - 19110248
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||||| || ||||||||||||||||||||||||| ||||||| |||||    
T  19110199 ttcaccccatgacaaaggaaaaactcagttcggattctaaaatccgaaaa 19110248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33452479 - 33452583
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||| ||||| |  | ||| | | ||||| |||  ||| ||||||||||| |||    
T  33452479 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgtttagggagtttccggattatgtgatccggaaacatcatgtaacgcgccctatt 33452577  T
Q  101 ttttga 106  Q
    ||||||    
T  33452578 ttttga 33452583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32187905 - 32187952
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttt 49  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  32187905 agttcggattatataatccgaactg-ttttaccttgaaaaatggtgttt 32187952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 38066710 - 38066813
Alignment:
Q  2 gttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattt 101  Q
    |||||| |||||||||  |||||||||||||||| ||||  ||||||||||| |||||||  || | |||||||||||| |||  |||| | ||| ||||    
T  38066710 gttcggtttatataatatgaactgtttttcccttgaaaaggggtgtttatgg-gtgtttgggttatgtaatccgaaaaaatcatataacacaccctattt 38066808  T
Q  102 tttga 106  Q
    |||||    
T  38066809 tttga 38066813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 19110051 - 19110153
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||| ||||||||||||| ||||  |||||||||| ||||| |||||||| || ||| |   ||||||||||| |||||| ||||| ||| ||||| |||    
T  19110051 agtttggattatataatc-gaacaatttttcccttgaaaaagggtgtttagggggtgatcagattctataatcagaaaaaatcaaggaacacgccctatt 19110149  T
Q  101 tttt 104  Q
    ||||    
T  19110150 tttt 19110153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 12885470 - 12885563
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatttttt 104  Q
    |||||||||||| |||||||||||||| |||| || |||| ||| || ||||| | ||||||||||||||||| |  ||| ||||||||| |||||||    
T  12885470 gattatataatctgaactgtttttccc-taaataagggtggttagggggtgttcg-attctataatccgaaaagt--aaggaacgcgccctatttttt 12885563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41203222 - 41203280
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtt 59  Q
    ||||||| |||||||||| |||||||||||| ||| ||||| |||||||| || |||||    
T  41203222 agttcggtttatataatctgaactgtttttctctttaaaaagggtgtttacggggtgtt 41203280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 30763752 - 30763660
Alignment:
Q  10 tatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttt 103  Q
    ||||||||| ||||||||||||  || |||||||||||||| || ||||| | ||| |||||||| ||||| ||||  |||||| || ||||||    
T  30763752 tatataatcagaactgtttttcttttgaaaaatggtgtttaagg-gtgttcggattatataatccaaaaaaatcaacgaacgcgtcctattttt 30763660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36948981 - 36949085
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||| |||||||||||||| |||| |||| || |||| |||||||||||| || || |  | ||| | |||||||||||  ||| ||||||||||| |||    
T  36948981 agtttggattatataatccaaactattttacc-ttaacaaatggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaacgcgccctatt 36949079  T
Q  101 ttttga 106  Q
    ||||||    
T  36949080 ttttga 36949085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 37773851 - 37773954
Alignment:
Q  8 attatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattca--agtaacgcgcccaattttttg 105  Q
    |||||||||| ||||||||||||||  | || || |||||||| || |||||   ||||||||||||||||||   |  || ||||||||| ||||||||    
T  37773851 attatataattcgaactgtttttcctctgaataagggtgtttaaggggtgttcagattctataatccgaaaaaaaaataaggaacgcgccctattttttg 37773950  T
Q  106 aggt 109  Q
    ||||    
T  37773951 aggt 37773954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 45293617 - 45293569
Alignment:
Q  125 tcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||| ||||||||| ||||||| |||||| ||| |||||||||||||    
T  45293617 tcaccccataacaaagaaaaaacttagttcgaattctaaaatctgaaaa 45293569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 34006373 - 34006273
Alignment:
Q  6 ggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttg 105  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||| |||||  |||| | ||||||| |||| ||| ||| | ||||| ||||||||    
T  34006373 ggattatataatctgaactgtttttcccttgaaaaagggtgtttatggggtgttcaaattatgtaatccggaaaaatcatgtagcccgccctattttttg 34006274  T
Q  106 a 106  Q
    |    
T  34006273 a 34006273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 25563576 - 25563642
Alignment:
Q  107 ggtgaaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||| ||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  25563576 ggtggaaaactcttttttttaccctataacaaaggaaaaactcagttcggattctaaaatccgaaaa 25563642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26723529 - 26723587
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtt 59  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||    
T  26723529 agttcggattatataatccgaaccgtttttcccttaaaaaagggtgtttagggggtgtt 26723587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24472868 - 24472975
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccg--aaaaattcaagtaacgcgcccaa 98  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||| ||| ||  |||| | ||||||||||| |  ||||| ||||||| ||| ||| |    
T  24472868 agttcggattatataatccgaattgtttttcccttgaaaaagggtgattaagggatgttaggattctataatctgaaaaaaaatcaagtagcgcacccta 24472967  T
Q  99 ttttttga 106  Q
    ||||||||    
T  24472968 ttttttga 24472975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 800877 - 800948
Alignment:
Q  36 aaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttgag 107  Q
    ||||||||||||||| || ||||| | |||||||||||||||||| |||| ||| |||||| ||||||||||    
T  800877 aaaaaatggtgtttagggggtgttcggattctataatccgaaaaaatcaaataaagcgccctattttttgag 800948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28866671 - 28866774
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||||  | |||||   ||| | ||||||| |||| ||| ||| ||||||| |||    
T  28866671 agttcagattatataatccgaactgtttttccctttaaaaagggtgtttagcgggtgttcagattatgtaatccggaaaaatcatgtagcgcgccctatt 28866770  T
Q  101 tttt 104  Q
    ||||    
T  28866771 tttt 28866774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 6223782 - 6223880
Alignment:
Q  6 ggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatttttt 104  Q
    ||||||||||||||||||||||||| |||| ||||| | ||||||||| ||||| | ||| | |||||| ||||| ||| |||| |||| | |||||||    
T  6223782 ggattatataatccgaactgtttttaccttgaaaaaggatgtttatggggtgttcggattatgtaatccaaaaaaatcatgtaatgcgctctatttttt 6223880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 5210326 - 5210399
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||||||||||| || |||||||||| | |||||||||||||| || ||||| | ||||||||||| ||||||    
T  5210326 gattatataatccaaaatgtttttcccctgaaaaatggtgtttaaggggtgttcggattctataatctgaaaaa 5210399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3561376 - 3561456
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatg-gagtgtttgaattctataatccgaaaaa 80  Q
    ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| | | |||||   ||||||||||||||||||    
T  3561376 agttcggattatataattcgaaccgtttttcccttgaaaaagggtgtttaggagggtgttcagattctataatccgaaaaa 3561456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8704559 - 8704638
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    |||||||||||||||||| ||||| |||||||||| ||| |||||||||| || |||||   ||||||  ||||||||||    
T  8704559 agttcggattatataatctgaactatttttcccttgaaatatggtgtttagggggtgttctgattctaacatccgaaaaa 8704638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 11844320 - 11844253
Alignment:
Q  107 ggtgaaaaactcctt-tcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||||||||| || | ||||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  11844320 ggtgaaaaactctttattttcacccaataacaaaggaaaaacatagttcggattttaaaatctaaaaa 11844253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 8704685 - 8704747
Alignment:
Q  111 aaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||||| ||| | ||||||||||||||||||||| ||||||  |||||||||||| |||||    
T  8704685 aaaaactcatttttccaccctataacaaaggaaaaagtcagtttagattttaaaatccgaaaa 8704747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 7828339 - 7828290
Alignment:
Q  132 ataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaagg 181  Q
    |||| |||||||||||||||||| |||||||||||| ||||| |||||||    
T  7828339 ataagaaaggaaaaactcagttcagattttaaaatccgaaaatctcaagg 7828290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 49677601 - 49677497
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||| |||| |||| ||||  |||||||| || || | || ||| | ||||||| |||  ||| ||||||||||| |||    
T  49677601 agttcggattatataatccgaactg-ttttaccttgaaaaggggtgtttagggggtttctggattatgtaatccggaaacatcatgtaacgcgccctatt 49677503  T
Q  101 ttttga 106  Q
    ||||||    
T  49677502 ttttga 49677497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 40907983 - 40908079
Alignment:
Q  10 tatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttga 106  Q
    |||||||||||||||||||| || | |||||| |||||||| || || || | ||| | |||||||||||  ||| ||| | |||||||||||||||    
T  40907983 tatataatccgaactgttttaccttaaaaaaagggtgtttagggggttttcggattatgtaatccgaaaacatcatgtagcacgcccaattttttga 40908079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 44318880 - 44318820
Alignment:
Q  107 ggtgaaaaactcctttcttcaccctataacaaaggaaaaactcagttcggattttaaaatc 167  Q
    |||||||||||| ||| | ||||| ||| ||||||||||||||| |||||||| |||||||    
T  44318880 ggtgaaaaactcatttttccaccccatatcaaaggaaaaactcaattcggattctaaaatc 44318820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18583585 - 18583687
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| ||||||||||||||||||  |||| |||||||||| |||||||| || || |  | ||| | |||||||||||  ||| ||||||||||| |||    
T  18583585 agttcagattatataatccgaact-attttaccttaaaaaaaggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaacgcgccctatt 18583683  T
Q  101 tttt 104  Q
    ||||    
T  18583684 tttt 18583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 890477 - 890428
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    ||||||| ||||||||| ||||| || ||||||||| |||||||||||||    
T  890477 ttcaccccataacaaagaaaaaattcggttcggattctaaaatctgaaaa 890428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 9446247 - 9446304
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaagg 181  Q
    |||||||||| |||||||||||    |||||||||||||||||| ||||| |||||||    
T  9446247 ttcaccctattacaaaggaaaacacaagttcggattttaaaatccgaaaatctcaagg 9446304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 23442856 - 23442752
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||| ||||||||||||||||||| |||| || |||||||| | |||||  || || |  ||||| ||||||||| |||  ||| ||||||||||| |||    
T  23442856 agtttggattatataatccgaactattttacc-ttaaaaaaagatgtttggggggtttccgaattatataatccggaaacatcatgtaacgcgccctatt 23442758  T
Q  101 ttttga 106  Q
    ||||||    
T  23442757 ttttga 23442752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 25563454 - 25563487
Alignment:
Q  8 attatataatccgaactgtttttcccttaaaaaa 41  Q
    |||||||||||||||||||||||||||| |||||    
T  25563454 attatataatccgaactgtttttcccttgaaaaa 25563487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32817652 - 32817700
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||| ||||||||    
T  32817652 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgttta 32817700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33611451 - 33611499
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||  |||| |||||||||| ||||||||    
T  33611451 agttcggattatataatccgaact-attttaccttaaaaaagggtgttta 33611499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 34006235 - 34006195
Alignment:
Q  108 gtgaaaaactcctttcttcaccctataacaaaggaaaaact 148  Q
    |||||||||||  || |||||||||||||||||||||||||    
T  34006235 gtgaaaaactcaatttttcaccctataacaaaggaaaaact 34006195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 42546085 - 42546057
Alignment:
Q  1 agttcggattatataatccgaactgtttt 29  Q
    |||||||||||||||||||||||||||||    
T  42546085 agttcggattatataatccgaactgtttt 42546057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 3703297 - 3703395
Alignment:
Q  8 attatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttga 106  Q
    ||||||||| |  ||||||||||||||| |||||||||||||| || ||||| ||||| | |||||||||||| ||| ||||| || || |||||||||    
T  3703297 attatataaccataactgtttttcccttgaaaaatggtgtttagggggtgttcgaattatgtaatccgaaaaaatcatgtaacacgtcctattttttga 3703395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8106519 - 8106414
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||||||||||||||| ||||| |||||||||  |||||||||||||| || ||||| | ||| | |||| || |||| ||| ||| ||||||| |||    
T  8106519 agttcggattatataatctgaactatttttccctagaaaaatggtgtttagggggtgttcggattatgtaatacggaaaaatcatgtagcgcgccctatt 8106420  T
Q  101 ttttga 106  Q
    ||||||    
T  8106419 ttttga 8106414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 34972990 - 34972888
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||| || || || | ||| | || ||||||||  ||| ||||||||||| |||    
T  34972990 agttcggattatataatccgaactattttacc-ttaaaaaatggtgtttagggggttttcggattatgtagtccgaaaacatcatgtaacgcgccctatt 34972892  T
Q  101 tttt 104  Q
    ||||    
T  34972891 tttt 34972888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7863363 - 7863250
Alignment:
Q  1 agttcggattatataatccgaactgtttttccctt-aaaaaatggt----gtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcc 95  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| |    |  ||  | ||||| | ||||||||||| |||||| | ||||||||||||    
T  7863363 agttcagattatataatccgaactgtttttcccttgaaaaaatgttcacagggtacagggtgttcggattctataatctgaaaaacttaagtaacgcgcc 7863264  T
Q  96 caattttttgaggt 109  Q
    | ||||||||||||    
T  7863263 ctattttttgaggt 7863250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 37222080 - 37222029
Alignment:
Q  8 attatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtt 59  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||    
T  37222080 attatataatccgaactgtttttcccttgaaaaagggtgtttagagagtgtt 37222029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7863567 - 7863464
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| |||||||||||||||||||||||| |||| |||||  ||||| | || ||||| | ||||||||||  |||||| | |||||||||| |  |||    
T  7863567 agttcagattatataatccgaactgttttttccttgaaaaa--gtgttcacggggtgttcggattctataatatgaaaaacttaagtaacgcgtcttatt 7863470  T
Q  101 ttttga 106  Q
    ||||||    
T  7863469 ttttga 7863464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 5865253 - 5865321
Alignment:
Q  107 ggtgaaaaactcctttctt--caccctataacaaaggaaaaactcagttcggattttaaaatctgaaaa 173  Q
    |||||||||||| ||| ||  ||||| |||||||||||||||||||||||| ||| |||| ||||||||    
T  5865253 ggtgaaaaactctttttttgtcaccccataacaaaggaaaaactcagttcgaattctaaactctgaaaa 5865321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 48319105 - 48319210
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||| ||||||| || | |||||| |||||||| || || || | ||| | ||||||  |||  ||| ||||||||||| |||    
T  48319105 agttcggattatataatccgagctgttttaccttgaaaaaaaggtgtttagggggttttcggattatgtaatccagaaacatcatgtaacgcgccctatt 48319204  T
Q  101 ttttga 106  Q
    ||||||    
T  48319205 ttttga 48319210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 17933179 - 17933226
Alignment:
Q  2 gttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  17933179 gttcggattatataatccgaactg-ttttaccttaaaaaagggtgttta 17933226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 346206 - 346284
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    ||||| |||| ||||||| |||||||||| ||||| || ||||||||||| || ||||| ||||| |||||| |||||||    
T  346206 agttcagattctataatctgaactgtttt-cccttgaataatggtgtttaaggggtgttcgaattatataattcgaaaaa 346284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 41323298 - 41323345
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaa 171  Q
    ||||||||||||||||||||||||| | ||||||||  ||||||||||    
T  41323298 ttcaccctataacaaaggaaaaactgaattcggattacaaaatctgaa 41323345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 47456594 - 47456511
Alignment:
Q  108 gtgaaaaactcctttctt-caccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaagg-cattttcg 189  Q
    ||||||||||| ||| || ||| | |||||||| |||||||||||||||||||| ||||||  |||| ||||||| ||||||||    
T  47456594 gtgaaaaactcttttttttcacgccataacaaatgaaaaactcagttcggatttcaaaatccaaaaatctcaaggacattttcg 47456511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 48095909 - 48095988
Alignment:
Q  2 gttcggattatataatccgaactg-tttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    |||||||||| |||||| |||||| ||||||||  ||||||||||||||| ||  ||||   ||||||||||||||||||    
T  48095909 gttcggattacataatctgaactgctttttccccaaaaaaatggtgtttaggggatgttcagattctataatccgaaaaa 48095988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19835646 - 19835598
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||| ||||||||    
T  19835646 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgttta 19835598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40703790 - 40703742
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||| ||||||||    
T  40703790 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgttta 40703742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 42498079 - 42498132
Alignment:
Q  136 caaaggaaaaactcagttcggattttaaaatctgaaaacctcaaggcattttcg 189  Q
    |||||| |||||||| |||||||| ||||||||||||| | ||| |||||||||    
T  42498079 caaagggaaaactcaattcggattataaaatctgaaaatcacaaagcattttcg 42498132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46440315 - 46440363
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||| ||||||||    
T  46440315 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgttta 46440363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 51515637 - 51515596
Alignment:
Q  55 gtgtttgaattctataatccgaaaaattcaagtaacgcgccc 96  Q
    ||||||||||||||||||||||||||  |||| |||||||||    
T  51515637 gtgtttgaattctataatccgaaaaaagcaagcaacgcgccc 51515596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 32600857 - 32600793
Alignment:
Q  124 ttcaccctataacaaaggaaaaactcagttcggattttaaaatctgaaaacctcaa-ggcatttt 187  Q
    |||||||||||||||| || |||||||||||| ||| ||||||| || || ||||| ||||||||    
T  32600857 ttcaccctataacaaaagacaaactcagttcgaattctaaaatccgataatctcaatggcatttt 32600793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24604402 - 24604507
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| |||||||||||  |||||||||||||||| |||||||||||||| || ||||| | ||| | ||||||||| || ||| ||||  ||||| |||    
T  24604402 agttcagattatataatatgaactgtttttcccttgaaaaatggtgtttaaggggtgttcggattatgtaatccgaagaaatcatgtaagacgccctatt 24604501  T
Q  101 ttttga 106  Q
    ||||||    
T  24604502 ttttga 24604507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5638980 - 5638879
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||| ||| | ||  |||| | ||||||| |||  ||| ||||||||||| |||    
T  5638980 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgtttagggatttttcaaattatgtaatccggaaacatcatgtaacgcgccctatt 5638882  T
Q  101 ttt 103  Q
    |||    
T  5638881 ttt 5638879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 10310443 - 10310521
Alignment:
Q  2 gttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaa 80  Q
    |||| |||||||||||||||||||||||| || | || || |||||||| || ||||| | |||||||||||| |||||    
T  10310443 gttctgattatataatccgaactgttttttccctgaataagggtgtttagggggtgttcggattctataatccaaaaaa 10310521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29289666 - 29289751
Alignment:
Q  1 agttcggattatataatccgaactgtttttccctt-aaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaa 85  Q
    ||||| |||||||||||||||| |||||||| ||| ||||||||||||||| || |||||   ||| ||||||||| |||| ||||    
T  29289666 agttcagattatataatccgaattgtttttcacttgaaaaaatggtgtttaaggggtgttcagattatataatccggaaaaatcaa 29289751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 6704276 - 6704323
Alignment:
Q  119 ctttcttcaccctataacaaaggaaaaactcagttcggattttaaaat 166  Q
    |||| ||||||||||||||||||||||| ||||||| |||| ||||||    
T  6704276 cttttttcaccctataacaaaggaaaaattcagttcagattctaaaat 6704323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2539569 - 2539521
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| ||||| ||||||||    
T  2539569 agttcggattatataatccgaactg-ttttaccttgaaaaagggtgttta 2539521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3717324 - 3717372
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||||||||||| |||| |||| |||||| |||||||    
T  3717324 agttcggattatataatccgaactg-ttttaccttgaaaaattgtgttta 3717372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 9905229 - 9905132
Alignment:
Q  9 ttatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaattttttga 106  Q
    ||||||||||| |||| |||||||||| ||  |||| ||||| || ||||| | ||| | ||||||| |||| ||| ||| ||||||| |||||||||    
T  9905229 ttatataatccaaactatttttcccttgaatgatggcgtttagggggtgttcggattatgtaatccggaaaaatcacgtagcgcgccctattttttga 9905132  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 14587607 - 14587703
Alignment:
Q  7 gattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatttttt 104  Q
    ||||||||||||||||||| |||| |||| |||||||||||||| || || | || ||| | ||||| | |||  ||| ||||||||||| |||||||    
T  14587607 gattatataatccgaactg-ttttaccttgaaaaatggtgtttagggggtttatggattatgtaatcaggaaacatcatgtaacgcgccctatttttt 14587703  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23406914 - 23406866
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgttta 50  Q
    ||||||||||||||||| ||||||| |||| |||| ||||||||||||||    
T  23406914 agttcggattatataattcgaactg-ttttaccttgaaaaatggtgttta 23406866  T

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Target: scaffold0508 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3436 - 3540
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaaaaattcaagtaacgcgcccaatt 100  Q
    ||||| ||||||||||||||||||| |||| |||| ||||| ||||||||||| || |  | ||| | ||||||| |||  ||| ||||||||||| |||    
T  3436 agttcagattatataatccgaactg-ttttaccttgaaaaagggtgtttatggggtttccggattatgtaatccggaaacatcatgtaacgcgccctatt 3534  T
Q  101 ttttga 106  Q
    ||||||    
T  3535 ttttga 3540  T

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Target: scaffold0091 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2104 - 2180
Alignment:
Q  1 agttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatggagtgtttgaattctataatccgaa 77  Q
    ||||| |||||||||||| |||||||||||||| | ||||| || | |||||| ||||||| ||| || ||||||||    
T  2104 agttcagattatataatctgaactgtttttcccctgaaaaagggcgattatggggtgtttggattataaaatccgaa 2180  T

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Target: scaffold0137 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 9538 - 9566
Alignment:
Q  1 agttcggattatataatccgaactgtttt 29  Q
    |||||||||||||||||||||||||||||    
T  9538 agttcggattatataatccgaactgtttt 9566  T

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