View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13295_low_63 (Length: 238)
Name: NF13295_low_63
Description: NF13295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13295_low_63 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 37308089 - 37308307
Alignment:
| Q |
1 |
tttttccgtcattcaaactcaatgcgtacgaatgctggaaattttgtacatagaagatgacttttcttttttactaaacacacgagaggacttaaatttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37308089 |
tttttccgtcattcaaactcaatgcgtacgaatgctggaaattttgtacatagaagatgacttttcttttttactaaacacacgagaggacttaaatttc |
37308188 |
T |
|
| Q |
101 |
agtgtgacggggtgtgtagacttaccaaataccaatcagaagacaactgattttgaagattgcaccattcaacattttgcaaagccggtggaggctctta |
200 |
Q |
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||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37308189 |
agtgtgacgaggtgtgtagacttacc-aataccaatcagaagacaactgattttgaagattgcaccattcaacattttgcaaagccggtggagcctctta |
37308287 |
T |
|
| Q |
201 |
ttggtaataagcttgtagttggt |
223 |
Q |
| |
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|||| |||||||||||||||| |
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| T |
37308288 |
ttgg---taagcttgtagttggt |
37308307 |
T |
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