View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13295_high_29 (Length: 404)
Name: NF13295_high_29
Description: NF13295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13295_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 11 - 394
Target Start/End: Original strand, 7245566 - 7245949
Alignment:
| Q |
11 |
cataggaatgatgataaatgataatcaacctgttggaattctggagttagaagcaagatctagccaggaatctgtgttctttggtgtccactcaccaaag |
110 |
Q |
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| T |
7245566 |
cataggaatgatgataaatgataatcaacctgttggaattctggagttagaagcaagatctagccaggaatctgtgttctttggtgtccactcaccaaag |
7245665 |
T |
|
| Q |
111 |
aaatgatgaagtggtttctgagttgtctcactttctttgtccttgtttgttgttcttgttgacttgatgtcagtgcctaaaacaaaacagtgttgttctt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7245666 |
aaatgatgaagtggtttctgagttgtctcactttctttgtccttgtttgttgttcttgttgacttgatgtcagtgcctaaaacaaaacagtgttgttctt |
7245765 |
T |
|
| Q |
211 |
gttgttgtcttgaattatcatcattgatattttgaaagtgtgagcttgagtaagacttaaagggattcattgatagttgttgttgatatgaatcatgata |
310 |
Q |
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||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7245766 |
gttgttgtcttgaattatcatcattgatattctgaaactgtgagcttgagtaagacttaaagggattcattgatagttgttgttgatatgaatcatgata |
7245865 |
T |
|
| Q |
311 |
acagctcctagatgaacctgtagcttctggaaagaaagttctcttatccacagtaccatctcttattccttgaacttgcctcct |
394 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
7245866 |
acagctcctagatgaacctgtagcttctggaaagaaagttctctcatccacagtaccatctcttattccttgaacttgcctcct |
7245949 |
T |
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