View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13296_high_6 (Length: 397)
Name: NF13296_high_6
Description: NF13296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13296_high_6 |
 | |
|
| [»] scaffold0274 (2 HSPs) |
| | |
|
| [»] scaffold0640 (2 HSPs) |
| | |
|
| [»] scaffold0648 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 345; Significance: 0; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 9 - 381
Target Start/End: Complemental strand, 17942617 - 17942245
Alignment:
| Q |
9 |
agcagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcct |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17942617 |
agcagagaggtgtgttagaacttcaccagacagcctattactccataggttcaagacttccagttctgacaagttcttccaactatgtggaattgatcct |
17942518 |
T |
|
| Q |
109 |
gagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaat |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17942517 |
gagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaattattgtgatccaacaataaagtggaacaat |
17942418 |
T |
|
| Q |
209 |
ttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctat |
308 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17942417 |
ttagtgtaaggttggatatgtcttcagcaatcgaattatttgacaaataaatttcattgggtattctttctataaggctcgagaacttatttctatctac |
17942318 |
T |
|
| Q |
309 |
caacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17942317 |
caacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
17942245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 26 - 379
Target Start/End: Complemental strand, 19393795 - 19393442
Alignment:
| Q |
26 |
gaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaaga |
125 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19393795 |
gaacttcaccagacagcttattactccataggttcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttataaga |
19393696 |
T |
|
| Q |
126 |
caaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagat |
225 |
Q |
| |
|
|||||||| | || | |||||| |||||||| |||||||||||||||||| |||||||||||||| ||||| | |||||||||| || ||||||||| |
|
|
| T |
19393695 |
caaatcaacccaatctgccattggagatatgtttgggagtcctcctgtgaaattattgtgatccaaccataaaaagaaacaatttagagttaggttagat |
19393596 |
T |
|
| Q |
226 |
atgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgagc |
325 |
Q |
| |
|
||||||||| |||||||||| ||||||||| ||||||| || ||||||||||||||| || |||||||||||||||| || || |||||||||||||| |
|
|
| T |
19393595 |
atgtcttcagcaatcgaattgtttgacaaaataatttcaccggatattctttctataagccttgagaacttatttctatttaccagcgaaattcctgagc |
19393496 |
T |
|
| Q |
326 |
tcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagt |
379 |
Q |
| |
|
||||||| || || | ||| | |||||| |||||||||||||| |||||||||| |
|
|
| T |
19393495 |
tcgataagtcgagtatttgcaatgacttctgtgtatatatccatgatggaaagt |
19393442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 26 - 381
Target Start/End: Complemental strand, 19414830 - 19414475
Alignment:
| Q |
26 |
gaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaaga |
125 |
Q |
| |
|
||||||||||||| |||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19414830 |
gaacttcaccagatagcctattactccacaggttcaagactgtcagttctttcaagttcttccaactatgtggaattgatcctgagaaggagttgtaaga |
19414731 |
T |
|
| Q |
126 |
caaatcaattctattggaca-ttggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttaga |
224 |
Q |
| |
|
|||||||| | | |||| ||||||||||||| || ||||| ||||||||||||||||||||||| ||||| | ||||||||| ||||| |||||||| |
|
|
| T |
19414730 |
caaatcaacaa-actcgacaattggtgatatgtttggaagtccacctgtgaaactattgtgatccaaaaataatgcggaacaattcagtgttaggttaga |
19414632 |
T |
|
| Q |
225 |
tatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgag |
324 |
Q |
| |
|
||||||||| ||||| |||| ||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| || |||||||| ||| |
|
|
| T |
19414631 |
tatgtcttctgcaatcaaattgtttgacaaataaagttcatcatatattccttctataaggctcgagaacttatttctatctacgaatgaaattcccgag |
19414532 |
T |
|
| Q |
325 |
ctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
|||||||| || |||| || ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
19414531 |
ctcgataagtcgagaacatgcagtaacttttgtgtatatatccaagatggaaagttt |
19414475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 37 - 377
Target Start/End: Complemental strand, 19437593 - 19437253
Alignment:
| Q |
37 |
gacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattc |
136 |
Q |
| |
|
|||| |||||||||||| | |||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19437593 |
gacaacctattactccacaggttcatgactctcagttctttcaagttcttccaactatgcggaattgatcctgagaaggagttgtaagacaaatcaacta |
19437494 |
T |
|
| Q |
137 |
tattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaac |
236 |
Q |
| |
|
| | || ||| |||||||||| |||||||||||| |||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| | |
|
|
| T |
19437493 |
tttgggcaattagtgatatgtttgggagtcctcctacgaaattattgtgatccaagaataagatggaacaatttagtgttaggttagatatgtcttcagc |
19437394 |
T |
|
| Q |
237 |
aatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatca |
336 |
Q |
| |
|
||||||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||||| || |
|
|
| T |
19437393 |
aatcgaattgtttgacaaactaagttcattgggtattctttctataaggctcaagaacttatttctatctaccaacgcaattctcgagctcgataagtcg |
19437294 |
T |
|
| Q |
337 |
agaagttgtagtgacttttgtgtatatatccaagatggaaa |
377 |
Q |
| |
|
||| |||||||||| |||| |||||||||||||||||||| |
|
|
| T |
19437293 |
agagattgtagtgacgtttgggtatatatccaagatggaaa |
19437253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 27 - 381
Target Start/End: Complemental strand, 18144835 - 18144481
Alignment:
| Q |
27 |
aacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagac |
126 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||||||| ||||||||||||| |||| || ||||||||| |
|
|
| T |
18144835 |
aacttcaccagacagcctattactccatagattcaagaatgtcagttctttcaagttcttccaactatatggaattgatcctcagaatgaattgtaagac |
18144736 |
T |
|
| Q |
127 |
aaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagata |
226 |
Q |
| |
|
||||||| || || |||||| |||||||| || ||||||||||||||| |||||||||||||| || |||||||||||||| |||||||||| |
|
|
| T |
18144735 |
aaatcaacataataggccattggcgatatgtttggtagtcctcctgtgaaattattgtgatccaaccttatgtacgaacaatttagtgttaggttagata |
18144636 |
T |
|
| Q |
227 |
tgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgagct |
326 |
Q |
| |
|
|||||||| ||||| |||| ||||||||| ||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
18144635 |
tgtcttcagcaatccaattgtttgacaaaataatttcactaggtattctttctataaggctcgagaacttatttctatctaccaacgaaattcccaagct |
18144536 |
T |
|
| Q |
327 |
cgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
||||| || ||| |||| |||||||| |||||||||||||||||||| |||||| |
|
|
| T |
18144535 |
cgatatgtcgagatgttgcagtgacttctgtgtatatatccaagatgggaagttt |
18144481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 11 - 381
Target Start/End: Complemental strand, 17950493 - 17950123
Alignment:
| Q |
11 |
cagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctga |
110 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||| | || | | | | ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
17950493 |
cagagaggtgtcctagaacttcaccagatagcctattactccaaaggttaatgtaatgtaattctgacaagttctttaaactatgtggaattgatcctga |
17950394 |
T |
|
| Q |
111 |
gaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaattt |
210 |
Q |
| |
|
||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| || ||||||| |
|
|
| T |
17950393 |
gaaggagttgtaagaaaaatcaactctataggacattggtgatatgttcgggagtcctcctgtgaaattattgtgatgcaaatataactcggtacaattt |
17950294 |
T |
|
| Q |
211 |
agtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatca |
310 |
Q |
| |
|
|||| ||||||| |||||||||| |||||||||||||||||||| ||| || | | ||| |||||| ||||||| |||||||||||| |||||| || |
|
|
| T |
17950293 |
agtgataggttagttatgtcttcagcaatcgaattatttgacaaaaaaagttgacaagctatactttctgtaaggctcgagaacttatttgtatctacca |
17950194 |
T |
|
| Q |
311 |
acgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
|||||||||| ||||||||||| ||||| | || || ||||||||||| |||||||| |||||||||||| |
|
|
| T |
17950193 |
acgaaattcccgagctcgataagtcaagcatttcgagagacttttgtgtttatatccaggatggaaagttt |
17950123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 73 - 381
Target Start/End: Original strand, 14895791 - 14896099
Alignment:
| Q |
73 |
tctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctg |
172 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||| | |||| ||||| | ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
14895791 |
tctgtcaagttcttccaactatgtggaatttctcctgagaaggagttgaatgacacatcaacatgagtggtcattggtgatatgtttgggagtcctcctg |
14895890 |
T |
|
| Q |
173 |
tgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtat |
272 |
Q |
| |
|
||||| | |||||||||||| |||| ||||||||||||| |||||||||||||||||| |||||||||| |||| |||| || |||||||||||| |
|
|
| T |
14895891 |
tgaaattgttgtgatccaaccttaaaaacaaacaatttagtgttaggttagatatgtcttcagcaatcgaattgtttgtcaaaataagttcattgggtat |
14895990 |
T |
|
| Q |
273 |
tctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagat |
372 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| || ||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
14895991 |
tctttctacaaggctcgagaacttatttctatccacaaacgaaattcctgagctcgataagtcgagatcttgcagtgacttttgtgtatatatccaagat |
14896090 |
T |
|
| Q |
373 |
ggaaagttt |
381 |
Q |
| |
|
||||||||| |
|
|
| T |
14896091 |
ggaaagttt |
14896099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 11 - 381
Target Start/End: Original strand, 17726876 - 17727246
Alignment:
| Q |
11 |
cagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctga |
110 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| || | || | | |||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
17726876 |
cagagaggtgtcctagaacttcaccagacagcctattactccataggtttaggagtcctagttctctcaagttcttccaactatctggaattgatcctga |
17726975 |
T |
|
| Q |
111 |
gaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaattt |
210 |
Q |
| |
|
|||||| |||||||||||||||| | | | ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||| || |
|
|
| T |
17726976 |
gaaggaattgtaagacaaatcaactgttaaagccattggtgataggtttgggagtcctcctgtgaaattattgtgatccaacaataagtaggaacaaatt |
17727075 |
T |
|
| Q |
211 |
agtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatca |
310 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| ||||||||| || | ||||||||| |||||||| || || ||||| ||| |||||| || |
|
|
| T |
17727076 |
agtgttaggttagatatgtcttcaacaattgaattgtttgacaaaataagaaaaccgggtattctctctataagtctcgaaaacttttttgtatctacca |
17727175 |
T |
|
| Q |
311 |
acgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
| | |||||| ||| ||||||| || ||| ||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
17727176 |
atgtaattcccgagttcgataagtcgagattttgcaatgacttttgtgtatatatccaagatggaaagttt |
17727246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 11 - 381
Target Start/End: Original strand, 19028105 - 19028475
Alignment:
| Q |
11 |
cagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctga |
110 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| || | || | | |||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
19028105 |
cagagaggtgtcctagaacttcaccagacagcctattactccataggtttaggagtcctagttctctcaagttcttccaactatctggaattgatcctga |
19028204 |
T |
|
| Q |
111 |
gaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaattt |
210 |
Q |
| |
|
|||||| |||||||||||||||| | | | ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||| || |
|
|
| T |
19028205 |
gaaggaattgtaagacaaatcaactgttaaagccattggtgataggtttgggagtcctcctgtgaaattattgtgatccaacaataagtaggaacaaatt |
19028304 |
T |
|
| Q |
211 |
agtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatca |
310 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| ||||||||| || | ||||||||| |||||||| || || ||||| ||| |||||| || |
|
|
| T |
19028305 |
agtgttaggttagatatgtcttcaacaattgaattgtttgacaaaataagaaaaccgggtattctctctataagtctcgaaaacttttttgtatctacca |
19028404 |
T |
|
| Q |
311 |
acgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
| | |||||| ||| ||||||| || ||| ||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
19028405 |
atgtaattcccgagttcgataagtcgagattttgcaatgacttttgtgtatatatccaagatggaaagttt |
19028475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 11 - 381
Target Start/End: Complemental strand, 18109100 - 18108730
Alignment:
| Q |
11 |
cagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctga |
110 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||| | || | | | | || ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
18109100 |
cagagaggtgtcctagaacttcaccagatagcctattactccaaaggttaatgtaatgtaattatgacaagttcttccaactatgatgaattgatcctga |
18109001 |
T |
|
| Q |
111 |
gaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaattt |
210 |
Q |
| |
|
||||||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||| |||| ||| |||| || ||||||| |
|
|
| T |
18109000 |
gaaggagttgtaagaaaaatcaactctataggacattggtgatatgttcgagagtcctcctgtgaaattattatgatgcaaatataactcggtacaattt |
18108901 |
T |
|
| Q |
211 |
agtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatca |
310 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||||||| ||| || | | | ||| |||||||||||||| ||||||||||| |||||| || |
|
|
| T |
18108900 |
agtgataggttagatatgtcttcagcaatcgaattatttgacaaaaaaagttgagttgctatactttctataaggctcaagaacttatttgtatctacca |
18108801 |
T |
|
| Q |
311 |
acgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
||||||||| ||||||||||| ||||| | | || |||||||||||||||||||| |||| |||||| |
|
|
| T |
18108800 |
acgaaattcacgagctcgataagtcaagcatctcgagagacttttgtgtatatatccagaatgggaagttt |
18108730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 78 - 381
Target Start/End: Complemental strand, 18147424 - 18147121
Alignment:
| Q |
78 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaa |
177 |
Q |
| |
|
||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| | || |||||||||||||| || ||||| ||||||||| |
|
|
| T |
18147424 |
caagttcttccaagtatgcggaattgatcctgagaaggagttgtaggacaaatcaacaaactcggcaattggtgatatgtttggaagtccacctgtgaaa |
18147325 |
T |
|
| Q |
178 |
ctattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattcttt |
277 |
Q |
| |
|
||||||| |||||| ||||| | ||||||||| ||||| ||||||||||||||||| |||||||||| ||||||||| || |||| | | |||||||| |
|
|
| T |
18147324 |
ctattgttatccaaaaataatgaggaacaattcagtgttaggttagatatgtcttctgcaatcgaattgtttgacaaaataagttcagtagatattcttt |
18147225 |
T |
|
| Q |
278 |
ctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaa |
377 |
Q |
| |
|
|||||||||| ||||||||||||||||||| || |||||||||||||| ||||| || |||| || |||||||||||||||||||||||||||| ||| |
|
|
| T |
18147224 |
ctataaggctcgagaacttatttctatctacgaatgaaattcctgagcttgataagtcgagaacatgcagtgacttttgtgtatatatccaagatgaaaa |
18147125 |
T |
|
| Q |
378 |
gttt |
381 |
Q |
| |
|
|||| |
|
|
| T |
18147124 |
gttt |
18147121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 26 - 381
Target Start/End: Complemental strand, 19334655 - 19334300
Alignment:
| Q |
26 |
gaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaaga |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| || | |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19334655 |
gaacttcaccagacagcctattactccataggttcaggagtgatagttctttcaagttcttccaactatgtggaattgatcctgagaaggagttgtaaga |
19334556 |
T |
|
| Q |
126 |
caaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagat |
225 |
Q |
| |
|
|||||||| | || ||||||||||| ||| |||||||||| || |||| |||||| ||||||| |||| ||||||||||||| ||||| ||| |
|
|
| T |
19334555 |
caaatcaactacccaggccattggtgataagtttgggagtcctcttgcgaaattattgttatccaaccataagaacaaacaatttagtgttaggttggat |
19334456 |
T |
|
| Q |
226 |
atgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgagc |
325 |
Q |
| |
|
||||||||| |||||||||| ||||||||| || ||||| || ||||||||||||| | |||||||||| |||||||| ||| |||||||| ||| |
|
|
| T |
19334455 |
atgtcttcagcaatcgaattgtttgacaaaataagagaattggctactctttctataaggttcgagaacttatgtctatctaccaatgaaattcccgagt |
19334356 |
T |
|
| Q |
326 |
tcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
| ||||| || |||| ||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
19334355 |
ttgataactcgagaacttgcaatgacttttgtgtatatatccaagatggaaagttt |
19334300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 78 - 381
Target Start/End: Complemental strand, 19425281 - 19424978
Alignment:
| Q |
78 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaa |
177 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| | || | ||||| | |||||||||||||||||||||||||| |
|
|
| T |
19425281 |
caagttcttccaactatgtggaattgatcccgagaatgagttgtaagacaaatcaactgcataagccattgttaatatgttcgggagtcctcctgtgaaa |
19425182 |
T |
|
| Q |
178 |
ctattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattcttt |
277 |
Q |
| |
|
|||||| |||||| |||| |||||||||||||||| ||||| |||||||||||| ||||| |||| ||||||||| || | || | |||||||| |
|
|
| T |
19425181 |
ttattgttatccaatcctaaattggaacaatttagtgttaggttggatatgtcttcagcaatcaaattgtttgacaaaataaggtgatctgttattcttt |
19425082 |
T |
|
| Q |
278 |
ctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaa |
377 |
Q |
| |
|
||| |||||| |||||||||||||||| || ||| |||||||| ||||||||||| || ||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
19425081 |
ctacaaggctcgagaacttatttctatgtaccaatgaaattcccgagctcgataagtcgagactttgcagtgacttttgtgtatatatccaagatggaaa |
19424982 |
T |
|
| Q |
378 |
gttt |
381 |
Q |
| |
|
|||| |
|
|
| T |
19424981 |
gttt |
19424978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 37 - 379
Target Start/End: Complemental strand, 18103981 - 18103639
Alignment:
| Q |
37 |
gacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattc |
136 |
Q |
| |
|
|||| |||||||||||| | ||||| |||| ||||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
18103981 |
gacaacctattactccacagattcatgactctcagttctttcatgttcttccaactatgaggaattgttcctgagaaggagttgtaagacaaatcgattt |
18103882 |
T |
|
| Q |
137 |
tattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaac |
236 |
Q |
| |
|
| || ||||||||||||||| |||||||||||||||||| |||||||||||| |||| ||||||||||||| || |||||||| ||||||| |
|
|
| T |
18103881 |
caaaggccattggtgatatgtttgggagtcctcctgtgaaattattgtgatccacacttaaaaacaaacaatttagtgttagcttagatatatcttcaaa |
18103782 |
T |
|
| Q |
237 |
aatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatca |
336 |
Q |
| |
|
|||| |||| ||||||||| ||||| | || ||||||||| ||||||||||||||||| |||||||||| ||||||||||| |||||| ||| || |
|
|
| T |
18103781 |
aatcaaattgtttgacaaaagaatttgaaaggatattctttcgataaggctagagaacttctttctatctacaaacgaaattcccgagctcaatatgtcg |
18103682 |
T |
|
| Q |
337 |
agaagttgtagtgacttttgtgtatatatccaagatggaaagt |
379 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
18103681 |
agaacttgcagtgacttttgtgtatatatccaaaatggaaagt |
18103639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 9 - 379
Target Start/End: Complemental strand, 19381556 - 19381186
Alignment:
| Q |
9 |
agcagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcct |
108 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19381556 |
agcagagaggtgtgctagaacttcaccagacagcctattactccacagtttcaagacttcaagttctgacaagttcttccaactatgcggaattgatcct |
19381457 |
T |
|
| Q |
109 |
gagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaat |
208 |
Q |
| |
|
||||||||||||||||||||||||| | || | ||||||||||||| |||||||| | ||||||| |||||||||||| ||| |||||| |
|
|
| T |
19381456 |
gagaaggagttgtaagacaaatcaacaaactcggccgttggtgatatgtttgggagtccacttgtgaaattattgtgatccagacttaaccatgaacaag |
19381357 |
T |
|
| Q |
209 |
ttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctat |
308 |
Q |
| |
|
||||| |||||||| |||||| || ||| ||||| ||||||| | || ||| ||||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
19381356 |
aaagtgttaggttagacatgtctacagaaattgaattctttgacagaataagttcgctgggtattctttctataagattcgtaaacttatttctatctac |
19381257 |
T |
|
| Q |
309 |
caacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagt |
379 |
Q |
| |
|
|||||||||| | | ||||||||| || ||| || |||||||||||||||||||||||| ||||||||| |
|
|
| T |
19381256 |
caacgaaattaccgcgctcgataagtcgagatctttcagtgacttttgtgtatatatccaacatggaaagt |
19381186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 26 - 381
Target Start/End: Original strand, 18873232 - 18873593
Alignment:
| Q |
26 |
gaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaaga |
125 |
Q |
| |
|
||||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
18873232 |
gaacttcaccagatagcctattactccacaggttcaagactatcagttctttcaagttcttccaactatgtggaattgatcctgagaaggaattgtaaga |
18873331 |
T |
|
| Q |
126 |
caaatcaattctattggacattggtgat------atgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaagg |
219 |
Q |
| |
|
|||||||||| | || |||| |||| ||||| |||||||||||||||||| |||||||||| || ||| | ||||||||||||| | | |
|
|
| T |
18873332 |
caaatcaattattttctcaattgctgatccaactatgtttgggagtcctcctgtgaaattattgtgatctaaacttaagcagaaacaatttagtgttatg |
18873431 |
T |
|
| Q |
220 |
ttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatcaacgaaattc |
319 |
Q |
| |
|
||||||||||||||| ||||| |||| ||||||||| || | |||||||||||||||||||||||| |||||||||||||||| || |||||||||| |
|
|
| T |
18873432 |
ttagatatgtcttcagcaatcaaattgtttgacaaaataagataattgggtattctttctataaggctcgagaacttatttctatttaccaacgaaattt |
18873531 |
T |
|
| Q |
320 |
ctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
| | |||||||| || ||| || |||||||| |||||||| |||||||||||||||||| |
|
|
| T |
18873532 |
cggcgctcgatatgtcgagattttccagtgacttctgtgtatagatccaagatggaaagttt |
18873593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 34 - 381
Target Start/End: Complemental strand, 18016660 - 18016313
Alignment:
| Q |
34 |
ccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaa |
133 |
Q |
| |
|
||||||||| ||||| |||| | |||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
18016660 |
ccagacagcttattattccacaggttcatgactctcagttctgacaagttcttccaactatgtggaattgatcttgagaaggagttgtaagataaatcaa |
18016561 |
T |
|
| Q |
134 |
ttctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttc |
233 |
Q |
| |
|
| | | ||||||||| ||| |||||||||||||||||| |||| ||||||||| ||| |||||||| ||||| ||||||||||| ||||| |
|
|
| T |
18016560 |
caatcgcaggctttggtgataggtttgggagtcctcctgtgaaattattatgatccaaccttaacaccgaacaattaagtgttaggttagatatatcttc |
18016461 |
T |
|
| Q |
234 |
aacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaa |
333 |
Q |
| |
|
| |||||||||| ||||||||| ||| | | || |||||||||||||||||| |||||||||| |||||||| ||| |||||||| | |||||||| |
|
|
| T |
18016460 |
agcaatcgaattgtttgacaaaacaatataaaaggatattctttctataaggctcgagaacttatatctatctaccaatgaaattcccgcgctcgatatg |
18016361 |
T |
|
| Q |
334 |
tcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
|| ||| ||| ||||| || ||||||||||||||||||||||||||| |
|
|
| T |
18016360 |
tcgagattttgcagtgatttctgtgtatatatccaagatggaaagttt |
18016313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 79 - 381
Target Start/End: Complemental strand, 19464949 - 19464647
Alignment:
| Q |
79 |
aagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaac |
178 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||||||||||| |||||| |
|
|
| T |
19464949 |
aagttcttccaactatatggaattgttcctgagaaggagttgtaagacaaatcaactctaaaagccattggtgatatgtttgggagtcctccagtgaaat |
19464850 |
T |
|
| Q |
179 |
tattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttc |
278 |
Q |
| |
|
||||||||||||| ||||| | ||||||||||||||| |||||||||||||| || ||||| |||| ||||| ||| ||| ||||| || ||||||||| |
|
|
| T |
19464849 |
tattgtgatccaagaataatgaggaacaatttagtgttaggttagatatgtcagcagcaatcaaattgtttgataaaaaaagttcataggatattctttc |
19464750 |
T |
|
| Q |
279 |
tataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaag |
378 |
Q |
| |
|
||||||| | || || ||| || |||||| |||| ||||| | ||| ||||||| || || ||| | |||||| ||||||||||| |||||||||||| |
|
|
| T |
19464749 |
tataaggattgaaaagttacttttatctaccaacaaaattgcggagatcgataagtcgagttcttgcaatgacttctgtgtatatattcaagatggaaag |
19464650 |
T |
|
| Q |
379 |
ttt |
381 |
Q |
| |
|
||| |
|
|
| T |
19464649 |
ttt |
19464647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 11 - 381
Target Start/End: Complemental strand, 19400387 - 19399999
Alignment:
| Q |
11 |
cagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctga |
110 |
Q |
| |
|
||||||||||| ||| |||||||||| |||||||||| ||| | || | |||| ||| ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
19400387 |
cagagaggtgtcccagagcttcaccagatagcctattacgccacaggttgatgactcccacttcattcaagttcttccaactatgcggaattgatcctga |
19400288 |
T |
|
| Q |
111 |
gaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaattt |
210 |
Q |
| |
|
||| |||||||||||||||||| || | ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| | |||||||| |
|
|
| T |
19400287 |
gaaaaagttgtaagacaaatcaacatgatagaccattggtgatatgtttgggagtcttcctgtgaaactattgtgatccaaccttaaaattaaacaattt |
19400188 |
T |
|
| Q |
211 |
agtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattggg------------------tattctttctataaggctagaga |
292 |
Q |
| |
|
||||| |||||||||||||||||| |||| ||||| ||||||||| || ||||||||| ||||||||||||||| | |||| |
|
|
| T |
19400187 |
agtgttaggttagatatgtcttcagcaatagaattgtttgacaaaataagttcattgggtatatgcggaggagcagttattctttctataagattcgaga |
19400088 |
T |
|
| Q |
293 |
acttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||| ||||| || ||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19400087 |
acttatttctatctacaaacgaaattcccgagcttgataagtcgagatgttgcagtgacttttgtgtatatatccaagatggaaagttt |
19399999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 9 - 381
Target Start/End: Complemental strand, 19376285 - 19375913
Alignment:
| Q |
9 |
agcagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcct |
108 |
Q |
| |
|
|||||||||||| | ||||||||||||||| |||||||||||||||| ||||| ||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19376285 |
agcagagaggtgagctagaacttcaccagatagcctattactccataggttcaactctttcaattctgacaagttcttccaactatgtggaattgatcca |
19376186 |
T |
|
| Q |
109 |
gagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaat |
208 |
Q |
| |
|
|||||||||||| |||||| |||| ||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||| ||| |||||| |
|
|
| T |
19376185 |
gagaaggagttgaaagacacgtcaacatgattggtcattggtgatatgtttgggagtccacctgtgaaattattgtgatccaaatgtaacaatgaacaag |
19376086 |
T |
|
| Q |
209 |
ttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctat |
308 |
Q |
| |
|
||||| |||||||||||||||||| ||| ||||| ||||||| | ||| | || | |||||||||||||||| | | |||||||||||||||| |
|
|
| T |
19376085 |
aaagtgttaggttagatatgtcttcagaaattgaattgtttgacagaaaaagtacaccgcgtattctttctataagattcgtaaacttatttctatctac |
19375986 |
T |
|
| Q |
309 |
caacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
||| ||||||| |||||| |||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19375985 |
caataaaattcccgagctccataagcggagatcaaacagtgacttttgtgtatatatccaagatggaaagttt |
19375913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 78 - 381
Target Start/End: Complemental strand, 18116559 - 18116256
Alignment:
| Q |
78 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaa |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | || ||||||| |||||||||||||||||| |
|
|
| T |
18116559 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattccataggcaaatgacaatatgtttgggagtcctcctgtgaaa |
18116460 |
T |
|
| Q |
178 |
ctattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattcttt |
277 |
Q |
| |
|
|||||||||||| | || | ||| | |||||| ||||| |||||||||||| |||| ||||| ||||||||||||| |||| |||||||||| |
|
|
| T |
18116459 |
ttattgtgatccagccttaccacgtaaccaattagtgataggtttgatatgtcttcagcaattgaattgtttgacaaataaagttcaaccggtattcttt |
18116360 |
T |
|
| Q |
278 |
ctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaa |
377 |
Q |
| |
|
|||||||| | ||||||| |||||||||| ||| |||||||| | |||||||| || ||| ||| |||| ||| ||||||||||||||||||||||| |
|
|
| T |
18116359 |
ctataaggttcaagaacttctttctatctaccaatgaaattcccgcgctcgatatgtcgagatattgaagtgtcttctgtgtatatatccaagatggaaa |
18116260 |
T |
|
| Q |
378 |
gttt |
381 |
Q |
| |
|
|||| |
|
|
| T |
18116259 |
gttt |
18116256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 82 - 379
Target Start/End: Complemental strand, 18165746 - 18165449
Alignment:
| Q |
82 |
ttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactat |
181 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
18165746 |
ttcttccaactatgtggaattgttcctgagaaggagttgaaagacaaatcaacaaaattggccattggtgatatgtttgggagtcctcctgtgaaattat |
18165647 |
T |
|
| Q |
182 |
tgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctat |
281 |
Q |
| |
|
|||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || || | |||||||||||| |
|
|
| T |
18165646 |
tgtgatccaaacgtaagtcaaaacaatttagtgttaggttagatatgtcttcaacaatcgaattgtttgacaaaataagttgtccagttattctttctat |
18165547 |
T |
|
| Q |
282 |
aaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagt |
379 |
Q |
| |
|
|||| |||||||||| |||||| ||| ||||||||||| ||||||| || ||| ||| ||||| || ||||||||||||||||||||||||| |
|
|
| T |
18165546 |
aaggtccttgaacttatttttatctagcaatgaaattcctgaattcgataagtcgagatcttgcagtgatttctgtgtatatatccaagatggaaagt |
18165449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 69 - 381
Target Start/End: Complemental strand, 19351995 - 19351684
Alignment:
| Q |
69 |
cagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcct |
168 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | | | | | |||||||| ||| ||||||||| |
|
|
| T |
19351995 |
cagttctgacaagttcttccaactatgtggaattgatcttgagaaggagttgtaagataaatcaactatctcagcctctggtgataggtttgggagtcct |
19351896 |
T |
|
| Q |
169 |
cctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgg |
268 |
Q |
| |
|
||||||||| |||||||||||||| ||| ||||||| ||||| |||| |||||||||||| |||| |||| |||||||| | | || || |
|
|
| T |
19351895 |
cctgtgaaattattgtgatccaaccttaactccaaacaattaagtgttaggt-agatatgtcttccgcaatgaaattgtttgacaataatagtttataaa |
19351797 |
T |
|
| Q |
269 |
gtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatcca |
368 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| ||| |||||||| | |||||||| || ||| ||| ||||||||||||||||||||||| |
|
|
| T |
19351796 |
gtattctttctataaggctcgagaacttatttctatctaccaatgaaattcccgtgctcgatatgtcgagattttgcagtgacttttgtgtatatatcca |
19351697 |
T |
|
| Q |
369 |
agatggaaagttt |
381 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
19351696 |
agatggaatgttt |
19351684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 78 - 381
Target Start/End: Complemental strand, 25463644 - 25463341
Alignment:
| Q |
78 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaa |
177 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | | | || |||||||||||| || || ||||||| ||||||| |
|
|
| T |
25463644 |
caagttcttccaaccatgtggaattgatcctgagaaggagttgtaagacatgtcaactatttgggccattggtgatatatttggaagtcctcttgtgaaa |
25463545 |
T |
|
| Q |
178 |
ctattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattcttt |
277 |
Q |
| |
|
||||| |||||||| ||| |||||||||||||| ||||||||||||||| || ||||||||| ||||||||| || | ||||||||| |
|
|
| T |
25463544 |
ttattgcgatccaactctaaccatgaacaatttagtgttaggttagatatgtctccagaaatcgaattgtttgacaaaataagagaaccaggtattcttc |
25463445 |
T |
|
| Q |
278 |
ctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaa |
377 |
Q |
| |
|
| || | ||| || |||||||||||||| | | | |||||||| ||||||||||| || ||| ||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
25463444 |
caatcaagctcgaaaacttatttctatccaccgatgaaattcccgagctcgataagtcgagatattgcagtgacttctgtgtatatatccaagaaggaaa |
25463345 |
T |
|
| Q |
378 |
gttt |
381 |
Q |
| |
|
|||| |
|
|
| T |
25463344 |
gttt |
25463341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 78 - 381
Target Start/End: Complemental strand, 16677804 - 16677510
Alignment:
| Q |
78 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaa |
177 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||| |
|
|
| T |
16677804 |
caagttcttccaactatgtggaattattcccgagaaggagttgtaagacaaatcaactactcgggcaattggtgatatgttcgggagtcctcctgtgaaa |
16677705 |
T |
|
| Q |
178 |
ctattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattcttt |
277 |
Q |
| |
|
|||| ||||||||| ||| |||||||||| ||| ||||||||||||||||| | ||| ||||| ||||||||| || ||| |||||||| |
|
|
| T |
16677704 |
ttattatgatccaaccctaaccatgaacaatttaatgttaggttagatatgtcttcgaaaatggaattgtttgacaaaagaagttccacaaatattcttt |
16677605 |
T |
|
| Q |
278 |
ctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaa |
377 |
Q |
| |
|
|| ||||||| |||||| |||| || ||||| |||||||| ||||| || ||| ||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
16677604 |
ctgtaaggctcgagaac---------tctacgaatgaaatgcctgagcttgataagtcgagatattgcaatgacttttgtgtatatatccatgatggaaa |
16677514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 19461781 - 19461721
Alignment:
| Q |
78 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattcta |
138 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19461781 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaagtcta |
19461721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 19354361 - 19354256
Alignment:
| Q |
26 |
gaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaaga |
125 |
Q |
| |
|
|||| |||||||||| | |||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19354361 |
gaacatcaccagacaacttattactccataggttcaagtttatcagttctttgcagttcttccaactatgtggaattgatcctgagaaggagttgtaaga |
19354262 |
T |
|
| Q |
126 |
caaatc |
131 |
Q |
| |
|
|||||| |
|
|
| T |
19354261 |
caaatc |
19354256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 19439239 - 19439184
Alignment:
| Q |
78 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaa |
133 |
Q |
| |
|
||||||| ||||| ||| ||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
19439239 |
caagttcctccaattatatggaattgatcttgagacggagttgtaagacaaatcaa |
19439184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 72 - 381
Target Start/End: Original strand, 2973 - 3282
Alignment:
| Q |
72 |
ttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcct |
171 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||| ||||||||| ||||||||||| |
|
|
| T |
2973 |
ttctaacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaactattaaggccattgatgatatgtttgggagtcctccc |
3072 |
T |
|
| Q |
172 |
gtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggta |
271 |
Q |
| |
|
||||| |||||||||||||| || | | ||||||||||||| |||||||||||||||||| |||||||||| |||||||||| || |||||||| || |
|
|
| T |
3073 |
ttgaaattattgtgatccaaccttagaaagaaacaatttagtgttaggttagatatgtcttcagcaatcgaattgtttgacaaattaagttcattggata |
3172 |
T |
|
| Q |
272 |
ttctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaaga |
371 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||| |||||||| ||||| ||||||| ||| ||| ||||||||||||||||||||||| | |
|
|
| T |
3173 |
cgctttctataaggctcgagaacttatttctatctaccaatgaaattccagagctggataaatagagatcttgaagtgacttttgtgtatatatccaggc |
3272 |
T |
|
| Q |
372 |
tggaaagttt |
381 |
Q |
| |
|
|| ||||||| |
|
|
| T |
3273 |
tgaaaagttt |
3282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 2912 - 2954
Alignment:
| Q |
11 |
cagagaggtgtgttagaacttcaccagacagcctattactcca |
53 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
2912 |
cagagaggtgtcctagaacttcaccagacagcttattactcca |
2954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 72 - 381
Target Start/End: Complemental strand, 6003 - 5694
Alignment:
| Q |
72 |
ttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcct |
171 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||| ||||||||| ||||||||||| |
|
|
| T |
6003 |
ttctaacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaactattaaggccattgatgatatgtttgggagtcctccc |
5904 |
T |
|
| Q |
172 |
gtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggta |
271 |
Q |
| |
|
||||| |||||||||||||| || | | ||||||||||||| |||||||||||||||||| |||||||||| |||||||||| || |||||||| || |
|
|
| T |
5903 |
ttgaaattattgtgatccaaccttagaaagaaacaatttagtgttaggttagatatgtcttcagcaatcgaattgtttgacaaattaagttcattggata |
5804 |
T |
|
| Q |
272 |
ttctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaaga |
371 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||| |||||||| ||||| ||||||| ||| ||| |||||| |||||||||||||||| | |
|
|
| T |
5803 |
cgctttctataaggctcgagaacttatttctatctaccaatgaaattccagagctggataaatagagatcttgaagtgacgtttgtgtatatatccaggc |
5704 |
T |
|
| Q |
372 |
tggaaagttt |
381 |
Q |
| |
|
|| ||||||| |
|
|
| T |
5703 |
tgaaaagttt |
5694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 6064 - 6022
Alignment:
| Q |
11 |
cagagaggtgtgttagaacttcaccagacagcctattactcca |
53 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
6064 |
cagagaggtgtcctagaacttcaccagacagcttattactcca |
6022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 72 - 381
Target Start/End: Original strand, 3504 - 3812
Alignment:
| Q |
72 |
ttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcct |
171 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||| ||||||||| ||||||||||| |
|
|
| T |
3504 |
ttctaacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaactattaaggccattgatgatatgtttgggagtcctccc |
3603 |
T |
|
| Q |
172 |
gtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggta |
271 |
Q |
| |
|
||||| |||||||||||||| || | | ||||||||||||| |||||||||||||||||| |||||||||| |||||||||| || ||||| || || |
|
|
| T |
3604 |
ttgaaattattgtgatccaaccttagaaagaaacaatttagtgttaggttagatatgtcttcagcaatcgaattgtttgacaaattaagttcatcggata |
3703 |
T |
|
| Q |
272 |
ttctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaaga |
371 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||| |||||||| ||||| ||||||| ||| ||| |||||| |||||||||||||||| | |
|
|
| T |
3704 |
cgctttctataaggctcgagaacttatttctatctaccaatgaaattccagagctggataaatagagatcttgaagtgac-tttgtgtatatatccaggc |
3802 |
T |
|
| Q |
372 |
tggaaagttt |
381 |
Q |
| |
|
|| ||||||| |
|
|
| T |
3803 |
tgaaaagttt |
3812 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 3443 - 3485
Alignment:
| Q |
11 |
cagagaggtgtgttagaacttcaccagacagcctattactcca |
53 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
3443 |
cagagaggtgtcctagaacttcaccagacagcttattactcca |
3485 |
T |
|
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Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 68 - 377
Target Start/End: Original strand, 13666346 - 13666655
Alignment:
| Q |
68 |
ccagttctgacaagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcc |
167 |
Q |
| |
|
|||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||| |||||||| |
|
|
| T |
13666346 |
ccagttctttcaagttcatccaactgtgtggaattgatcctgagaaagagttgtaagacaaatcaattatagcggccattggtgatatgtttgggagtcc |
13666445 |
T |
|
| Q |
168 |
tcctgtgaaactattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattg |
267 |
Q |
| |
|
||||||||| |||||||||||||| ||| | ||||||| | ||| | |||||||||||||||| ||| ||||| ||||||||||||| ||| | |
|
|
| T |
13666446 |
tcctgtgaagttattgtgatccaaccttaagtcgaaacaattcattgttaagttagatatgtcttcagaaattgaattctttgacaaataaagctcaaag |
13666545 |
T |
|
| Q |
268 |
-ggtattctttctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatc |
366 |
Q |
| |
|
|||| | ||||||||||||| |||||||||||| | |||| | | |||||||| ||||||||||| | |||| ||| |||||||||||||| |||||| |
|
|
| T |
13666546 |
tggta-tgtttctataaggcttgagaacttatttttgtctacctatgaaattccggagctcgataagttgagaacttgcagtgacttttgtgtgtatatc |
13666644 |
T |
|
| Q |
367 |
caagatggaaa |
377 |
Q |
| |
|
|| |||||||| |
|
|
| T |
13666645 |
catgatggaaa |
13666655 |
T |
|
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Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 381
Target Start/End: Complemental strand, 15536196 - 15535824
Alignment:
| Q |
9 |
agcagagaggtgtgttagaacttcaccagacagcctattactccatacattcaagacttccagttctgacaagttcttccaactatgtggaattgatcct |
108 |
Q |
| |
|
|||||||||||| || ||||||||||||||| |||||| |||| | |||| |||| || ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
15536196 |
agcagagaggtgcattggaacttcaccagacaaactattattccacaggttcatgactgtcaattcattcaagttcttccaactatgtggaattgatcct |
15536097 |
T |
|
| Q |
109 |
gagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtgatccaacaataaagtggaacaat |
208 |
Q |
| |
|
||||||||||||||||| ||||||| || | ||||||||||||| |||||||||||||| || ||||||| |||||| ||| ||| || |
|
|
| T |
15536096 |
gagaaggagttgtaagaaaaatcaaccataacaacccttggtgatatgtttgggagtcctcctgtataattattgtggtccaaccttaactccaaaccat |
15535997 |
T |
|
| Q |
209 |
ttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataaggctagagaacttatttctatctat |
308 |
Q |
| |
|
| | ||| |||||||||||||||||| |||| |||| ||||||||| ||| || || ||||||||||| |||||| | |||||||||| ||| |||| |
|
|
| T |
15535996 |
taactgttaggttagatatgtcttcagcaatgaaattgtttgacaaaaaaagtttatcgggtattcttttaataaggtttgagaacttatctctgtctac |
15535897 |
T |
|
| Q |
309 |
caacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
|| |||||||| ||||||||||| || |||| || |||| |||||||||||||||||||||||||||||| |
|
|
| T |
15535896 |
taatgaaattcccgagctcgataagtcgagaacatgcagtgttttttgtgtatatatccaagatggaaagttt |
15535824 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 78 - 381
Target Start/End: Original strand, 2709985 - 2710285
Alignment:
| Q |
78 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaa-ttctattggacattggtgatatgttcgggagtcctcctgtgaa |
176 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||||||| || |
|
|
| T |
2709985 |
caagttcttccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaacttcaagtgc-cattggtgatatgtttgggagtcctcctgtaaa |
2710083 |
T |
|
| Q |
177 |
actattgtgatccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctt |
276 |
Q |
| |
|
| ||||||| |||| | || || || |||| || || || ||||||||||| || ||||| | ||| ||| ||| || ||||||| | |
|
|
| T |
2710084 |
attattgtggtccatccttattatgtcacccattagagttagatttgatatgtcttcggttattgaattgtatgataaacaaa---caaaaggtattcct |
2710180 |
T |
|
| Q |
277 |
tctataaggctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaa |
376 |
Q |
| |
|
|||||||| || ||||||||||||||||||| | |||||||||||||||||||| || |||| ||| | ||| ||||||||| ||||||||||||||| |
|
|
| T |
2710181 |
tctataagtcttgagaacttatttctatctacggaggaaattcctgagctcgataagtcgagaaattgcaatgatttttgtgtacatatccaagatggaa |
2710280 |
T |
|
| Q |
377 |
agttt |
381 |
Q |
| |
|
||||| |
|
|
| T |
2710281 |
agttt |
2710285 |
T |
|
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Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 381
Target Start/End: Complemental strand, 8460131 - 8459839
Alignment:
| Q |
86 |
tccaactatgtggaattgatcctgagaaggagttgtaagacaaatcaattctattggacattggtgatatgttcgggagtcctcctgtgaaactattgtg |
185 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| | | | | | ||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
8460131 |
tccaaatatgtggaattgatcctgagaaggagttgtaagacaaatcaactaggtcagtccctactgatatgtttgggagtcctcctgtgaaattattgtg |
8460032 |
T |
|
| Q |
186 |
atccaacaataaagtggaacaatttagtgtaaggttagatatgtcttcaacaatcgaattatttgacaaataaatttcattgggtattctttctataagg |
285 |
Q |
| |
|
||||| | ||| | | ||| || || || |||||||||||| |||||||||| ||||||||||||| | ||| ||||| ||||||||| |
|
|
| T |
8460031 |
atccagccatatttcatatcccaatagcgttagatttgatatgtcttcagcaatcgaattgtttgacaaataaagattatt---tattccttctataaga |
8459935 |
T |
|
| Q |
286 |
ctagagaacttatttctatctatcaacgaaattcctgagctcgataaatcaagaagttgtagtgacttttgtgtatatatccaagatggaaagttt |
381 |
Q |
| |
|
||| | || ||||||||||||| ||| |||||||| |||||||||| || | || |||||| || |||||||| |||||||||||||||||| |
|
|
| T |
8459934 |
ctaaaaaatttatttctatctaccaatgaaattcccgagctcgatatgtctaattcttctagtgatttctgtgtataaatccaagatggaaagttt |
8459839 |
T |
|
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