View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13295_low_8 (Length: 654)

Name: NF13295_low_8
Description: NF13295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13295_low_8
NF13295_low_8
[»] chr8 (43 HSPs)
chr8 (19-265)||(4943289-4943528)
chr8 (441-647)||(4943929-4944138)
chr8 (263-442)||(4943697-4943883)
chr8 (506-603)||(9305607-9305705)
chr8 (126-182)||(584486-584542)
chr8 (506-601)||(5642787-5642883)
chr8 (506-601)||(5644728-5644824)
chr8 (506-601)||(15935587-15935683)
chr8 (506-601)||(24768617-24768713)
chr8 (506-601)||(24331530-24331625)
chr8 (535-597)||(23245573-23245635)
chr8 (506-601)||(32684763-32684859)
chr8 (535-597)||(24528821-24528883)
chr8 (506-601)||(38711822-38711919)
chr8 (544-601)||(34227405-34227462)
chr8 (506-603)||(29211946-29212045)
chr8 (506-601)||(38703798-38703894)
chr8 (506-601)||(41509582-41509678)
chr8 (506-568)||(24375847-24375910)
chr8 (535-601)||(31974921-31974987)
chr8 (506-597)||(2873531-2873623)
chr8 (506-601)||(11830254-11830350)
chr8 (506-601)||(30221849-30221945)
chr8 (506-601)||(36637071-36637167)
chr8 (535-598)||(29346086-29346149)
chr8 (535-601)||(5566714-5566780)
chr8 (535-597)||(9235369-9235431)
chr8 (535-601)||(23389097-23389163)
chr8 (535-601)||(30872626-30872692)
chr8 (544-598)||(37545131-37545185)
chr8 (506-601)||(12478652-12478748)
chr8 (506-601)||(18029690-18029786)
chr8 (506-601)||(33958659-33958752)
chr8 (535-601)||(13174947-13175013)
chr8 (552-601)||(13558578-13558627)
chr8 (544-601)||(27637308-27637365)
chr8 (535-568)||(28786491-28786524)
chr8 (544-601)||(32393389-32393446)
chr8 (535-599)||(14698113-14698177)
chr8 (535-599)||(15568934-15568998)
chr8 (533-597)||(23288931-23288995)
chr8 (507-601)||(25653905-25654001)
chr8 (506-601)||(35990747-35990843)
[»] chr4 (40 HSPs)
chr4 (506-601)||(21507904-21507999)
chr4 (506-601)||(7913314-7913409)
chr4 (506-601)||(32681899-32681994)
chr4 (506-601)||(22854042-22854139)
chr4 (506-601)||(4102867-4102963)
chr4 (506-603)||(18165089-18165188)
chr4 (506-601)||(41325413-41325509)
chr4 (506-601)||(42056057-42056153)
chr4 (535-601)||(14121477-14121543)
chr4 (506-601)||(39152035-39152132)
chr4 (535-608)||(32682402-32682475)
chr4 (506-601)||(3652349-3652445)
chr4 (506-601)||(18510061-18510157)
chr4 (506-600)||(31856973-31857068)
chr4 (506-599)||(25244560-25244654)
chr4 (535-601)||(30918996-30919062)
chr4 (544-601)||(16589059-16589116)
chr4 (506-601)||(29104238-29104335)
chr4 (535-595)||(5283685-5283745)
chr4 (506-601)||(39133163-39133259)
chr4 (506-601)||(49166724-49166820)
chr4 (515-609)||(49277830-49277926)
chr4 (506-601)||(49296202-49296298)
chr4 (535-601)||(17696295-17696361)
chr4 (314-352)||(41536917-41536955)
chr4 (535-601)||(50773367-50773433)
chr4 (506-568)||(2032615-2032679)
chr4 (535-595)||(8809963-8810023)
chr4 (506-601)||(23184835-23184930)
chr4 (536-600)||(50719669-50719733)
chr4 (535-609)||(23091847-23091922)
chr4 (527-609)||(29172717-29172800)
chr4 (506-568)||(29700611-29700674)
chr4 (530-601)||(52194390-52194461)
chr4 (506-569)||(55927190-55927253)
chr4 (535-601)||(30409336-30409402)
chr4 (506-597)||(9780486-9780581)
chr4 (541-601)||(26040743-26040804)
chr4 (535-568)||(46088159-46088192)
chr4 (533-609)||(49533134-49533210)
[»] chr7 (52 HSPs)
chr7 (506-601)||(14187794-14187890)
chr7 (506-601)||(12005464-12005560)
chr7 (506-601)||(17155686-17155781)
chr7 (506-601)||(442613-442709)
chr7 (506-601)||(20055021-20055117)
chr7 (506-601)||(30632076-30632171)
chr7 (506-601)||(20164304-20164401)
chr7 (506-601)||(31749398-31749494)
chr7 (506-601)||(31863911-31864007)
chr7 (506-601)||(47370231-47370327)
chr7 (506-603)||(11576771-11576869)
chr7 (506-601)||(2514113-2514209)
chr7 (506-603)||(8391039-8391138)
chr7 (534-597)||(25601920-25601984)
chr7 (506-601)||(31307929-31308025)
chr7 (506-601)||(32199962-32200058)
chr7 (506-601)||(43707127-43707223)
chr7 (506-603)||(17051892-17051991)
chr7 (506-601)||(35158261-35158356)
chr7 (535-597)||(1853184-1853246)
chr7 (535-601)||(5864676-5864742)
chr7 (535-601)||(26254788-26254854)
chr7 (506-598)||(13263950-13264043)
chr7 (506-601)||(21444066-21444162)
chr7 (506-601)||(31750798-31750894)
chr7 (535-603)||(33441095-33441163)
chr7 (534-601)||(21521999-21522066)
chr7 (535-601)||(2300900-2300966)
chr7 (535-601)||(3401880-3401946)
chr7 (506-599)||(10975606-10975700)
chr7 (535-601)||(32946364-32946430)
chr7 (535-601)||(34258337-34258403)
chr7 (535-608)||(2240652-2240725)
chr7 (535-608)||(2241086-2241159)
chr7 (535-603)||(7967752-7967820)
chr7 (506-603)||(18828676-18828775)
chr7 (506-557)||(19093196-19093247)
chr7 (544-599)||(21022598-21022653)
chr7 (535-609)||(45687812-45687887)
chr7 (506-601)||(10067832-10067929)
chr7 (535-597)||(10931974-10932036)
chr7 (535-597)||(27484838-27484900)
chr7 (535-609)||(37913884-37913958)
chr7 (535-601)||(38192794-38192860)
chr7 (527-597)||(42957572-42957642)
chr7 (527-597)||(43393790-43393860)
chr7 (506-598)||(24233378-24233471)
chr7 (544-601)||(36374224-36374281)
chr7 (544-601)||(40938194-40938251)
chr7 (506-601)||(2624772-2624867)
chr7 (506-601)||(15721008-15721104)
chr7 (544-600)||(25571176-25571232)
[»] chr2 (40 HSPs)
chr2 (506-601)||(874432-874528)
chr2 (506-601)||(38127841-38127936)
chr2 (506-601)||(43830702-43830799)
chr2 (506-601)||(1975683-1975779)
chr2 (506-601)||(19272740-19272836)
chr2 (506-601)||(42794090-42794186)
chr2 (527-601)||(18048895-18048969)
chr2 (506-603)||(30497227-30497325)
chr2 (506-601)||(9419700-9419796)
chr2 (535-601)||(36525354-36525420)
chr2 (535-608)||(29949627-29949700)
chr2 (509-609)||(31989424-31989525)
chr2 (506-601)||(18756550-18756646)
chr2 (506-608)||(25103935-25104039)
chr2 (506-609)||(31377619-31377724)
chr2 (506-601)||(15543914-15544010)
chr2 (506-601)||(28781822-28781918)
chr2 (506-601)||(33218526-33218622)
chr2 (506-601)||(38949935-38950031)
chr2 (535-609)||(29878910-29878985)
chr2 (535-601)||(2526430-2526496)
chr2 (535-601)||(7008004-7008070)
chr2 (535-601)||(7318170-7318236)
chr2 (505-597)||(16590530-16590624)
chr2 (506-603)||(26498711-26498809)
chr2 (506-601)||(39373072-39373169)
chr2 (527-597)||(41906073-41906143)
chr2 (544-601)||(19253478-19253535)
chr2 (506-608)||(29883987-29884091)
chr2 (544-601)||(34831570-34831627)
chr2 (535-598)||(23381241-23381304)
chr2 (535-601)||(29096825-29096891)
chr2 (535-597)||(42223107-42223169)
chr2 (535-599)||(15580598-15580663)
chr2 (544-601)||(16303861-16303918)
chr2 (544-601)||(17188860-17188917)
chr2 (535-600)||(17886646-17886711)
chr2 (535-568)||(35791107-35791140)
chr2 (506-601)||(776475-776571)
chr2 (506-601)||(18755225-18755321)
[»] chr3 (35 HSPs)
chr3 (506-601)||(13439765-13439861)
chr3 (509-608)||(14004468-14004568)
chr3 (506-601)||(2985698-2985794)
chr3 (506-601)||(13049641-13049737)
chr3 (506-601)||(32721708-32721804)
chr3 (544-600)||(45007942-45007998)
chr3 (506-601)||(52839500-52839596)
chr3 (506-600)||(14220569-14220664)
chr3 (506-600)||(14224796-14224891)
chr3 (527-609)||(25124979-25125061)
chr3 (506-601)||(13041564-13041660)
chr3 (534-609)||(28298186-28298262)
chr3 (506-601)||(31293653-31293749)
chr3 (506-609)||(54571294-54571398)
chr3 (506-600)||(7272639-7272734)
chr3 (506-601)||(14870132-14870227)
chr3 (506-601)||(19111142-19111237)
chr3 (523-597)||(25158871-25158946)
chr3 (535-609)||(17030599-17030673)
chr3 (506-601)||(5572154-5572250)
chr3 (506-601)||(22817960-22818056)
chr3 (506-568)||(34314782-34314845)
chr3 (535-601)||(22447046-22447112)
chr3 (507-603)||(30226176-30226274)
chr3 (535-597)||(31073888-31073950)
chr3 (544-601)||(4658711-4658768)
chr3 (506-601)||(7226147-7226246)
chr3 (544-601)||(16897328-16897385)
chr3 (506-609)||(37050084-37050186)
chr3 (506-601)||(300246-300342)
chr3 (506-597)||(28735525-28735617)
chr3 (535-598)||(52962312-52962375)
chr3 (535-601)||(26770151-26770217)
chr3 (535-568)||(25158968-25159001)
chr3 (535-595)||(22438832-22438892)
[»] chr1 (27 HSPs)
chr1 (506-601)||(26399055-26399153)
chr1 (506-599)||(20158851-20158944)
chr1 (506-601)||(5457159-5457255)
chr1 (527-601)||(9209653-9209727)
chr1 (506-601)||(26190809-26190905)
chr1 (506-601)||(5932040-5932136)
chr1 (506-601)||(21770833-21770929)
chr1 (535-598)||(13436931-13436994)
chr1 (506-601)||(23161904-23161999)
chr1 (535-598)||(25060020-25060083)
chr1 (506-601)||(6284378-6284475)
chr1 (507-583)||(24023136-24023213)
chr1 (506-601)||(14909959-14910055)
chr1 (506-585)||(22152047-22152127)
chr1 (535-601)||(41189915-41189981)
chr1 (544-601)||(47980004-47980061)
chr1 (535-603)||(16420989-16421057)
chr1 (506-601)||(27665995-27666091)
chr1 (506-601)||(44961084-44961180)
chr1 (516-609)||(5469361-5469456)
chr1 (535-578)||(26664192-26664235)
chr1 (535-597)||(33864133-33864196)
chr1 (535-597)||(33916726-33916789)
chr1 (507-601)||(47231195-47231290)
chr1 (535-601)||(22387406-22387472)
chr1 (544-602)||(45195632-45195690)
chr1 (310-346)||(7574152-7574188)
[»] scaffold0209 (1 HSPs)
scaffold0209 (126-182)||(13246-13302)
[»] chr6 (28 HSPs)
chr6 (506-601)||(9234923-9235018)
chr6 (506-601)||(10343576-10343672)
chr6 (506-601)||(12292941-12293037)
chr6 (527-601)||(26475841-26475915)
chr6 (506-608)||(32216943-32217044)
chr6 (506-601)||(22495901-22495996)
chr6 (535-601)||(9222558-9222624)
chr6 (535-608)||(18591350-18591423)
chr6 (506-598)||(33708753-33708846)
chr6 (506-601)||(1227755-1227851)
chr6 (506-601)||(16659663-16659759)
chr6 (506-601)||(13462698-13462793)
chr6 (535-601)||(8237717-8237783)
chr6 (544-601)||(17158353-17158410)
chr6 (506-601)||(686492-686588)
chr6 (508-601)||(10546064-10546159)
chr6 (506-601)||(21544209-21544305)
chr6 (506-601)||(22362697-22362793)
chr6 (506-601)||(34414471-34414567)
chr6 (507-601)||(16119772-16119867)
chr6 (535-601)||(3108712-3108778)
chr6 (506-599)||(7321961-7322055)
chr6 (535-601)||(13729167-13729233)
chr6 (535-601)||(26882155-26882221)
chr6 (506-567)||(34077546-34077608)
chr6 (544-601)||(2270531-2270588)
chr6 (506-585)||(14291166-14291246)
chr6 (535-603)||(29942602-29942670)
[»] chr5 (38 HSPs)
chr5 (527-601)||(21039943-21040017)
chr5 (506-599)||(31312654-31312748)
chr5 (506-601)||(11721344-11721440)
chr5 (506-601)||(30916561-30916657)
chr5 (506-601)||(34309511-34309607)
chr5 (506-608)||(8855469-8855572)
chr5 (503-601)||(23159545-23159644)
chr5 (535-597)||(20355097-20355159)
chr5 (506-603)||(35687380-35687477)
chr5 (506-601)||(22756265-22756361)
chr5 (506-603)||(23108833-23108932)
chr5 (506-601)||(41123345-41123441)
chr5 (535-601)||(12148139-12148205)
chr5 (535-609)||(31567703-31567777)
chr5 (544-601)||(4414005-4414062)
chr5 (540-601)||(27330987-27331048)
chr5 (506-601)||(6117664-6117760)
chr5 (506-601)||(23188766-23188862)
chr5 (506-601)||(25962880-25962976)
chr5 (535-601)||(25233857-25233923)
chr5 (535-601)||(25298017-25298083)
chr5 (535-601)||(31920138-31920204)
chr5 (544-601)||(17885943-17886000)
chr5 (506-598)||(26243182-26243275)
chr5 (506-597)||(4561804-4561896)
chr5 (506-601)||(6896985-6897081)
chr5 (506-601)||(7577893-7577989)
chr5 (506-601)||(28796425-28796521)
chr5 (523-609)||(21144165-21144252)
chr5 (544-599)||(42368517-42368572)
chr5 (535-585)||(21125175-21125225)
chr5 (535-601)||(40765462-40765528)
chr5 (535-597)||(42778887-42778949)
chr5 (535-568)||(17190799-17190832)
chr5 (544-601)||(21180160-21180217)
chr5 (541-598)||(29691042-29691099)
chr5 (506-577)||(8861407-8861479)
chr5 (506-601)||(38874538-38874634)
[»] scaffold0258 (1 HSPs)
scaffold0258 (506-601)||(18801-18897)
[»] scaffold0004 (2 HSPs)
scaffold0004 (506-601)||(212591-212687)
scaffold0004 (535-597)||(82230-82292)
[»] scaffold0002 (1 HSPs)
scaffold0002 (506-601)||(332142-332238)
[»] scaffold0154 (1 HSPs)
scaffold0154 (506-601)||(9299-9396)
[»] scaffold0121 (1 HSPs)
scaffold0121 (535-601)||(12546-12612)
[»] scaffold0125 (1 HSPs)
scaffold0125 (506-608)||(3486-3589)
[»] scaffold0010 (1 HSPs)
scaffold0010 (515-603)||(145100-145189)
[»] scaffold0022 (1 HSPs)
scaffold0022 (506-601)||(63232-63328)
[»] scaffold0026 (1 HSPs)
scaffold0026 (527-601)||(84252-84326)
[»] scaffold0067 (1 HSPs)
scaffold0067 (535-568)||(25796-25829)


Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-116; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 4943289 - 4943528
Alignment:
Q  19 aacacgagcacacatgaaagtgtaaacaaaatcaaataatttcatcataaccaattcttaccatttgaataacaatgatgaagtaattcttcattaatta 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      
T  4943289 aacacgagcacacatgaaagtgtaaacaaaatcaaataatttcatcataaccaattcttaccatttgaataacaatgatgaagtaattcttcactaat-- 4943386  T
Q  119 ttaattaaagaaatttcatgagaaagccaccaacgtcctaatatcttaattaactaagcaacgcatcttcatagaatgttgatgatgagaaccacatgga 218  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4943387 -----taaagaaatttcatgagaaagccaccaacgtcctaatatcttaattaactaagcaacgcatcttcatagaatgttgatgatgagaaccacatgga 4943481  T
Q  219 acaatatcataggagacggaagctatcaataccgaaaaaagaagaac 265  Q
     ||||||||||||||||||||||||||||||||||||||||||||||    
T  4943482 tcaatatcataggagacggaagctatcaataccgaaaaaagaagaac 4943528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 441 - 647
Target Start/End: Original strand, 4943929 - 4944138
Alignment:
Q  441 tttatgtgatcactgaagataatttagtttggttttggttctacattttgaaatgctcctattttat---ttgagcaaatttcaatttaccccttctata 537  Q
    |||||||| |||| |||||||||| ||||||||||| ||||| ||||||||||||||| ||||||||   ||||| |||||||| |||||||||||||||    
T  4943929 tttatgtggtcaccgaagataattaagtttggttttcgttctgcattttgaaatgctcatattttataatttgagtaaatttcagtttaccccttctata 4944028  T
Q  538 tcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatctnnnnnnnnttacaggagaaaaatcgaaa 637  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||        |||||||||||||||| |||    
T  4944029 tcatcaattttgtaccgtcaaaattcatgaaagtttaaaactaaaaatattcaaattataaggatgcaatctaaaaaaaattacaggagaaaaatcaaaa 4944128  T
Q  638 atgacctatg 647  Q
    ||||||||||    
T  4944129 atgacctatg 4944138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 263 - 442
Target Start/End: Original strand, 4943697 - 4943883
Alignment:
Q  263 aaccaagttgtaaggagaagcttgccgctcttataaacacatgtcattttgtcttcgtgagtttaactcaattgataaggacaagacata---tatt--- 356  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| ||| |||||||| ||||||   |||        
T  4943697 aaccaatttgtaaggagaagattgcccctcttataaacacatgtcatcttgtccgtgtgagtttaactcagttggtaaggaca-gacataatatatgcaa 4943795  T
Q  357 -gtttggggttcaaa-cccggttaccaccaaagaaaacacatgtcatcttttgtccgatataagacttttaacactttcctctatctt 442  Q
     || ||| ||||||| ||| || |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  4943796 ggtctggagttcaaatcccagtcaccaccaaagaaaacacatgccatcttttgtccgatacgagacttttaacactttcctctatctt 4943883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 506 - 603
Target Start/End: Original strand, 9305607 - 9305705
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    ||||||||||||||| ||||||||| | | ||||| || ||||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||    
T  9305607 atttgagcaaatttcgatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggttcaaaaccaaaaatcttcaaattacaaggatg 9305705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 584486 - 584542
Alignment:
Q  126 aagaaatttcatgagaaagccaccaacgtcctaatatcttaattaactaagcaacgc 182  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  584486 aagaaatttcatgagaaagccaccaccgtcctaatatcttaattaaccaagcaacgc 584542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 5642883 - 5642787
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | ||||||| || |||||||||| |||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  5642883 atttgagcaaatttcggtttaccccctgctatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 5642787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 5644824 - 5644728
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | ||||||| || |||||||||| |||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  5644824 atttgagcaaatttcggtttaccccctgctatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 5644728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 15935587 - 15935683
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| |||||||||||||||||||||||||||| || |||||| ||||||  ||||||||||||||    
T  15935587 atttgagcaaatttcggtttaccccctaccatatcttcaattttgtacagtcaaaattcatgaaggtctaaaaccaaaaattctcaaattacaagga 15935683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 24768713 - 24768617
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||||| | ||||| || |||||||||||||||||||||| || ||| ||||| |||||| |||||||||||||||    
T  24768713 atttgagcaaatttcggtttaccccttgccatatcttcgattttgtacagtcaaaattcattaaggttcaaaaccaaaaatcttcaaattacaagga 24768617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 24331530 - 24331625
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||||||| | ||||| || |||||||||| |||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  24331530 atttgagcaaatttcggtttacccctgccatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 24331625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 23245635 - 23245573
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  23245635 atatcatcgattttgtacagtcaaaattcatgaaagtccaaaactaaaaatcttcaaattaca 23245573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 32684763 - 32684859
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  |||||||||| | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  32684763 atttaagcaaatttcggtttaccccttgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 32684859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 24528883 - 24528821
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||| |||||||||||||||||||||||||| | |||||| ||||| ||||||||||||    
T  24528883 atatcatcgattttgtacagtcaaaattcatgaaaatctaaaaccaaaaagattcaaattaca 24528821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 38711822 - 38711919
Alignment:
Q  506 atttgagcaaatttcaatttaccc--cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  |||||||  || ||||||| || |||||| |||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  38711822 attttagcaaatttcggtttaccctcctgctatatcttcgattttgaacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 38711919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 34227462 - 34227405
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||    
T  34227462 attttgtacagtcaaaattcatgaaggtctaaaaccaaaaatcttcaaattacaagga 34227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 603
Target Start/End: Complemental strand, 29212045 - 29211946
Alignment:
Q  506 atttgagcaaatttcaatttac--cccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||||||||||| |||||  |||| | |||||||  |||||||| |||||||||||||||| ||  ||||| | |||| |||||||||||||||||    
T  29212045 atttgagcaaatttcagtttactcccctaccatatcatatattttgtatagtcaaaattcatgaaggtccaaaaccagaaatcttcaaattacaaggatg 29211946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 38703798 - 38703894
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || |||||||||||| |||||||||||| ||  ||||| |||||| |||||||||||||||    
T  38703798 atttgagcaaatttcggtttaccccctaccatatcttcgattttgtacagtaaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 38703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 41509582 - 41509678
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || |||||||||| |||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  41509582 atttgagcaaatttcggtttaccccctgtcatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 41509678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 568
Target Start/End: Original strand, 24375847 - 24375910
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaa 568  Q
    |||||||||||||||| |||||||| | | |||||||||||||||||||||| |||||||||||    
T  24375847 atttgagcaaatttcagtttaccccctgccatatcatcaattttgtacagtcgaaattcatgaa 24375910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 31974921 - 31974987
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||| |||||| ||  |||||||||||    
T  31974921 atatcttcaattttgtacagtcaaaattcatgaaggttcaaaaccaaaaatctttgaattacaagga 31974987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 597
Target Start/End: Complemental strand, 2873623 - 2873531
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||||||||||  |||| ||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||    
T  2873623 atttgagcaaatttcggtttatcccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattaca 2873531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 11830350 - 11830254
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  11830350 atttgagcaaatttcggtttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 11830254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 30221945 - 30221849
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||| ||||||| |||||||| || | |||| ||| ||||||||| ||||||||||||||| ||| ||||| |||||  ||||||||| |||||    
T  30221945 atttgagaaaatttcgatttaccctctgccatattatcgattttgtacggtcaaaattcatgaaggttcaaaaccaaaaaacttcaaattataagga 30221849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 36637167 - 36637071
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||| | |||| |||||  | ||||| ||| ||||||||||||||| ||  ||||||||||||||||||||| ||||||    
T  36637167 atttgagcaaatttcggtttactctcttccatatctacgattttatacggtcaaaattcatgaatgtccaaaactaaaaatattcaaattccaagga 36637071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 598
Target Start/End: Complemental strand, 29346149 - 29346086
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| ||||||||||||    
T  29346149 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaa 29346086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 5566714 - 5566780
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||||||||||||||||||| ||  ||||| | |||| |||||||||||||||    
T  5566714 atatcgtcgattttgtacagtcaaaattcatgaaggtccaaaaccagaaatcttcaaattacaagga 5566780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 9235431 - 9235369
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||| |||| | |||||||||||    
T  9235431 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaattcttcaaattaca 9235369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 23389163 - 23389097
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||||||||||||| ||||| ||  ||||| |||||| |||||||||||||||    
T  23389163 atatcttcgattttgtacagtcaaaatttatgaaggtccaaaaccaaaaatcttcaaattacaagga 23389097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 30872626 - 30872692
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||| ||||||||||||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  30872626 atattatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 30872692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 598
Target Start/End: Original strand, 37545131 - 37545185
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    ||||||||||||||||||||||||| ||  ||||| |||||| ||||||||||||    
T  37545131 attttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaa 37545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 12478748 - 12478652
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| |  ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  12478748 atttgagcaaatttcggtttaccccctatcatatctttgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 12478652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 18029786 - 18029690
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||| |||||||  |||||||| | | |||||||||||||| ||||||||||||||||||| ||  ||||| |||||  || ||||||| ||||    
T  18029786 atttgagaaaatttcggtttaccccctgccatatcatcaattttatacagtcaaaattcatgaaggtccaaaacaaaaaaacttaaaattactagga 18029690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 33958752 - 33958659
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||| |||||||||   ||||| || ||||||||| ||||||||| ||||| ||  ||||  |||||  |||||||||||||||    
T  33958752 atttgagcaaatttcagtttacccctc--atatcttcgattttgtacggtcaaaattgatgaaggtccaaaatcaaaaaatttcaaattacaagga 33958659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 13175013 - 13174947
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||| ||||| | |||| | |||||||||||||    
T  13175013 atatcgtcgattttgtacggtcaaaattcatgaatgttcaaaaccagaaatctgcaaattacaagga 13174947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 601
Target Start/End: Complemental strand, 13558627 - 13558578
Alignment:
Q  552 cagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  13558627 cagtcaaaattcatgaaggtacaaaaccaaaaatcttcaaattacaagga 13558578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 27637308 - 27637365
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||| ||||||||||||||| ||  ||||| | |||| |||||||||||||||    
T  27637308 attttgtactgtcaaaattcatgaaggtccaaaaccagaaatcttcaaattacaagga 27637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Original strand, 28786491 - 28786524
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaa 568  Q
    |||||||| |||||||||||||||||||||||||    
T  28786491 atatcatcgattttgtacagtcaaaattcatgaa 28786524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 32393446 - 32393389
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||| ||||||||| || ||  ||||| |||||| |||||||||||||||    
T  32393446 attttgtacagttaaaattcataaaggtccaaaacaaaaaatcttcaaattacaagga 32393389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 535 - 599
Target Start/End: Complemental strand, 14698177 - 14698113
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    |||||||  ||||||||| |||||||||||| || ||| ||||  |||||| |||||||||||||    
T  14698177 atatcattgattttgtactgtcaaaattcataaaggttcaaaataaaaaatcttcaaattacaag 14698113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 535 - 599
Target Start/End: Original strand, 15568934 - 15568998
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    |||| ||| ||||||||| || ||| |||||||| || |||||| |||||| |||||||||||||    
T  15568934 atattatcgattttgtactgttaaatttcatgaaggtctaaaaccaaaaatcttcaaattacaag 15568998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 533 - 597
Target Start/End: Complemental strand, 23288995 - 23288931
Alignment:
Q  533 ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||||  ||||||||| ||||| |||||||||  | |||||| |||||| |||||||||||    
T  23288995 ctatatcattgattttgtacggtcaatattcatgaagttctaaaaccaaaaatcttcaaattaca 23288931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 601
Target Start/End: Original strand, 25653905 - 25654001
Alignment:
Q  507 tttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaa-agtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||  ||||||| || | ||||| || ||||||||| |||||||||||||||  ||  ||||| ||||||  ||||||||||||||    
T  25653905 tttgagcaaatttcggtttaccctctaccatatcttcgattttgtactgtcaaaattcatgaagggtccaaaaccaaaaatcatcaaattacaagga 25654001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 35990747 - 35990843
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||  || ||||||||| |||||||||||||||  |  |||||||||||   ||||||||||||||    
T  35990747 atttgagcaaatttcggtttaccccctatcatattttcgattttgtactgtcaaaattcatgaagatccaaaactaaaaagcatcaaattacaagga 35990843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 21507999 - 21507904
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||||||| ||||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  21507999 atttgagcaaatttcggtttacccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 21507904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 7913314 - 7913409
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  ||||||||| ||||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  7913314 attttagcaaatttcggtttacccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 7913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 32681899 - 32681994
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||| ||||||||  ||||||||| ||||||| || ||||||||| ||||||||||||||| ||||||||| |||||| || ||||||||||||    
T  32681899 atttgaacaaatttcggtttacccctgctatatcttcgattttgtactgtcaaaattcatgaaggtttaaaaccaaaaatctttaaattacaagga 32681994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 22854139 - 22854042
Alignment:
Q  506 atttgagcaaatttcaatttaccccttc--tatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||| |||||||| |   |||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  22854139 atttgagcaaatttcagtttacccccttgttatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 22854042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 4102963 - 4102867
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||||| |||||||||  | ||||| |||||||||||||||||||||||    
T  4102963 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaatattcatgaagatctaaaattaaaaatattcaaattacaagga 4102867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 603
Target Start/End: Original strand, 18165089 - 18165188
Alignment:
Q  506 atttgagcaaatttcaatttac--cccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||||||||||  |||||  |||| | |||||||| ||||||||||||||||||||||||| ||  ||||| | |||| |||||||||||||||||    
T  18165089 atttgagcaaatttcggtttactcccctgccatatcatctattttgtacagtcaaaattcatgaaggtccaaaaccagaaatcttcaaattacaaggatg 18165188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 41325413 - 41325509
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  |||||||| | ||||||| || ||||||||||||| ||||||||||| ||  ||||| ||||||||||||||||||||||    
T  41325413 attttagcaaatttcggtttaccccctgctatatcttcgattttgtacagtcgaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 41325509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 42056153 - 42056057
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | |||||||| ||||||||||||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  42056153 atttgagcaaatttcggtttaccccctgccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 42056057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 14121477 - 14121543
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| ||||||||||||||||||||||||||||  ||||| |||||  |||||||||||||||    
T  14121477 atatcatcgattttgtacagtcaaaattcatgaaagtccaaaaccaaaaaacttcaaattacaagga 14121543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 39152132 - 39152035
Alignment:
Q  506 atttgagcaaatttcaatttacc--ccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| ||||||||  |||||||  ||| |||||||||| ||||||||| |||||||||||||||  || ||||| |||||| |||||||||||||||    
T  39152132 atttgtgcaaatttagatttaccaccctactatatcatcgattttgtacggtcaaaattcatgaagattcaaaacaaaaaatcttcaaattacaagga 39152035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 535 - 608
Target Start/End: Original strand, 32682402 - 32682475
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatc 608  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||| |||||  ||||||||||||||||| ||||    
T  32682402 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaaggatggaatc 32682475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 3652445 - 3652349
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  3652445 atttaagcaaatttcggtttaccccatgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 3652349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 18510157 - 18510061
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| |||||| || | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| ||||| |||||||||    
T  18510157 atttgagcaaatttcgatttactccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaacaaaaaatcttcaagttacaagga 18510061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 600
Target Start/End: Complemental strand, 31857068 - 31856973
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagg 600  Q
    |||||||||||||||  ||| |||| | | ||||| ||||||||||||||||||| |||||||| || |||||| | |||| ||||||||||||||    
T  31857068 atttgagcaaatttctgtttgccccctaccatatcttcaattttgtacagtcaaagttcatgaaggtctaaaaccagaaatcttcaaattacaagg 31856973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 599
Target Start/End: Original strand, 25244560 - 25244654
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    |||||||||| ||||  |||||||| | | |||||||| ||||||||||||||||||||||||| ||  ||||| |||||  |||||||||||||    
T  25244560 atttgagcaattttcggtttaccccctatcatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaag 25244654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 30919062 - 30918996
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  30919062 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 30918996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 16589116 - 16589059
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  16589116 attttgtactgtcaaaattcatgaaggtccaaaactataaatattcaaattacaagga 16589059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 29104335 - 29104238
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaa-ctaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || |||||||||||| |||||||||||| || ||||| | |||||| |||||||||||||||    
T  29104335 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagttaaaattcatgaaggtctaaaaccaaaaaatcttcaaattacaagga 29104238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 595
Target Start/End: Complemental strand, 5283745 - 5283685
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaatta 595  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||| |||||| |||||||||    
T  5283745 atatcatcgattttgtagagtcaaaattcatgaaggttcaaaaccaaaaatcttcaaatta 5283685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 39133259 - 39133163
Alignment:
Q  506 atttgagcaaatttcaattta-ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| ||||  ||||| | ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| ||||||||| |||||    
T  39133259 atttgagcaaatttcgatttgtcccctgccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattagaagga 39133163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 49166820 - 49166724
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  49166820 atttgagcaaatttcggtttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 49166724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 49277830 - 49277926
Alignment:
Q  515 aatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattacaaggatgcaatct 609  Q
    |||||||||||||||| | | |||||||||||||||||  ||||||||| ||||| ||| ||||| ||| ||| |||||||||||||| || |||||    
T  49277830 aatttcaatttaccccctgcgatatcatcaattttgtatcgtcaaaatttatgaaggttcaaaaccaaataatcttcaaattacaaggttggaatct 49277926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 49296202 - 49296298
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||| |||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| ||||| |||||||||    
T  49296202 atttgagcaaatttcggtttgccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaacaaaaaatcttcaagttacaagga 49296298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 17696295 - 17696361
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  17696295 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 17696361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 41536917 - 41536955
Alignment:
Q  314 tcttcgtgagtttaactcaattgataaggacaagacata 352  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  41536917 tcttcgtgagtttaactcaattgataaggacaatacata 41536955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 50773433 - 50773367
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  50773433 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 50773367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 568
Target Start/End: Original strand, 2032615 - 2032679
Alignment:
Q  506 atttgagcaaatttcaatttacccc--ttctatatcatcaattttgtacagtcaaaattcatgaa 568  Q
    |||||||||||||||  ||||||||  | | |||||||| |||||||||||||||||||||||||    
T  2032615 atttgagcaaatttcggtttacccccctgccatatcatcgattttgtacagtcaaaattcatgaa 2032679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 595
Target Start/End: Complemental strand, 8810023 - 8809963
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaatta 595  Q
    |||||||  |||||||||| | |||||||||||| ||| |||||||||||| |||||||||    
T  8810023 atatcattgattttgtacaattaaaattcatgaaggttcaaaactaaaaatcttcaaatta 8809963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 23184930 - 23184835
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||| |||  |||||||| | | ||||| || ||||||||||||||||||||||| ||| |  |||| |||||| |||||||||||||||    
T  23184930 atttgagcaaacttcggtttaccccctgtcatatcttcgattttgtacagtcaaaattcatg-aaggtccaaaccaaaaatcttcaaattacaagga 23184835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 536 - 600
Target Start/End: Complemental strand, 50719733 - 50719669
Alignment:
Q  536 tatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagg 600  Q
    |||| ||||||| |||||||||||||||||||| ||  ||||| |||||| ||||||||| ||||    
T  50719733 tatcttcaatttcgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattataagg 50719669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 609
Target Start/End: Original strand, 23091847 - 23091922
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaact-aaaaatattcaaattacaaggatgcaatct 609  Q
    |||||||| |||| ||| |||||||||| ||||| ||| |||||| |||||| |||||||||||||| || |||||    
T  23091847 atatcatcgatttcgtatagtcaaaatttatgaaggttcaaaactaaaaaatcttcaaattacaaggttggaatct 23091922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 29172717 - 29172800
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattacaaggatgcaatct 609  Q
    ||||||| |||||||| ||||||||||| ||||| ||| ||| ||| ||||| ||| ||| |||||||||||||| || |||||    
T  29172717 ccccttccatatcatctattttgtacagccaaaagtcacgaaggttcaaaaccaaagaatcttcaaattacaaggttggaatct 29172800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 29700674 - 29700611
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaa 568  Q
    |||||||| ||||||| |||||||||| | |||| ||| |||||||||||| ||||||||||||    
T  29700674 atttgagcgaatttcagtttaccccttgcaatatgatcgattttgtacagtaaaaattcatgaa 29700611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 52194390 - 52194461
Alignment:
Q  530 cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| |||||||  ||||||||| |||||||||||| || ||| ||||| |||||  |||||||||||||||    
T  52194390 cttccatatcattgattttgtacggtcaaaattcataaaggttcaaaaccaaaaaacttcaaattacaagga 52194461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 55927253 - 55927190
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaa 569  Q
    |||| ||| ||||||| |||||||||  ||||||||  ||||||||||||||||||| ||||||    
T  55927253 atttcagcgaatttcagtttacccctgttatatcatagattttgtacagtcaaaattaatgaaa 55927190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 30409336 - 30409402
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| ||||| |||||| |||||||||||| ||  ||||| |||||  |||||||||||||||    
T  30409336 atatcatcgattttatacagttaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 30409402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 597
Target Start/End: Original strand, 9780486 - 9780581
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct---atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattaca 597  Q
    |||||||  ||||||  ||||||||||||   |||||||| ||||| ||||||||||||||||||| ||  ||||| ||| ||| |||||||||||    
T  9780486 atttgagataatttcggtttaccccttctgccatatcatcgattttctacagtcaaaattcatgaaggtccaaaaccaaataatcttcaaattaca 9780581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 601
Target Start/End: Original strand, 26040743 - 26040804
Alignment:
Q  541 tcaattttgtacagtcaaaattcatgaaagtttaaaac-taaaaatattcaaattacaagga 601  Q
    |||||||||||| ||||||||||||||| ||  |||||  |||||| |||||||||||||||    
T  26040743 tcaattttgtacggtcaaaattcatgaaggtccaaaacaaaaaaatcttcaaattacaagga 26040804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Complemental strand, 46088192 - 46088159
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaa 568  Q
    |||||||| |||||||||||||||||||||||||    
T  46088192 atatcatcgattttgtacagtcaaaattcatgaa 46088159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 609
Target Start/End: Complemental strand, 49533210 - 49533134
Alignment:
Q  533 ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaa-ctaaaaatattcaaattacaaggatgcaatct 609  Q
    ||||||||||||||||||||| |||||||| ||||||||  ||||   |||||| |||||||||||||| || |||||    
T  49533210 ctatatcatcaattttgtacattcaaaatt-atgaaagtccaaaatgaaaaaatcttcaaattacaaggttgaaatct 49533134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 14187794 - 14187890
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | ||||||| ||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||    
T  14187794 atttgagcaaatttcggtttaccccctgctatatcttcaattttgtacagtcaaaattcattaaggtctaaaaccaaaaatattcaaattacaagga 14187890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 12005464 - 12005560
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| | | ||||| || ||||||||||||||||||||||||||||  ||||| |||||| ||||| |||||||||    
T  12005464 atttgagcaaatttcaatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaagtccaaaacaaaaaatcttcaagttacaagga 12005560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 17155781 - 17155686
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||||||| ||||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||| ||||||    
T  17155781 atttgagcaaatttcggtttacccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattgcaagga 17155686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 442709 - 442613
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| ||||| |||||||||    
T  442709 atttgagcaaatttcaatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaacaaaaaatcttcaagttacaagga 442613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 20055021 - 20055117
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||  | | ||||| |||||||||||||||||||||||||||||||  ||||| |||||| |||||||||||||||    
T  20055021 atttgagcaaatttcggtttaccctctgtcatatcttcaattttgtacagtcaaaattcatgaaagtccaaaaccaaaaatcttcaaattacaagga 20055117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 30632171 - 30632076
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||| |||||||  ||||||||| | ||||| |||||||||| ||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  30632171 atttgagtaaatttcggtttacccctgccatatcttcaattttgtgcagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 30632076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 20164304 - 20164401
Alignment:
Q  506 atttgagcaaatttcaatttacccc--ttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||||||  | ||||||| || |||||||||||||||||||||| || ||  ||||| ||||||||||||||||||||||    
T  20164304 atttgagcaaatttcggtttacccccctgctatatcttcgattttgtacagtcaaaattcattaaggtccaaaaccaaaaatattcaaattacaagga 20164401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 31749494 - 31749398
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| ||||||||| | | |||||||| |||||||| |||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  31749494 atttgagcaaatttcgatttaccccctgccatatcatcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 31749398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 31863911 - 31864007
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||||| | |||||||| ||||||||||||||| ||||||||| ||  ||||| |||||  |||||||||||||||    
T  31863911 atttgagcaaatttcggtttaccccttgtcatatcatcgattttgtacagtcaagattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 31864007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 47370327 - 47370231
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||  |||||| ||||| |||||||||    
T  47370327 atttgagcaaatttcaatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaataaaaaatcttcaagttacaagga 47370231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 506 - 603
Target Start/End: Original strand, 11576771 - 11576869
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||||||||||  |||||||| | | ||||| || |||| |||||||||||||||||||| ||  ||||| |||||| |||||||||||||||||    
T  11576771 atttgagcaaatttcggtttaccccctgccatatcttcgatttcgtacagtcaaaattcatgaaggtccaaaacaaaaaatcttcaaattacaaggatg 11576869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 2514113 - 2514209
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||| ||||||||  ||||||| || |||||||||| ||||||||||||||||||||| ||| ||  ||||  |||||| |||||||||||||||    
T  2514113 atttgaacaaatttcggtttaccctctgctatatcatcgattttgtacagtcaaaattcacgaaggtccaaaatcaaaaatcttcaaattacaagga 2514209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 603
Target Start/End: Complemental strand, 8391138 - 8391039
Alignment:
Q  506 atttgagcaaatttcaatttac--cccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||||||||||  |||||  |||| | |||||||| ||||||||||||||||||||||||| ||  ||||  |||||| | |||||||||||||||    
T  8391138 atttgagcaaatttcggtttacgaccctgccatatcatctattttgtacagtcaaaattcatgaaggtccaaaatcaaaaatctacaaattacaaggatg 8391039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 534 - 597
Target Start/End: Original strand, 25601920 - 25601984
Alignment:
Q  534 tatatcatcaattttgtacagtcaaaattcatgaaagtttaaaa-ctaaaaatattcaaattaca 597  Q
    |||||||||||| |||||||||||||||||||||| |||||||| | |||||| |||||||||||    
T  25601920 tatatcatcaatattgtacagtcaaaattcatgaatgtttaaaaccgaaaaatcttcaaattaca 25601984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 31308025 - 31307929
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||| |||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  31308025 atttgagcaaatttcggtttgccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaacaaaaaatcttcaaattacaagga 31307929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 32199962 - 32200058
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | |||||||| |||||||||||||||| |||||||| ||  |||| ||||||  |||||||||||||||    
T  32199962 atttgagcaaatttcggtttaccccctaccatatcatcgattttgtacagtcaaagttcatgaaggtccaaaattaaaaaacttcaaattacaagga 32200058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 43707127 - 43707223
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||  ||||||||| | ||||| |  ||||||||||||||||||||||||| |   ||||| |||||| |||||||||||||||    
T  43707127 atttgagcaaatttcagcttaccccttgtcatatctttgattttgtacagtcaaaattcatgaagggccaaaaccaaaaatcttcaaattacaagga 43707223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 603
Target Start/End: Complemental strand, 17051991 - 17051892
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaa-ctaaaaatattcaaattacaaggatg 603  Q
    ||||||||||||||   |||||||| | | ||||| || ||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||||    
T  17051991 atttgagcaaattttggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaatcaaaaaatattcaaattacaaggatg 17051892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 35158356 - 35158261
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||||||  | ||||| || |||||||| |||||||||||||||| ||  ||||  |||||| |||||||||||||||    
T  35158356 atttgagcaaatttcggtttacccccgccatatcttcgattttgtatagtcaaaattcatgaaggtccaaaatcaaaaatcttcaaattacaagga 35158261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 1853246 - 1853184
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||    
T  1853246 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattaca 1853184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 5864676 - 5864742
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  5864676 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 5864742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 26254788 - 26254854
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  26254788 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 26254854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 598
Target Start/End: Complemental strand, 13264043 - 13263950
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    ||||||||||||||  ||||||||| |   ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| ||||||||||||    
T  13264043 atttgagcaaatttagatttaccccctgacatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaa 13263950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 21444066 - 21444162
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   |||||||| | | ||||| |||||||||||| ||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  21444066 atttgagcaaattttggtttaccccctgtcatatcttcaattttgtactgtcaaaattcatgaaggtccaaaacaaaaaaacttcaaattacaagga 21444162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 31750894 - 31750798
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || |||||||||||||||||||||||||  |  ||||  |||||| |||||||||||||||    
T  31750894 atttgagcaaatttcggtttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaagatccaaaataaaaaattttcaaattacaagga 31750798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 603
Target Start/End: Original strand, 33441095 - 33441163
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||| |||||||||| |||||||||||||| ||  ||||| | |||| |||||||||||||||||    
T  33441095 atatcatctattttgtacaatcaaaattcatgaaggtccaaaaccagaaatcttcaaattacaaggatg 33441163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 21521999 - 21522066
Alignment:
Q  534 tatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||| || ||||||||||||||||||||||||| ||  ||||| |||||| ||||| |||||||||    
T  21521999 tatatcttcgattttgtacagtcaaaattcatgaaggtccaaaacaaaaaatcttcaagttacaagga 21522066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 2300966 - 2300900
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||  || ||| |||||||||||||||    
T  2300966 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaatcaagaatcttcaaattacaagga 2300900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 3401946 - 3401880
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  3401946 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 3401880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 599
Target Start/End: Complemental strand, 10975700 - 10975606
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    |||||||||||||||  |||||||| | | |||||||| ||||||||| |||||| |||||||||||  ||||| |||||| ||| || ||||||    
T  10975700 atttgagcaaatttcggtttaccccctatcatatcatcgattttgtactgtcaaagttcatgaaagtcgaaaaccaaaaatcttctaaatacaag 10975606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 32946430 - 32946364
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| |||||||||||| |||||||||||| ||  ||||| |||||  |||||||||||||||    
T  32946430 atatcatcgattttgtacagttaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 32946364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 34258337 - 34258403
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| |||||||||||||||||||||||||  | |||||| |||||  ||||||||| |||||    
T  34258337 atatcatcgattttgtacagtcaaaattcatgaagatctaaaacaaaaaaacttcaaattaaaagga 34258403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 535 - 608
Target Start/End: Original strand, 2240652 - 2240725
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatc 608  Q
    |||||||| ||||||||| ||||||||||||||| ||  ||||| |||||  ||||||||||| ||||| ||||    
T  2240652 atatcatcgattttgtaccgtcaaaattcatgaaggtccaaaaccaaaaaatttcaaattacagggatggaatc 2240725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 535 - 608
Target Start/End: Original strand, 2241086 - 2241159
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatc 608  Q
    |||| ||| ||||||||| ||||||||||||||| ||  ||||| |||||  ||||||||||||||||| ||||    
T  2241086 atattatcgattttgtacggtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaaggatggaatc 2241159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 603
Target Start/End: Original strand, 7967752 - 7967820
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||  ||||||||||||  |||||||| |||||| ||||||| |||| || ||||||||||||||    
T  7967752 atatcatagattttgtacagttgaaattcataaaagttcaaaactagaaatctttaaattacaaggatg 7967820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 603
Target Start/End: Complemental strand, 18828775 - 18828676
Alignment:
Q  506 atttgagcaaatttcaatttac--cccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    ||||||||||||||| ||||||  |||| | |||||||| |||||||| ||| |||||| ||||| ||  ||||| | |||| || ||||||||||||||    
T  18828775 atttgagcaaatttcgatttacttccctaccatatcatctattttgtatagtgaaaatttatgaaggtccaaaaccagaaatctttaaattacaaggatg 18828676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 557
Target Start/End: Complemental strand, 19093247 - 19093196
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtca 557  Q
    ||||||| |||||||| ||||||||| | |||||||| ||||||||||||||    
T  19093247 atttgagaaaatttcagtttacccctaccatatcatcgattttgtacagtca 19093196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 544 - 599
Target Start/End: Original strand, 21022598 - 21022653
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||    
T  21022598 attttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaag 21022653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 609
Target Start/End: Original strand, 45687812 - 45687887
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattacaaggatgcaatct 609  Q
    |||||||| ||||||||| ||||||||||||||| || |||||| ||| ||| ||||||||| |||| || |||||    
T  45687812 atatcatcgattttgtacggtcaaaattcatgaaggtctaaaacgaaataatcttcaaattataaggttgaaatct 45687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 10067929 - 10067832
Alignment:
Q  506 atttgagcaaatttcaatttac--cccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||  |||| | |||||||| ||||||||| ||||||||| ||||| ||  ||||  |||||  |||||||||||||||    
T  10067929 atttgagcaaatttcggtttactcccctgccatatcatcgattttgtacggtcaaaatttatgaaggtccaaaataaaaaaacttcaaattacaagga 10067832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 10932036 - 10931974
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||| |||||||||| |||||||||||||| ||  ||||| |||| | |||||||||||    
T  10932036 atatcatcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaattcttcaaattaca 10931974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 27484900 - 27484838
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||| |||||||||||||||||||||||||||  |  ||||  |||||| |||||||||||    
T  27484900 atatcaccaattttgtacagtcaaaattcatgaagatccaaaatcaaaaatcttcaaattaca 27484838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 609
Target Start/End: Original strand, 37913884 - 37913958
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatct 609  Q
    |||||||| |||||||| ||||||||||||||||  |  ||||| ||| || |||||| |||||||||| |||||    
T  37913884 atatcatcgattttgtaaagtcaaaattcatgaagatccaaaaccaaatatcttcaaactacaaggatgaaatct 37913958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 38192794 - 38192860
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||  ||||||||| ||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  38192794 atatcattgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 38192860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 597
Target Start/End: Original strand, 42957572 - 42957642
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    ||||| |||||||||  |||||||||| ||||| |||||||| ||  ||||| |||||| |||||||||||    
T  42957572 cccctgctatatcattgattttgtacaatcaaagttcatgaaggtcgaaaaccaaaaatcttcaaattaca 42957642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 597
Target Start/End: Complemental strand, 43393860 - 43393790
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    ||||||| ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| || ||||||||    
T  43393860 ccccttccatatcgtcgattttgtacggtcaaaattcatgaatgtcaaaaaccaaaaatctttaaattaca 43393790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 598
Target Start/End: Complemental strand, 24233471 - 24233378
Alignment:
Q  506 atttgagcaaatttcaatttac-cccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    ||||||| |||||||| ||||| |||  | |||||||| ||||| || |||||||||||||||| || |||||| |||||  ||||| ||||||    
T  24233471 atttgagtaaatttcagtttacaccccaccatatcatcgattttatatagtcaaaattcatgaaggtctaaaaccaaaaaatttcaagttacaa 24233378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 36374281 - 36374224
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||  |||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  36374281 attttgtactatcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 36374224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 40938251 - 40938194
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||| ||||||||||||||| || |||||| |||||| || |||||| |||||    
T  40938251 attttgtactgtcaaaattcatgaaggtctaaaaccaaaaatctttaaattataagga 40938194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 2624772 - 2624867
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||| |||| ||  | | ||||| || |||||||||| |||||||||||||| ||  ||||| |||||| |||||| ||||||||    
T  2624772 atttgagcaaatttcagtttatcctctgtcatatcttcgattttgtacaatcaaaattcatgaaggtacaaaaccaaaaat-ttcaaagtacaagga 2624867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 15721104 - 15721008
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   |||||||| | | ||||| || ||||||| | ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  15721104 atttgagcaaatttatgtttaccccctatcatatcttcgattttgtgctgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 15721008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 600
Target Start/End: Original strand, 25571176 - 25571232
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagg 600  Q
    ||||||||| ||||||||||| ||| ||  ||||| |||||| ||||||||||||||    
T  25571176 attttgtactgtcaaaattcacgaatgtccaaaaccaaaaatcttcaaattacaagg 25571232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 874528 - 874432
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| |||||||||   ||||||| || ||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||    
T  874528 atttgagcaaatttcgatttacccccggctatatcttcgattttgtacagtcaaaattcatgaaggtctaaaaccaaaaatattcaaattacaagga 874432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 38127936 - 38127841
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||||||| | ||||| |||||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  38127936 atttgagcaaatttcggtttacccctgccatatcttcaattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 38127841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 43830702 - 43830799
Alignment:
Q  506 atttgagcaaatttcaatttacccc--ttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| |||||||||  |  |||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  43830702 atttgagcaaatttcgatttacccccctgttatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 43830799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 1975683 - 1975779
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  |||||||| | ||||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  1975683 attttagcaaatttcggtttaccccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 1975779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 19272836 - 19272740
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||| |||||||| | | ||||| |||||||| ||||||||||||||||||| || |||||| |||||| ||||||||| |||||    
T  19272836 atttgagcaaatttcagtttaccccctgccatatcttcaattttttacagtcaaaattcatgaaggtctaaaaccaaaaatcttcaaattataagga 19272740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 42794186 - 42794090
Alignment:
Q  506 atttgagcaaatttcaatttaccccttc-tatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||| |||||||| |||||||| |  |||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  42794186 atttgagaaaatttcagtttaccccctggtatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 42794090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 18048969 - 18048895
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| ||||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  18048969 cccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 18048895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 603
Target Start/End: Complemental strand, 30497325 - 30497227
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||| ||||||||||| |||||||| | | |||||||| |||||||||| |||||||||||||| || |||||| | |||| |||||||||||||||||    
T  30497325 atttaagcaaatttcagtttaccccctgccatatcatctattttgtacattcaaaattcatgaaggtctaaaaccagaaatcttcaaattacaaggatg 30497227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 9419700 - 9419796
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| |||||| || | | ||||| || ||||||||||||||||||||||||||||  ||||| |||||| ||||| |||||||||    
T  9419700 atttgagcaaatttcgatttactccctgtcatatcttcgattttgtacagtcaaaattcatgaaagtccaaaacaaaaaatcttcaagttacaagga 9419796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 36525420 - 36525354
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||||||||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  36525420 atatcatcaattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 36525354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 535 - 608
Target Start/End: Complemental strand, 29949700 - 29949627
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatc 608  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||| |||||  ||||||||||||||||| ||||    
T  29949700 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaaggatggaatc 29949627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 509 - 609
Target Start/End: Complemental strand, 31989525 - 31989424
Alignment:
Q  509 tgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattacaaggatgcaat 607  Q
    ||||||||||||| ||||||||| | |||||||| ||||||||| |||| |||||||||| ||  ||||| ||| | | ||||||||||||||||| |||    
T  31989525 tgagcaaatttcagtttacccctgccatatcatcgattttgtacggtcataattcatgaaggtcgaaaaccaaagattcttcaaattacaaggatggaat 31989426  T
Q  608 ct 609  Q
    ||    
T  31989425 ct 31989424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 18756550 - 18756646
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| || ||||||||||||    
T  18756550 atttgagcaaatttcggtttaccccatgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatctttaaattacaagga 18756646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 608
Target Start/End: Original strand, 25103935 - 25104039
Alignment:
Q  506 atttgagcaaatttcaatttacccc--ttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||||||||||  ||||||||  | | ||||| |  ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||||||    
T  25103935 atttgagcaaatttcggtttacccccctgccatatctttgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaaggatg 25104034  T
Q  604 caatc 608  Q
     ||||    
T  25104035 aaatc 25104039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 609
Target Start/End: Complemental strand, 31377724 - 31377619
Alignment:
Q  506 atttgagcaaatttcaattta-ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattacaaggatg 603  Q
    ||||||||||||||   |||| ||||| | |||||||| ||||||||| ||||||||||||||||||| ||||| ||| ||| |||||| | ||||||||    
T  31377724 atttgagcaaattttggtttaacccctgccatatcatcgattttgtacggtcaaaattcatgaaagttcaaaacaaaagaatcttcaaacttcaaggatg 31377625  T
Q  604 caatct 609  Q
     |||||    
T  31377624 gaatct 31377619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 15543914 - 15544010
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  15543914 atttgagcaaatttcggtttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 15544010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 28781822 - 28781918
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | |||| ||| ||||||||| ||||||||||||||| || |||||| ||||   |||||||||||||||    
T  28781822 atttgagcaaatttcggtttaccccctgccatattatcgattttgtacggtcaaaattcatgaaggtctaaaaccaaaatacttcaaattacaagga 28781918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 33218526 - 33218622
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| |  ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  33218526 atttgagcaaatttcggtttaccccctgccatatctttcattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 33218622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 38950031 - 38949935
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||| ||||||| ||||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  38950031 atttgagaaaatttcgatttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 38949935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 609
Target Start/End: Original strand, 29878910 - 29878985
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattacaaggatgcaatct 609  Q
    ||||||||||||||||||| ||||||||||| || || |||||| ||| ||| |||||||||||| |||| |||||    
T  29878910 atatcatcaattttgtacaatcaaaattcataaaggtctaaaaccaaagaatcttcaaattacaatgatggaatct 29878985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 2526496 - 2526430
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| |||||||| |||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  2526496 atatcatcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 2526430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 7008004 - 7008070
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| ||||| ||||||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  7008004 atatcatcgattttatacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 7008070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 7318236 - 7318170
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  7318236 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 7318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 16590624 - 16590530
Alignment:
Q  505 tatttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaa-ctaaaaatattcaaattaca 597  Q
    ||||||||  |||||| ||||||||| | |||||||||| |||||||||| |||||||||||||| ||  |||| | |||||| |||||||||||    
T  16590624 tatttgagagaatttcgatttaccccctactatatcatcgattttgtacaatcaaaattcatgaaggtgcaaaaccaaaaaatcttcaaattaca 16590530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 603
Target Start/End: Original strand, 26498711 - 26498809
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    ||||||| |||||||  |||||||| | | |||||||| |||||||  |||||||||||||||| ||  ||||| |||||  |||||||||||||||||    
T  26498711 atttgagaaaatttcggtttaccccctgccatatcatcgattttgtctagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaaggatg 26498809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 39373169 - 39373072
Alignment:
Q  506 atttgagcaaatttcaatttaccc--cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||  || | ||||  || ||||||| ||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  39373169 atttgagcaaatttcggtttaccctcctgccatatattcgattttgtccagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 39373072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 527 - 597
Target Start/End: Complemental strand, 41906143 - 41906073
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    ||||||| ||||| || ||||||||||||||||||||||||| ||  ||||| ||| || |||||||||||    
T  41906143 ccccttccatatcgtcgattttgtacagtcaaaattcatgaaggtcgaaaaccaaatatcttcaaattaca 41906073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 19253535 - 19253478
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| ||  ||||| |||||| ||||| |||||||||    
T  19253535 attttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaacttacaagga 19253478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 608
Target Start/End: Complemental strand, 29884091 - 29883987
Alignment:
Q  506 atttgagcaaatttcaatttacc--ccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    ||||||| |||||||  ||||||  ||||| |||||||| ||||||||||| ||||||||||||| ||   |||| |||||  |||||||||| ||||||    
T  29884091 atttgagaaaatttcggtttacctcccttccatatcatcgattttgtacagccaaaattcatgaaggtcctaaaccaaaaaacttcaaattacgaggatg 29883992  T
Q  604 caatc 608  Q
     ||||    
T  29883991 gaatc 29883987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 34831627 - 34831570
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| |   ||||| |||||| |||||||||||||||    
T  34831627 attttgtacagtcaaaattcatgaagggccaaaaccaaaaatcttcaaattacaagga 34831570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 598
Target Start/End: Complemental strand, 23381304 - 23381241
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    |||||||| ||||||| ||||||||||||||||||||  ||||  |||||  ||||||||||||    
T  23381304 atatcatcgattttgtgcagtcaaaattcatgaaagtccaaaataaaaaagcttcaaattacaa 23381241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 29096891 - 29096825
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| |||||||||| |||||||||||||| ||  ||||  |||||  |||||||||||||||    
T  29096891 atatcatctattttgtacaatcaaaattcatgaaggtccaaaatcaaaaaacttcaaattacaagga 29096825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 42223169 - 42223107
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||| |||||||||||||||||||||||||  |  ||||| |||| | |||||||||||    
T  42223169 atatcatcgattttgtacagtcaaaattcatgaagatccaaaaccaaaattcttcaaattaca 42223107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 599
Target Start/End: Original strand, 15580598 - 15580663
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaa-ctaaaaatattcaaattacaag 599  Q
    |||||||| ||||||||| ||||||||||||||| ||  |||| | |||||| |||||||||||||    
T  15580598 atatcatcgattttgtacggtcaaaattcatgaaggtccaaaatcaaaaaatcttcaaattacaag 15580663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 16303861 - 16303918
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||  |||||||||||||||||  ||||| |||| | |||||||||||||||    
T  16303861 attttgtactctcaaaattcatgaaagtccaaaaccaaaattcttcaaattacaagga 16303918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 17188860 - 17188917
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||| ||||||||||||||| ||  ||||| |||||| |||||| ||||||||    
T  17188860 attttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaactacaagga 17188917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 600
Target Start/End: Original strand, 17886646 - 17886711
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagg 600  Q
    |||||||| |||||||||||||||| ||||||||  |  ||||| |||||  ||||||||||||||    
T  17886646 atatcatcgattttgtacagtcaaagttcatgaagatccaaaaccaaaaaacttcaaattacaagg 17886711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Complemental strand, 35791140 - 35791107
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaa 568  Q
    |||||||| |||||||||||||||||||||||||    
T  35791140 atatcatcgattttgtacagtcaaaattcatgaa 35791107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 776475 - 776571
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   |||||| ||| | ||||| || ||||||||| ||||||||||||||| ||  ||||  || ||| |||||||||||||||    
T  776475 atttgagcaaattttggtttacctcttaccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaatcaacaatcttcaaattacaagga 776571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 18755225 - 18755321
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   |||||||| | | ||||| || |||||||||||| |||||||||||| ||  ||||| | || | |||||||||||||||    
T  18755225 atttgagcaaattttggtttaccccatgccatatcttcgattttgtacagttaaaattcatgaaggtccaaaaccataagtcttcaaattacaagga 18755321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 4e-21; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 13439765 - 13439861
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  13439765 atttgagcaaatttcaatttaccccctgctatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 13439861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 14004468 - 14004568
Alignment:
Q  509 tgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaat 607  Q
    ||||||||||||  |||||||| | ||||||| || ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||    
T  14004468 tgagcaaatttcggtttaccccctgctatatcttcgattttgtactgtcaaaattcatgaaagttcaaaaccaaaaattttcaaattacaaggatgaaat 14004567  T
Q  608 c 608  Q
    |    
T  14004568 c 14004568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 2985698 - 2985794
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||| || || | |||||||| ||||||||||||||||||||||||| || |||||| |||||  |||||||||||||||    
T  2985698 atttgagcaaatttcggtttatcctctgccatatcatcgattttgtacagtcaaaattcatgaaggtctaaaaccaaaaaacttcaaattacaagga 2985794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 13049641 - 13049737
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  13049641 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 13049737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 32721708 - 32721804
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| ||||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| ||||| |||||||||    
T  32721708 atttgagcaaatttcgatttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaacaaaaaatcttcaagttacaagga 32721804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 600
Target Start/End: Complemental strand, 45007998 - 45007942
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagg 600  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  45007998 attttgtacggtcaaaattcatgaaggttcaaaactaaaaatattcaaattacaagg 45007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 52839500 - 52839596
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  52839500 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 52839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 600
Target Start/End: Original strand, 14220569 - 14220664
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagg 600  Q
    |||| ||||||||||| |||||||| | ||||||| || ||||||||||||||||||| ||||| ||  ||||| ||||||||| |||||||||||    
T  14220569 attttagcaaatttcagtttaccccctgctatatcttcgattttgtacagtcaaaatttatgaaggtccaaaaccaaaaatattaaaattacaagg 14220664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 600
Target Start/End: Original strand, 14224796 - 14224891
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagg 600  Q
    |||| ||||||||||| |||||||| | ||||||| || ||||||||||||||||||| ||||| ||  ||||| ||||||||| |||||||||||    
T  14224796 attttagcaaatttcagtttaccccctgctatatcttcgattttgtacagtcaaaatttatgaaggtccaaaaccaaaaatattaaaattacaagg 14224891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 25124979 - 25125061
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatct 609  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||  ||||| |||||| ||||||||| | ||||| |||||    
T  25124979 ccccttccatatcatcgattttgtacagtcaaaattcatgaaggtcaaaaaccaaaaatcttcaaattatagggatgaaatct 25125061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 13041564 - 13041660
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||| |||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  13041564 atttgagcaaatttcggttttccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 13041660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 28298186 - 28298262
Alignment:
Q  534 tatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattacaaggatgcaatct 609  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||| |||  |||||||||||||||| |||||    
T  28298186 tatatcatcgattttgtacagtcaaaattcatgaagatctaaaactaaataatcatcaaattacaaggatgaaatct 28298262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 31293653 - 31293749
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||| |||||||  |||||||| ||  |||||||| ||||||||||||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  31293653 atttgagaaaatttcggtttaccccctcccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 31293749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 609
Target Start/End: Original strand, 54571294 - 54571398
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgc 604  Q
    ||||||| |||||||  |||||||| | |||||||||| ||| ||||||||||||||| ||||| ||| ||||| |||||  |||||| ||||||||||     
T  54571294 atttgagaaaatttccgtttaccccctgctatatcatcgattctgtacagtcaaaatttatgaaggttcaaaacaaaaaaacttcaaactacaaggatga 54571393  T
Q  605 aatct 609  Q
    |||||    
T  54571394 aatct 54571398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 600
Target Start/End: Complemental strand, 7272734 - 7272639
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagg 600  Q
    ||||||| |||||||| |||||||| | | |||||||| |||||||||||||| ||||||||||  | |||||| |||||  ||||||||||||||    
T  7272734 atttgaggaaatttcagtttaccccctgccatatcatcgattttgtacagtcacaattcatgaagatctaaaaccaaaaaacttcaaattacaagg 7272639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 14870132 - 14870227
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   ||||||| | | ||||| || |||||||||||||||||||||| || ||  ||||| |||||| |||||||||||||||    
T  14870132 atttgagcaaattttgctttacccttgccatatcttcgattttgtacagtcaaaattcataaaggtccaaaacgaaaaatcttcaaattacaagga 14870227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 19111142 - 19111237
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||| ||||   ||||| || ||||| ||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  19111142 atttgagcaaatttcggtttatccctgtcatatcttcgattttatacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 19111237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 523 - 597
Target Start/End: Complemental strand, 25158946 - 25158871
Alignment:
Q  523 tttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||||| | |||||||| ||||||||||||||||||||||||| ||  ||||| || |||||||||||||||    
T  25158946 tttaccccttgccatatcatcgattttgtacagtcaaaattcatgaatgtccaaaaccaagaatattcaaattaca 25158871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 609
Target Start/End: Complemental strand, 17030673 - 17030599
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatct 609  Q
    |||||||  ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||| || |||||    
T  17030673 atatcattgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaaggttggaatct 17030599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 5572154 - 5572250
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||  |||||| |||||||||||||||    
T  5572154 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaatcaaaaatcttcaaattacaagga 5572250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 22818056 - 22817960
Alignment:
Q  506 atttgagcaaatttcaatttacc-ccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   |||||| ||| | ||||| || |||||||| |||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  22818056 atttgagcaaattttggtttacctcctgccatatcttcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 22817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 34314845 - 34314782
Alignment:
Q  506 atttgagcaaatttcaatttac-cccttctatatcatcaattttgtacagtcaaaattcatgaa 568  Q
    ||||||||||||||| | |||| |||| | |||||||| |||||||||||||||||||||||||    
T  34314845 atttgagcaaatttcgacttactccctgccatatcatcgattttgtacagtcaaaattcatgaa 34314782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 22447046 - 22447112
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||| |||||||||||||||| |||||| | ||  |||||||||||| |||||||||||||||    
T  22447046 atataatcgattttgtacagtcaaagttcatgtatgtcgaaaactaaaaatcttcaaattacaagga 22447112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 603
Target Start/End: Complemental strand, 30226274 - 30226176
Alignment:
Q  507 tttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattacaaggatg 603  Q
    ||||||||||||| | |||||||| | | |||||||||||||||||| |||||||||||| ||  |  ||||| ||| ||| |||||||||||||||||    
T  30226274 tttgagcaaattttagtttaccccctgtcatatcatcaattttgtaccgtcaaaattcataaagatccaaaaccaaataatcttcaaattacaaggatg 30226176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 597
Target Start/End: Original strand, 31073888 - 31073950
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    ||||| ||||||||||||| |||||||||||||| ||  ||||| |||||| |||||||||||    
T  31073888 atatcttcaattttgtacattcaaaattcatgaaggtccaaaaccaaaaatcttcaaattaca 31073950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 4658711 - 4658768
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||| ||||||||||||||| ||| ||| ||| |||| |||||||||||||||    
T  4658711 attttgtactgtcaaaattcatgaaggttcaaacctagaaatcttcaaattacaagga 4658768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 7226246 - 7226147
Alignment:
Q  506 atttgagcaaatttcaatttacccc--ttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaata--ttcaaattacaagga 601  Q
    |||||||||||||||  ||||||||  | | |||||||| |||||||||| |||||||||||||| ||  ||||| ||||| |  |||||||||||||||    
T  7226246 atttgagcaaatttcggtttacccccctgccatatcatcgattttgtacattcaaaattcatgaaggtccaaaaccaaaaaaaacttcaaattacaagga 7226147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 16897328 - 16897385
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||||||||| || ||  ||||| |||||| |||||||||||||||    
T  16897328 attttgtacagtcaaaattcataaaggtcaaaaaccaaaaatcttcaaattacaagga 16897385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 609
Target Start/End: Complemental strand, 37050186 - 37050084
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgc 604  Q
    ||||||||||||||| |||||||  || | || ||||| ||||| ||  ||||||||||||||| || |||||  |||||| |||||||||||||||||     
T  37050186 atttgagcaaatttcgatttaccttctaccatgtcatcgattttata--gtcaaaattcatgaaggtctaaaataaaaaatcttcaaattacaaggatgg 37050089  T
Q  605 aatct 609  Q
    |||||    
T  37050088 aatct 37050084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 300342 - 300246
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   |||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  300342 atttgagcaaattttggtttaccccctatgatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 300246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 597
Target Start/End: Complemental strand, 28735617 - 28735525
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||||||||||  ||||| || | | ||||| || ||||||||||| ||||||||||||| ||  ||||| |||||| |||||||||||    
T  28735617 atttgagcaaatttcggtttactccctgtcatatcttcgattttgtacagccaaaattcatgaaggtccaaaaccaaaaatcttcaaattaca 28735525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 598
Target Start/End: Complemental strand, 52962375 - 52962312
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    ||||| || ||||||||||||||||||||||||| ||  ||||| |||||  ||||||||||||    
T  52962375 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaatttcaaattacaa 52962312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 26770151 - 26770217
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||  ||||| | |||| |||||||||||||||    
T  26770151 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccagaaatcttcaaattacaagga 26770217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Complemental strand, 25159001 - 25158968
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaa 568  Q
    |||| |||||||||||||||||||||||||||||    
T  25159001 atattatcaattttgtacagtcaaaattcatgaa 25158968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 535 - 595
Target Start/End: Original strand, 22438832 - 22438892
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaatta 595  Q
    |||| ||| |||||||||||||||| |||||| | ||  |||||||||||| |||||||||    
T  22438832 atataatcgattttgtacagtcaaagttcatgtatgtccaaaactaaaaatcttcaaatta 22438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 26399055 - 26399153
Alignment:
Q  506 atttgagcaaatttcaatttacccc---ttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||||||   | ||||||| |||||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  26399055 atttgagcaaatttcggtttaccccccatgctatatcttcaattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 26399153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 506 - 599
Target Start/End: Original strand, 20158851 - 20158944
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    ||||||||||||||   ||||||||| ||||||| || ||||||||| ||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  20158851 atttgagcaaattttggtttacccctgctatatcttcgattttgtacggtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaag 20158944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 5457255 - 5457159
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||| |||||||| | ||||||| || |||||||||| |||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  5457255 attttagcaaatttcagtttaccccctgctatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 5457159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 9209727 - 9209653
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| ||||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  9209727 cccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 9209653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 26190905 - 26190809
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  26190905 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 26190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 5932136 - 5932040
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||| ||||||||||| ||  ||||| |||||| |||||||||||||||    
T  5932136 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcgaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 5932040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 21770929 - 21770833
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||||| || | ||||| || ||||||||||||||||||||||||| |   ||||| |||||| |||||||||||||||    
T  21770929 atttgagcaaatttcggtttaccctctgccatatcttcgattttgtacagtcaaaattcatgaaggcacaaaaccaaaaatcttcaaattacaagga 21770833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 598
Target Start/End: Complemental strand, 13436994 - 13436931
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    |||||||| |||||||||| |||||||||||||| || |||||| |||||| ||||||||||||    
T  13436994 atatcatcgattttgtacaatcaaaattcatgaaggtctaaaacaaaaaatcttcaaattacaa 13436931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 23161999 - 23161904
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   ||||||||| | ||||| || ||||||||| ||||||||||||||| ||  ||||  |||||| |||||||||||||||    
T  23161999 atttgagcaaattttggtttacccctgccatatcttcgattttgtaccgtcaaaattcatgaaggtccaaaatcaaaaatcttcaaattacaagga 23161904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 598
Target Start/End: Original strand, 25060020 - 25060083
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    |||||||  |||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||    
T  25060020 atatcattgattttgtacaatcaaaattcatgaaggttcaaaactaaaaatcttcaaattacaa 25060083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 6284378 - 6284475
Alignment:
Q  506 atttgagcaaatttcaatttac--cccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||  | || ||||||| || ||||||| ||||||||||||||||| ||  ||||  ||||||||||||||||||||||    
T  6284378 atttgagcaaatttcggtttacaactctgctatatcttcgattttgtgcagtcaaaattcatgaaggtccaaaatcaaaaatattcaaattacaagga 6284475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 583
Target Start/End: Complemental strand, 24023213 - 24023136
Alignment:
Q  507 tttgagcaaatttcaattta-ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaa 583  Q
    ||||||| |||||| ||||| ||||| |||||||| |||||||||||| ||||||||||| ||||| |||||| ||||    
T  24023213 tttgagcgaatttcgatttatcccctactatatcagcaattttgtacactcaaaattcataaaagtctaaaaccaaaa 24023136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 14909959 - 14910055
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||| |||||||| |||||||| | | |||||||| |||||||||||| |||||||||||| ||  ||||  |||||  |||||||||||||||    
T  14909959 atttgagaaaatttcagtttaccccctgccatatcatcgattttgtacagttaaaattcatgaaggtccaaaagcaaaaaacttcaaattacaagga 14910055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 585
Target Start/End: Original strand, 22152047 - 22152127
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaat 585  Q
    |||| ||||||||||| ||||||| || | |||||||| |||||||||||||||||||||| || ||  ||||||||||||    
T  22152047 atttaagcaaatttcagtttaccctctaccatatcatcgattttgtacagtcaaaattcataaaggtgcaaaactaaaaat 22152127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 41189981 - 41189915
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| ||||||||| |||||||| |||||| || |||||| | |||| |||||||||||||||    
T  41189981 atatcatcgattttgtaccgtcaaaatccatgaaggtctaaaaccataaatcttcaaattacaagga 41189915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 47980004 - 47980061
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||| ||||||||| |||||  |||||||| |||||| |||||||||||||||    
T  47980004 attttgtacggtcaaaatttatgaagatttaaaacaaaaaatcttcaaattacaagga 47980061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 603
Target Start/End: Complemental strand, 16421057 - 16420989
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    ||||| || ||||||||| |||||||||||| || ||  ||||||| |||| |||||||||||||||||    
T  16421057 atatcgtcgattttgtactgtcaaaattcataaaggtccaaaactagaaatcttcaaattacaaggatg 16420989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 27666091 - 27665995
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||| ||| || |||||||||||| ||  ||||| |||||| |||||||||||||||    
T  27666091 atttgagcaaatttcggtttaccccatgccatatcttcgattttctactgtaaaaattcatgaaggtcgaaaaccaaaaatcttcaaattacaagga 27665995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 44961180 - 44961084
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  ||||||| || | ||||| || |||||||||||||||||| |||||| ||  ||||  |||||| |||||||||||||||    
T  44961180 atttcagcaaatttcggtttaccctctaccatatcttcgattttgtacagtcaaaatccatgaaggtccaaaataaaaaatcttcaaattacaagga 44961084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 609
Target Start/End: Complemental strand, 5469456 - 5469361
Alignment:
Q  516 atttcaattta-cccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatct 609  Q
    ||||||||||| |||||| |||||||||| ||||||||  ||||||||| |||||  |  |||||||||||| ||||||||| |||| || |||||    
T  5469456 atttcaatttatccccttgctatatcatcgattttgtatggtcaaaattaatgaagatccaaaactaaaaatcttcaaattataaggttggaatct 5469361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 578
Target Start/End: Original strand, 26664192 - 26664235
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaac 578  Q
    |||||||||||||||||  |||||||||||||||||| ||||||    
T  26664192 atatcatcaattttgtatcgtcaaaattcatgaaagtgtaaaac 26664235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 33864196 - 33864133
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattaca 597  Q
    |||||||| |||||||||||||||||||||||||  || ||||| ||| ||| |||||||||||    
T  33864196 atatcatcgattttgtacagtcaaaattcatgaagattcaaaaccaaagaatcttcaaattaca 33864133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 597
Target Start/End: Original strand, 33916726 - 33916789
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaa-aatattcaaattaca 597  Q
    |||||||| |||||||||||||||||||||||||  || ||||| ||| ||| |||||||||||    
T  33916726 atatcatcgattttgtacagtcaaaattcatgaagattcaaaaccaaagaatcttcaaattaca 33916789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 601
Target Start/End: Complemental strand, 47231290 - 47231195
Alignment:
Q  507 tttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||| |||||||  |||||||| | | |||| ||| ||||||||| ||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  47231290 tttgagaaaatttcggtttaccccctgccatattatcgattttgtacggtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 47231195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 22387406 - 22387472
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || |||||||||||||||||||| |||| ||  ||||| |||||| || ||||||||||||    
T  22387406 atatcttcgattttgtacagtcaaaattcttgaaggtccaaaaccaaaaatctttaaattacaagga 22387472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 602
Target Start/End: Original strand, 45195632 - 45195690
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggat 602  Q
    |||||||||  |||||||||||||| ||| ||||| | |||| ||||||||||||||||    
T  45195632 attttgtacgatcaaaattcatgaaggttcaaaaccagaaatcttcaaattacaaggat 45195690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 7574188 - 7574152
Alignment:
Q  310 tttgtcttcgtgagtttaactcaattgataaggacaa 346  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  7574188 tttgtcttcgtgagtttaactcagttggtaaggacaa 7574152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 13246 - 13302
Alignment:
Q  126 aagaaatttcatgagaaagccaccaacgtcctaatatcttaattaactaagcaacgc 182  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  13246 aagaaatttcatgagaaagccaccaccgtcctaatatcttaattaaccaagcaacgc 13302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 9235018 - 9234923
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| |||||||||| | ||||| || | ||||||||||||||||| ||||| ||  ||||| |||||| |||||||||||||||    
T  9235018 atttgagcaaatttcgatttacccctgccatatcttcgagtttgtacagtcaaaatttatgaaggtccaaaaccaaaaatcttcaaattacaagga 9234923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 10343672 - 10343576
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||| |||| |||||||| | | ||||| || ||||||||||||||||||||||||||||  ||||| |||||| ||||||| |||||||    
T  10343672 atttgagcaaacttcagtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaagtacaaaaccaaaaatcttcaaatcacaagga 10343576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 12293037 - 12292941
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||| |||| | | ||||| |||||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  12293037 atttgagcaaatttcggttttccccctgccatatcttcaattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 12292941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 26475915 - 26475841
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| ||||||| || ||||||||| ||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  26475915 cccctgctatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatattcaaattacaagga 26475841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 506 - 608
Target Start/End: Original strand, 32216943 - 32217044
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgca 605  Q
    ||||||||||||||| ||||||||  || ||||| |  ||||||||||||||||||||||||| ||  ||||| |||| | ||||||||||||||||| |    
T  32216943 atttgagcaaatttcgatttaccctgtc-atatctttgattttgtacagtcaaaattcatgaaggtccaaaaccaaaactcttcaaattacaaggatgaa 32217041  T
Q  606 atc 608  Q
    |||    
T  32217042 atc 32217044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 22495901 - 22495996
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  ||||| ||| | ||||| || ||||||||| |||||||||| |||| ||  ||||| |||||| |||||||||||||||    
T  22495901 atttgagcaaatttcggtttactcctgccatatcttcgattttgtaccgtcaaaattcttgaaggtccaaaaccaaaaatcttcaaattacaagga 22495996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 9222558 - 9222624
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  9222558 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 9222624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 535 - 608
Target Start/End: Original strand, 18591350 - 18591423
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatc 608  Q
    ||||| |||||||||||||||||||||||||||| ||  ||||  |||||| |||||| |||||||||| ||||    
T  18591350 atatcttcaattttgtacagtcaaaattcatgaatgtccaaaatcaaaaatcttcaaaatacaaggatgaaatc 18591423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 598
Target Start/End: Original strand, 33708753 - 33708846
Alignment:
Q  506 atttgagcaaatttcaatttac-cccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    |||||||||||||||| ||||| |||| | || || || ||||||||||||||||||||||||| ||  || |  |||||||||||||||||||    
T  33708753 atttgagcaaatttcagtttactccctgccatgtcttcgattttgtacagtcaaaattcatgaaggtccaagatcaaaaatattcaaattacaa 33708846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 1227851 - 1227755
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  1227851 atttgagcaaatttcggtttaccccctatcatatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 1227755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 16659663 - 16659759
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||  |||||| |||||||||||||||    
T  16659663 atttgagcaaatttcggtttaccccctaccatatcttcgattttgtactgtcaaaattcatgaaggtccaaaataaaaaatcttcaaattacaagga 16659759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 13462793 - 13462698
Alignment:
Q  506 atttgagcaaatttcaatttaccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||| | |||||| |||||  ||| | |||||||  ||||| ||||||||||||||||||| ||||| ||| |||||  |||||||||||||||    
T  13462793 atttgaactaatttcgatttaatcctaccatatcattgattttatacagtcaaaattcatgaaggtttagaaccaaaaagcttcaaattacaagga 13462698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 8237783 - 8237717
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| ||||||||||||||||||||||||| |   ||||| |||||  |||||||||||||||    
T  8237783 atatcatcgattttgtacagtcaaaattcatgaaggaccaaaaccaaaaaacttcaaattacaagga 8237717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 17158353 - 17158410
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||| | ||  ||||| |||||| |||||||||||||||    
T  17158353 attttgtacagtcaaaattcatggaggtccaaaaccaaaaatcttcaaattacaagga 17158410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 686492 - 686588
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| ||  ||||| || ||||| ||||||||||||| ||||| ||  ||||  |||||| |||||||||||||||    
T  686492 atttgagcaaatttcggtttaccccctcccatatcttcgattttatacagtcaaaatttatgaaggtccaaaatcaaaaatcttcaaattacaagga 686588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 601
Target Start/End: Original strand, 10546064 - 10546159
Alignment:
Q  508 ttgagcaaatttcaatttaccc--cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| ||||||| ||||||||  || | |||||||| |||||||||||| |||||||||||| |   ||||| |||||  |||||||||||||||    
T  10546064 ttgagaaaatttcgatttacccacctgccatatcatcgattttgtacagttaaaattcatgaaggaccaaaaccaaaaaacttcaaattacaagga 10546159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 21544305 - 21544209
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| |  ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  21544305 atttgagcaaatttcggtttaccccctatcatatctttgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 21544209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 22362793 - 22362697
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||| ||||| | ||||| || ||||||||| ||||||||||||||| ||  ||||| | || | |||||||||||||||    
T  22362793 atttgagcaaatttcggtttaacccttatcatatcttcgattttgtacggtcaaaattcatgaaggtccaaaaccataagtcttcaaattacaagga 22362697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 34414471 - 34414567
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| ||||| ||  | | ||||| || |||||||||||| |||||||||||| ||  ||||| |||||| ||||| |||||||||    
T  34414471 atttgagcaaatttcgatttatcctctgtcatatcttcgattttgtacagttaaaattcatgaaggtccaaaacaaaaaatcttcaagttacaagga 34414567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 601
Target Start/End: Complemental strand, 16119867 - 16119772
Alignment:
Q  507 tttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||| |||||||  |||||||| | | ||||| || |||||||| |||||||||||||||| ||  ||| | |||||| |||||||||||||||    
T  16119867 tttgagtaaatttcggtttaccccctgccatatcttcgattttgtatagtcaaaattcatgaaggtccaaatccaaaaatcttcaaattacaagga 16119772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 3108712 - 3108778
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| ||||| |||| |||||||| ||||| ||  ||||| |||||| |||||||||||||||    
T  3108712 atatcatcgattttatacaatcaaaattaatgaaggtccaaaaccaaaaatcttcaaattacaagga 3108778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 506 - 599
Target Start/End: Original strand, 7321961 - 7322055
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    |||||||||||||||  |||||||| | | ||||  || |||||| ||| |||||||||||||| ||  ||||| |||||| |||||||||||||    
T  7321961 atttgagcaaatttcggtttaccccctatcatatattcgattttgcacaatcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaag 7322055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 13729167 - 13729233
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| |||||||| |||||| ||  ||||| |||||| |||||||||||||||    
T  13729167 atatcgtcgattttgtactgtcaaaatacatgaaggtccaaaaccaaaaatcttcaaattacaagga 13729233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 26882221 - 26882155
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||  ||||| | |||| |||||||||||||||    
T  26882221 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccagaaatcttcaaattacaagga 26882155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 506 - 567
Target Start/End: Original strand, 34077546 - 34077608
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatga 567  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||    
T  34077546 atttgagcaaatttcggtttaccccctaccatatcttcgattttgtacagtcaaaattcatga 34077608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 2270588 - 2270531
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| ||  ||||| |||||| ||  |||||||||||    
T  2270588 attttgtacagtcaaaattcatgaaggtccaaaaccaaaaatctttgaattacaagga 2270531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 585
Target Start/End: Complemental strand, 14291246 - 14291166
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaat 585  Q
    ||||||||||||||   |||||||||| | ||||| || |||||||| |||||||||||||||| ||  ||||| ||||||    
T  14291246 atttgagcaaattttggtttaccccttgccatatcttcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaat 14291166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 535 - 603
Target Start/End: Complemental strand, 29942670 - 29942602
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    ||||| || ||||||||| |||| |||||||||| ||  ||||  |||||| |||||||||||||||||    
T  29942670 atatcttcgattttgtactgtcagaattcatgaaggtccaaaatcaaaaatcttcaaattacaaggatg 29942602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 21040017 - 21039943
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| ||||||| || ||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  21040017 cccctgctatatcttcgattttgtacagtcaaaattcatgaaggtccaaaacaaaaaatattcaaattacaagga 21039943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 599
Target Start/End: Original strand, 31312654 - 31312748
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||| || |||||| |||||| |||||||||||||    
T  31312654 atttgagcaaatttcggtttaccccctgtcatatcttcgattttgtacagtcaaaattcatgaaggtctaaaaccaaaaatcttcaaattacaag 31312748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 11721440 - 11721344
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  11721440 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 11721344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 30916657 - 30916561
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||   |||||||||| | ||||| || |||||||||| |||||||||||||| || |||||| |||||| |||||||||||||||    
T  30916657 atttgagcaaattttggtttaccccttgccatatcttcgattttgtacaatcaaaattcatgaaggtataaaaccaaaaatcttcaaattacaagga 30916561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 34309511 - 34309607
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||| ||||||  ||||||||| | | |||||||| ||||||||||||||||||||||||| ||  |||||||||||  |||||||||||||||    
T  34309511 atttgagaaaattttgatttaccccctgtcatatcatcgattttgtacagtcaaaattcatgaaggtccaaaactaaaaaacttcaaattacaagga 34309607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 608
Target Start/End: Complemental strand, 8855572 - 8855469
Alignment:
Q  506 atttgagcaaatttcaattta-ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgc 604  Q
    |||||||||||||||| ||   ||||| | |||||||| ||||||||||||||||||||||||| ||  ||||| |||||  |||||||||||||||||     
T  8855572 atttgagcaaatttcagttactcccctaccatatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaaggatgg 8855473  T
Q  605 aatc 608  Q
    ||||    
T  8855472 aatc 8855469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 601
Target Start/End: Complemental strand, 23159644 - 23159545
Alignment:
Q  503 tttatttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||||||||||||||| | | ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| || |||||| |||||    
T  23159644 tttatttgagcaaatttcaatttaccccctgtaatatcttcgattttgtaccgtcaaaattcatgaaggtccaaaaccaaaaatctttaaattataagga 23159545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 20355159 - 20355097
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||| |||||| |||||||||||    
T  20355159 atatcatcgattttgtacagtcaaaattcatgaaggttcaaaaccaaaaatcttcaaattaca 20355097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 506 - 603
Target Start/End: Original strand, 35687380 - 35687477
Alignment:
Q  506 atttgagcaaatttcaatttacc-ccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    ||||||||||||||| ||||||| || || |||||||| ||||||||| ||||||||| ||||||||  ||||  |||||| |||||||||||||||||    
T  35687380 atttgagcaaatttcgatttacctccgtc-atatcatcgattttgtaccgtcaaaatttatgaaagtccaaaatcaaaaatcttcaaattacaaggatg 35687477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 22756265 - 22756361
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || |||||||||| |||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  22756265 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 22756361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 603
Target Start/End: Original strand, 23108833 - 23108932
Alignment:
Q  506 atttgagcaaatttcaatttacccc--ttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||||||||||  ||||| ||  ||| || ||||| ||||||||||||||||||||||||| || |||||| | |||| |||||||||||| ||||    
T  23108833 atttgagcaaatttcggtttactccatttccatctcatctattttgtacagtcaaaattcatgaaggtctaaaaccataaatcttcaaattacaatgatg 23108932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 41123345 - 41123441
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||||| ||||||||||| ||  ||||| |||||| |||||||||||||||    
T  41123345 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtacagtcgaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 41123441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 12148139 - 12148205
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  12148139 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacaaaaaatcttcaaattacaagga 12148205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 609
Target Start/End: Complemental strand, 31567777 - 31567703
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatct 609  Q
    |||||||  |||||||||||||||||||| |||| ||  ||||| |||||| ||||||||||||||||| |||||    
T  31567777 atatcattgattttgtacagtcaaaattcttgaaggtccaaaaccaaaaatcttcaaattacaaggatgaaatct 31567703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 4414062 - 4414005
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  4414062 attttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 4414005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 540 - 601
Target Start/End: Complemental strand, 27331048 - 27330987
Alignment:
Q  540 atcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||||||||||||| || || |||||| |||||  |||||||||||||||    
T  27331048 atcaattttgtacagtcaaaattcataaaggtctaaaaccaaaaaacttcaaattacaagga 27330987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 6117760 - 6117664
Alignment:
Q  506 atttgagcaaatttcaatttaccc-cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||| || || | ||||| || |||||||||||||||||||| |||| ||  ||||| |||||||||||||||| |||||    
T  6117760 atttgagcaaatttccgtttatcctctgccatatcttcgattttgtacagtcaaaattcttgaaggtccaaaaccaaaaatattcaaattataagga 6117664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 23188766 - 23188862
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||| ||||||||||||||| || |||||| |||||| |||| |||| |||||    
T  23188766 atttgagcaaatttcggtttaccccctgtcatatcttcgattttgtactgtcaaaattcatgaaggtctaaaaccaaaaatcttcatattataagga 23188862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 25962976 - 25962880
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || |||||||||  |||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  25962976 atttgagcaaatttcggtttaccccctgccatatcttcgattttgtactatcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 25962880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 25233857 - 25233923
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  25233857 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 25233923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 25298017 - 25298083
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||| ||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  25298017 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 25298083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 31920204 - 31920138
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||| ||||||||||||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  31920204 atattatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 31920138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 601
Target Start/End: Original strand, 17885943 - 17886000
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||| ||||||||||||||||||  ||||| |||| | |||||||||||||||    
T  17885943 attttgtactgtcaaaattcatgaaagtccaaaaccaaaattcttcaaattacaagga 17886000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 598
Target Start/End: Complemental strand, 26243275 - 26243182
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    |||||||||||||||  |||||||| | | ||||| |||||||| ||  ||||||||||||||| ||  ||||| |||||| ||||||||||||    
T  26243275 atttgagcaaatttcggtttaccccctgccatatcttcaattttttattgtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaa 26243182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 597
Target Start/End: Original strand, 4561804 - 4561896
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||||||||||  |||||||| | | ||||| || ||||||||||| |||||||||||||  |  ||||| |||||| |||||||||||    
T  4561804 atttgagcaaatttcggtttaccccctatcatatcttcgattttgtacagccaaaattcatgaagatccaaaaccaaaaatcttcaaattaca 4561896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 6896985 - 6897081
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| || |||||||||  |||||||| ||||| ||  ||||| |||||| |||||||||||||||    
T  6896985 atttgagcaaatttcggtttaccccctgtcatatcttcgattttgtactatcaaaatttatgaaggtccaaaacaaaaaatcttcaaattacaagga 6897081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 7577893 - 7577989
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| |  ||||||||| ||||||||||||||| ||  ||||| |||||| || ||||||||||||    
T  7577893 atttgagcaaatttcggtttaccccatgtcatatctttgattttgtaccgtcaaaattcatgaaggtccaaaaccaaaaatctttaaattacaagga 7577989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 28796521 - 28796425
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  |||||||| ||  ||||| || ||||| ||  ||||||||||||||| ||| ||||| |||||| |||||||||||||||    
T  28796521 atttaagcaaatttcggtttaccccctcccatatcttcgattttatatggtcaaaattcatgaaggttcaaaaccaaaaatcttcaaattacaagga 28796425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 523 - 609
Target Start/End: Original strand, 21144165 - 21144252
Alignment:
Q  523 tttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatgcaatct 609  Q
    |||||||||| | |||||||| | ||||||| || |||||||||||| ||  ||| |||||||| |||||||||||||| || |||||    
T  21144165 tttaccccttgccatatcatctactttgtacggttaaaattcatgaaggtccaaacctaaaaatcttcaaattacaaggttggaatct 21144252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 544 - 599
Target Start/End: Complemental strand, 42368572 - 42368517
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaag 599  Q
    ||||||||||||||||||||||||| |   ||||| |||||| |||||||||||||    
T  42368572 attttgtacagtcaaaattcatgaagggccaaaacaaaaaatcttcaaattacaag 42368517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 585
Target Start/End: Complemental strand, 21125225 - 21125175
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaat 585  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||||| ||||    
T  21125225 atatcatctattttgtacagtcaaaattcatgaaggtccaaaactagaaat 21125175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 40765528 - 40765462
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||| |||||| ||| |||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  40765528 atatcatcgattttgaacaatcaaaattcatgaaggtccaaaaccaaaaaacttcaaattacaagga 40765462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 42778949 - 42778887
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||||||  ||||||||||| ||||||||||||| |||||||||  ||| | |||||||||||    
T  42778949 atatcattgattttgtacagccaaaattcatgaaggtttaaaaccgaaattcttcaaattaca 42778887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Complemental strand, 17190832 - 17190799
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaa 568  Q
    |||||||| |||||||||||||||||||||||||    
T  17190832 atatcatcgattttgtacagtcaaaattcatgaa 17190799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 21180217 - 21180160
Alignment:
Q  544 attttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||| ||||||||||||||||||| ||||| | |||  |||| ||||||||||    
T  21180217 attttgtactgtcaaaattcatgaaagttcaaaaccagaaaccttcatattacaagga 21180160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 29691099 - 29691042
Alignment:
Q  541 tcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaa 598  Q
    ||||||||||| |||||||||||||||| ||  ||||| |||||| ||||| ||||||    
T  29691099 tcaattttgtaaagtcaaaattcatgaaggtccaaaacaaaaaatcttcaacttacaa 29691042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 577
Target Start/End: Original strand, 8861407 - 8861479
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaa 577  Q
    |||||| ||||||||  |||||||| | | ||||| || ||||||||||||||||||||||||| || |||||    
T  8861407 atttgaacaaatttcggtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtctaaaa 8861479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 38874538 - 38874634
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||| ||||||||||  |||||||| | | ||||| || |||||||||||  || ||||||||| ||  ||||| |||||| |||||||||||||||    
T  38874538 attttagcaaatttcggtttaccccctatcatatcttcgattttgtacagctaacattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 38874634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 18801 - 18897
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||| |||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||| ||||||||    
T  18801 atttgagcaaatttcagtttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaaatacaagga 18897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 212687 - 212591
Alignment:
Q  506 atttgagcaaatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||  ||||||||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  212687 atttgagcaaattttgatttaccccctgccatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 212591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 82292 - 82230
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattaca 597  Q
    |||| ||||||||||||||||||||||||||||| || |||||| |||||  |||||||||||    
T  82292 atattatcaattttgtacagtcaaaattcatgaaggtctaaaacaaaaaaatttcaaattaca 82230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 332238 - 332142
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||| ||| | | ||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||||||    
T  332238 atttgagcaaatttctgtttatcccctatcatatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaatcttcaaattacaagga 332142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 9396 - 9299
Alignment:
Q  506 atttgagcaaatttcaatttaccc--cttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||||||||||||| ||||||||  || | ||||| || ||||| ||||||||||||||||||| ||  ||||| |||||  |||||||||||||||    
T  9396 atttgagcaaatttcgatttaccctcctcccatatcttcgattttatacagtcaaaattcatgaaggtccaaaaccaaaaaatttcaaattacaagga 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 12612 - 12546
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| || ||||||||||||||||||||||| ||||  ||||| |||||| |||||||||||||||    
T  12612 atatcttcgattttgtacagtcaaaattcatggaagtccaaaaccaaaaatcttcaaattacaagga 12546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 608
Target Start/End: Original strand, 3486 - 3589
Alignment:
Q  506 atttgagcaaatttcaatttacccc--ttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||||||||||||  ||||||||  ||| | ||  || ||||||||||||||||||||||| ||| || |||| ||||| ||||||||||||||||||    
T  3486 atttgagcaaatttcggtttaccccccttccaaattttcgattttgtacagtcaaaattcatg-aaggttcaaacaaaaaaaattcaaattacaaggatg 3584  T
Q  604 caatc 608  Q
     ||||    
T  3585 aaatc 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 603
Target Start/End: Original strand, 145100 - 145189
Alignment:
Q  515 aatttcaatttacccctt-ctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaaggatg 603  Q
    |||||| ||||||||| | | |||||||| |||||||||||||| |||||||||| ||  ||||  |||||| ||||||||| |||||||    
T  145100 aatttcgatttaccccctaccatatcatctattttgtacagtcacaattcatgaaggtccaaaatcaaaaatcttcaaattataaggatg 145189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Original strand, 63232 - 63328
Alignment:
Q  506 atttgagcaaatttcaatttaccccttct-atatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    |||||||||||||||  |||||||| | | ||||| |  ||||||||| ||||||||||||||| ||  ||||| ||||||  ||||||||||||||    
T  63232 atttgagcaaatttcggtttaccccctatcatatctttgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaatcatcaaattacaagga 63328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 84326 - 84252
Alignment:
Q  527 ccccttctatatcatcaattttgtacagtcaaaattcatgaaagtttaaaactaaaaatattcaaattacaagga 601  Q
    ||||| |||||||||| ||||||||||||| ||||||||||| ||  ||||  | |||| ||||||||| |||||    
T  84326 cccctgctatatcatcgattttgtacagtcgaaattcatgaaggtccaaaatcagaaatcttcaaattataagga 84252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Complemental strand, 25829 - 25796
Alignment:
Q  535 atatcatcaattttgtacagtcaaaattcatgaa 568  Q
    ||||||||||||||||||| ||||||||||||||    
T  25829 atatcatcaattttgtacactcaaaattcatgaa 25796  T

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