View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13295_high_55 (Length: 252)
Name: NF13295_high_55
Description: NF13295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13295_high_55 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 16357292 - 16357526
Alignment:
| Q |
18 |
cttgttagaataattctacgaacaattgaggtcaaatgtagatgatgcaaattaatttgaggtcgagttggagcctacagttacaaaaagctcaatgtcg |
117 |
Q |
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| T |
16357292 |
cttgttagaataattctacgaacaattgaggtcaaatgtagatgatgcaaattaatttgaggtcgagttggagcctacagttacaaaaagctcgatgtgg |
16357391 |
T |
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| Q |
118 |
cagcccagatagcagtcgatcaaagatgacgctagtaatactcccatgacgaaagttgctcctcgaggcgaagtccactatcaacagcacataaatgcca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16357392 |
cagcccagatagcagtcgatcaaagatgacgctagtaatactcccatgacgaaagttgctcctcgaggcgaagtccactatcaacagcacataaatgcca |
16357491 |
T |
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| Q |
218 |
agaagaagaataagaaagaattccattttttccat |
252 |
Q |
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||||||| ||||||||||||||||||||||||||| |
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| T |
16357492 |
agaagaataataagaaagaattccattttttccat |
16357526 |
T |
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