View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13295_low_57 (Length: 250)

Name: NF13295_low_57
Description: NF13295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13295_low_57
NF13295_low_57
[»] chr8 (54 HSPs)
chr8 (30-240)||(15976648-15976868)
chr8 (30-238)||(21603723-21603941)
chr8 (28-229)||(17014866-17015077)
chr8 (35-240)||(17287786-17288001)
chr8 (28-229)||(17542124-17542335)
chr8 (30-239)||(20257189-20257408)
chr8 (30-240)||(25164577-25164797)
chr8 (30-240)||(19940404-19940624)
chr8 (30-240)||(22672095-22672315)
chr8 (52-240)||(18152638-18152836)
chr8 (30-208)||(20260483-20260671)
chr8 (30-208)||(21047113-21047301)
chr8 (30-238)||(19941537-19941755)
chr8 (142-238)||(22463084-22463180)
chr8 (89-232)||(13690113-13690262)
chr8 (89-232)||(19233959-19234108)
chr8 (35-232)||(29085505-29085721)
chr8 (91-232)||(19427505-19427652)
chr8 (165-232)||(3350178-3350245)
chr8 (165-232)||(9366957-9367024)
chr8 (165-232)||(15782254-15782321)
chr8 (165-232)||(26119573-26119640)
chr8 (165-232)||(30316268-30316335)
chr8 (165-232)||(32079239-32079306)
chr8 (165-232)||(36087185-36087252)
chr8 (165-232)||(36302189-36302256)
chr8 (165-232)||(44490377-44490444)
chr8 (35-238)||(21297246-21297459)
chr8 (168-232)||(16745667-16745731)
chr8 (35-78)||(250922-250965)
chr8 (165-232)||(251071-251138)
chr8 (35-78)||(814023-814066)
chr8 (165-232)||(814172-814239)
chr8 (35-78)||(3350351-3350394)
chr8 (35-232)||(3842052-3842259)
chr8 (35-78)||(9366808-9366851)
chr8 (35-78)||(13690286-13690329)
chr8 (35-78)||(15782427-15782470)
chr8 (35-78)||(16745515-16745558)
chr8 (35-78)||(19137794-19137837)
chr8 (165-232)||(19137943-19138010)
chr8 (35-78)||(19233892-19233935)
chr8 (35-78)||(19427436-19427479)
chr8 (35-78)||(26119424-26119467)
chr8 (35-78)||(29075254-29075297)
chr8 (165-232)||(29075403-29075470)
chr8 (35-78)||(30316441-30316484)
chr8 (35-78)||(32079412-32079455)
chr8 (35-78)||(36087036-36087079)
chr8 (35-78)||(44490228-44490271)
chr8 (35-78)||(23791755-23791798)
chr8 (35-78)||(36302040-36302083)
chr8 (168-226)||(23791898-23791956)
chr8 (168-232)||(22149148-22149212)
[»] scaffold0359 (1 HSPs)
scaffold0359 (30-240)||(7264-7484)
[»] chr3 (95 HSPs)
chr3 (30-240)||(2559507-2559727)
chr3 (30-240)||(18123279-18123499)
chr3 (30-240)||(11188308-11188528)
chr3 (30-240)||(17244813-17245033)
chr3 (30-238)||(14908303-14908518)
chr3 (34-238)||(16029327-16029541)
chr3 (61-238)||(19886712-19886897)
chr3 (152-240)||(5211122-5211210)
chr3 (154-240)||(53058347-53058433)
chr3 (86-232)||(14078951-14079103)
chr3 (35-232)||(9382172-9382388)
chr3 (96-232)||(11207603-11207745)
chr3 (35-235)||(17016297-17016507)
chr3 (35-232)||(9983396-9983612)
chr3 (30-85)||(5211048-5211103)
chr3 (165-232)||(6183474-6183541)
chr3 (165-232)||(10628456-10628523)
chr3 (165-232)||(13374176-13374243)
chr3 (165-232)||(13384770-13384837)
chr3 (165-232)||(16397528-16397595)
chr3 (89-232)||(11273893-11274042)
chr3 (89-232)||(12239126-12239275)
chr3 (35-232)||(12288488-12288704)
chr3 (102-232)||(28315746-28315882)
chr3 (102-232)||(38203845-38203981)
chr3 (165-232)||(4752981-4753048)
chr3 (165-232)||(5538529-5538596)
chr3 (165-232)||(5581141-5581208)
chr3 (165-232)||(5867204-5867271)
chr3 (165-232)||(6491854-6491921)
chr3 (165-232)||(7796129-7796196)
chr3 (96-232)||(8997459-8997601)
chr3 (165-232)||(14474883-14474950)
chr3 (165-232)||(16392556-16392623)
chr3 (165-232)||(19787684-19787751)
chr3 (165-232)||(23766556-23766623)
chr3 (165-232)||(24385026-24385093)
chr3 (165-232)||(24669132-24669199)
chr3 (165-232)||(29462726-29462793)
chr3 (35-232)||(29935071-29935278)
chr3 (35-232)||(29984225-29984432)
chr3 (165-232)||(39381346-39381413)
chr3 (165-232)||(41692911-41692978)
chr3 (102-232)||(8783856-8783992)
chr3 (178-235)||(12754290-12754347)
chr3 (168-232)||(1785585-1785649)
chr3 (168-232)||(4432425-4432489)
chr3 (168-232)||(14312920-14312984)
chr3 (165-232)||(505678-505745)
chr3 (35-78)||(505851-505894)
chr3 (35-78)||(4432273-4432316)
chr3 (35-78)||(4752832-4752875)
chr3 (35-78)||(5519381-5519424)
chr3 (165-232)||(5519530-5519597)
chr3 (35-78)||(5538702-5538745)
chr3 (35-78)||(5581314-5581357)
chr3 (35-78)||(5867377-5867420)
chr3 (35-78)||(6183647-6183690)
chr3 (35-78)||(8783776-8783819)
chr3 (35-78)||(10628629-10628672)
chr3 (35-78)||(11274066-11274109)
chr3 (35-78)||(13130783-13130826)
chr3 (165-232)||(13130932-13130999)
chr3 (96-232)||(13263181-13263323)
chr3 (35-78)||(13374349-13374392)
chr3 (35-78)||(13384943-13384986)
chr3 (35-78)||(14474734-14474777)
chr3 (180-235)||(15847571-15847626)
chr3 (167-238)||(16306630-16306701)
chr3 (35-78)||(16392729-16392772)
chr3 (35-78)||(16397701-16397744)
chr3 (35-78)||(19787535-19787578)
chr3 (165-232)||(20674705-20674772)
chr3 (35-78)||(20674878-20674921)
chr3 (35-78)||(24385199-24385242)
chr3 (35-78)||(24668983-24669026)
chr3 (35-78)||(37875574-37875617)
chr3 (35-78)||(37884092-37884135)
chr3 (35-78)||(38203765-38203808)
chr3 (35-78)||(39381197-39381240)
chr3 (35-78)||(41692762-41692805)
chr3 (166-232)||(37875724-37875790)
chr3 (166-232)||(37884242-37884308)
chr3 (35-78)||(7796302-7796345)
chr3 (35-78)||(8997632-8997675)
chr3 (35-78)||(11207776-11207819)
chr3 (35-78)||(12239299-12239342)
chr3 (35-78)||(13263354-13263397)
chr3 (35-78)||(23766407-23766450)
chr3 (35-78)||(28315919-28315962)
chr3 (168-232)||(1062800-1062864)
chr3 (35-78)||(6492027-6492070)
chr3 (35-78)||(14313093-14313136)
chr3 (35-78)||(15847431-15847474)
chr3 (168-226)||(15652623-15652681)
[»] chr4 (55 HSPs)
chr4 (31-240)||(14905904-14906123)
chr4 (30-240)||(16852220-16852440)
chr4 (30-240)||(17245882-17246102)
chr4 (44-237)||(10662770-10662973)
chr4 (44-237)||(10876915-10877118)
chr4 (35-232)||(18065102-18065318)
chr4 (96-232)||(16315928-16316070)
chr4 (35-232)||(5021263-5021479)
chr4 (89-232)||(27665767-27665916)
chr4 (35-232)||(4989307-4989523)
chr4 (102-232)||(14837620-14837756)
chr4 (102-232)||(24649538-24649674)
chr4 (165-232)||(459839-459906)
chr4 (165-232)||(10742110-10742177)
chr4 (165-232)||(10955879-10955946)
chr4 (165-232)||(16265141-16265208)
chr4 (165-232)||(17927375-17927442)
chr4 (165-232)||(18131761-18131828)
chr4 (165-232)||(18754002-18754069)
chr4 (165-232)||(19945850-19945917)
chr4 (165-232)||(22005693-22005760)
chr4 (165-232)||(27175350-27175417)
chr4 (165-232)||(30928005-30928072)
chr4 (165-232)||(36027567-36027634)
chr4 (165-232)||(49516813-49516880)
chr4 (102-232)||(55746764-55746900)
chr4 (168-232)||(15195437-15195501)
chr4 (35-78)||(459690-459733)
chr4 (35-78)||(3380629-3380672)
chr4 (35-78)||(10742283-10742326)
chr4 (35-78)||(10956052-10956095)
chr4 (35-78)||(14837793-14837836)
chr4 (35-78)||(15198489-15198532)
chr4 (35-78)||(16264992-16265035)
chr4 (35-78)||(16315854-16315897)
chr4 (35-78)||(17927226-17927269)
chr4 (35-78)||(18131934-18131977)
chr4 (35-78)||(18754175-18754218)
chr4 (35-78)||(19946023-19946066)
chr4 (35-78)||(22005544-22005587)
chr4 (35-78)||(24649458-24649501)
chr4 (35-78)||(27175200-27175243)
chr4 (35-78)||(27665700-27665743)
chr4 (165-232)||(27816458-27816525)
chr4 (35-78)||(27816631-27816674)
chr4 (35-78)||(30928178-30928221)
chr4 (35-78)||(36027418-36027461)
chr4 (165-232)||(40455872-40455939)
chr4 (35-78)||(40456045-40456088)
chr4 (35-78)||(49516664-49516707)
chr4 (35-78)||(55746937-55746980)
chr4 (177-232)||(3380790-3380845)
chr4 (35-78)||(14712499-14712542)
chr4 (168-232)||(14712335-14712399)
chr4 (89-139)||(19945949-19945999)
[»] chr7 (61 HSPs)
chr7 (30-240)||(13680653-13680873)
chr7 (30-236)||(13878449-13878665)
chr7 (30-240)||(14171970-14172190)
chr7 (35-239)||(16547628-16547842)
chr7 (35-239)||(16617820-16618034)
chr7 (30-238)||(13173846-13174064)
chr7 (30-240)||(16311609-16311828)
chr7 (46-238)||(13028559-13028761)
chr7 (30-238)||(16669765-16669998)
chr7 (30-238)||(17644133-17644366)
chr7 (142-240)||(4413597-4413695)
chr7 (164-238)||(21212214-21212288)
chr7 (96-232)||(9168750-9168892)
chr7 (89-232)||(6868822-6868971)
chr7 (35-235)||(13176082-13176291)
chr7 (102-232)||(11014363-11014499)
chr7 (165-232)||(176134-176201)
chr7 (165-232)||(458578-458645)
chr7 (165-232)||(1996800-1996867)
chr7 (165-232)||(2707205-2707272)
chr7 (165-232)||(4221252-4221319)
chr7 (165-232)||(8626589-8626656)
chr7 (165-232)||(9442507-9442574)
chr7 (165-232)||(11003823-11003890)
chr7 (165-232)||(20988301-20988368)
chr7 (165-232)||(22098385-22098452)
chr7 (165-232)||(24743345-24743412)
chr7 (165-232)||(26391686-26391753)
chr7 (165-232)||(40043696-40043763)
chr7 (165-232)||(42875092-42875159)
chr7 (89-232)||(15879414-15879563)
chr7 (102-232)||(8003658-8003794)
chr7 (102-232)||(9093562-9093698)
chr7 (35-78)||(175985-176028)
chr7 (35-78)||(458751-458794)
chr7 (35-78)||(1996651-1996694)
chr7 (35-78)||(2707378-2707421)
chr7 (35-78)||(4221103-4221146)
chr7 (35-78)||(6868995-6869038)
chr7 (35-78)||(8003831-8003874)
chr7 (35-78)||(8626440-8626483)
chr7 (35-78)||(9093482-9093525)
chr7 (35-78)||(9168676-9168719)
chr7 (35-78)||(9442358-9442401)
chr7 (35-78)||(11003674-11003717)
chr7 (35-78)||(11014283-11014326)
chr7 (35-78)||(15879587-15879630)
chr7 (165-232)||(17951706-17951773)
chr7 (35-78)||(17951879-17951922)
chr7 (35-232)||(18439699-18439906)
chr7 (35-78)||(20988152-20988195)
chr7 (35-78)||(22098236-22098279)
chr7 (35-78)||(24743196-24743239)
chr7 (35-78)||(26391859-26391902)
chr7 (165-232)||(26654928-26654995)
chr7 (35-78)||(26655101-26655144)
chr7 (35-78)||(40043869-40043912)
chr7 (35-78)||(42874943-42874986)
chr7 (182-238)||(16106650-16106706)
chr7 (30-77)||(4413779-4413826)
chr7 (142-232)||(16309336-16309426)
[»] chr6 (60 HSPs)
chr6 (30-228)||(26940711-26940919)
chr6 (34-238)||(19450385-19450596)
chr6 (34-238)||(19448391-19448602)
chr6 (30-228)||(17926093-17926301)
chr6 (35-240)||(14054904-14055119)
chr6 (89-232)||(27502838-27502987)
chr6 (89-232)||(28253086-28253235)
chr6 (89-232)||(28331835-28331984)
chr6 (35-232)||(27383204-27383420)
chr6 (35-232)||(27473588-27473804)
chr6 (165-232)||(9114011-9114078)
chr6 (96-230)||(25804209-25804349)
chr6 (167-232)||(26042813-26042878)
chr6 (144-232)||(17447272-17447360)
chr6 (165-232)||(3670660-3670727)
chr6 (165-232)||(12718354-12718421)
chr6 (35-232)||(22307269-22307476)
chr6 (165-232)||(25984693-25984760)
chr6 (165-232)||(26034636-26034703)
chr6 (165-232)||(26874018-26874085)
chr6 (165-232)||(27350961-27351028)
chr6 (165-232)||(27411701-27411768)
chr6 (165-232)||(32302564-32302631)
chr6 (165-232)||(32963464-32963531)
chr6 (165-232)||(34808680-34808747)
chr6 (89-228)||(20031443-20031588)
chr6 (168-232)||(18553908-18553972)
chr6 (35-78)||(3670511-3670554)
chr6 (35-78)||(12863998-12864041)
chr6 (165-232)||(12864147-12864214)
chr6 (147-230)||(13138005-13138088)
chr6 (35-78)||(16958075-16958118)
chr6 (35-232)||(17610112-17610319)
chr6 (35-78)||(20031612-20031655)
chr6 (35-78)||(25984544-25984587)
chr6 (35-78)||(26034487-26034530)
chr6 (35-78)||(26042662-26042705)
chr6 (35-78)||(26873869-26873912)
chr6 (35-78)||(27350812-27350855)
chr6 (35-78)||(27411552-27411595)
chr6 (35-78)||(28253259-28253302)
chr6 (35-78)||(28332008-28332051)
chr6 (35-78)||(32302737-32302780)
chr6 (35-78)||(32963637-32963680)
chr6 (35-78)||(34808853-34808896)
chr6 (166-232)||(16958225-16958291)
chr6 (178-235)||(22385237-22385294)
chr6 (168-235)||(11204583-11204650)
chr6 (35-74)||(12718531-12718570)
chr6 (35-78)||(17056529-17056572)
chr6 (35-78)||(25723418-25723461)
chr6 (35-78)||(27502771-27502814)
chr6 (37-77)||(18553768-18553808)
chr6 (35-78)||(9114184-9114227)
chr6 (35-78)||(11204439-11204482)
chr6 (35-78)||(22385084-22385127)
chr6 (35-78)||(25804135-25804178)
chr6 (32-74)||(19874216-19874258)
chr6 (37-74)||(17447440-17447477)
chr6 (168-232)||(17062840-17062904)
[»] chr5 (93 HSPs)
chr5 (30-240)||(26782732-26782952)
chr5 (30-240)||(26763769-26763988)
chr5 (30-238)||(21200627-21200845)
chr5 (89-232)||(23394040-23394189)
chr5 (35-235)||(23486917-23487127)
chr5 (96-232)||(24981898-24982040)
chr5 (35-238)||(11209620-11209833)
chr5 (165-232)||(31420296-31420363)
chr5 (96-232)||(34053591-34053733)
chr5 (89-232)||(39354127-39354276)
chr5 (165-232)||(5299705-5299772)
chr5 (165-232)||(6977437-6977504)
chr5 (165-232)||(9337585-9337652)
chr5 (165-232)||(14031673-14031740)
chr5 (165-232)||(14456175-14456242)
chr5 (165-232)||(14567216-14567283)
chr5 (165-232)||(15741600-15741667)
chr5 (165-232)||(16002459-16002526)
chr5 (165-232)||(17608693-17608760)
chr5 (165-232)||(17720549-17720616)
chr5 (165-232)||(22148147-22148214)
chr5 (165-232)||(22677747-22677814)
chr5 (165-232)||(23297908-23297975)
chr5 (165-232)||(23363727-23363794)
chr5 (165-232)||(23698411-23698478)
chr5 (165-232)||(24568719-24568786)
chr5 (165-232)||(27051400-27051467)
chr5 (165-232)||(27461793-27461860)
chr5 (165-232)||(30236589-30236656)
chr5 (165-232)||(31350165-31350232)
chr5 (165-232)||(31835111-31835178)
chr5 (165-232)||(34773540-34773607)
chr5 (165-232)||(35217134-35217201)
chr5 (165-232)||(36591680-36591747)
chr5 (165-232)||(36689329-36689396)
chr5 (165-232)||(39500050-39500117)
chr5 (165-232)||(40391989-40392056)
chr5 (165-232)||(42044411-42044478)
chr5 (102-232)||(37739061-37739197)
chr5 (168-232)||(17455879-17455943)
chr5 (35-78)||(1120316-1120359)
chr5 (165-232)||(1120465-1120532)
chr5 (35-78)||(5299556-5299599)
chr5 (35-78)||(6977610-6977653)
chr5 (35-78)||(9337758-9337801)
chr5 (35-78)||(14031846-14031889)
chr5 (35-78)||(14456026-14456069)
chr5 (35-78)||(14567067-14567110)
chr5 (35-78)||(15741773-15741816)
chr5 (35-78)||(17455727-17455770)
chr5 (35-78)||(17608866-17608909)
chr5 (35-78)||(17720722-17720765)
chr5 (35-78)||(21704378-21704421)
chr5 (35-78)||(22148320-22148363)
chr5 (35-78)||(22677920-22677963)
chr5 (35-78)||(23298081-23298124)
chr5 (35-78)||(23363900-23363943)
chr5 (35-78)||(23394213-23394256)
chr5 (35-78)||(23698584-23698627)
chr5 (35-78)||(24568892-24568935)
chr5 (35-78)||(24809720-24809763)
chr5 (35-78)||(24825889-24825932)
chr5 (165-232)||(24826038-24826105)
chr5 (35-78)||(24981824-24981867)
chr5 (35-78)||(27051251-27051294)
chr5 (35-78)||(27461966-27462009)
chr5 (35-78)||(27621186-27621229)
chr5 (165-232)||(27621335-27621402)
chr5 (35-78)||(30236440-30236483)
chr5 (35-78)||(31350338-31350381)
chr5 (35-78)||(31420469-31420512)
chr5 (35-78)||(31835284-31835327)
chr5 (35-78)||(34053764-34053807)
chr5 (35-78)||(34773713-34773756)
chr5 (35-78)||(35217307-35217350)
chr5 (35-78)||(36689502-36689545)
chr5 (35-78)||(37738981-37739024)
chr5 (35-78)||(39499901-39499944)
chr5 (35-78)||(40392162-40392205)
chr5 (35-78)||(42044584-42044627)
chr5 (35-78)||(43620308-43620351)
chr5 (89-232)||(43620375-43620524)
chr5 (102-232)||(19465603-19465739)
chr5 (96-226)||(21704452-21704588)
chr5 (102-232)||(24809547-24809683)
chr5 (180-232)||(20553446-20553498)
chr5 (35-78)||(13532291-13532334)
chr5 (35-78)||(16002310-16002353)
chr5 (35-78)||(19465776-19465819)
chr5 (35-78)||(20553619-20553662)
chr5 (35-78)||(36591531-36591574)
chr5 (35-78)||(39354300-39354343)
chr5 (168-226)||(13532434-13532492)
[»] scaffold0022 (5 HSPs)
scaffold0022 (30-240)||(35743-35963)
scaffold0022 (30-240)||(133803-134023)
scaffold0022 (33-238)||(157451-157663)
scaffold0022 (165-232)||(45306-45373)
scaffold0022 (35-74)||(45518-45557)
[»] scaffold0317 (1 HSPs)
scaffold0317 (30-226)||(2546-2752)
[»] chr2 (56 HSPs)
chr2 (30-240)||(22253908-22254128)
chr2 (30-240)||(28702792-28703012)
chr2 (30-238)||(24723683-24723897)
chr2 (34-238)||(22783199-22783413)
chr2 (142-240)||(21137531-21137629)
chr2 (30-189)||(23185816-23185982)
chr2 (30-189)||(23597079-23597245)
chr2 (165-232)||(21163475-21163542)
chr2 (185-240)||(24574502-24574557)
chr2 (144-230)||(10900079-10900165)
chr2 (89-232)||(24416554-24416703)
chr2 (180-238)||(24842658-24842716)
chr2 (35-232)||(24329277-24329493)
chr2 (102-232)||(27230587-27230723)
chr2 (102-232)||(35262152-35262288)
chr2 (102-232)||(35272777-35272913)
chr2 (165-232)||(4219113-4219180)
chr2 (165-232)||(9899101-9899168)
chr2 (165-232)||(10276204-10276271)
chr2 (165-232)||(11396700-11396767)
chr2 (165-232)||(22916388-22916455)
chr2 (165-232)||(34791745-34791812)
chr2 (165-232)||(39171622-39171689)
chr2 (165-232)||(40249826-40249893)
chr2 (35-78)||(4218964-4219007)
chr2 (165-232)||(9764291-9764358)
chr2 (35-78)||(9764464-9764507)
chr2 (35-78)||(9899274-9899317)
chr2 (35-78)||(10276055-10276098)
chr2 (35-78)||(11396873-11396916)
chr2 (35-78)||(21163648-21163691)
chr2 (35-78)||(26876036-26876079)
chr2 (96-232)||(26876110-26876252)
chr2 (35-78)||(27230507-27230550)
chr2 (35-78)||(28723019-28723062)
chr2 (35-78)||(29253288-29253331)
chr2 (35-78)||(34791918-34791961)
chr2 (35-78)||(35262072-35262115)
chr2 (35-78)||(35272697-35272740)
chr2 (35-78)||(39171795-39171838)
chr2 (35-78)||(40249677-40249720)
chr2 (165-232)||(43091896-43091963)
chr2 (35-78)||(43353498-43353541)
chr2 (165-232)||(43353647-43353714)
chr2 (168-232)||(19303956-19304020)
chr2 (168-232)||(24303627-24303691)
chr2 (168-228)||(28722850-28722910)
chr2 (35-78)||(19301671-19301714)
chr2 (35-78)||(19304120-19304163)
chr2 (35-78)||(22916561-22916604)
chr2 (35-78)||(24416727-24416770)
chr2 (35-78)||(24803343-24803386)
chr2 (165-232)||(29253437-29253504)
chr2 (35-78)||(43091747-43091790)
chr2 (177-235)||(24803176-24803234)
chr2 (167-227)||(21919643-21919703)
[»] chr1 (45 HSPs)
chr1 (30-238)||(18613475-18613693)
chr1 (30-231)||(17720183-17720391)
chr1 (34-240)||(25449822-25450038)
chr1 (30-238)||(21196259-21196474)
chr1 (34-240)||(21125928-21126144)
chr1 (30-192)||(22444931-22445103)
chr1 (30-192)||(22450165-22450337)
chr1 (34-240)||(21207377-21207593)
chr1 (30-238)||(23023176-23023394)
chr1 (30-216)||(20943070-20943272)
chr1 (188-240)||(22431528-22431580)
chr1 (89-232)||(4176424-4176573)
chr1 (89-232)||(7691021-7691170)
chr1 (35-235)||(22017627-22017837)
chr1 (89-232)||(35639589-35639738)
chr1 (165-232)||(3180805-3180872)
chr1 (165-232)||(5641260-5641327)
chr1 (165-232)||(5842408-5842475)
chr1 (165-232)||(7516478-7516545)
chr1 (165-232)||(12615873-12615940)
chr1 (165-232)||(12739732-12739799)
chr1 (165-232)||(21876352-21876419)
chr1 (165-232)||(36237980-36238047)
chr1 (165-232)||(38093663-38093730)
chr1 (165-232)||(38104289-38104356)
chr1 (165-232)||(47609486-47609553)
chr1 (165-232)||(51630742-51630809)
chr1 (35-78)||(3180656-3180699)
chr1 (35-78)||(5641440-5641483)
chr1 (35-78)||(5842259-5842302)
chr1 (35-78)||(7516329-7516372)
chr1 (35-78)||(7691194-7691237)
chr1 (35-78)||(12616046-12616089)
chr1 (165-232)||(19186409-19186476)
chr1 (35-232)||(20874779-20874986)
chr1 (35-78)||(21876203-21876246)
chr1 (35-78)||(35639762-35639805)
chr1 (35-78)||(36238153-36238196)
chr1 (35-78)||(38104140-38104183)
chr1 (35-78)||(47609659-47609702)
chr1 (35-78)||(51630915-51630958)
chr1 (35-78)||(4176357-4176400)
chr1 (35-78)||(19186260-19186303)
chr1 (36-78)||(12739584-12739626)
chr1 (33-78)||(27857098-27857143)
[»] scaffold0084 (1 HSPs)
scaffold0084 (30-240)||(47624-47843)
[»] scaffold0004 (1 HSPs)
scaffold0004 (30-240)||(209713-209933)
[»] scaffold0083 (1 HSPs)
scaffold0083 (30-211)||(43324-43515)
[»] scaffold0056 (1 HSPs)
scaffold0056 (34-240)||(27228-27444)
[»] scaffold0035 (1 HSPs)
scaffold0035 (30-240)||(111179-111399)
[»] scaffold0389 (1 HSPs)
scaffold0389 (31-232)||(12264-12472)
[»] scaffold0047 (3 HSPs)
scaffold0047 (30-238)||(6967-7182)
scaffold0047 (102-232)||(34454-34590)
scaffold0047 (35-78)||(34627-34670)
[»] scaffold0161 (2 HSPs)
scaffold0161 (30-238)||(11651-11869)
scaffold0161 (30-238)||(16324-16542)
[»] scaffold0011 (2 HSPs)
scaffold0011 (37-240)||(66960-67173)
scaffold0011 (35-238)||(166247-166460)
[»] scaffold0315 (1 HSPs)
scaffold0315 (30-238)||(6979-7193)
[»] scaffold0498 (1 HSPs)
scaffold0498 (30-228)||(1782-1990)
[»] scaffold0217 (2 HSPs)
scaffold0217 (142-240)||(17549-17647)
scaffold0217 (30-80)||(14581-14631)
[»] scaffold0116 (1 HSPs)
scaffold0116 (30-198)||(25711-25888)
[»] scaffold0012 (1 HSPs)
scaffold0012 (35-235)||(3057-3267)
[»] scaffold0630 (1 HSPs)
scaffold0630 (35-126)||(3840-3935)
[»] scaffold0038 (1 HSPs)
scaffold0038 (165-232)||(53286-53353)
[»] scaffold0017 (2 HSPs)
scaffold0017 (35-235)||(44735-44945)
scaffold0017 (35-235)||(55038-55248)
[»] scaffold0211 (2 HSPs)
scaffold0211 (35-238)||(1235-1448)
scaffold0211 (167-238)||(1089-1160)
[»] scaffold0037 (1 HSPs)
scaffold0037 (35-232)||(75576-75784)
[»] scaffold0272 (1 HSPs)
scaffold0272 (35-232)||(23737-23953)
[»] scaffold0105 (2 HSPs)
scaffold0105 (165-232)||(38506-38573)
scaffold0105 (35-78)||(38679-38722)
[»] scaffold1820 (1 HSPs)
scaffold1820 (168-238)||(84-154)
[»] scaffold0382 (1 HSPs)
scaffold0382 (35-235)||(2838-3049)
[»] scaffold1507 (1 HSPs)
scaffold1507 (35-232)||(931-1138)
[»] scaffold0068 (2 HSPs)
scaffold0068 (35-78)||(9489-9532)
scaffold0068 (96-226)||(9322-9458)
[»] scaffold0042 (1 HSPs)
scaffold0042 (35-232)||(3796-4003)
[»] scaffold0925 (2 HSPs)
scaffold0925 (178-235)||(3775-3832)
scaffold0925 (35-78)||(3942-3985)
[»] scaffold0758 (1 HSPs)
scaffold0758 (167-235)||(2807-2875)
[»] scaffold0892 (1 HSPs)
scaffold0892 (35-78)||(122-165)
[»] scaffold0443 (1 HSPs)
scaffold0443 (186-240)||(2555-2609)
[»] scaffold0185 (1 HSPs)
scaffold0185 (177-235)||(31752-31810)
[»] scaffold0231 (1 HSPs)
scaffold0231 (37-127)||(20161-20255)


Alignment Details
Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 15976648 - 15976868
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    |||||||||||||||||||||||||||||||  |||| ||    
T  15976648 agtaggatcttcatcagaatctccatcaggtgattcttcttcaaattcaacaactttaagagcttttgatgacttccctttagatggtagagtaatgtat 15976747  T
Q  126 ttactattcttagaaggtt------cattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||| |||||||||      |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15976748 ttactcttcctagaaggtttatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 15976847  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  15976848 cctcaatagcagtcacctttg 15976868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 21603941 - 21603723
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||| |||    
T  21603941 agtagaatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatagat 21603842  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| ||      ||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  21603841 ttactcttcttagcagactcatgttcattaagacttatctcatggactttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagctt 21603742  T
Q  220 cctcaatagcagtcacctt 238  Q
    ||||||||||||| |||||    
T  21603741 cctcaatagcagtaacctt 21603723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 28 - 229
Target Start/End: Original strand, 17014866 - 17015077
Alignment:
Q  28 taagtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatgg 123  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    |||||||||||||||||||||||||| |||| |||| |    
T  17014866 taagtaggatcttcatcagaatcttcatcaggtgattcctcttcagattcaacaactttaagagcttttgatgacttccctttagatgatagagcaatag 17014965  T
Q  124 atttactattcttagaaggttc------attaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagt 217  Q
    ||||||| ||| ||||||||||      ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17014966 atttactcttcctagaaggttcatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagc 17015065  T
Q  218 ttcctcaatagc 229  Q
    ||||||||||||    
T  17015066 ttcctcaatagc 17015077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 17288001 - 17287786
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    |||||||||||| || | |||| ||||||||||||||| ||||||||||||    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  17288001 gatcttcatcaggatcttcatcgggtgattcttcttcatattcaacaactttaagagcttttgatgacttcccttttgatggtagagcaatggatttact 17287902  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     || |||||||||||||      ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17287901 ctttttagaaggttcatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctca 17287802  T
Q  225 atagcagtcacctttg 240  Q
    ||||||||||||||||    
T  17287801 atagcagtcacctttg 17287786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 28 - 229
Target Start/End: Complemental strand, 17542335 - 17542124
Alignment:
Q  28 taagtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatgg 123  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    |||||||||||||||||||||||||| |||| |||| |    
T  17542335 taagtaggatcttcatcagaatcttcatcaggtgattcctcttcagattcaacaactttaagagcttttgatgacttccctttagatgatagagcaatag 17542236  T
Q  124 atttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagt 217  Q
    ||||||| ||| ||||||||||||      ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17542235 atttactcttcctagaaggttcatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagc 17542136  T
Q  218 ttcctcaatagc 229  Q
    ||||||||||||    
T  17542135 ttcctcaatagc 17542124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 20257408 - 20257189
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||| |||||||||||||||| | |||| |||    
T  20257408 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagtttttgatgaattccctttagatggtatatcaatagat 20257309  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||  ||      ||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20257308 ttactcttcttaccagactcatgttcattaagacttatctcatgaacttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 20257209  T
Q  220 cctcaatagcagtcaccttt 239  Q
    ||||||||||||||||||||    
T  20257208 cctcaatagcagtcaccttt 20257189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 25164577 - 25164797
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||| |||    
T  25164577 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagatcaatagat 25164676  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| |  |||  ||      ||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  25164677 ttactctctttaacaggttcatgttcattaagacttatttcatgaactttgagagagctgacaagatcttcagcacttaaaatgtttaaatctttagttt 25164776  T
Q  220 cctcaatagcagtcacctttg 240  Q
     |||||||||||| |||||||    
T  25164777 tctcaatagcagtaacctttg 25164797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 19940404 - 19940624
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||| ||||||||| ||||||||    
T  19940404 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattccacaactttaagagcttttgatgacttcccttttgatggtagagcaatggat 19940503  T
Q  126 ttactattcttag------aaggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    || || |||||||       | ||||||||||||| ||| ||| ||||||||||  |||||||||||||||||||||||||||||| |||||||||| ||    
T  19940504 ttgcttttcttagtcgactcatgttcattaagactaatctcatgaactttgagaacgctgacaagatcttcaacacttaaagtgttcaaatctttagctt 19940603  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||| ||||||||||||    
T  19940604 cctcaatatcagtcacctttg 19940624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 22672095 - 22672315
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||| ||||| |    ||||||||||||||| ||| | ||||||||| ||||||||    
T  22672095 agtaggatcttcatcaaaatccccatcaggtgattcttcttcagattccacaacctttaaagcttttgatgactttcctcttgatggtagagcaatggat 22672194  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    || || ||||| ||||      ||||||||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  22672195 ttgcttttcttggaagattcatgttcattaatacttatctcatgaactttgagagagctgacaagatcctcaacacttaaagtgtttaaatctttagctt 22672294  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  22672295 cctcaatagcagtcacctttg 22672315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 240
Target Start/End: Complemental strand, 18152836 - 18152638
Alignment:
Q  52 ccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------ 141  Q
    |||||||||||||||||||||||||| ||||| |    ||||||||||||||| ||| | ||||||||| |||||||||| || ||||| ||||          
T  18152836 ccatcaggtgattcttcttcagattccacaacctttaaagcttttgatgactttcctcttgatggtagagcaatggatttgcttttcttggaagattcat 18152737  T
Q  142 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    ||||||||||||||||| ||| || |||||||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18152736 gttcattaagacttatctcatgaaatttgagagagctcaccagatcctcaacacttagagtgtttaaatctttagtttcctcaatagcagtcacctttg 18152638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 20260671 - 20260483
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    |||||| |||||||||||||||||||||||| |||| | |    
T  20260671 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaaaaactttaagagctttagatgacttccctttagatggtagagcaataggt 20260572  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaa 208  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| ||| |||||| || |||||||||||||||||||||||||| ||||    
T  20260571 ttactcttcttagcaggttcatgttcattaagacttatctcatgaacgttgagatagttgacaagatcttcaacacttaaagtgcttaa 20260483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 21047301 - 21047113
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    |||||| |||||||||||||||||||||||| |||| | |    
T  21047301 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaaaaactttaagagctttagatgacttccctttagatggtagagcaataggt 21047202  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaa 208  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| ||| |||||| || |||||||||||||||||||||||||| ||||    
T  21047201 ttactcttcttagcaggttcatgttcattaagacttatctcatgaacgttgagatagttgacaagatcttcaacacttaaagtgcttaa 21047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 19941537 - 19941755
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||| | |||||||||||| ||||||||| ||| || |||||    || |||||||||||||||||| ||||||||| |||| |||    
T  19941537 agtaggatcttcatcagagtctccatcaggtgactcttcttcaaatttaataactttaagagattttgatgacttcccttttgatggtagagcaatagat 19941636  T
Q  126 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| || |||| | |      |||||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  19941637 ttactcttgttagcatgctcatgttcatttagacttatctcatgaaccttgaaagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 19941736  T
Q  220 cctcaatagcagtcacctt 238  Q
    ||||||||| ||| |||||    
T  19941737 cctcaatagtagtaacctt 19941755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 22463180 - 22463084
Alignment:
Q  142 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 238  Q
    ||||||| || |||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||    
T  22463180 gttcatttaggcttatctcatgaaccttgagagagctgacaagatcttcaacacttaaagagtttaaatttttagcttcctcaatagcagtaacctt 22463084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 13690262 - 13690113
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||    
T  13690262 ttttgaggtctttcctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaaca 13690163  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  13690162 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 13690113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 19233959 - 19234108
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||||||||| ||||||||||||| | |||||||| |||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  19233959 ttttgatgactttcctttagatggtaaagcaatggatctactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaaca 19234058  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  19234059 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 19234108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 29085505 - 29085721
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  29085505 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttgtaggctttggaagattttgaagtctttcctttagatggtaaagcaat 29085604  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||    
T  29085605 ggatttactcttcttagaggtttcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtatttagatcctta 29085704  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  29085705 gcttcctcaatagcagt 29085721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 232
Target Start/End: Original strand, 19427505 - 19427652
Alignment:
Q  91 ttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaag 184  Q
    |||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||||    
T  19427505 ttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaacaag 19427604  T
Q  185 atcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  19427605 atcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 19427652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 3350245 - 3350178
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  3350245 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3350178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 9366957 - 9367024
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9366957 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9367024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 15782321 - 15782254
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  15782321 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 15782254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 26119573 - 26119640
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  26119573 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26119640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 30316335 - 30316268
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  30316335 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30316268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 32079306 - 32079239
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  32079306 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32079239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 36087185 - 36087252
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36087185 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36087252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 36302189 - 36302256
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36302189 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36302256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 44490377 - 44490444
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  44490377 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 44490444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 238
Target Start/End: Original strand, 21297246 - 21297459
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    |||||| |||||||| |||||| |||||||||||||||||||||  | | | |    |||| |||||||| ||||||||||||||| |||| |||||| |    
T  21297246 gatcttgatcagaatctccatctggtgattcttcttcagattcactagccttgtatgctttagatgactttcctttagatggtagagcaatagatttatt 21297345  T
Q  131 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||| | || |      | ||||| || || ||  ||| ||| ||||| || || ||||||||||||||||| |||||||||| ||| |||| |||||||    
T  21297346 cttccttgaggactcatgctcattcaggctcatttcatgaaccttgagggaactaacaagatcttcaacactcaaagtgtttagatccttagcttcctca 21297445  T
Q  225 atagcagtcacctt 238  Q
    || |||||||||||    
T  21297446 atggcagtcacctt 21297459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 16745667 - 16745731
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  16745667 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 16745731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 250922 - 250965
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  250922 gatcttcatcagaatctccatcaggtgattcttcttcagattca 250965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 251071 - 251138
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  251071 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 251138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 814023 - 814066
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  814023 gatcttcatcagaatctccatcaggtgattcttcttcagattca 814066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 814172 - 814239
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  814172 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 814239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 3350394 - 3350351
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  3350394 gatcttcatcagaatctccatcaggtgattcttcttcagattca 3350351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 3842052 - 3842259
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  3842052 gatcttcatcagaatctccatctggtgactcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 3842151  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  3842152 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 3842251  T
Q  225 atagcagt 232  Q
    || |||||    
T  3842252 atggcagt 3842259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 9366808 - 9366851
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9366808 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9366851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 13690329 - 13690286
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13690329 gatcttcatcagaatctccatcaggtgattcttcttcagattca 13690286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 15782470 - 15782427
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15782470 gatcttcatcagaatctccatcaggtgattcttcttcagattca 15782427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 16745515 - 16745558
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16745515 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16745558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 19137794 - 19137837
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19137794 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19137837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 19137943 - 19138010
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||||| || |||| ||| |||| |||||||||||||||    
T  19137943 actttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 19138010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 19233892 - 19233935
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19233892 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19233935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 19427436 - 19427479
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19427436 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19427479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 26119424 - 26119467
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26119424 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26119467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 29075254 - 29075297
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  29075254 gatcttcatcagaatctccatcaggtgattcttcttcagattca 29075297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 29075403 - 29075470
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||| |||| |||| ||| |||| |||||||||||||||    
T  29075403 actttgagtgagctaacaagatcttcaacacttcaagtatttagatccttagcttcctcaatagcagt 29075470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 30316484 - 30316441
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  30316484 gatcttcatcagaatctccatcaggtgattcttcttcagattca 30316441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 32079455 - 32079412
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  32079455 gatcttcatcagaatctccatcaggtgattcttcttcagattca 32079412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 36087036 - 36087079
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  36087036 gatcttcatcagaatctccatcaggtgattcttcttcagattca 36087079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 44490228 - 44490271
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  44490228 gatcttcatcagaatctccatcaggtgattcttcttcagattca 44490271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 23791755 - 23791798
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  23791755 gatcttcatcagaatctccatctggtgattcttcttcagattca 23791798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 36302040 - 36302083
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||    
T  36302040 gatcttcatcagaatctccatcaggtgattcttgttcagattca 36302083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 23791898 - 23791956
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaat 226  Q
    ||||| || ||||||||||| |||||||| |||||||||| ||| |||| |||||||||    
T  23791898 ttgagggaactgacaagatcctcaacactcaaagtgtttagatccttagcttcctcaat 23791956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 22149212 - 22149148
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||| || ||||||| ||| |||| |||| |||| |||||    
T  22149212 ttgagggaactgacaagatcttcaacactcaaggtgtttagatccttagcttccacaatggcagt 22149148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 7484 - 7264
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||||||    
T  7484 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatggat 7385  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||  ||||||      ||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||    
T  7384 ttactctttctagaaggttcatgttcattaagacttatctcatgaagtttgagagagctgacaagattttcaacacttaaagtgtttaaatatttagctt 7285  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  7284 cctcaatagcagtcacctttg 7264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 2559507 - 2559727
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    || |||||||||||||||||| ||||||||| ||||| ||    
T  2559507 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagtttttgatgacttcccttttgatggtagagcaatgaat 2559606  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||||||      ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||    
T  2559607 ttactcttcttagaaggttcatgttcattaagacttatctcatgaactttgagagagttgacaagatcttcaacacttaaagtgtttaaatcattagctt 2559706  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  2559707 cctcaatagcagtcacctttg 2559727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 18123499 - 18123279
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||    ||||||||||||||||||||| ||||||||| |||| |||    
T  18123499 agtaggatcttcatcagaatctccatcagatgattcttcttcagattcaataactttaagagcttttgatgacttcccttttgatggtagagcaatagat 18123400  T
Q  126 ttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||||||||||||      ||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||    
T  18123399 ttactcttcttagaaggttcatgttcattaagacttatctcatgaactttgagagagttaacaagatcttcaacacttaaagtgtttaaatctttagctt 18123300  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  18123299 cctcaatagcagtcacctttg 18123279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 11188308 - 11188528
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||| ||||||| | ||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||| ||    
T  11188308 agtaggatcttcttcagaatcttcatcatgtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatgaat 11188407  T
Q  126 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| |||||||||||      |||||||| ||||||| |||||||||||||||||||  |||||||||||||| || |||||||||||||||||| ||    
T  11188408 ttactcttcttagaaggttcatattcattaaaacttatctcataaactttgagagagctatcaagatcttcaacatttgaagtgtttaaatctttagctt 11188507  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  11188508 cctcaatagcagtcacctttg 11188528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 17245033 - 17244813
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||    || |||||||||||||||||||||||||||||||||  ||    
T  17245033 agtaggatcttcatcagaatctccattaggtgattcttctttagattcaacaactttaagagtttttgatgacttccctttagatggtagaacaataaat 17244934  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| |||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  17244933 ttactcttcttagcaggctcatgttcattaagacttatctcatgaacttttagagagcttacaagatcttcaacacgtaaagtgtttaaatctttagctt 17244834  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||| |||| |||||||    
T  17244833 cctcaataacagtaacctttg 17244813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 14908518 - 14908303
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||||||  |||   |||||||| ||||||||||||||||||||| |||| ||||    
T  14908518 agtaggatcttcatctgaatctccatcaggtgaatcttcttcagattcaaca--ttaagagcttttgaagacttccctttagatggtagagcaattgatt 14908421  T
Q  127 tactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 220  Q
    |||| ||||||| ||      ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  14908420 tactcttcttagcagaatcatgttcatttagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgttaaaatctttagcttc 14908321  T
Q  221 ctcaatagcagtcacctt 238  Q
    |||||||||||| |||||    
T  14908320 ctcaatagcagtaacctt 14908303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 34 - 238
Target Start/End: Original strand, 16029327 - 16029541
Alignment:
Q  34 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta----gcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| |||||     |||||||||||||||||||||||||||||| ||||||||||||    
T  16029327 ggatcttcatcagaatctccatcaggtgactcttcttcagattcaataactttaagcgcttttgatgacttccctttagatggtagagcaatggatttac 16029426  T
Q  130 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 223  Q
    | ||||||| ||      ||||||| ||||||| | ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  16029427 tcttcttagcaggttcatgttcatttagacttacctcatgaatcttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcatc 16029526  T
Q  224 aatagcagtcacctt 238  Q
    ||||||||| |||||    
T  16029527 aatagcagtaacctt 16029541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 19886897 - 19886712
Alignment:
Q  61 gattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaa 150  Q
    |||||||||| ||||||||||||||    ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||| |       |||||||||    
T  19886897 gattcttcttaagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaat--atttactcttcttagcatactcatgttcattaa 19886800  T
Q  151 gacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 238  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  19886799 gacttatctcatgaactttgagagagctgacaatatcttcaacacttgaagtgtttaaatctctaggttcctcaatagcagtaacctt 19886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 5211122 - 5211210
Alignment:
Q  152 acttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5211122 acttatctcatgaactttgagagagctgacaagatcctcagcacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttg 5211210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 53058433 - 53058347
Alignment:
Q  154 ttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||    
T  53058433 ttatctcatgaactttgagagagctgacaagattttcaacactcaaagtttttaaatctttagcttcctcaatagcagttacctttg 53058347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 14079103 - 14078951
Alignment:
Q  86 agcttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctg 179  Q
    |||||||||  |||| ||||||||||||||| |||| |||||| | ||||||| ||      | ||||||||||| |||  || ||| |||||||||||     
T  14079103 agcttttgagaactttcctttagatggtagagcaatagatttagtcttcttagcagaatcatgctcattaagactaatcttatgaaccttgagagagctc 14079004  T
Q  180 acaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  14079003 ataagatcttcaacacttaaagtgtttaaatctttagcttcctcaataacagt 14078951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 9382388 - 9382172
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca--------acaa-ctt----agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||        | || |||    || ||| || ||||||||||||||||||||| ||||    
T  9382388 gatcttcatcagaatctccatcaggtgattcttcttcagattcactggccttataagctttagaagatttggaggacttccctttagatggtagagcaat 9382289  T
Q  122 ggatttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
     |||||||| ||||||||      | | ||||| ||||| ||  |||  ||||||||  | ||||||||||||||||||||||||||||||| ||| |||    
T  9382288 agatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgaggaaactgacaagatcttcaacacttaaagtgtttagatcctta 9382189  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  9382188 gcttcctcaatagcagt 9382172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 232
Target Start/End: Complemental strand, 11207745 - 11207603
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| |||||||||||||||||||| |||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  11207745 gactttcctttagatggtagaacaatagatttactcttcttagaggactcatgctcattcagactcatttcatgcactttgagggaactgacaagatctt 11207646  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||||||||| ||| |||| |||||||||||||||    
T  11207645 caacactcaaagtgtttagatccttagcttcctcaatagcagt 11207603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 17016297 - 17016507
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| ||||    
T  17016297 gatcttcatcagaatctccatctggtgaatcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctact 17016396  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || | |||||      | ||||| ||  ||| |||| |||| || ||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  17016397 cttctttgaggattcatgctcattcagactcatttcatgaactctgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctca 17016496  T
Q  225 atagcagtcac 235  Q
    || ||||||||    
T  17016497 atggcagtcac 17016507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 9983612 - 9983396
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  9983612 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttataggctttagaagattttgaagtctttcctttagatggtaaagcaat 9983513  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| ||| |||    
T  9983512 ggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcatta 9983413  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  9983412 gcttcctcaatagcagt 9983396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 5211048 - 5211103
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt 85  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  5211048 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattccacaactt 5211103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 6183541 - 6183474
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  6183541 actttgagtgagctaacaagatcttcaacacttaaagtatttaaatccttagcttcctcaatagcagt 6183474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 10628523 - 10628456
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  10628523 actttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 10628456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 13374243 - 13374176
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  13374243 actttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 13374176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 13384837 - 13384770
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  13384837 actttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 13384770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 16397595 - 16397528
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  16397595 actttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 16397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 11274042 - 11273893
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||    
T  11274042 ttttgaggtctttcctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaaca 11273943  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  11273942 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11273893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 12239275 - 12239126
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||| ||||||||  |||| |||    
T  12239275 ttttgaagtctttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatatactttgagtaagctaaca 12239176  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  12239175 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 12239126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 12288704 - 12288488
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  12288704 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttataggctttagaagattttgaagtctttcctttagatggtaaagcaat 12288605  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||||||| ||||||||||||||||||| ||| |||    
T  12288604 ggatttactcttcttagaggattcatgctcgtttaaactcatttcatgcactttgagtgagctaacaagatcctcaacacttaaagtgtttagatcctta 12288505  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  12288504 gcttcctcaatagcagt 12288488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 28315882 - 28315746
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  28315882 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 28315783  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  28315782 ttaaagtatttagatccttagcttcctcaatagcagt 28315746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 38203845 - 38203981
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  38203845 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 38203944  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  38203945 ttaaagtatttagatccttagcttcctcaatagcagt 38203981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 4752981 - 4753048
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  4752981 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4753048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 5538596 - 5538529
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5538596 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5538529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 5581208 - 5581141
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5581208 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5581141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 5867271 - 5867204
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5867271 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5867204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 6491921 - 6491854
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||| ||||||||||||||||||| ||| |||| |||||||||||||||    
T  6491921 actttgagtgagctaacaagatcctcaacacttaaagtgtttagatccttagcttcctcaatagcagt 6491854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 7796196 - 7796129
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||    
T  7796196 actttgagtgaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 7796129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 232
Target Start/End: Complemental strand, 8997601 - 8997459
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||| | |||||||| | |||||      ||||||| ||  |||  || ||||| || |||||||||||||    
T  8997601 gactttcctttagatggtagagcaatagatttattcttcttagaggattcatgctcattaagactcatttcatgtaccttgagggaactgacaagatctt 8997502  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||    
T  8997501 caacacttaaagtgtttagatccttagcttcctcaatggcagt 8997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 14474883 - 14474950
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  14474883 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 16392623 - 16392556
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  16392623 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16392556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 19787684 - 19787751
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  19787684 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 19787751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 23766556 - 23766623
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  23766556 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23766623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 24385093 - 24385026
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24385093 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24385026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 24669132 - 24669199
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24669132 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24669199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 29462793 - 29462726
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  29462793 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 29462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 29935278 - 29935071
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  29935278 gatcttcatcaaaatctccatcaggtgattcttcttcagattcattggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 29935179  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  29935178 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 29935079  T
Q  225 atagcagt 232  Q
    || |||||    
T  29935078 atggcagt 29935071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 29984432 - 29984225
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  29984432 gatcttcatcaaaatctccatcaggtgattcttcttcagattcattggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 29984333  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  29984332 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 29984233  T
Q  225 atagcagt 232  Q
    || |||||    
T  29984232 atggcagt 29984225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 39381346 - 39381413
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  39381346 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39381413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 41692911 - 41692978
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  41692911 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 41692978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 8783856 - 8783992
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  8783856 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 8783955  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  8783956 ttaaagtatttagatccttagcttcctcaatggcagt 8783992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 12754347 - 12754290
Alignment:
Q  178 tgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  12754347 tgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcac 12754290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 1785649 - 1785585
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  1785649 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 1785585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 4432425 - 4432489
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  4432425 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 4432489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 14312984 - 14312920
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||    
T  14312984 ttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 14312920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 505745 - 505678
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  505745 actttaagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 505678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 505894 - 505851
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  505894 gatcttcatcagaatctccatcaggtgattcttcttcagattca 505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 4432273 - 4432316
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4432273 gatcttcatcagaatctccatcaggtgattcttcttcagattca 4432316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 4752832 - 4752875
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4752832 gatcttcatcagaatctccatcaggtgattcttcttcagattca 4752875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 5519381 - 5519424
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5519381 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 5519530 - 5519597
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  5519530 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 5519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 5538745 - 5538702
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5538745 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5538702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 5581357 - 5581314
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5581357 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5581314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 5867420 - 5867377
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5867420 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5867377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 6183690 - 6183647
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  6183690 gatcttcatcagaatctccatcaggtgattcttcttcagattca 6183647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 8783776 - 8783819
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8783776 gatcttcatcagaatctccatcaggtgattcttcttcagattca 8783819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 10628672 - 10628629
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10628672 gatcttcatcagaatctccatcaggtgattcttcttcagattca 10628629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 11274109 - 11274066
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11274109 gatcttcatcagaatctccatcaggtgattcttcttcagattca 11274066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 13130783 - 13130826
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13130783 gatcttcatcagaatctccatcaggtgattcttcttcagattca 13130826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 13130932 - 13130999
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| ||||| |||||||||    
T  13130932 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttccttaatagcagt 13130999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 232
Target Start/End: Complemental strand, 13263323 - 13263181
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| ||  ||||||||||||    
T  13263323 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgtaccttgagggatttgacaagatctt 13263224  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||    
T  13263223 caacacttaaagtgtttagatccttagcttcctcaatggcagt 13263181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 13374392 - 13374349
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13374392 gatcttcatcagaatctccatcaggtgattcttcttcagattca 13374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 13384986 - 13384943
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13384986 gatcttcatcagaatctccatcaggtgattcttcttcagattca 13384943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 14474734 - 14474777
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14474734 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14474777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 15847571 - 15847626
Alignment:
Q  180 acaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  15847571 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcac 15847626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 16306701 - 16306630
Alignment:
Q  167 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 238  Q
    |||||||||||||| ||||||||||||||||| |||  ||| ||| |||| |||||||||||||||| ||||    
T  16306701 tttgagagagctgataagatcttcaacacttatagtacttagatccttagcttcctcaatagcagtctcctt 16306630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 16392772 - 16392729
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16392772 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16392729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 16397744 - 16397701
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16397744 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16397701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 19787535 - 19787578
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19787535 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19787578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 20674772 - 20674705
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| || || ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  20674772 actttgagtgaactaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 20674705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 20674921 - 20674878
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20674921 gatcttcatcagaatctccatcaggtgattcttcttcagattca 20674878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 24385242 - 24385199
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24385242 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24385199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 24668983 - 24669026
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24668983 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24669026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 37875574 - 37875617
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  37875574 gatcttcatcagaatctccatcaggtgattcttcttcagattca 37875617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 37884092 - 37884135
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  37884092 gatcttcatcagaatctccatcaggtgattcttcttcagattca 37884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 38203765 - 38203808
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  38203765 gatcttcatcagaatctccatcaggtgattcttcttcagattca 38203808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 39381197 - 39381240
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  39381197 gatcttcatcagaatctccatcaggtgattcttcttcagattca 39381240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 41692762 - 41692805
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  41692762 gatcttcatcagaatctccatcaggtgattcttcttcagattca 41692805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 37875724 - 37875790
Alignment:
Q  166 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| ||||||||| |||||    
T  37875724 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 37875790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 37884242 - 37884308
Alignment:
Q  166 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| ||||||||| |||||    
T  37884242 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 37884308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 7796345 - 7796302
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  7796345 gatcttcatcagattctccatcaggtgattcttcttcagattca 7796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 8997675 - 8997632
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  8997675 gatcttcatcagaatctccatctggtgattcttcttcagattca 8997632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 11207819 - 11207776
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  11207819 gatcttcatcagaatcttcatcaggtgattcttcttcagattca 11207776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 12239342 - 12239299
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||    
T  12239342 gatcttcatcagaatctccatcaggtgattcatcttcagattca 12239299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 13263397 - 13263354
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  13263397 gatcttcatcataatctccatcaggtgattcttcttcagattca 13263354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 23766407 - 23766450
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  23766407 gatcttcattagaatctccatcaggtgattcttcttcagattca 23766450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 28315962 - 28315919
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  28315962 gatcttcatcagaatctccatcaggtgattcttctacagattca 28315919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 1062800 - 1062864
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||| || ||||||| ||| |||| ||||||||| |||||    
T  1062800 ttgagggaactgacaagatcttcaacactcaaggtgtttagatccttagcttcctcaatggcagt 1062864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 6492070 - 6492027
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||    
T  6492070 gatcttcgtcagactctccatcaggtgattcttcttcagattca 6492027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 14313136 - 14313093
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||    
T  14313136 gatcttcatcagaatctccatcttgtgattcttcttcagattca 14313093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 15847431 - 15847474
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||| || |||||||||||||||||||||    
T  15847431 gatcttcatcagaatctccgtctggtgattcttcttcagattca 15847474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 15652681 - 15652623
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaat 226  Q
    ||||| || |||| ||||||||||||||| |||||||||| ||| |||| |||||||||    
T  15652681 ttgagggaactgataagatcttcaacactcaaagtgtttagatccttagcttcctcaat 15652623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 5e-71; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 31 - 240
Target Start/End: Complemental strand, 14906123 - 14905904
Alignment:
Q  31 gtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||||||||    
T  14906123 gtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaacagcttttgatgacttccctttagatggtagagcaatggatt 14906024  T
Q  127 tactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 220  Q
    |||| ||| ||||||      ||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||    
T  14906023 tactcttcctagaaggttcatgttcattaagacttatctcatgaactttgagagagctgacaagaacttcaacacttaaagtgttcaaatctttaccttc 14905924  T
Q  221 ctcaatagcagtcacctttg 240  Q
    | ||||||||||||||||||    
T  14905923 cgcaatagcagtcacctttg 14905904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 16852220 - 16852440
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||||||||||| ||||||||    
T  16852220 agtaggatcctcatcagaatctccatcaggtgattcttcttcagattccacaactttgagagcttttgatgacttccctttagatggtagagcaatggat 16852319  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    || || |||||||| |      ||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  16852320 ttgcttttcttagatgactcatgttcattaagactaatctcatgaacttttagagagctgacaagatcttcaacacttaaagtgttcaaatctttagctt 16852419  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  16852420 cctcaatagcagtcacctttg 16852440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 17245882 - 17246102
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    |  ||||||||||||||||||  |||||||| ||||||||    
T  17245882 agtaggatcttcatcagaatctccatcatgtgattcttcttcagattcaacaactttaagaaattttgatgacttccctttttatggtagagcaatggat 17245981  T
Q  126 ttactattcttagaaggttca------ttaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| || || |||||||||      |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||    
T  17245982 ttactctttttggaaggttcatattcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtatttagatccttagctt 17246081  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  17246082 cctcaatagcagtcacctttg 17246102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 237
Target Start/End: Complemental strand, 10662973 - 10662770
Alignment:
Q  44 cagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttaga 139  Q
    |||||| ||||||| |||| |||||||||||||||| |||||    |||||| |||||||| ||||||||||| ||  |||| |||||| | ||||| ||    
T  10662973 cagaatctccatcatgtgactcttcttcagattcaataactttaagagctttagatgactttcctttagatgggagcgcaatagatttattcttctttga 10662874  T
Q  140 ag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtc 233  Q
    ||      | ||||| || || ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||     
T  10662873 agactcatgctcatttaggctcatttcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctccatagcagta 10662774  T
Q  234 acct 237  Q
    ||||    
T  10662773 acct 10662770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 237
Target Start/End: Complemental strand, 10877118 - 10876915
Alignment:
Q  44 cagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttaga 139  Q
    |||||| ||||||| |||| |||||||||||||||| |||||    |||||| |||||||| ||||||||||| ||  |||| |||||| | ||||| ||    
T  10877118 cagaatctccatcatgtgactcttcttcagattcaataactttaagagctttagatgactttcctttagatgggagcgcaatagatttattcttctttga 10877019  T
Q  140 ag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtc 233  Q
    ||      | ||||| || || ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||     
T  10877018 agactcatgctcatttaggctcatttcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctccatagcagta 10876919  T
Q  234 acct 237  Q
    ||||    
T  10876918 acct 10876915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 18065102 - 18065318
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  18065102 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttgtaggcctttgaagattttgaagtctttcctttagatggtaaagcaat 18065201  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| ||| |||    
T  18065202 ggatttactcttcttagaggattcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcctta 18065301  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  18065302 gcttcctcaatagcagt 18065318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 16315928 - 16316070
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  16315928 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgagggaactgacaagatctt 16316027  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||||||||||||| |||| |||||||||||||||    
T  16316028 caacactcaaagtgtttaaatccttagcttcctcaatagcagt 16316070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 5021263 - 5021479
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  5021263 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttataggctttagaagattttgaagtctttcctttagatggtaaagcaat 5021362  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| ||| |||    
T  5021363 ggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcctta 5021462  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  5021463 gcttcctcaatagcagt 5021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 27665767 - 27665916
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||    
T  27665767 ttttgaggtctttcctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaaca 27665866  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27665867 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27665916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 4989523 - 4989307
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  4989523 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttataggctttagaagattttgaagtctttcctttagatggtaaagcaat 4989424  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| ||| |||    
T  4989423 ggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcctta 4989324  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||| ||||||||||    
T  4989323 gcttccccaatagcagt 4989307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 14837756 - 14837620
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||||| ||||||||||||| |||||||| |      | ||||| | ||| ||  |||  || ||||| || |||||||||||||||||||    
T  14837756 cctttagatggtagagcaatggatttactcttcttagaggactcatgctcatttaaactcatttcatgcaccttgagggaactgacaagatcttcaacac 14837657  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||| ||| |||| |||||||||||||||    
T  14837656 ttaaagtgtttagatccttagcttcctcaatagcagt 14837620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 24649538 - 24649674
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  24649538 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 24649637  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  24649638 ttaaagtatttagatccttagcttcctcaatagcagt 24649674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 459839 - 459906
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  459839 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 459906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 10742177 - 10742110
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  10742177 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10742110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 10955946 - 10955879
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  10955946 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10955879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 16265141 - 16265208
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  16265141 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16265208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 17927375 - 17927442
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  17927375 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17927442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 18131828 - 18131761
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  18131828 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 18131761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 18754069 - 18754002
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||| ||||||||||||||||||| ||| |||| |||||||||||||||    
T  18754069 actttgagtgagctaacaagatcctcaacacttaaagtgtttagatccttagcttcctcaatagcagt 18754002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 19945917 - 19945850
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  19945917 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 19945850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 22005693 - 22005760
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22005693 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22005760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 27175350 - 27175417
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27175350 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27175417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 30928072 - 30928005
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  30928072 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30928005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 36027567 - 36027634
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36027567 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36027634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 49516813 - 49516880
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  49516813 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 49516880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 55746900 - 55746764
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  55746900 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 55746801  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  55746800 ttaaagtatttagatccttagcttcctcaatggcagt 55746764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 15195501 - 15195437
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  15195501 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 15195437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 459690 - 459733
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  459690 gatcttcatcagaatctccatcaggtgattcttcttcagattca 459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 3380629 - 3380672
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  3380629 gatcttcatcagaatctccatcaggtgattcttcttcagattca 3380672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 10742326 - 10742283
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10742326 gatcttcatcagaatctccatcaggtgattcttcttcagattca 10742283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 10956095 - 10956052
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10956095 gatcttcatcagaatctccatcaggtgattcttcttcagattca 10956052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 14837836 - 14837793
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14837836 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 15198532 - 15198489
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15198532 gatcttcatcagaatctccatcaggtgattcttcttcagattca 15198489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 16264992 - 16265035
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16264992 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16265035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 16315854 - 16315897
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16315854 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16315897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 17927226 - 17927269
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17927226 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17927269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 18131977 - 18131934
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18131977 gatcttcatcagaatctccatcaggtgattcttcttcagattca 18131934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 18754218 - 18754175
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18754218 gatcttcatcagaatctccatcaggtgattcttcttcagattca 18754175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 19946066 - 19946023
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19946066 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19946023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 22005544 - 22005587
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22005544 gatcttcatcagaatctccatcaggtgattcttcttcagattca 22005587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 24649458 - 24649501
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24649458 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24649501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27175200 - 27175243
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27175200 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27175243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27665700 - 27665743
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27665700 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27665743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 27816525 - 27816458
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| | ||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27816525 actttgagtgagctaagaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27816458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 27816674 - 27816631
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27816674 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27816631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 30928221 - 30928178
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  30928221 gatcttcatcagaatctccatcaggtgattcttcttcagattca 30928178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 36027418 - 36027461
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  36027418 gatcttcatcagaatctccatcaggtgattcttcttcagattca 36027461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 40455939 - 40455872
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| || || |||||||||||||||||||| ||||||| ||| |||| |||||||||||||||    
T  40455939 actttgagtgaactaacaagatcttcaacacttaacgtgtttagatccttagcttcctcaatagcagt 40455872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 40456088 - 40456045
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  40456088 gatcttcatcagaatctccatcaggtgattcttcttcagattca 40456045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 49516664 - 49516707
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  49516664 gatcttcatcagaatctccatcaggtgattcttcttcagattca 49516707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 55746980 - 55746937
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  55746980 gatcttcatcagaatctccatcaggtgattcttcttcagattca 55746937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 3380790 - 3380845
Alignment:
Q  177 ctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||||| || ||||||| ||| |||| |||||||||||||||    
T  3380790 ctgacaagatcttcaacactcaaggtgtttagatccttagcttcctcaatagcagt 3380845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 14712542 - 14712499
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  14712542 gatcttcatcagaatctccatctggtgattcttcttcagattca 14712499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 14712399 - 14712335
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||| |||||||||||||||||||||| | ||| |||| ||||||||| |||||    
T  14712399 ttgagggaactgacatgatcttcaacacttaaagtgttaagatccttagcttcctcaatggcagt 14712335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 19945999 - 19945949
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttaga 139  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| ||||||||    
T  19945999 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttaga 19945949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 13680653 - 13680873
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||  |||||||    
T  13680653 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagtaatggat 13680752  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||| | ||| ||||||      |||||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  13680753 ttaatcttcctagaaggttcatgttcattaagacatatctcgtgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatatttagctt 13680852  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  13680853 cctcaatagcagtcacctttg 13680873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 30 - 236
Target Start/End: Original strand, 13878449 - 13878665
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||||||||||| ||||||||    
T  13878449 agtaggatcttcatcagaatctccatcaggtgattcttcttcaaattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatggat 13878548  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||||||      ||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||    
T  13878549 ttactcttcttagaaggttcatgttcattaagacttatctcatgaactttgagagagatgacaagttcttcaacacttaatgtgtttaaatctttagctt 13878648  T
Q  220 cctcaatagcagtcacc 236  Q
    ||||||||| |||||||    
T  13878649 cctcaatagtagtcacc 13878665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 14171970 - 14172190
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    | ||||||||||||||||||||||||||||| ||||||||    
T  14171970 agtaggatcttcatcagaatctccatcaggtgattcttcttcagactcaacaactttaagaacttttgatgacttccctttagatggtagagcaatggat 14172069  T
Q  126 ttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||||      | ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||    
T  14172070 ttactcttcttagacgattcatgttcattaagacttatctcatgaactttgagagagctgacaagatcctcaacacttaaagtgttaaaatctttagctt 14172169  T
Q  220 cctcaatagcagtcacctttg 240  Q
    ||||||||| |||||||||||    
T  14172170 cctcaatagtagtcacctttg 14172190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 35 - 239
Target Start/End: Complemental strand, 16547842 - 16547628
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  16547842 gatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcccttttgatggtagagcaatggatttact 16547743  T
Q  131 attcttagaaggtt------cattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     || || |||||||      |||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16547742 ctttttggaaggttcatgtccattaagacttagctcatgaactttaagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctca 16547643  T
Q  225 atagcagtcaccttt 239  Q
    |||||||||||||||    
T  16547642 atagcagtcaccttt 16547628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 35 - 239
Target Start/End: Original strand, 16617820 - 16618034
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  16617820 gatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcccttttgatggtagagcaatggatttact 16617919  T
Q  131 attcttagaaggtt------cattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     || || |||||||      |||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16617920 ctttttggaaggttcatgtccattaagacttagctcatgaactttaagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctca 16618019  T
Q  225 atagcagtcaccttt 239  Q
    |||||||||||||||    
T  16618020 atagcagtcaccttt 16618034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 13174064 - 13173846
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||||| ||||| |||| ||     
T  13174064 agtaggatcttcatcagaatctccatcaggtgattcttcttcaaattcaacaactttaagagcttttgatgacttccctttagattgtagagcaatagag 13173965  T
Q  126 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| |||      |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13173964 ttactcttcttagcaggctcatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 13173865  T
Q  220 cctcaatagcagtcacctt 238  Q
    |||||||| |||| |||||    
T  13173864 cctcaataacagtaacctt 13173846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 16311828 - 16311609
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||| |||| |||    
T  16311828 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgaattccctttagatggtagagcaatagat 16311729  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| ||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||    
T  16311728 ttactcttcttagtaggctcatgttcattaagacttatctcatgaactttgagagaattgac-agatcttcaacacttaaagtgtttaaatctttagctt 16311630  T
Q  220 cctcaatagcagtcacctttg 240  Q
    ||||||| ||||| |||||||    
T  16311629 cctcaatggcagtaacctttg 16311609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 46 - 238
Target Start/End: Complemental strand, 13028761 - 13028559
Alignment:
Q  46 gaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttagaag 141  Q
    |||| ||||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||  |||| |||||||| ||| ||| ||    
T  13028761 gaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagtgcaatagatttactcttcctagcag 13028662  T
Q  142 g------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    |      |||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  13028661 gctcatgttcattgagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcgatagcagtaac 13028562  T
Q  236 ctt 238  Q
    |||    
T  13028561 ctt 13028559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 16669998 - 16669765
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||| |||| |||    
T  16669998 agtaggatcttcatcagaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggcagagcaatagat 16669899  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataa---------------actttgagagagctgacaagatcttcaacacttaaagtgt 204  Q
    ||  | ||||||| ||      ||||||| ||||||||| |||||               || |||||||||||||||||||||||||||||||||||||    
T  16669898 ttgttcttcttagcaggctcatgttcatttagacttatctcataaaccttgagagagttgaccttgagagagctgacaagatcttcaacacttaaagtgt 16669799  T
Q  205 ttaaatctttagtttcctcaatagcagtcacctt 238  Q
    |||||||||||  |||||||||||| || |||||    
T  16669798 ttaaatctttaacttcctcaatagcggtaacctt 16669765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 17644366 - 17644133
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||| |||| |||    
T  17644366 agtaggatcttcatcagaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggcagagcaatagat 17644267  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataa---------------actttgagagagctgacaagatcttcaacacttaaagtgt 204  Q
    ||  | ||||||| ||      ||||||| ||||||||| |||||               || |||||||||||||||||||||||||||||||||||||    
T  17644266 ttgttcttcttagcaggctcatgttcatttagacttatctcataaaccttgagagagttgaccttgagagagctgacaagatcttcaacacttaaagtgt 17644167  T
Q  205 ttaaatctttagtttcctcaatagcagtcacctt 238  Q
    |||||||||||  |||||||||||| || |||||    
T  17644166 ttaaatctttaacttcctcaatagcggtaacctt 17644133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 4413695 - 4413597
Alignment:
Q  142 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    ||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  4413695 gttcattgagactaatctcatgaactttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctcaatagcagtcacctttg 4413597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 21212288 - 21212214
Alignment:
Q  164 aactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  21212288 aactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcatcaatagcagtaacctt 21212214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 9168750 - 9168892
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  9168750 gactttcctttagatggtagatcaatagatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgagggaactgacaagatctt 9168849  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||||||||||||| |||| |||||||||||||||    
T  9168850 caacactcaaagtgtttaaatccttagcttcctcaatagcagt 9168892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 6868971 - 6868822
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  6868971 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggtttcatgctcatttaaactcatttcatgcactttgagtgagctaaca 6868872  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  6868871 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 6868822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 13176291 - 13176082
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    | |    |||||| |||||||| ||||||||| ||||| |||| ||| ||||    
T  13176291 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtaagctttggatgactttcctttagattgtagagcaatagatctact 13176192  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || | |||||      | | ||| ||  ||| ||||||||| || ||||||||||||||||||||| ||||||||| ||| |||| |||||||    
T  13176191 cttctttgaggattcatgctcattcaaactcatttcatgaactttgagggaactgacaagatcttcaacactt-aagtgtttagatccttagcttcctca 13176093  T
Q  225 atagcagtcac 235  Q
    || ||||||||    
T  13176092 atggcagtcac 13176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 11014363 - 11014499
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  11014363 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 11014462  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  11014463 ttaaagtatttagatccttagcttcctcaatagcagt 11014499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 176134 - 176201
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  176134 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 176201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 458645 - 458578
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  458645 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 458578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 1996800 - 1996867
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  1996800 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 1996867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 2707272 - 2707205
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  2707272 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 2707205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 4221252 - 4221319
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  4221252 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4221319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 8626589 - 8626656
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  8626589 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 8626656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 9442507 - 9442574
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9442507 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9442574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 11003823 - 11003890
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  11003823 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11003890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 20988301 - 20988368
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  20988301 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 20988368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 22098385 - 22098452
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22098385 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22098452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 24743345 - 24743412
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24743345 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24743412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 26391753 - 26391686
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  26391753 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26391686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 40043763 - 40043696
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  40043763 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40043696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 42875092 - 42875159
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  42875092 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 42875159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 15879563 - 15879414
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  15879563 ttttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaaca 15879464  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||| |||||| ||| |||| |||||||||||||||    
T  15879463 agatcttcaacacttaaaatgtttagatccttagcttcctcaatagcagt 15879414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 8003794 - 8003658
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  8003794 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 8003695  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  8003694 ttaaagtatttagatccttagcttcctcaatggcagt 8003658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 9093562 - 9093698
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  9093562 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 9093661  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  9093662 ttaaagtatttagatccttagcttcctcaatggcagt 9093698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 175985 - 176028
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  175985 gatcttcatcagaatctccatcaggtgattcttcttcagattca 176028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 458794 - 458751
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  458794 gatcttcatcagaatctccatcaggtgattcttcttcagattca 458751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 1996651 - 1996694
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  1996651 gatcttcatcagaatctccatcaggtgattcttcttcagattca 1996694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 2707421 - 2707378
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  2707421 gatcttcatcagaatctccatcaggtgattcttcttcagattca 2707378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 4221103 - 4221146
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4221103 gatcttcatcagaatctccatcaggtgattcttcttcagattca 4221146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 6869038 - 6868995
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  6869038 gatcttcatcagaatctccatcaggtgattcttcttcagattca 6868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 8003874 - 8003831
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8003874 gatcttcatcagaatctccatcaggtgattcttcttcagattca 8003831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 8626440 - 8626483
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8626440 gatcttcatcagaatctccatcaggtgattcttcttcagattca 8626483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 9093482 - 9093525
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9093482 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9093525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 9168676 - 9168719
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9168676 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9168719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 9442358 - 9442401
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9442358 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9442401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 11003674 - 11003717
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11003674 gatcttcatcagaatctccatcaggtgattcttcttcagattca 11003717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 11014283 - 11014326
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11014283 gatcttcatcagaatctccatcaggtgattcttcttcagattca 11014326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 15879630 - 15879587
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15879630 gatcttcatcagaatctccatcaggtgattcttcttcagattca 15879587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 17951773 - 17951706
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| || ||||||||||||    
T  17951773 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagctttctcaatagcagt 17951706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 17951922 - 17951879
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17951922 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17951879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 18439699 - 18439906
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||  | | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  18439699 gatcttcattagaatctccatctggtgattcttcttcagattcactagccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 18439798  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||| ||||||||||||||| |||||||||| ||| |||| |||||||    
T  18439799 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgataagatcttcaacactcaaagtgtttagatccttagcttcctca 18439898  T
Q  225 atagcagt 232  Q
    || |||||    
T  18439899 atggcagt 18439906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 20988152 - 20988195
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20988152 gatcttcatcagaatctccatcaggtgattcttcttcagattca 20988195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 22098236 - 22098279
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22098236 gatcttcatcagaatctccatcaggtgattcttcttcagattca 22098279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 24743196 - 24743239
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24743196 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24743239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 26391902 - 26391859
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26391902 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26391859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 26654995 - 26654928
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  26654995 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 26654928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 26655144 - 26655101
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26655144 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26655101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 40043912 - 40043869
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  40043912 gatcttcatcagaatctccatcaggtgattcttcttcagattca 40043869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 42874943 - 42874986
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  42874943 gatcttcatcagaatctccatcaggtgattcttcttcagattca 42874986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 16106706 - 16106650
Alignment:
Q  182 aagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 238  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||| ||| |||||||    
T  16106706 aagatcttcaacacttagagtgtttaaatcattagcttcctcaattgcattcacctt 16106650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 4413826 - 4413779
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattc 77  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||    
T  4413826 agtaggatcttcatcagaatctccatcaagtaattcttcttcagattc 4413779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 16309426 - 16309336
Alignment:
Q  142 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| ||||  ||| ||| ||| ||||||||||| | |||||| |||||| ||| ||| |||||||| |||| |||||||||||||||    
T  16309426 gttcatttagaccaatctcatgaaccttgagagagcttataagatcctcaacagttagagtttttaaatccttagcttcctcaatagcagt 16309336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 7e-67; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 30 - 228
Target Start/End: Original strand, 26940711 - 26940919
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||| |||    
T  26940711 agtagggtcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaattgat 26940810  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  26940811 ttactcttcttagtaggctcctgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagctt 26940910  T
Q  220 cctcaatag 228  Q
    |||||||||    
T  26940911 cctcaatag 26940919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 34 - 238
Target Start/End: Original strand, 19450385 - 19450596
Alignment:
Q  34 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||| |||| |||||||||||||| ||||||||||| |||   |||   ||||||||||||||  |||||||||||||| |||| ||||||||    
T  19450385 ggatcttcatctgaatctccatcaggtgattgttcttcagatttaact--ttaagagcttttgatgacttttctttagatggtagagcaatagatttact 19450482  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     || |||| ||||||||      | ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  19450483 cttattagcaggttcatgttcatttagacttatctcatgaactttgagagggctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctga 19450582  T
Q  225 atagcagtcacctt 238  Q
    |||||||| |||||    
T  19450583 atagcagtaacctt 19450596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 34 - 238
Target Start/End: Original strand, 19448391 - 19448602
Alignment:
Q  34 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||| |||| |||||||||||||| ||||||||||| |||   |||   ||||||||||||||  |||||||||||||| |||| ||||||||    
T  19448391 ggatcttcatctgaatctccatcaggtgattgttcttcagatttaact--ttaagagcttttgatgacttttctttagatggtagagcaatagatttact 19448488  T
Q  131 attcttag-aag-----gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     || |||| |||     ||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  19448489 cttattagcaagttcatgttcatttagacttatctcatgaactttgagagggctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctga 19448588  T
Q  225 atagcagtcacctt 238  Q
    |||||||| |||||    
T  19448589 atagcagtaacctt 19448602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 228
Target Start/End: Original strand, 17926093 - 17926301
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||| ||||||||| |||||| |||||    ||||||  |||||||  ||||||||   | | |||| |||    
T  17926093 agtaggatcttcatcagaatctccatcaggtgactcttcttcatattcaataactttaagagctttatatgactttactttagatttcatagcaatagat 17926192  T
Q  126 ttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||| | ||||| |||| |||||      | ||||| ||  ||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||| | ||    
T  17926193 ttattcttctttgaagattcatgctcatttagactcatttcatgaactttgagagagctaacaagatctttaacacttaaagtgtttacatctttcgctt 17926292  T
Q  220 cctcaatag 228  Q
     ||||||||    
T  17926293 tctcaatag 17926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 14055119 - 14054904
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaac-tta---gcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    |||||||||||||||  ||||| |||||||||||||||||||||  | | |||   ||||| |||| ||| ||||||||||||||| |||||||||||||    
T  14055119 gatcttcatcagaatccccatctggtgattcttcttcagattcactagccttatatgctttagatggctttcctttagatggtagagcaatggatttact 14055020  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || | |||||      | || || |   ||| ||| |||||||| || ||||||||||||||||| || ||||||| ||| |||| |||||||    
T  14055019 cttctttgaggattcatgctcatttaggctcaattcatgaaccttgagagaacttacaagatcttcaacactcaacgtgtttagatccttagcttcctca 14054920  T
Q  225 atagcagtcacctttg 240  Q
    |||||||| |||||||    
T  14054919 atagcagttacctttg 14054904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 27502838 - 27502987
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  27502838 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaaca 27502937  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  27502938 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 27502987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 28253235 - 28253086
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  28253235 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaaca 28253136  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  28253135 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 28253086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 28331984 - 28331835
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  28331984 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaaca 28331885  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  28331884 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 28331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 27383204 - 27383420
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatga---------cttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | ||| |    ||||||| ||         ||| ||||||||||||| | ||||    
T  27383204 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttgtaggcttttgaggattttgaagtctttcctttagatggtaaagcaat 27383303  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| |||  ||    
T  27383304 ggatttactcttcttagaggattcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcccta 27383403  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  27383404 gcttcctcaatagcagt 27383420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 27473588 - 27473804
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatga---------cttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | ||| |    ||||||| ||         ||| ||||||||||||| | ||||    
T  27473588 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttgtaggcttttgaggattttgaagtctttcctttagatggtaaagcaat 27473687  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| |||  ||    
T  27473688 ggatttactcttcttagaggattcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcccta 27473787  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  27473788 gcttcctcaatagcagt 27473804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 9114078 - 9114011
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  9114078 actttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 9114011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 25804209 - 25804349
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||||||||  ||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  25804209 gactttcctttagatggtagaacaataaatttactcttcttagaggactcatgctcattcagactcatttcatgcactttgagggaactgacaagatctt 25804308  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagca 230  Q
    ||||||| |||||||||| ||| |||| |||||||||||||    
T  25804309 caacactcaaagtgtttagatccttagcttcctcaatagca 25804349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 26042813 - 26042878
Alignment:
Q  167 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  26042813 tttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 26042878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 17447360 - 17447272
Alignment:
Q  144 tcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||| ||| ||||||  |||||||| || | ||||||||||||||||| | |||||||||| |||| |||||||||||||||    
T  17447360 tcattaagactaatctcataaatcttgagagaactcataagatcttcaacacttagaatgtttaaatccttagcttcctcaatagcagt 17447272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 3670660 - 3670727
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  3670660 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3670727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 12718421 - 12718354
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  12718421 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12718354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 22307269 - 22307476
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  22307269 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttataagctttggaagactttcctttagatggtagagcaatagatctatt 22307368  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  22307369 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 22307468  T
Q  225 atagcagt 232  Q
    || |||||    
T  22307469 atggcagt 22307476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 25984693 - 25984760
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  25984693 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 25984760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 26034636 - 26034703
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  26034636 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 26874018 - 26874085
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  26874018 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26874085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 27350961 - 27351028
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27350961 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27351028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 27411701 - 27411768
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27411701 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27411768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 32302631 - 32302564
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  32302631 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32302564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 32963531 - 32963464
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  32963531 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32963464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 34808747 - 34808680
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  34808747 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttaggttcctcaatagcagt 34808680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 20031588 - 20031443
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  20031588 ttttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctaatttaaactcatttcatgcactttgagtgaactaaca 20031489  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatag 228  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||    
T  20031488 agatcttcaacacttaaagtgtttagatccttagcttcctcaatag 20031443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 18553908 - 18553972
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| |||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||||    
T  18553908 ttgagagaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 18553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 3670511 - 3670554
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  3670511 gatcttcatcagaatctccatcaggtgattcttcttcagattca 3670554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 12863998 - 12864041
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  12863998 gatcttcatcagaatctccatcaggtgattcttcttcagattca 12864041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 12864147 - 12864214
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||| ||||||||| |||| ||| |||| |||||||||||||||    
T  12864147 actttgagtgagctaacaagatcttcaaaacttaaagtatttagatccttagcttcctcaatagcagt 12864214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 13138088 - 13138005
Alignment:
Q  147 ttaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagca 230  Q
    |||||||| ||| ||| ||| |||||||| || | ||||||||||||| ||| ||||||||||||||||| ||| |||||||||    
T  13138088 ttaagactaatctcatgaaccttgagagaacttataagatcttcaacaattagagtgtttaaatctttagattcttcaatagca 13138005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 16958075 - 16958118
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16958075 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16958118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 17610319 - 17610112
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  17610319 gatcttcatcagaatctccatctggtgactcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 17610220  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  17610219 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 17610120  T
Q  225 atagcagt 232  Q
    || |||||    
T  17610119 atggcagt 17610112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 20031655 - 20031612
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20031655 gatcttcatcagaatctccatcaggtgattcttcttcagattca 20031612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 25984544 - 25984587
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  25984544 gatcttcatcagaatctccatcaggtgattcttcttcagattca 25984587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 26034487 - 26034530
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26034487 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26034530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 26042662 - 26042705
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26042662 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26042705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 26873869 - 26873912
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26873869 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26873912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27350812 - 27350855
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27350812 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27350855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27411552 - 27411595
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27411552 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27411595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 28253302 - 28253259
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  28253302 gatcttcatcagaatctccatcaggtgattcttcttcagattca 28253259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 28332051 - 28332008
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  28332051 gatcttcatcagaatctccatcaggtgattcttcttcagattca 28332008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 32302780 - 32302737
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  32302780 gatcttcatcagaatctccatcaggtgattcttcttcagattca 32302737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 32963680 - 32963637
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  32963680 gatcttcatcagaatctccatcaggtgattcttcttcagattca 32963637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 34808896 - 34808853
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34808896 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34808853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 16958225 - 16958291
Alignment:
Q  166 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| ||||||||| |||||    
T  16958225 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 16958291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 22385237 - 22385294
Alignment:
Q  178 tgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    ||||||||||||||||||| |||||||||| ||| |||| ||||||||| ||||||||    
T  22385237 tgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcac 22385294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 11204583 - 11204650
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    ||||| || |||||||||||||||||||| |||||||| | ||| |||| ||||||||| ||||||||    
T  11204583 ttgagggaactgacaagatcttcaacactcaaagtgttcagatccttagcttcctcaatggcagtcac 11204650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 12718570 - 12718531
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcaga 74  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12718570 gatcttcatcagaatctccatcaggtgattcttcttcaga 12718531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 17056529 - 17056572
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  17056529 gatcttcatcagaatctccatctggtgattcttcttcagattca 17056572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 25723461 - 25723418
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  25723461 gatcttcatcagaatctccatctggtgattcttcttcagattca 25723418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27502771 - 27502814
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  27502771 gatcttcatcagaatctcgatcaggtgattcttcttcagattca 27502814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 18553768 - 18553808
Alignment:
Q  37 tcttcatcagaatttccatcaggtgattcttcttcagattc 77  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  18553768 tcttcatcagaatctccatctggtgattcttcttcagattc 18553808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 9114227 - 9114184
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||    
T  9114227 gatcttcatcagaatctccatcagatgattcttcttaagattca 9114184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 11204439 - 11204482
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||    
T  11204439 gatcttcatcagaatctccatctggtgattcttcttcatattca 11204482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 22385084 - 22385127
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||| || |||||||||||||||||||||    
T  22385084 gatcttcatcagaatctccgtctggtgattcttcttcagattca 22385127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 25804135 - 25804178
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    |||||||| |||||| |||||||| |||||||||||||||||||    
T  25804135 gatcttcaacagaatctccatcagttgattcttcttcagattca 25804178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 19874216 - 19874258
Alignment:
Q  32 taggatcttcatcagaatttccatcaggtgattcttcttcaga 74  Q
    |||||||||||||||||| ||||||| |||| |||||||||||    
T  19874216 taggatcttcatcagaatctccatcaagtgactcttcttcaga 19874258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 17447477 - 17447440
Alignment:
Q  37 tcttcatcagaatttccatcaggtgattcttcttcaga 74  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  17447477 tcttcatcagaatctccatcaggtgactcttcttcaga 17447440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 17062840 - 17062904
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||  || ||||||| ||| |||| ||||||||| |||||    
T  17062840 ttgagggaactgacaagatcttcaacacacaaggtgtttagatccttagcttcctcaatggcagt 17062904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 93)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 26782732 - 26782952
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||||||    
T  26782732 agtatgatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatggat 26782831  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| ||      |||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26782832 ttactcttcttagcaggctccagttcattaagacttgtcttatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 26782931  T
Q  220 cctcaatagcagtcacctttg 240  Q
    ||  |||| ||||||||||||    
T  26782932 ccaaaataacagtcacctttg 26782952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 26763769 - 26763988
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||| ||||| ||| ||||| ||    
T  26763769 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattccacaactttaagagcttttgatgacttcccttttgatggaagagcaatgaat 26763868  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    | ||| ||||||||||      ||||||||||||||||| ||| ||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||    
T  26763869 t-acttttcttagaagattcatgttcattaagacttatctcatgaactttgagagagttgacaagatccttaacacttaaagtgtttaaatctttagctt 26763967  T
Q  220 cctcaatagcagtcacctttg 240  Q
    ||||||||||| |||||||||    
T  26763968 cctcaatagcaatcacctttg 26763988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 21200845 - 21200627
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||| ||||||| | ||| |||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||| |||| |||    
T  21200845 agtagggtcttcattataatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgaattccctttagatggtagagcaattgat 21200746  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||||||      ||||||| ||||||||| ||| |||||| |||||| |||||||||||| ||||||||||||||||| || ||||| ||    
T  21200745 ttactcttcttagaaggctcatgttcatttagacttatctcatgaactttaagagagttgacaagatctttaacacttaaagtgtttagatgtttagctt 21200646  T
Q  220 cctcaatagcagtcacctt 238  Q
    ||||||||||||| |||||    
T  21200645 cctcaatagcagtaacctt 21200627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 23394189 - 23394040
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgaca 182  Q
    |||||| ||||| ||||||||||||||| ||||||||||||| |||||||| |      | ||||| | ||| ||  |||  |||||||| || ||||||    
T  23394189 ttttgaagactttcctttagatggtagagcaatggatttactcttcttagaggactcatgctcatttaaactcatttcatgcactttgagggaactgaca 23394090  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  23394089 agatcttcaacacttaaagtgtttaaatccttagcttcctcaatagcagt 23394040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 23486917 - 23487127
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| |||||||||||||||||||||  | | |    |||||| |||||||| ||||||||||||||| |||| ||| || |    
T  23486917 gatcttcatcagaatctccatctggtgattcttcttcagattcactagccttgtaagctttagatgactttcctttagatggtagagcaatagatctatt 23487016  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || | |||||      | ||||  ||  ||| ||||||||  || ||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  23487017 cttctttgaggattcatgctcattcagacccatttcatgaactttgatggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctca 23487116  T
Q  225 atagcagtcac 235  Q
    || ||||||||    
T  23487117 atggcagtcac 23487127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 24981898 - 24982040
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  24981898 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgagggaactgacaagatctt 24981997  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||||||||||||| |||| |||||||||||||||    
T  24981998 caacactcaaagtgtttaaatccttagcttcctcaatagcagt 24982040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 238
Target Start/End: Complemental strand, 11209833 - 11209620
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaa-ctta---gcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||  |  |||    ||||| |||| ||| |||||| |||||||| |||| ||||||||    
T  11209833 gatcttcatcagaatctccatctggtgattcttctacagattcactagtcttgtatgctttagatggctttcctttatatggtagagcaatagatttact 11209734  T
Q  131 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || |      | ||||| || || ||  ||| ||| |||||||| |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  11209733 cttctttgaggacttatgctcatttaggctcatttcatgaaccttgagagaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 11209634  T
Q  225 atagcagtcacctt 238  Q
    || |||||||||||    
T  11209633 atggcagtcacctt 11209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 31420363 - 31420296
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  31420363 actttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 31420296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 232
Target Start/End: Complemental strand, 34053733 - 34053591
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  ||||||||||| |||||||||||||    
T  34053733 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgcactttgagagaactgacaagatctt 34053634  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| || ||||||| ||| |||| |||||||||||||||    
T  34053633 caacactcaaggtgtttagatccttagcttcctcaatagcagt 34053591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 39354276 - 39354127
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  39354276 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggtttcatgctcatttaaactcatttcatgcactttgagtgagctaaca 39354177  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  39354176 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39354127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 5299705 - 5299772
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5299705 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5299772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 6977504 - 6977437
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  6977504 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 6977437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 9337652 - 9337585
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9337652 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9337585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 14031740 - 14031673
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  14031740 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14031673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 14456175 - 14456242
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  14456175 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14456242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 14567216 - 14567283
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  14567216 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14567283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 15741667 - 15741600
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  15741667 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 15741600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 16002459 - 16002526
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  16002459 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16002526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 17608760 - 17608693
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  17608760 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17608693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 17720616 - 17720549
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  17720616 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17720549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 22148214 - 22148147
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22148214 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22148147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 22677814 - 22677747
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22677814 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22677747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 23297975 - 23297908
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  23297975 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23297908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 23363794 - 23363727
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  23363794 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23363727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 23698478 - 23698411
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  23698478 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23698411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 24568786 - 24568719
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24568786 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24568719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 27051400 - 27051467
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27051400 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 27461860 - 27461793
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27461860 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27461793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 30236589 - 30236656
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  30236589 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 31350232 - 31350165
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  31350232 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 31350165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 31835178 - 31835111
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  31835178 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 31835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 34773607 - 34773540
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  34773607 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 34773540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 35217201 - 35217134
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  35217201 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 35217134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 36591680 - 36591747
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36591680 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36591747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 36689396 - 36689329
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36689396 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36689329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 39500050 - 39500117
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  39500050 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39500117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 40392056 - 40391989
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  40392056 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 42044478 - 42044411
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  42044478 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 42044411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 37739061 - 37739197
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  37739061 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 37739160  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  37739161 ttaaagtatttagatccttagcttcctcaatggcagt 37739197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 17455879 - 17455943
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  17455879 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 17455943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 1120316 - 1120359
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  1120316 gatcttcatcagaatctccatcaggtgattcttcttcagattca 1120359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 1120465 - 1120532
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| | | |||| |||||||||||||||    
T  1120465 actttgagtgagctaacaagatcttcaacacttaaagtatttagacccttagcttcctcaatagcagt 1120532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 5299556 - 5299599
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5299556 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5299599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 6977653 - 6977610
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  6977653 gatcttcatcagaatctccatcaggtgattcttcttcagattca 6977610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 9337801 - 9337758
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9337801 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9337758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 14031889 - 14031846
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14031889 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14031846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 14456026 - 14456069
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14456026 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 14567067 - 14567110
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14567067 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14567110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 15741816 - 15741773
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15741816 gatcttcatcagaatctccatcaggtgattcttcttcagattca 15741773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 17455727 - 17455770
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17455727 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17455770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 17608909 - 17608866
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17608909 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17608866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 17720765 - 17720722
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17720765 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17720722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 21704378 - 21704421
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  21704378 gatcttcatcagaatctccatcaggtgattcttcttcagattca 21704421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 22148363 - 22148320
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22148363 gatcttcatcagaatctccatcaggtgattcttcttcagattca 22148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 22677963 - 22677920
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22677963 gatcttcatcagaatctccatcaggtgattcttcttcagattca 22677920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 23298124 - 23298081
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23298124 gatcttcatcagaatctccatcaggtgattcttcttcagattca 23298081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 23363943 - 23363900
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23363943 gatcttcatcagaatctccatcaggtgattcttcttcagattca 23363900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 23394256 - 23394213
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23394256 gatcttcatcagaatctccatcaggtgattcttcttcagattca 23394213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 23698627 - 23698584
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23698627 gatcttcatcagaatctccatcaggtgattcttcttcagattca 23698584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 24568935 - 24568892
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24568935 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24568892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 24809763 - 24809720
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24809763 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24809720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 24825889 - 24825932
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24825889 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24825932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 24826038 - 24826105
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||  ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24826038 actttgagtgagcgaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24826105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 24981824 - 24981867
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24981824 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24981867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27051251 - 27051294
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27051251 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27051294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 27462009 - 27461966
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27462009 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27461966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27621186 - 27621229
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27621186 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27621229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 27621335 - 27621402
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||||| || |||| ||| |||| |||||||||||||||    
T  27621335 actttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 27621402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 30236440 - 30236483
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  30236440 gatcttcatcagaatctccatcaggtgattcttcttcagattca 30236483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 31350381 - 31350338
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31350381 gatcttcatcagaatctccatcaggtgattcttcttcagattca 31350338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 31420512 - 31420469
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31420512 gatcttcatcagaatctccatcaggtgattcttcttcagattca 31420469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 31835327 - 31835284
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31835327 gatcttcatcagaatctccatcaggtgattcttcttcagattca 31835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 34053807 - 34053764
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34053807 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34053764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 34773756 - 34773713
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34773756 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34773713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 35217350 - 35217307
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  35217350 gatcttcatcagaatctccatcaggtgattcttcttcagattca 35217307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 36689545 - 36689502
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  36689545 gatcttcatcagaatctccatcaggtgattcttcttcagattca 36689502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 37738981 - 37739024
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  37738981 gatcttcatcagaatctccatcaggtgattcttcttcagattca 37739024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 39499901 - 39499944
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  39499901 gatcttcatcagaatctccatcaggtgattcttcttcagattca 39499944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 40392205 - 40392162
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  40392205 gatcttcatcagaatctccatcaggtgattcttcttcagattca 40392162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 42044627 - 42044584
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  42044627 gatcttcatcagaatctccatcaggtgattcttcttcagattca 42044584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 43620308 - 43620351
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  43620308 gatcttcatcagaatctccatcaggtgattcttcttcagattca 43620351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 43620375 - 43620524
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  43620375 ttttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaaca 43620474  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
     |||||||||||||||||||||||| ||| |||| |||||| ||||||||    
T  43620475 ggatcttcaacacttaaagtgtttagatccttagcttcctcgatagcagt 43620524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 19465739 - 19465603
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| || || ||||||||||||||||    
T  19465739 cctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgcaccttgagggaactaacaagatcttcaacac 19465640  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||| ||| |||| ||||||||| |||||    
T  19465639 ttaaagtgtttagatccttagcttcctcaatggcagt 19465603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 21704452 - 21704588
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| || |||||||||||||    
T  21704452 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgtaccttgagggaactgacaagatctt 21704551  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaat 226  Q
    ||||||| |||||||||| ||| |||| |||||||||    
T  21704552 caacactcaaagtgtttagatccttagcttcctcaat 21704588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 24809683 - 24809547
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  ||||| || ||||| ||||||||||||||||    
T  24809683 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttaagtgagctaacaagatcttcaacac 24809584  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  24809583 ttaaagtatttagatccttagcttcctcaatggcagt 24809547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 20553498 - 20553446
Alignment:
Q  180 acaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  20553498 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 20553446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 13532291 - 13532334
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  13532291 gatcttcatcagaatctccatctggtgattcttcttcagattca 13532334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 16002310 - 16002353
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  16002310 gatctttatcagaatctccatcaggtgattcttcttcagattca 16002353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 19465819 - 19465776
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||||||||| |||||||||||||||    
T  19465819 gatcttcatcagaatctccatcaggtgactcttcttcagattca 19465776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 20553662 - 20553619
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  20553662 gatcttcatcggaatctccatcaggtgattcttcttcagattca 20553619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 36591531 - 36591574
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  36591531 gatcttcatcaaaatctccatcaggtgattcttcttcagattca 36591574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 39354343 - 39354300
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  39354343 gatcttcatcaaaatctccatcaggtgattcttcttcagattca 39354300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 13532434 - 13532492
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaat 226  Q
    ||||| || ||||||||||| |||||||| |||||||||| ||| |||| |||||||||    
T  13532434 ttgagggaactgacaagatcctcaacactcaaagtgtttagatccttagcttcctcaat 13532492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 121; Significance: 4e-62; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 35743 - 35963
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    |||||||||||||||||||||| |||||||| ||||||||    
T  35743 agtaggatcttcatcagaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttatatggtagagcaatggat 35842  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| |||  |||||      ||||||||||||||||| ||| |||| |||||||| |||  |||||||||| ||||||||||||||||||||||| ||    
T  35843 ttactcttccaagaaggttcatgttcattaagacttatctcatgaactctgagagagttgagtagatcttcaaaacttaaagtgtttaaatctttagctt 35942  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  35943 cctcaatagcagtcacctttg 35963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 133803 - 134023
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    |||||||||||||||||||||| |||||||| ||||||||    
T  133803 agtaggatcttcatcagaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttatatggtagagcaatggat 133902  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| |||  |||||      ||||||||||||||||| ||| |||| |||||||| |||  |||||||||| ||||||||||||||||||||||| ||    
T  133903 ttactcttccaagaaggttcatgttcattaagacttatctcatgaactctgagagagttgagtagatcttcaaaacttaaagtgtttaaatctttagctt 134002  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  134003 cctcaatagcagtcacctttg 134023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 238
Target Start/End: Original strand, 157451 - 157663
Alignment:
Q  33 aggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||||||   |||   | |||||||||||||||||||||||||||| |||| |||||||    
T  157451 aggaccttcatctgaatctccatcaggtgattcttcttcagattcaact--ttaaaagtttttgatgacttccctttagatggtagagcaattgatttac 157548  T
Q  130 tattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 223  Q
    | ||||||| |||      |||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  157549 tcttcttagcaggctcatgttcatttagatttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctc 157648  T
Q  224 aatagcagtcacctt 238  Q
    ||||||||| |||||    
T  157649 aatagcagtaacctt 157663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 45373 - 45306
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  45373 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 45306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 45557 - 45518
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcaga 74  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  45557 gatcttcatcagaatctccatcaggtgattcttcttcaga 45518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 30 - 226
Target Start/End: Original strand, 2546 - 2752
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||  |||||||    
T  2546 agtaggatcttcatcagaatatccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagtaatggat 2645  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||| | ||| ||||||      |||||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  2646 ttaatcttcctagaaggttcatgttcattaagacatatctcgtgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatatttagctt 2745  T
Q  220 cctcaat 226  Q
    |||||||    
T  2746 cctcaat 2752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 22253908 - 22254128
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    |||||||||||||||| ||||||||||||||  ||| |||    
T  22253908 agtaggatcttcatcagaatctccatcaggtgattcttcttcctattcaacaactttaagagcttttgatgacttctctttagatggtagagtaatagat 22254007  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| || |||| ||      ||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| | ||    
T  22254008 ttactctttttagtagactcatgttcattaagacttatctcatgaactttgagagagctaacaagatcatcaacacttaaagtgtttaaatctttggctt 22254107  T
Q  220 cctcaatagcagtcacctttg 240  Q
    || ||||||||||||||||||    
T  22254108 ccccaatagcagtcacctttg 22254128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 28703012 - 28702792
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||| ||||||| |||||||| | ||||||||||| | | |||| |||    ||||||||||||||||||||| ||||||||| ||||| ||    
T  28703012 agtaggatcttcgtcagaatctccatcagataattcttcttcatacttaacagctttaagagcttttgatgacttcccttttgatggtagagcaatgaat 28702913  T
Q  126 ttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| || |||||||||||||      |||| |||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||  ||    
T  28702912 ttactctttttagaaggttcatgctcattaaggcttatctcatgaactttgagagagttgacaagatcttcaacactcaaagtgtttaaatctttaactt 28702813  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  28702812 cctcaatagcagtcacctttg 28702792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 24723683 - 24723897
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||| | ||| |||| |||    
T  24723683 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcactttagatagaagagcaatagat 24723782  T
Q  126 ttactattcttag-aag-----gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| |||     ||||||| ||||||||| |    ||||| ||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  24723783 ttactcttcttagcaagctcatgttcatttagacttatctc----actttaagaaagttgacaagatcttcaacacttaaagtgtttaaatctttagctt 24723878  T
Q  220 cctcaatagcagtcacctt 238  Q
     |||||||||||| |||||    
T  24723879 actcaatagcagtaacctt 24723897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 34 - 238
Target Start/End: Complemental strand, 22783413 - 22783199
Alignment:
Q  34 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    |||||||||||| |||  ||||| |||||||||||||||||||| || || |    ||||||||||||||| ||| |  |||||||  |||||||||| |    
T  22783413 ggatcttcatcaaaatccccatcgggtgattcttcttcagattccacgaccttcaaagcttttgatgactttcctcttaatggtagggcaatggatttgc 22783314  T
Q  130 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 223  Q
    | ||||| ||||      ||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  22783313 ttttcttggaagattcatgttcattgagacttatcttatgaactttgagagagctgacaagatcttcaacacttaaagtgcttaaatctttagcttcctc 22783214  T
Q  224 aatagcagtcacctt 238  Q
    |||||||||||||||    
T  22783213 aatagcagtcacctt 22783199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 21137531 - 21137629
Alignment:
Q  142 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    ||||||||| ||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21137531 gttcattaaaacttatctcatgtacttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttg 21137629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 23185982 - 23185816
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaac---aacttagcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||   ||   ||||||||| ||||||||||  ||||||||| |||| ||||    
T  23185982 agtaggatcttcatctgaatctccatcaggtgaatcttcttcagattcaactttaa--gagcttttgaagacttcccttaggatggtagagcaattgatt 23185885  T
Q  127 tactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    |||| ||| ||| ||      ||||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  23185884 tactcttcctagcaggttcatgttcatttagacttatctcatgaactttgagagagctgacaatatctt 23185816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 23597245 - 23597079
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaac---aacttagcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||   ||   ||||||||| ||||||||||  ||||||||| |||| ||||    
T  23597245 agtaggatcttcatctgaatctccatcaggtgaatcttcttcagattcaactttaa--gagcttttgaagacttcccttaggatggtagagcaattgatt 23597148  T
Q  127 tactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    |||| ||| ||| ||      ||||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  23597147 tactcttcctagcaggttcatgttcatttagacttatctcatgaactttgagagagctgacaatatctt 23597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 21163542 - 21163475
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  21163542 actttgagtgagctgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 21163475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 24574502 - 24574557
Alignment:
Q  185 atcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24574502 atcttgaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 24574557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 10900165 - 10900079
Alignment:
Q  144 tcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagca 230  Q
    ||||| ||||| ||| ||| ||| |||| |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10900165 tcattgagactgatctcatgaaccttgaaagagctcataagatcttcaacacttaaagtgtttaaatctctagtttcctcaatagca 10900079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 24416703 - 24416554
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgaca 182  Q
    |||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||      | ||||| | ||| ||  |||  || ||||  || ||||||    
T  24416703 ttttgaagactttcctttagatggtagagcaatggatttactcttcttagaagactcatgctcatttaaactcatttcatgcaccttgaaggaactgaca 24416604  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  24416603 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 24416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 24842658 - 24842716
Alignment:
Q  180 acaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  24842658 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 24842716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 24329493 - 24329277
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |  |||             || |||||| | ||| ||||||||||||||| ||||    
T  24329493 gatcttcatcagaatctccatcaggtgattcttcttcagattcaccggctttgtaggctttggaagattttgaagtctttcctttagatggtagagcaat 24329394  T
Q  122 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||    
T  24329393 ggatttactcttcttagaggtttcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtatttagatcctta 24329294  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  24329293 gcttcctcaatagcagt 24329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 27230587 - 27230723
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  27230587 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 27230686  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  27230687 ttaaagtatttagatccttagcttcctcaatagcagt 27230723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 35262152 - 35262288
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  35262152 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 35262251  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  35262252 ttaaagtatttagatccttagcttcctcaatagcagt 35262288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 35272777 - 35272913
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  35272777 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 35272876  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  35272877 ttaaagtatttagatccttagcttcctcaatagcagt 35272913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 4219113 - 4219180
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  4219113 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4219180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 9899168 - 9899101
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9899168 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9899101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 10276204 - 10276271
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  10276204 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10276271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 11396767 - 11396700
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  11396767 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11396700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 22916455 - 22916388
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22916455 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22916388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 34791812 - 34791745
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  34791812 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 34791745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 39171689 - 39171622
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  39171689 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39171622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 40249826 - 40249893
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  40249826 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40249893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 4218964 - 4219007
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4218964 gatcttcatcagaatctccatcaggtgattcttcttcagattca 4219007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 9764358 - 9764291
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||| | ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9764358 actttgcgtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9764291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 9764507 - 9764464
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9764507 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9764464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 9899317 - 9899274
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9899317 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9899274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 10276055 - 10276098
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10276055 gatcttcatcagaatctccatcaggtgattcttcttcagattca 10276098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 11396916 - 11396873
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11396916 gatcttcatcagaatctccatcaggtgattcttcttcagattca 11396873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 21163691 - 21163648
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  21163691 gatcttcatcagaatctccatcaggtgattcttcttcagattca 21163648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 26876036 - 26876079
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26876036 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26876079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 26876110 - 26876252
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| || |||||||||||||    
T  26876110 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgtaccttgagggaactgacaagatctt 26876209  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||| ||| |||| |||||| || |||||    
T  26876210 caacacttaaagtgtttagatccttagcttcctctatggcagt 26876252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27230507 - 27230550
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27230507 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27230550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 28723062 - 28723019
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  28723062 gatcttcatcagaatctccatcaggtgattcttcttcagattca 28723019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 29253288 - 29253331
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  29253288 gatcttcatcagaatctccatcaggtgattcttcttcagattca 29253331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 34791961 - 34791918
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34791961 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34791918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 35262072 - 35262115
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  35262072 gatcttcatcagaatctccatcaggtgattcttcttcagattca 35262115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 35272697 - 35272740
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  35272697 gatcttcatcagaatctccatcaggtgattcttcttcagattca 35272740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 39171838 - 39171795
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  39171838 gatcttcatcagaatctccatcaggtgattcttcttcagattca 39171795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 40249677 - 40249720
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  40249677 gatcttcatcagaatctccatcaggtgattcttcttcagattca 40249720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 43091896 - 43091963
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| | ||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  43091896 actttgagtgtgctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 43091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 43353498 - 43353541
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  43353498 gatcttcatcagaatctccatcaggtgattcttcttcagattca 43353541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 43353647 - 43353714
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  43353647 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 43353714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 19304020 - 19303956
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||||    
T  19304020 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 19303956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 24303691 - 24303627
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| || | ||||||||||||||||| ||||||||||||||||| ||| |||||| ||||    
T  24303691 ttgagagaacttataagatcttcaacacttagagtgtttaaatctttagcttcatcaataacagt 24303627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 28722910 - 28722850
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatag 228  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  28722910 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatag 28722850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 19301714 - 19301671
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  19301714 gatcttcatcagaatctccatcgggtgattcttcttcagattca 19301671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 19304163 - 19304120
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  19304163 gatcttcatcagaatctccatctggtgattcttcttcagattca 19304120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 22916604 - 22916561
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  22916604 gatcttcattagaatctccatcaggtgattcttcttcagattca 22916561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 24416770 - 24416727
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  24416770 gatcttcatcagaatctccatcaagtgattcttcttcagattca 24416727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 24803386 - 24803343
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  24803386 gatcttcatcagaatctccatctggtgattcttcttcagattca 24803343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 29253437 - 29253504
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||||| || |||| ||| |||  |||||||||||||||    
T  29253437 actttgagtgagctaacaagatcttcaacacttaacgtatttagatccttaacttcctcaatagcagt 29253504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 43091747 - 43091790
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  43091747 gatcctcatcagaatctccatcaggtgattcttcttcagattca 43091790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 24803234 - 24803176
Alignment:
Q  177 ctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    ||||||| |||||||||||| |||||||||||||| || | ||||||||| ||||||||    
T  24803234 ctgacaaaatcttcaacactcaaagtgtttaaatccttggcttcctcaatggcagtcac 24803176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 21919703 - 21919643
Alignment:
Q  167 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaata 227  Q
    |||||||||||| | ||||||||||||||||| |||||||| |||  ||| ||||||||||    
T  21919703 tttgagagagcttataagatcttcaacacttagagtgtttagatccgtagcttcctcaata 21919643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 18613475 - 18613693
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    |||||||||||||| |||||||||||| ||| ||||||||    
T  18613475 agtaggatcttcatcagaatctccatatggtgattcttcttcagattcaacaactttaagagcttttgatgactcccctttagatggcagagcaatggat 18613574  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| ||      ||||||| | ||||||| ||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  18613575 ttactcttcttagcaggctcatgttcatttaaacttatctcatgaacctttagagagcttacaagatcttcaacacttaaagtgtttaaatctttagctt 18613674  T
Q  220 cctcaatagcagtcacctt 238  Q
    ||||||||||||| |||||    
T  18613675 cctcaatagcagtaacctt 18613693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 30 - 231
Target Start/End: Original strand, 17720183 - 17720391
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||||||   |||   |||||||||||||| ||||||||||||||| |||| ||||    
T  17720183 agtaggattttcatctgaatctccatcaggtgattcttcttcagattcaact--ttaagagcttttgatgactttcctttagatggtagagcaatagatt 17720280  T
Q  127 tactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 220  Q
    ||||  |||||| ||||||||      | ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17720281 tactcctcttagcaggttcatgttcatttagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttc 17720380  T
Q  221 ctcaatagcag 231  Q
    |||||||||||    
T  17720381 ctcaatagcag 17720391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 25450038 - 25449822
Alignment:
Q  34 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    |||||||| ||||||| |||||||||||||| ||||||||| ||  ||||||    | ||||||||||||||||||| ||||||||| ||||||||||||    
T  25450038 ggatcttcgtcagaatctccatcaggtgatttttcttcagactcggcaacttttagaacttttgatgacttcccttttgatggtagagcaatggatttac 25449939  T
Q  130 tattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 223  Q
    | || || ||||||||||      ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  25449938 tctttttggaaggttcatgctcattaagacttatctcatgaactttgagagagctgataagatcttcaacactgaaagtgtttaaatctttagcttcctc 25449839  T
Q  224 aatagcagtcacctttg 240  Q
    ||| |||||||| ||||    
T  25449838 aatggcagtcacttttg 25449822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 21196474 - 21196259
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    ||||||||||||||| |||  |||||| ||||| |||||||||||||||||   |||   |||||||| ||||||||||||||||||||| |||| ||||    
T  21196474 agtaggatcttcatctgaacctccatctggtgaatcttcttcagattcaact--ttaagagcttttgaagacttccctttagatggtagatcaattgatt 21196377  T
Q  127 tactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 220  Q
    |||| ||||||| |||      |||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  21196376 tactcttcttagcaggctcatgttcatttagagttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgttcaaatctttagcttc 21196277  T
Q  221 ctcaatagcagtcacctt 238  Q
    |||||||||||| |||||    
T  21196276 ctcaatagcagtgacctt 21196259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 21126144 - 21125928
Alignment:
Q  34 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaac--tta--gcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||| || ||  |||  |||||||| ||||| ||||| ||| ||| | |||||||||| |    
T  21126144 ggatcctcatcagaatccccatcaggagattcttcttcagattccacgacctttaatgcttttgaagactttccttttgattgtatagcaatggatttgc 21126045  T
Q  130 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 223  Q
    | |||||  |||      ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21126044 ttttcttgaaagattcatgttcattgagacttatctcatgaactttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctc 21125945  T
Q  224 aatagcagtcacctttg 240  Q
    ||||||| |||||||||    
T  21125944 aatagcaatcacctttg 21125928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 22445103 - 22444931
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    ||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||    ||||||||||||||||||||| |||||| || ||||||||    
T  22445103 agtagaatcttcatcaaaatctccattaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcccttttgatggttgagcaatggat 22445004  T
Q  126 ttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaa 192  Q
    ||||| ||||||||      | ||||||||||||||||| ||| ||||||||||||||| | |||||||||||    
T  22445003 ttactcttcttagaggattcatgttcattaagacttatctcatgaactttgagagagctaataagatcttcaa 22444931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 22450337 - 22450165
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    ||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||    ||||||||||||||||||||| |||||| || ||||||||    
T  22450337 agtagaatcttcatcaaaatctccattaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcccttttgatggttgagcaatggat 22450238  T
Q  126 ttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaa 192  Q
    ||||| ||||||||      | ||||||||||||||||| ||| ||||||||||||||| | |||||||||||    
T  22450237 ttactcttcttagaggattcatgttcattaagacttatctcatgaactttgagagagctaataagatcttcaa 22450165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 21207593 - 21207377
Alignment:
Q  34 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaac-tta---gcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||| || || |||   |||||||| ||||| || || ||| ||| | |||||||||| |    
T  21207593 ggatcctcatcagaatccccatcaggagattcttcttcagattccacgaccttaaatgcttttgaagactttccatttgatagtaaagcaatggatttgc 21207494  T
Q  130 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 223  Q
    | |||||  |||      ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21207493 ttttcttgaaagattcatgttcattgagacttatctcatgaactttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctc 21207394  T
Q  224 aatagcagtcacctttg 240  Q
    ||||||| |||||||||    
T  21207393 aatagcaatcacctttg 21207377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 23023176 - 23023394
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    ||||||||| |||||||||| |||||  ||||||||||||||||| || |||||||    ||| ||||||||| | |||||  ||||||   ||||||||    
T  23023176 agtaggatcctcatcagaatctccattcggtgattcttcttcagactccacaactttgagagcctttgatgaccttcctttgaatggtaaggcaatggat 23023275  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    || || ||||| || |      ||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||| ||    
T  23023276 tttcttttcttggatgactcatgttcattaagactaatctcatgaactttaagagagctgacaagatcttcaacacttagagtgttcaaatctttagctt 23023375  T
Q  220 cctcaatagcagtcacctt 238  Q
    |||||||||||||||||||    
T  23023376 cctcaatagcagtcacctt 23023394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 216
Target Start/End: Original strand, 20943070 - 20943272
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    |||||||| |||||| |||| ||||| ||||||||||||||||||||||||   |||   ||| || ||||||| ||||||||||||||| |||| ||||    
T  20943070 agtaggattttcatctgaatctccattaggtgattcttcttcagattcaact--ttaagagctctttatgactttcctttagatggtagagcaattgatt 20943167  T
Q  127 tactattcttagaag------gttcattaa---------gacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatc 211  Q
    |||| ||||||| ||      ||||||| |         |||| ||| ||| |||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  20943168 tactcttcttagcagactcatgttcatttactcttctttgactaatctcatgaactttgatagacctgacaagatcttcaacacctaaagtgtttaaatc 20943267  T
Q  212 tttag 216  Q
    |||||    
T  20943268 tttag 20943272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 22431580 - 22431528
Alignment:
Q  188 ttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22431580 ttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttg 22431528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 4176424 - 4176573
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggtt------cattaagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | ||      |||| | ||| ||  |||  |||||||| ||||| |||    
T  4176424 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggttttatgctcatttaaactcatttcatgcactttgagtgagctaaca 4176523  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  4176524 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4176573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 7691170 - 7691021
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  7691170 ttttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaaca 7691071  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  7691070 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 7691021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 22017627 - 22017837
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca----acaacttagcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| |||||||||||||||||||||     |   |  ||||| |||||||| ||||||||||||||| |||| |||||| |    
T  22017627 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtatgctttggatgactttcctttagatggtagagcaatagatttatt 22017726  T
Q  131 attcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| ||      | | ||||| ||||| ||  |||  |||||||| || |||||||||| ||||||||| |||||||||| ||| |||| |||||||    
T  22017727 cttctttgaggattcatgctcattcagactcatttcatgtactttgagggaactgacaagattttcaacactcaaagtgtttagatccttagcttcctca 22017826  T
Q  225 atagcagtcac 235  Q
    || ||||||||    
T  22017827 atggcagtcac 22017837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 35639738 - 35639589
Alignment:
Q  89 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 182  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||    
T  35639738 ttttgaggtctttcctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaaca 35639639  T
Q  183 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  35639638 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 35639589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 3180805 - 3180872
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  3180805 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3180872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 5641327 - 5641260
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5641327 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 5842408 - 5842475
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5842408 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5842475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 7516478 - 7516545
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  7516478 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 7516545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 12615940 - 12615873
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  12615940 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12615873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 12739732 - 12739799
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  12739732 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12739799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 21876352 - 21876419
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  21876352 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 21876419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 36238047 - 36237980
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36238047 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36237980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 38093663 - 38093730
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  38093663 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38093730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 38104289 - 38104356
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  38104289 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38104356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 47609553 - 47609486
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  47609553 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 47609486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 51630809 - 51630742
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  51630809 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 51630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 3180656 - 3180699
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  3180656 gatcttcatcagaatctccatcaggtgattcttcttcagattca 3180699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 5641483 - 5641440
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5641483 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5641440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 5842259 - 5842302
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5842259 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5842302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 7516329 - 7516372
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  7516329 gatcttcatcagaatctccatcaggtgattcttcttcagattca 7516372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 7691237 - 7691194
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  7691237 gatcttcatcagaatctccatcaggtgattcttcttcagattca 7691194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 12616089 - 12616046
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  12616089 gatcttcatcagaatctccatcaggtgattcttcttcagattca 12616046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 19186409 - 19186476
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||||| || |||| ||| |||| |||||||||||||||    
T  19186409 actttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 19186476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 20874986 - 20874779
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca----acaacttagcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| |||||||||||||||||||||     |   | |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  20874986 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 20874887  T
Q  131 attcttagaaggt------tcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     |||||||| | |      ||||| ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| ||| |||    
T  20874886 cttcttagaggattcattctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcatca 20874787  T
Q  225 atagcagt 232  Q
    || |||||    
T  20874786 atggcagt 20874779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 21876203 - 21876246
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  21876203 gatcttcatcagaatctccatcaggtgattcttcttcagattca 21876246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 35639805 - 35639762
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  35639805 gatcttcatcagaatctccatcaggtgattcttcttcagattca 35639762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 36238196 - 36238153
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  36238196 gatcttcatcagaatctccatcaggtgattcttcttcagattca 36238153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 38104140 - 38104183
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  38104140 gatcttcatcagaatctccatcaggtgattcttcttcagattca 38104183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 47609702 - 47609659
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  47609702 gatcttcatcagaatctccatcaggtgattcttcttcagattca 47609659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 51630958 - 51630915
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  51630958 gatcttcatcagaatctccatcaggtgattcttcttcagattca 51630915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 4176357 - 4176400
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  4176357 gatcttcatctgaatctccatcaggtgattcttcttcagattca 4176400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 19186260 - 19186303
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  19186260 gatcctcatcagaatctccatcaggtgattcttcttcagattca 19186303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 12739584 - 12739626
Alignment:
Q  36 atcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  12739584 atcttcatcagaatctccatcgggtgattcttcttcagattca 12739626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 27857098 - 27857143
Alignment:
Q  33 aggatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||||| |||| |||| || |||||||||||||||    
T  27857098 aggatcttcatcagaatctccagcaggagactcttcttcagattca 27857143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 47624 - 47843
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||| ||||||||    
T  47624 agtaggatctccatcaaaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggcagagcaatggat 47723  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||| || |||      |||||||||||||| || ||| ||||||||||||||| ||| |||| ||||||| ||| |||||||||||||||| ||    
T  47724 ttactcttcctaaaaggttcatgttcattaagacttctctcatgaactttgagagagctaacatgatcatcaacac-taatgtgtttaaatctttagctt 47822  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  47823 cctcaatagcagtcacctttg 47843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 209713 - 209933
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |    ||||||| ||||||| ||| | ||||||||| ||||||||    
T  209713 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattccacaacctttaaagcttttaatgactttcctcttgatggtagagcaatggat 209812  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    || || |||||  |||      ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  209813 ttgcttttcttgaaagattcatgttcattaagacttatctcatgaactttgagagagctgacaagatcctcaacacttaaagtgtttaaatctttagctt 209912  T
Q  220 cctcaatagcagtcacctttg 240  Q
      |||||||||||||||||||    
T  209913 aatcaatagcagtcacctttg 209933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 30 - 211
Target Start/End: Complemental strand, 43515 - 43324
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||| |||    
T  43515 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttcaaagcttttgatgacttccctttagatggtagagcaatagat 43416  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatc 211  Q
    |||||  | |||| ||      ||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  43415 ttactccttttagtagactcatgttcattgagacttatctcatgaactttgagagagctgacaagatcttaaacacttaaagtgtttaaatc 43324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 27444 - 27228
Alignment:
Q  34 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    ||||||||||||||||  |||||||||||||||||||||||||| || || |    ||||||||||||||| ||| | ||||||||| |||||||||| |    
T  27444 ggatcttcatcagaatccccatcaggtgattcttcttcagattccacgaccttcaaagcttttgatgactttcctcttgatggtagagcaatggatttgc 27345  T
Q  130 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 223  Q
    | ||||| ||||      ||||||| ||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  27344 ttttcttggaagattcatgttcattgagacttatctcatgaactttgagagagccgacaagatcttcaacacttaaagtgtttaaatctttagcttcctc 27245  T
Q  224 aatagcagtcacctttg 240  Q
    ||||| |||||||||||    
T  27244 aatagtagtcacctttg 27228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 111399 - 111179
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||| ||||| |    | ||||||||||||| ||| | ||||||||| ||||| ||    
T  111399 agtaggatcttcgtcagaatccccatcaggtgattcttcttcagattccacaacctttaaaacttttgatgactttcctcttgatggtagagcaatgtat 111300  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| |||||  |||      ||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||    
T  111299 ttacttttcttgaaagattcatgttcattaagacttatctcatgaactttgagagagctgacaatatcctcaacacttaaagtgtttaaatctttaggtt 111200  T
Q  220 cctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||    
T  111199 cctcaatagcagtcacctttg 111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 31 - 232
Target Start/End: Original strand, 12264 - 12472
Alignment:
Q  31 gtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggattt 127  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||   |||   ||| |||||||||| ||||||||||||||| |||| |||||    
T  12264 gtaggatcttcatctgaatctccatcaggtgattcttcttcagattcaact--ttaagagctcttgatgactttcctttagatggtagagcaattgattt 12361  T
Q  128 actattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcc 221  Q
    ||| ||||||| |||      |||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12362 actcttcttagcaggctcatgttcattgagacttatctcatgaacattgagagagctgacaagatcttcaacacttaaagtgtttaagtctttagcttcc 12461  T
Q  222 tcaatagcagt 232  Q
    || ||||||||    
T  12462 tctatagcagt 12472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 97; Significance: 9e-48; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 6967 - 7182
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    ||||||||||||| | |||| |||||||||||| |||||||||||||||||   |||   |||||||| |||||||||||||||||||||  ||| ||||    
T  6967 agtaggatcttcacctgaatctccatcaggtgaatcttcttcagattcaact--ttaagagcttttgaagacttccctttagatggtagagtaattgatt 7064  T
Q  127 tactattcttag-aag-----gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 220  Q
    |||| ||||||| |||     ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  7065 tactcttcttagcaagctcatgttcatttagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgttcaaatatttagcttc 7164  T
Q  221 ctcaatagcagtcacctt 238  Q
    |||||||||||| |||||    
T  7165 ctcaatagcagtaacctt 7182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 34590 - 34454
Alignment:
Q  102 cctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacac 195  Q
    ||||||||||||||| ||||||||||||| |||||||| |      | ||||| | ||| ||  |||  || ||||| || |||||||||||||||||||    
T  34590 cctttagatggtagagcaatggatttactcttcttagaggactcatgctcatttaaactcatttcatgcaccttgagggaactgacaagatcttcaacac 34491  T
Q  196 ttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||||||| ||| |||| |||||||||||||||    
T  34490 ttaaagtgtttagatccttagcttcctcaatagcagt 34454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 34670 - 34627
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34670 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 11869 - 11651
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||| | ||||||| |||| |||||||| |||| || |||||    ||||||||||||||||||||||||||||||| ||||  ||    
T  11869 agtaggatcttcatcagagtctccatcaagtgactcttcttctgatttaataactttaagagcttttgatgacttccctttagatggtagagcaataaat 11770  T
Q  126 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| |||      |||||| ||||||||| ||| ||| |||||| ||||||||||||||||||||||| |||| ||||||||||||| ||    
T  11769 ttacttttcttagcaggctcatgttcatttagacttatctcatgaaccttgagaaagctgacaagatcttcaacacttcaagtttttaaatctttagctt 11670  T
Q  220 cctcaatagcagtcacctt 238  Q
    ||||||||||||| |||||    
T  11669 cctcaatagcagtaacctt 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 16542 - 16324
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||||| | ||||||| |||| |||||||| |||| || |||||    ||||||||||||||||||||||||||||||| ||||  ||    
T  16542 agtaggatcttcatcagagtctccatcaagtgactcttcttctgatttaataactttaagagcttttgatgacttccctttagatggtagagcaataaat 16443  T
Q  126 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||||| ||||||| |||      |||||| ||||||||| ||| ||| |||||| ||||||||||||||||||||||| |||| ||||||||||||| ||    
T  16442 ttacttttcttagcaggctcatgttcatttagacttatctcatgaaccttgagaaagctgacaagatcttcaacacttcaagtttttaaatctttagctt 16343  T
Q  220 cctcaatagcagtcacctt 238  Q
    ||||||||||||| |||||    
T  16342 cctcaatagcagtaacctt 16324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 240
Target Start/End: Complemental strand, 67173 - 66960
Alignment:
Q  37 tcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactat 132  Q
    |||||||||||||  |||||||||||||||||||||||||| || || |    | ||||||||||||| ||||| ||||||||| |||||||||| || |    
T  67173 tcttcatcagaatccccatcaggtgattcttcttcagattccacgacctttaaaacttttgatgactttccttttgatggtagagcaatggattttcttt 67074  T
Q  133 tcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaat 226  Q
    ||||  |||      ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||||| ||| |||||||||    
T  67073 tcttgaaagattcatgttcattaagacttatctcatgaactttgagagagctgacaagatcctcaacacttaaggtgtttaaatctctagcttcctcaat 66974  T
Q  227 agcagtcacctttg 240  Q
    |||| |||||||||    
T  66973 agcaatcacctttg 66960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 238
Target Start/End: Complemental strand, 166460 - 166247
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||  |||||| |||||||||||||||||||||  | | | |    |||| |||| ||| ||||||||||||||| |||| |||||| |    
T  166460 gatcttcatcagaacctccatctggtgattcttcttcagattcactagccttgtatgctttagatggctttcctttagatggtagagcaatagatttatt 166361  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || | |||||      | || || ||  ||| ||| ||||| || |||||||||||||||||||| |||||||||| ||| |||| ||| |||    
T  166360 cttctttgaggattcatgctcattcaggctcatttcatgaaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcttca 166261  T
Q  225 atagcagtcacctt 238  Q
    || ||||| |||||    
T  166260 atggcagtaacctt 166247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 6979 - 7193
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttagcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    ||||||||||||||| || | ||||||||||||||||||||||||||||||     |||| |||||||||| ||||||||||  || || || |||||||    
T  6979 agtaggatcttcatctgactctccatcaggtgattcttcttcagattcaacttaagagctcttgatgactttcctttagatgacagcacgattgatttac 7078  T
Q  130 tattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 223  Q
    | ||||||| |||      |||||| ||||| ||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  7079 tcttcttagtaggctcatgttcattgagactaatctcatgaactttgagagagctgacaagatcatcaacacttaaattgtttaaatctttagcttcctc 7178  T
Q  224 aatagcagtcacctt 238  Q
    ||||||||| |||||    
T  7179 aatagcagtaacctt 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 30 - 228
Target Start/End: Complemental strand, 1990 - 1782
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    ||||||||||| |||||||| |||||||||||| ||||||||||||| || |||||    || ||| ||||||||| |||||||||| ||| |||| |||    
T  1990 agtaggatctttatcagaatctccatcaggtgactcttcttcagatttaataactttaagagttttagatgacttcactttagatggaagagcaatagat 1891  T
Q  126 ttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 219  Q
    ||  | ||||||| ||| ||||      | ||||||||| ||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||    
T  1890 tttgtcttcttagtaggctcatgtttatttagacttatctcatgaaccttgagagagttgacaagatcttcaacacttaaaatgtttaaatctttagctt 1791  T
Q  220 cctcaatag 228  Q
    |||||||||    
T  1790 cctcaatag 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 17549 - 17647
Alignment:
Q  142 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17549 gttcattgagacttatctcatgaacttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagaagtcacctttg 17647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 14581 - 14631
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaac 80  Q
    |||||||||||||||| ||| | ||||| ||||||||||||||||||||||    
T  14581 agtaggatcttcatcaaaatcttcatcaagtgattcttcttcagattcaac 14631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 25888 - 25711
Alignment:
Q  30 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 125  Q
    |||||||||||||||| | | |||||||||||| |||| ||||||||||| |||||    ||||||||||||||||||||||||||||||| |||| |||    
T  25888 agtaggatcttcatcaaagtctccatcaggtgactctt-ttcagattcaataactttaagagcttttgatgacttccctttagatggtagagcaatagat 25790  T
Q  126 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacactta 198  Q
    ||||| ||||||| ||      ||||||| ||||||||  ||| ||| ||||||||||| |||||||||||||||||||    
T  25789 ttactcttcttagcaggcgcatgttcatttagacttatttcatgaaccttgagagagctaacaagatcttcaacactta 25711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 3267 - 3057
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    | |    |||||| |||||||| ||||||||||||||| |||| || |||||    
T  3267 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtaagctttggatgactttcctttagatggtagagcaatagacttact 3168  T
Q  131 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || |      | ||||| ||||| ||  ||| ||||||||| || ||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  3167 cttctttgaggactcatgctcattcagactcatttcatgaactttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctca 3068  T
Q  225 atagcagtcac 235  Q
    || ||||||||    
T  3067 atggcagtcac 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 3935 - 3840
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatt 126  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||| |||||||||    
T  3935 gatcttcaccagagtctccatcaggtgattcttcttcagattcaacaactttaagagattttgatgacttccctttagatggtagagcaatggatt 3840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 53353 - 53286
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  53353 actttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 53286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 44945 - 44735
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| || ||||||| ||||||||||    | |    |||||| |||||||| ||||||||||||||| ||||  | |||||    
T  44945 gatcttcatcagaatctccatctggcgattcttgttcagattcactggccttgtaagctttggatgactttcctttagatggtagagcaataaacttact 44846  T
Q  131 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || |      | ||||| ||||| ||  ||| ||||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||| |    
T  44845 cttctttgaggacgcatgctcattcagactcatttcatgaactttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctta 44746  T
Q  225 atagcagtcac 235  Q
    || ||||||||    
T  44745 atggcagtcac 44735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 55248 - 55038
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| || ||||||| ||||||||||    | |    |||||| |||||||| ||||||||||||||| ||||  | |||||    
T  55248 gatcttcatcagaatctccatctggcgattcttgttcagattcactggccttgtaagctttggatgactttcctttagatggtagagcaataaacttact 55149  T
Q  131 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| || |      | ||||| ||||| ||  ||| ||||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||| |    
T  55148 cttctttgaggacgcatgctcattcagactcatttcatgaactttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctta 55049  T
Q  225 atagcagtcac 235  Q
    || ||||||||    
T  55048 atggcagtcac 55038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 238
Target Start/End: Complemental strand, 1448 - 1235
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| | |||| |||||||||||||||||||||  | | | |    |||| |||| ||| ||||||||||||||| |||| |||||| |    
T  1448 gatcttcatcagaatcttcatctggtgattcttcttcagattcactagccttgtatgctttagatggctttcctttagatggtagagcaatagatttatt 1349  T
Q  131 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| ||||      | ||||| || || ||  ||| ||| ||||| || |||||||||| ||||||||| |||||||||| ||| |||| |||||||    
T  1348 cttctttgaagactcatgctcatttaggctcatttcatgaaccttgagggaactgacaagattttcaacactcaaagtgtttagatccttagcttcctca 1249  T
Q  225 atagcagtcacctt 238  Q
    || |||||||||||    
T  1248 atggcagtcacctt 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 1160 - 1089
Alignment:
Q  167 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 238  Q
    |||||| || |||||||||| ||||||||| |||||||||| ||| |||| ||||||||| |||||||||||    
T  1160 tttgagggaactgacaagattttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcacctt 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 75576 - 75784
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||| ||||    | |||| ||| |||| ||||||||||| ||| |||| |||||  |    
T  75576 gatcttcatcagaatctccatcagaggattcttcttcagattcaacgactttgagatctttagataactttcctttagatggaagagcaatagatttttt 75675  T
Q  131 attcttag------aaggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacact-taaagtgtttaaatctttagtttcctc 223  Q
     |||||||       | | ||||| ||||||||  ||| ||| |||| | |||| |||||||||||||||||  ||||||||||||||||||| ||| |     
T  75676 cttcttagcaaactcatgctcattgagacttatttcatgaaccttgaaatagcttacaagatcttcaacactcaaaagtgtttaaatctttagcttcttt 75775  T
Q  224 aatagcagt 232  Q
    |||||||||    
T  75776 aatagcagt 75784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 23737 - 23953
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca--------acaa-ctt----agcttttgatgacttccctttagatggtagaacaat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||        | || |||    || ||| || ||||||||||||||||||||| ||||    
T  23737 gatcttcatcagaatctccatcaggtgattcttcttcagattcactggccttataagctttagaagatttggaggacttccctttagatggtagagcaat 23836  T
Q  122 ggatttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 215  Q
     |||||||| ||||||||      | | ||||| ||||| ||  |||  ||||||||  | |||||||||||||||||||| ||||| |||| ||| |||    
T  23837 agatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgaggaaactgacaagatcttcaacactaaaagtatttagatcctta 23936  T
Q  216 gtttcctcaatagcagt 232  Q
    | |||||||||||||||    
T  23937 gcttcctcaatagcagt 23953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 38573 - 38506
Alignment:
Q  165 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 232  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  38573 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 38722 - 38679
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  38722 gatcttcatcagaatctccatcaggtgattcttcttcagattca 38679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1820 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 84 - 154
Alignment:
Q  168 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 238  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||||||||||    
T  84 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcacctt 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 3049 - 2838
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaa--ctta---gcttttgatgacttccctttagatggtagaacaatggatttac 129  Q
    ||||||||||||||| |||||| || |||||||||||||||||| |||  |||    ||||| |||| ||| |||||| |||||||| |||| |||||||    
T  3049 gatcttcatcagaatctccatctggcgattcttcttcagattca-caagccttgtatgctttagatggctttcctttatatggtagagcaatagatttac 2951  T
Q  130 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtg-tttaaatctttagtttcct 222  Q
    | ||||| || |      | ||||| ||||| ||  ||| ||| ||||| || |||||||||||||||||||| |||||| |||| ||| |||| |||||    
T  2950 tcttctttgaggactcatgctcattcagactcatttcatgaaccttgagggaactgacaagatcttcaacactcaaagtgttttagatccttagattcct 2851  T
Q  223 caatagcagtcac 235  Q
    |||| ||||||||    
T  2850 caatggcagtcac 2838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1507 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 1138 - 931
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca----acaacttagcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| |||||||||||||||||||||     |   |  ||||| |||||||| ||||||||||||||| |||| ||| || |    
T  1138 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtatgctttagatgactttcctttagatggtagagcaatagatctatt 1039  T
Q  131 attcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     ||||| ||      | | ||||| | ||| ||  |||  |||||||| || |||||||||||||||||||| |||||||||| ||| |||  |||||||    
T  1038 cttctttgaggattcatgctcattcaaactcatttcatgtactttgagggaactgacaagatcttcaacactcaaagtgtttagatccttaacttcctca 939  T
Q  225 atagcagt 232  Q
    ||||||||    
T  938 atagcagt 931  T

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Target: scaffold0068 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 9532 - 9489
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9532 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9489  T

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Target: scaffold0068; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 226
Target Start/End: Complemental strand, 9458 - 9322
Alignment:
Q  96 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 189  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| || |||||||||||||    
T  9458 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgtaccttgagggaactgacaagatctt 9359  T
Q  190 caacacttaaagtgtttaaatctttagtttcctcaat 226  Q
    ||||||| |||||||||| ||| |||| |||||||||    
T  9358 caacactcaaagtgtttagatccttagcttcctcaat 9322  T

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Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 3796 - 4003
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 130  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  3796 gatcttcatcagaatctccatctggtgactcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 3895  T
Q  131 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 224  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  3896 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 3995  T
Q  225 atagcagt 232  Q
    || |||||    
T  3996 atggcagt 4003  T

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Target: scaffold0925 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0925
Description:

Target: scaffold0925; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 3832 - 3775
Alignment:
Q  178 tgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    ||||||||||||||||||| |||||||||| ||| |||| ||||||||| ||||||||    
T  3832 tgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcac 3775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0925; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 3985 - 3942
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| ||| || |||||||||||||||||||||    
T  3985 gatcttcatcagaatctccgtctggtgattcttcttcagattca 3942  T

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Target: scaffold0758 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 2807 - 2875
Alignment:
Q  167 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    |||||||||||| |  |||||||| ||||||| |||||||| ||| |||| ||||||||||||||||||    
T  2807 tttgagagagcttatgagatcttcgacacttagagtgtttagatccttagcttcctcaatagcagtcac 2875  T

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Target: scaffold0892 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 165 - 122
Alignment:
Q  35 gatcttcatcagaatttccatcaggtgattcttcttcagattca 78  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  165 gatcttcatcagaatctccatctggtgattcttcttcagattca 122  T

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Target: scaffold0443 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 2609 - 2555
Alignment:
Q  186 tcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 240  Q
    |||||||||||||||||||||| ||| |||| ||||||||| |||||||| ||||    
T  2609 tcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcacttttg 2555  T

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Target: scaffold0185 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 31752 - 31810
Alignment:
Q  177 ctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 235  Q
    ||||||||||||||||||||||||||||| | ||| |||  ||||||||| ||||||||    
T  31752 ctgacaagatcttcaacacttaaagtgttaagatccttaacttcctcaatggcagtcac 31810  T

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Target: scaffold0231 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 20255 - 20161
Alignment:
Q  37 tcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggattt 127  Q
    ||||||| ||||| || |||||| |||||||||||||||||||  ||||    |||||| |||||||| ||||||||||| ||| |||| |||||    
T  20255 tcttcattagaatctcgatcaggggattcttcttcagattcaatgactttgagagctttagatgactttcctttagatggcagagcaatagattt 20161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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