View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13296_low_15 (Length: 305)

Name: NF13296_low_15
Description: NF13296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13296_low_15
NF13296_low_15
[»] chr3 (54 HSPs)
chr3 (69-305)||(7045230-7045466)
chr3 (69-204)||(51362367-51362503)
chr3 (69-204)||(19385244-19385380)
chr3 (71-202)||(50754008-50754140)
chr3 (73-191)||(52987583-52987702)
chr3 (69-200)||(16277343-16277475)
chr3 (69-204)||(8718101-8718237)
chr3 (69-204)||(9069988-9070124)
chr3 (69-204)||(39099189-39099333)
chr3 (89-178)||(23699354-23699443)
chr3 (89-178)||(23717809-23717898)
chr3 (89-178)||(23736265-23736354)
chr3 (105-162)||(17627197-17627254)
chr3 (89-204)||(23755285-23755394)
chr3 (139-207)||(47335029-47335098)
chr3 (139-206)||(9595980-9596048)
chr3 (139-205)||(19284670-19284737)
chr3 (139-204)||(3475407-3475473)
chr3 (139-204)||(46237758-46237824)
chr3 (139-207)||(2941926-2941995)
chr3 (139-203)||(33414013-33414078)
chr3 (142-205)||(54379162-54379226)
chr3 (158-197)||(19384383-19384422)
chr3 (158-197)||(51361525-51361564)
chr3 (139-204)||(9106267-9106333)
chr3 (139-204)||(26662538-26662604)
chr3 (144-201)||(51846785-51846843)
chr3 (142-205)||(30947914-30947978)
chr3 (158-198)||(50755195-50755235)
chr3 (158-197)||(3475301-3475340)
chr3 (158-197)||(6097578-6097617)
chr3 (139-205)||(6097684-6097751)
chr3 (158-197)||(8719140-8719179)
chr3 (158-197)||(9071027-9071066)
chr3 (158-197)||(9106400-9106439)
chr3 (158-197)||(9595874-9595913)
chr3 (158-197)||(10986485-10986524)
chr3 (158-197)||(19012565-19012604)
chr3 (158-197)||(19284804-19284843)
chr3 (158-197)||(30947805-30947844)
chr3 (158-197)||(34562401-34562440)
chr3 (158-197)||(41191411-41191450)
chr3 (139-178)||(47728415-47728454)
chr3 (167-198)||(49053226-49053257)
chr3 (139-178)||(53594995-53595034)
chr3 (158-197)||(54379295-54379334)
chr3 (158-196)||(2941821-2941859)
chr3 (167-197)||(16653499-16653529)
chr3 (163-197)||(17620738-17620772)
chr3 (167-197)||(19012394-19012424)
chr3 (144-201)||(34563352-34563410)
chr3 (144-201)||(41192355-41192413)
chr3 (158-198)||(27446216-27446256)
chr3 (158-198)||(47924369-47924409)
[»] chr1 (46 HSPs)
chr1 (69-205)||(18056783-18056920)
chr1 (69-205)||(22348038-22348175)
chr1 (69-204)||(45889596-45889732)
chr1 (69-204)||(23320014-23320158)
chr1 (89-205)||(16115850-16115966)
chr1 (73-162)||(30802438-30802528)
chr1 (69-162)||(179650-179744)
chr1 (69-204)||(8402240-8402369)
chr1 (89-204)||(37639341-37639457)
chr1 (89-204)||(35198131-35198247)
chr1 (139-204)||(23921898-23921963)
chr1 (142-204)||(4097911-4097974)
chr1 (139-205)||(11421593-11421660)
chr1 (139-205)||(24635925-24635992)
chr1 (139-205)||(50351802-50351869)
chr1 (139-204)||(16975954-16976020)
chr1 (139-204)||(25889028-25889094)
chr1 (139-204)||(28375464-28375530)
chr1 (139-204)||(34369660-34369726)
chr1 (139-204)||(49936937-49937003)
chr1 (139-206)||(18618833-18618901)
chr1 (139-205)||(48762331-48762398)
chr1 (139-204)||(19897760-19897826)
chr1 (139-204)||(20434722-20434788)
chr1 (144-201)||(21256777-21256835)
chr1 (139-204)||(43452542-43452608)
chr1 (142-201)||(23175525-23175585)
chr1 (142-204)||(6314115-6314178)
chr1 (158-197)||(6314249-6314288)
chr1 (158-197)||(12070613-12070652)
chr1 (158-197)||(16976088-16976127)
chr1 (158-197)||(17811286-17811325)
chr1 (158-197)||(23174404-23174443)
chr1 (158-197)||(23817443-23817482)
chr1 (158-197)||(24636059-24636098)
chr1 (158-197)||(32595106-32595145)
chr1 (158-197)||(43452675-43452714)
chr1 (158-197)||(48762225-48762264)
chr1 (158-197)||(49936831-49936870)
chr1 (158-196)||(45849312-45849350)
chr1 (164-197)||(19897654-19897687)
chr1 (139-176)||(31529665-31529702)
chr1 (139-176)||(33097434-33097471)
chr1 (139-176)||(44260547-44260584)
chr1 (117-205)||(19841485-19841573)
chr1 (140-176)||(51801734-51801770)
[»] chr8 (46 HSPs)
chr8 (69-204)||(32987374-32987510)
chr8 (69-209)||(39021970-39022111)
chr8 (71-204)||(7058114-7058248)
chr8 (69-200)||(4836630-4836762)
chr8 (69-200)||(4842075-4842207)
chr8 (73-204)||(15260784-15260917)
chr8 (69-176)||(7614096-7614204)
chr8 (69-176)||(8550532-8550640)
chr8 (108-204)||(1208709-1208805)
chr8 (89-176)||(15181819-15181906)
chr8 (139-204)||(42433701-42433766)
chr8 (139-207)||(19784268-19784337)
chr8 (139-204)||(10237354-10237420)
chr8 (139-204)||(41099182-41099248)
chr8 (139-204)||(43690640-43690706)
chr8 (144-207)||(34648133-34648197)
chr8 (158-197)||(10237487-10237526)
chr8 (139-205)||(15227029-15227096)
chr8 (158-197)||(34647173-34647212)
chr8 (158-197)||(39023002-39023041)
chr8 (137-204)||(40012180-40012247)
chr8 (144-201)||(9852273-9852331)
chr8 (139-204)||(30413914-30413980)
chr8 (139-204)||(34633321-34633387)
chr8 (139-204)||(41451105-41451171)
chr8 (69-128)||(2750101-2750161)
chr8 (144-201)||(35302591-35302649)
chr8 (158-197)||(1149917-1149956)
chr8 (158-197)||(4835520-4835559)
chr8 (139-205)||(7857679-7857746)
chr8 (158-197)||(23567646-23567685)
chr8 (158-197)||(24473247-24473286)
chr8 (158-197)||(34633215-34633254)
chr8 (158-197)||(35301631-35301670)
chr8 (158-197)||(39657710-39657749)
chr8 (158-197)||(40022390-40022429)
chr8 (158-196)||(1209789-1209827)
chr8 (137-178)||(12355449-12355490)
chr8 (257-305)||(39849240-39849289)
chr8 (117-157)||(1671850-1671890)
chr8 (165-197)||(15227170-15227202)
chr8 (117-205)||(17061471-17061559)
chr8 (117-205)||(17221106-17221194)
chr8 (117-205)||(17586799-17586887)
chr8 (158-198)||(27506707-27506747)
chr8 (257-304)||(36952041-36952089)
[»] chr7 (43 HSPs)
chr7 (69-204)||(30428873-30429009)
chr7 (69-205)||(46573429-46573564)
chr7 (73-204)||(46024027-46024159)
chr7 (69-204)||(15974865-15975001)
chr7 (69-169)||(33797966-33798067)
chr7 (89-204)||(5757386-5757502)
chr7 (108-204)||(48690895-48690991)
chr7 (105-206)||(12279743-12279844)
chr7 (105-204)||(12279641-12279740)
chr7 (108-204)||(28396722-28396818)
chr7 (89-175)||(32090607-32090693)
chr7 (117-204)||(48305237-48305323)
chr7 (139-204)||(25778837-25778902)
chr7 (108-158)||(48691038-48691088)
chr7 (117-205)||(44141229-44141318)
chr7 (139-205)||(41911109-41911176)
chr7 (139-204)||(763697-763763)
chr7 (139-204)||(16933244-16933310)
chr7 (139-204)||(16938627-16938693)
chr7 (139-204)||(20000674-20000740)
chr7 (139-204)||(30884222-30884288)
chr7 (139-204)||(31660069-31660135)
chr7 (139-204)||(46358520-46358586)
chr7 (139-218)||(47340132-47340213)
chr7 (158-197)||(11732044-11732083)
chr7 (139-201)||(11732647-11732710)
chr7 (158-197)||(16933137-16933176)
chr7 (158-197)||(16938520-16938559)
chr7 (135-178)||(27335625-27335667)
chr7 (158-197)||(30884116-30884155)
chr7 (158-197)||(31660202-31660241)
chr7 (158-197)||(34227879-34227918)
chr7 (158-197)||(35737081-35737120)
chr7 (158-197)||(41911006-41911045)
chr7 (135-178)||(46346712-46346755)
chr7 (158-197)||(46358653-46358692)
chr7 (158-197)||(47340280-47340319)
chr7 (158-197)||(48692053-48692092)
chr7 (158-197)||(48830602-48830641)
chr7 (144-201)||(24359874-24359932)
chr7 (167-197)||(26945516-26945546)
chr7 (139-176)||(34875518-34875555)
chr7 (165-197)||(33798743-33798775)
[»] chr2 (29 HSPs)
chr2 (74-205)||(18298045-18298177)
chr2 (69-205)||(25192891-25193028)
chr2 (69-204)||(20709774-20709910)
chr2 (108-203)||(14551288-14551382)
chr2 (89-165)||(4281738-4281814)
chr2 (108-186)||(4579787-4579865)
chr2 (89-204)||(25995286-25995402)
chr2 (139-208)||(39355031-39355101)
chr2 (112-176)||(5098745-5098809)
chr2 (143-205)||(2263572-2263635)
chr2 (139-205)||(15016566-15016633)
chr2 (139-204)||(7487254-7487320)
chr2 (139-206)||(8149829-8149897)
chr2 (139-206)||(8154453-8154521)
chr2 (158-197)||(15016460-15016499)
chr2 (139-204)||(1292179-1292245)
chr2 (139-204)||(9143585-9143651)
chr2 (144-201)||(41346045-41346103)
chr2 (144-204)||(18762867-18762928)
chr2 (139-202)||(34464713-34464777)
chr2 (89-149)||(43822409-43822469)
chr2 (158-197)||(1292073-1292112)
chr2 (158-197)||(7487148-7487187)
chr2 (158-197)||(34726799-34726838)
chr2 (158-197)||(39355168-39355207)
chr2 (158-197)||(41345089-41345128)
chr2 (167-197)||(20194039-20194069)
chr2 (117-162)||(36636915-36636960)
chr2 (158-198)||(19246663-19246703)
[»] chr5 (28 HSPs)
chr5 (69-204)||(28070082-28070218)
chr5 (69-202)||(13362772-13362906)
chr5 (69-204)||(23335636-23335772)
chr5 (101-202)||(25017179-25017280)
chr5 (88-176)||(16668743-16668831)
chr5 (108-204)||(34329127-34329223)
chr5 (69-175)||(2826996-2827103)
chr5 (89-175)||(18465506-18465592)
chr5 (89-162)||(8948932-8949003)
chr5 (139-206)||(15416662-15416730)
chr5 (132-204)||(42512200-42512271)
chr5 (139-204)||(13552983-13553049)
chr5 (139-204)||(26637837-26637903)
chr5 (158-197)||(13553116-13553155)
chr5 (139-204)||(14394468-14394534)
chr5 (139-200)||(14940356-14940418)
chr5 (139-204)||(30783435-30783501)
chr5 (112-204)||(33868155-33868248)
chr5 (158-197)||(3883929-3883968)
chr5 (142-204)||(3884038-3884101)
chr5 (158-197)||(14394601-14394640)
chr5 (158-197)||(14940250-14940289)
chr5 (158-197)||(26637731-26637770)
chr5 (139-205)||(37456679-37456746)
chr5 (167-197)||(5411768-5411798)
chr5 (168-197)||(36864069-36864098)
chr5 (140-176)||(4674989-4675025)
chr5 (158-198)||(39086709-39086749)
[»] chr4 (59 HSPs)
chr4 (69-204)||(27764240-27764376)
chr4 (69-204)||(45255975-45256111)
chr4 (69-200)||(36621630-36621762)
chr4 (69-201)||(22181174-22181307)
chr4 (69-204)||(26447341-26447477)
chr4 (69-202)||(38485603-38485733)
chr4 (69-204)||(21097140-21097276)
chr4 (69-175)||(637883-637990)
chr4 (69-176)||(4168386-4168494)
chr4 (89-204)||(50563679-50563794)
chr4 (85-204)||(51837037-51837155)
chr4 (139-204)||(50643743-50643808)
chr4 (139-202)||(29826606-29826669)
chr4 (128-201)||(1729604-1729678)
chr4 (139-205)||(1621874-1621941)
chr4 (117-171)||(6386519-6386573)
chr4 (139-204)||(10472497-10472563)
chr4 (139-204)||(13635725-13635791)
chr4 (139-204)||(15051136-15051202)
chr4 (139-204)||(30597699-30597765)
chr4 (139-204)||(36011843-36011909)
chr4 (139-204)||(46672439-46672505)
chr4 (139-204)||(49492512-49492578)
chr4 (139-204)||(51921265-51921331)
chr4 (142-205)||(49426060-49426124)
chr4 (139-204)||(11785974-11786040)
chr4 (139-204)||(11798141-11798207)
chr4 (139-204)||(26578189-26578255)
chr4 (139-204)||(35291548-35291614)
chr4 (139-204)||(55765481-55765547)
chr4 (92-136)||(48077817-48077861)
chr4 (156-204)||(48077862-48077910)
chr4 (158-198)||(49492405-49492445)
chr4 (158-197)||(2124548-2124587)
chr4 (158-197)||(10473651-10473690)
chr4 (158-197)||(11786107-11786146)
chr4 (158-197)||(11798274-11798313)
chr4 (158-197)||(12722941-12722980)
chr4 (158-197)||(13635619-13635658)
chr4 (158-197)||(15051030-15051069)
chr4 (158-197)||(22180208-22180247)
chr4 (139-205)||(25574128-25574195)
chr4 (158-197)||(26577263-26577302)
chr4 (158-197)||(30358840-30358879)
chr4 (158-197)||(30597832-30597871)
chr4 (158-197)||(33883296-33883335)
chr4 (158-197)||(45256898-45256937)
chr4 (158-197)||(49425951-49425990)
chr4 (158-197)||(50644673-50644712)
chr4 (142-204)||(53441320-53441383)
chr4 (158-196)||(638997-639035)
chr4 (139-204)||(27865737-27865803)
chr4 (144-201)||(30357810-30357868)
chr4 (168-197)||(4169441-4169470)
chr4 (144-200)||(38010145-38010202)
chr4 (158-198)||(8157292-8157332)
chr4 (73-112)||(18923351-18923391)
chr4 (139-202)||(38244946-38245010)
chr4 (169-197)||(47219293-47219321)
[»] scaffold0238 (1 HSPs)
scaffold0238 (69-204)||(25161-25297)
[»] scaffold0097 (1 HSPs)
scaffold0097 (69-204)||(13613-13749)
[»] chr6 (27 HSPs)
chr6 (69-204)||(33346300-33346436)
chr6 (105-205)||(34399640-34399740)
chr6 (69-174)||(24737620-24737726)
chr6 (89-204)||(29157226-29157341)
chr6 (106-204)||(15034942-15035040)
chr6 (89-175)||(18611218-18611304)
chr6 (69-162)||(877250-877344)
chr6 (129-204)||(35119239-35119310)
chr6 (146-201)||(12394387-12394442)
chr6 (139-205)||(31216661-31216728)
chr6 (139-204)||(1449542-1449608)
chr6 (139-204)||(1536896-1536962)
chr6 (139-203)||(34870086-34870151)
chr6 (158-197)||(31216795-31216834)
chr6 (139-200)||(6900807-6900869)
chr6 (139-204)||(7089082-7089148)
chr6 (144-201)||(30908655-30908713)
chr6 (158-197)||(6900936-6900975)
chr6 (147-201)||(7764444-7764499)
chr6 (158-197)||(7765407-7765446)
chr6 (158-197)||(15493307-15493346)
chr6 (158-197)||(25119108-25119147)
chr6 (117-204)||(28116828-28116915)
chr6 (158-197)||(34869957-34869996)
chr6 (171-204)||(2759826-2759859)
chr6 (169-197)||(21384791-21384819)
chr6 (158-190)||(29163720-29163752)
[»] scaffold0194 (1 HSPs)
scaffold0194 (69-204)||(27607-27743)
[»] scaffold0544 (1 HSPs)
scaffold0544 (106-203)||(10642-10739)
[»] scaffold0337 (1 HSPs)
scaffold0337 (105-201)||(7020-7116)
[»] scaffold0189 (1 HSPs)
scaffold0189 (142-204)||(11193-11255)
[»] scaffold0571 (2 HSPs)
scaffold0571 (139-205)||(676-743)
scaffold0571 (158-197)||(547-586)
[»] scaffold0045 (1 HSPs)
scaffold0045 (139-205)||(33683-33750)
[»] scaffold0581 (1 HSPs)
scaffold0581 (139-205)||(8421-8488)
[»] scaffold0074 (3 HSPs)
scaffold0074 (144-206)||(24272-24335)
scaffold0074 (158-197)||(24407-24446)
scaffold0074 (167-197)||(44784-44814)
[»] scaffold0102 (1 HSPs)
scaffold0102 (167-197)||(33828-33858)
[»] scaffold0338 (1 HSPs)
scaffold0338 (158-198)||(6516-6556)


Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 69 - 305
Target Start/End: Original strand, 7045230 - 7045466
Alignment:
Q  69 aatgtttgaagcaaataagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacgg 168  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7045230 aatgtttgaagcaaataagtttgatttgatgtagtctgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacgg 7045329  T
Q  169 tgcataagaatttccttatgcaccataacttttgccgaaagtaaggtgataatactagcaaccatgaatactatatcaattattgcataatattttacct 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7045330 tgcataagaatttccttatgcaccataacttttgccgaaagtaaggtgataatactagcaaccatgaatactatatcaattattgcataatattttacct 7045429  T
Q  269 gatgcaagttgcaaattaagattcagataatagcttt 305  Q
    |||||||||||||||||||||||||||||||||||||    
T  7045430 gatgcaagttgcaaattaagattcagataatagcttt 7045466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 51362367 - 51362503
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  51362367 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactaaatctgatggttgtgaagtgtttatgcacg 51362466  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  51362467 gtgcataaggatttccttatgcaccataacttttgcc 51362503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 19385244 - 19385380
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  19385244 aatgattgaagcaaatgaagtttgatttgatgtagtttgagaagcctagaattattacacgtgtacactaaatctgatggttgtgaagtgtttatgcacg 19385343  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19385344 gtgcataaggatttccttatgcaccataacttttgcc 19385380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 71 - 202
Target Start/End: Complemental strand, 50754140 - 50754008
Alignment:
Q  71 tgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggt 169  Q
    |||||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50754140 tgtttgaatcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggt 50754041  T
Q  170 gcataagaatttccttatgcaccataacttttg 202  Q
    ||||||| ||||||||||| |||||||||||||    
T  50754040 gcataaggatttccttatgtaccataacttttg 50754008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 52987583 - 52987702
Alignment:
Q  73 tttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgc 171  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52987583 tttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgc 52987682  T
Q  172 ataagaatttccttatgcac 191  Q
    ||||| ||||||||||||||    
T  52987683 ataaggatttccttatgcac 52987702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 16277343 - 16277475
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  16277343 aatgtttgaaacaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatatgatggttgtgaagtgtttatgcacg 16277442  T
Q  168 gtgcataagaatttccttatgcaccataacttt 200  Q
    ||||||||  |||||||||||||||||||||||    
T  16277443 gtgcataaagatttccttatgcaccataacttt 16277475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 8718237 - 8718101
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||| || ||||| |||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||  |||    
T  8718237 aatgttttaaacaaatgaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatggttgtgaagtatttatgtacg 8718138  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  8718137 gtgcataaggatttccttatgcaccataacttttgcc 8718101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 9070124 - 9069988
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||| || ||||| |||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||  |||    
T  9070124 aatgttttaaacaaatgaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatggttgtgaagtatttatgtacg 9070025  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  9070024 gtgcataaggatttccttatgcaccataacttttgcc 9069988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 39099333 - 39099189
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||| || ||||| |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  39099333 aatgttttaaacaaatgaagtttgatttagtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaaatatttatgcacg 39099234  T
Q  168 gtgca--------taagaatttccttatgcaccataacttttgcc 204  Q
    |||||        ||||||||| ||||||||||||||||||||||    
T  39099233 gtgcataaggaaataagaattttcttatgcaccataacttttgcc 39099189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 23699443 - 23699354
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaa 178  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| || |||| |||||||    
T  23699443 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgcagggtgtataagaa 23699354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 23717898 - 23717809
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaa 178  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| || |||| |||||||    
T  23717898 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgcagggtgtataagaa 23717809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 23736354 - 23736265
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaa 178  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| || |||| |||||||    
T  23736354 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgcagggtgtataagaa 23736265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 17627197 - 17627254
Alignment:
Q  105 tgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttat 162  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  17627197 tgagaaacctagaattattacacgtgtacactagatctgatggttgtgaagtgtttat 17627254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 23755394 - 23755285
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttat 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| |||       ||||||||||||||||| || ||||||||| ||| |  |||||    
T  23755394 ttgatttgatgtaatttgagaagcctaggattattacacgtgtacattag-------ggttgtgaagtgtttatgcagggtgcataaggaaatgtcttat 23755302  T
Q  188 gcaccataacttttgcc 204  Q
    |||  ||||||||||||    
T  23755301 gcataataacttttgcc 23755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 47335098 - 47335029
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccgaa 207  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||||    
T  47335098 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccgaa 47335029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 9595980 - 9596048
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccga 206  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||||    
T  9595980 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgccga 9596048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 19284737 - 19284670
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  19284737 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 19284670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 3475407 - 3475473
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  3475407 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 3475473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 46237758 - 46237824
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  46237758 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46237824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 2941926 - 2941995
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccgaa 207  Q
    ||||||||||||||| |||||||| |||||| ||||| ||| |  |||||||||||||||||||||||||    
T  2941926 atctgatggttgtgatgtgtttatgcacggtacataaggaaataacttatgcaccataacttttgccgaa 2941995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 33414013 - 33414078
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgc 203  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||    
T  33414013 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgc 33414078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 54379226 - 54379162
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    |||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  54379226 tgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 54379162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 19384422 - 19384383
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  19384422 tttatgcacggtgcataagaatttccttatgcaccataac 19384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 51361564 - 51361525
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  51361564 tttatacacggtgcataaggatttccttatgcaccataac 51361525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 9106333 - 9106267
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||| | |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  9106333 atctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 9106267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 26662538 - 26662604
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||| ||||||||||||    
T  26662538 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcacaataacttttgcc 26662604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 51846785 - 51846843
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataactttt 201  Q
    ||||||||||||||||||| |||||||||||| ||| |  |||||||||||||||||||    
T  51846785 atggttgtgaagtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 51846843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 30947914 - 30947978
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||| |||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  30947914 tgatgattgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgccg 30947978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 50755195 - 50755235
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  50755195 tttatgcacggtgcataaggatttccttatgcaccataact 50755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 3475340 - 3475301
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  3475340 tttatgcacggtgcataaggatttccttatgcaccataac 3475301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 6097617 - 6097578
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  6097617 tttatgcacggtgcataaggatttccttatgcaccataac 6097578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 6097684 - 6097751
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgccg 205  Q
    ||||||| ||| ||| |||||||| ||||||||||||| || |  |||||||||||||||||||||||    
T  6097684 atctgatagttatgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 6097751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 8719140 - 8719179
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  8719140 tttatgcacggtgcataaggatttccttatgcaccataac 8719179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 9071027 - 9071066
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  9071027 tttatgcacggtgcataaggatttccttatgcaccataac 9071066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 9106400 - 9106439
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  9106400 tttatgcacggtgcataaggatttccttatgcaccataac 9106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 9595913 - 9595874
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  9595913 tttatgcacggtgcataaggatttccttatgcaccataac 9595874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 10986485 - 10986524
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  10986485 tttatgcacggtgcataaggatttccttatgcaccataac 10986524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 19012565 - 19012604
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  19012565 tttatgcagggtgcataagaatttccttatgcaccataac 19012604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 19284804 - 19284843
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  19284804 tttatgcacggtgcataaggatttccttatgcaccataac 19284843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 30947844 - 30947805
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  30947844 tttatgcacggtgcataaggatttccttatgcaccataac 30947805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 34562440 - 34562401
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  34562440 tttatgcacggtgcataaggatttccttatgcaccataac 34562401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 41191450 - 41191411
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  41191450 tttatgcacggtgcataagaatttccctatgcaccataac 41191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 47728454 - 47728415
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataagaa 178  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  47728454 atctgatggttgtgaagtgtttatgcagggtgcataagaa 47728415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 198
Target Start/End: Complemental strand, 49053257 - 49053226
Alignment:
Q  167 ggtgcataagaatttccttatgcaccataact 198  Q
    ||||||||||||||||||||||||||||||||    
T  49053257 ggtgcataagaatttccttatgcaccataact 49053226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 53595034 - 53594995
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataagaa 178  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  53595034 atctgatggttgtgaagtgtttatgcagggtgcataagaa 53594995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 54379295 - 54379334
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  54379295 tttatgcacggtgcataaggatttccttatgcaccataac 54379334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 2941859 - 2941821
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataa 196  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  2941859 tttatgcacggtgcataaggatttccttatgcaccataa 2941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 197
Target Start/End: Complemental strand, 16653529 - 16653499
Alignment:
Q  167 ggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||||    
T  16653529 ggtgcataagaatttccttatgcaccataac 16653499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 17620772 - 17620738
Alignment:
Q  163 acacggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||| ||||||||||||||||||||    
T  17620772 acacggtgcataaggatttccttatgcaccataac 17620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 197
Target Start/End: Complemental strand, 19012424 - 19012394
Alignment:
Q  167 ggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||||    
T  19012424 ggtgcataagaatttccttatgcaccataac 19012394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 34563352 - 34563410
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataactttt 201  Q
    ||||||||||| ||||||| ||||||||||||| || |  |||||||||||||||||||    
T  34563352 atggttgtgaaatgtttatgcacggtgcataagaaaatggcttatgcaccataactttt 34563410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 41192355 - 41192413
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataactttt 201  Q
    |||||||||||||||||||  ||||||||||| ||| |  |||||||||||||||||||    
T  41192355 atggttgtgaagtgtttatgtacggtgcataaggaaatgacttatgcaccataactttt 41192413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 27446216 - 27446256
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  27446216 tttatgcaaggtgcataaggatttccttatgcaccataact 27446256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 47924369 - 47924409
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  47924369 tttatgcagggtgcataaggatttccttatgcaccataact 47924409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 8e-58; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 18056920 - 18056783
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18056920 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacg 18056821  T
Q  168 gtgcataagaatttccttatgcaccataacttttgccg 205  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  18056820 gtgcataaggatttccttatgcaccataacttttgccg 18056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 22348175 - 22348038
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  22348175 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatatgatggttgtgaagtgtttatgcgcg 22348076  T
Q  168 gtgcataagaatttccttatgcaccataacttttgccg 205  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  22348075 gtgcataaggatttccttatgcaccataacttttgccg 22348038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 45889732 - 45889596
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||||||| |||| || ||||||||| |||||||||||||||||| ||||||||||| |||| |||||||||||||||||| || ||||||| ||||    
T  45889732 aatgtttgaaggaaatgaaatttgatttggtgtagtttgagaagcctaagattattacacatgtatactagatctgatggttgtaaaatgtttatgcacg 45889633  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||| |||||||||||||||||||||||| ||||||||    
T  45889632 gtggataagaatttccttatgcaccataccttttgcc 45889596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 23320014 - 23320158
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||| |||||||| |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| || |    
T  23320014 aatgtttaaagcaaatgaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcatg 23320113  T
Q  168 --------gtgcataagaatttccttatgcaccataacttttgcc 204  Q
            | ||||||| |||||||||||||||||||||||||||    
T  23320114 atacctaagagcataaggatttccttatgcaccataacttttgcc 23320158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 16115966 - 16115850
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatg 188  Q
    |||||||| |||||||| ||||| ||  |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  16115966 ttgatttggtgtagtttaagaagtcttggattattacacgtgtacattagatttgatggttgtgaagtgtttatgcacggtgcataaggatttccttatg 16115867  T
Q  189 caccataacttttgccg 205  Q
    ||  |||||||||||||    
T  16115866 catgataacttttgccg 16115850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 30802528 - 30802438
Alignment:
Q  73 tttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttat 162  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  30802528 tttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaagattattacacgtgtacactagatctgatggttgtgaaatgtttat 30802438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 179744 - 179650
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttat 162  Q
    ||||||| |||||||| |||||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  179744 aatgttttaagcaaatgaagtttgatttggtgtagtttgagaagcttgggattattacacgtgtacactagatctgatggttgtgaagtgtttat 179650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 8402240 - 8402369
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||||||||| || |||||||||||| | ||||||||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||          
T  8402240 aatgtttgaagcagatgaagtttgatttggtttagtttgagaaacctaggattattacatgtgtacactagatctgatggttatgaagtgttta------ 8402333  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
     ||||||| ||||||||||| ||||||||||||||||    
T  8402334 -tgcataaaaatttccttatccaccataacttttgcc 8402369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 37639457 - 37639341
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttat 187  Q
    |||||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |  |||||    
T  37639457 ttgatttggtgtagtttgagaagtctataattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttat 37639358  T
Q  188 gcaccataacttttgcc 204  Q
    |||  ||||||||||||    
T  37639357 gcataataacttttgcc 37639341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 35198131 - 35198247
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttat 187  Q
    |||||||  |||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||| |  |||||    
T  35198131 ttgattttgtgtagtttgaaaagtctaggattattacacgtgtacactagatctgatggctgtgaagtgtttatgcagggtgcataaggaaatgtcttat 35198230  T
Q  188 gcaccataacttttgcc 204  Q
    |||  ||||||||||||    
T  35198231 gcataataacttttgcc 35198247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 23921898 - 23921963
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||| ||||||| |||| |||| |||||||| |||||||||||||| ||||||||||||    
T  23921898 atctgatggttatgaagtgcttatgcacgatgcataaggatttccttatgcacaataacttttgcc 23921963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 4097911 - 4097974
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  4097911 tgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 4097974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 11421660 - 11421593
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgccg 205  Q
    |||||||||||||||||||||||| ||||||||||||| || |   ||||||||||||||||||||||    
T  11421660 atctgatggttgtgaagtgtttatgcacggtgcataaggaaatgatttatgcaccataacttttgccg 11421593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 24635992 - 24635925
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  24635992 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 24635925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 50351869 - 50351802
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  50351869 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgccg 50351802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 16976020 - 16975954
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |  |||||| |||||||||||||||    
T  16976020 atctgatggttgtgatgtgtttatacacggtgcataaggaaataacttatgaaccataacttttgcc 16975954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 25889028 - 25889094
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  25889028 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 25889094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 28375530 - 28375464
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcat-aagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||| ||||| |  ||||||||||||||||||||||    
T  28375530 atctgatggttgtgatgtgtttatgcacggtgcataaagaaataacttatgcaccataacttttgcc 28375464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 34369726 - 34369660
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgcc 204  Q
    |||||||||||||||||||||||| ||||||||||||| || |  |||||||||||||| |||||||    
T  34369726 atctgatggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataatttttgcc 34369660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 49936937 - 49937003
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  49936937 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 49937003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 18618901 - 18618833
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgccga 206  Q
    ||||||||||||||| |||||||| ||||||||||||| || |   |||||||||||||||||||||||    
T  18618901 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataatttatgcaccataacttttgccga 18618833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 48762331 - 48762398
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    |||| |||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  48762331 atctaatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 48762398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 19897760 - 19897826
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||||||||||  ||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  19897760 atctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 19897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 20434722 - 20434788
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||| |||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  20434722 atctaatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 20434788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 21256777 - 21256835
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataactttt 201  Q
    ||||||||||||||||||| ||||||||||||| || |  |||||||||||||||||||    
T  21256777 atggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataactttt 21256835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 43452608 - 43452542
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||| ||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  43452608 atctgatagttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 43452542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 23175525 - 23175585
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataactttt 201  Q
    ||||||||||||||||||||| ||||| |||||| ||| |  |||||||||||||||||||    
T  23175525 tgatggttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataactttt 23175585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 6314178 - 6314115
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||| ||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  6314178 tgatggctgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 6314115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 6314249 - 6314288
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  6314249 tttatatacggtgcataaggatttccttatgcaccataac 6314288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 12070613 - 12070652
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  12070613 tttatgcagggtgcataagaatttccttatgcaccataac 12070652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 16976088 - 16976127
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  16976088 tttatgcacggtgcataaggatttccttatgcaccataac 16976127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 17811286 - 17811325
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  17811286 tttatacagggtgcataaggatttccttatgcaccataac 17811325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 23174443 - 23174404
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  23174443 tttatgcacggtgcataagaattttcttatgcaccataac 23174404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 23817443 - 23817482
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  23817443 tttatgcacggtgcataaggatttccttatgcaccataac 23817482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 24636059 - 24636098
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  24636059 tttatgcacggtgcataaggatttccttatgcaccataac 24636098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 32595145 - 32595106
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  32595145 tttatgcagggtgcataagaatttccttatgcaccataac 32595106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 43452675 - 43452714
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  43452675 tttatgcacggtgcataaggatttccttatgcaccataac 43452714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 48762264 - 48762225
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  48762264 tttatgcacggtgcataaggatttccttatgcaccataac 48762225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 49936870 - 49936831
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  49936870 tttatgcacggtgcataaggatttccttatgcaccataac 49936831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 45849312 - 45849350
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataa 196  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  45849312 tttatgcagggtgcataagaatttccttatgcaccataa 45849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 19897687 - 19897654
Alignment:
Q  164 cacggtgcataagaatttccttatgcaccataac 197  Q
    ||||||||||||| ||||||||||||||||||||    
T  19897687 cacggtgcataaggatttccttatgcaccataac 19897654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 31529665 - 31529702
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    |||||||||||||||||||||||| || ||||||||||    
T  31529665 atctgatggttgtgaagtgtttatgcatggtgcataag 31529702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 33097471 - 33097434
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    |||||||||||||||||||||||| || ||||||||||    
T  33097471 atctgatggttgtgaagtgtttatgcagggtgcataag 33097434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 44260584 - 44260547
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    |||||||||||||||||||||||| || ||||||||||    
T  44260584 atctgatggttgtgaagtgtttatgcagggtgcataag 44260547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 19841573 - 19841485
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgccg 205  Q
    |||||||||| |||| || | |||||||||| |||||||   |||| || ||||||||||   |  |||||||||||||||||||||||    
T  19841573 gattattacaagtgtccaattgatctgatggctgtgaagaccttatgcatggtgcataagttatggcttatgcaccataacttttgccg 19841485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 51801734 - 51801770
Alignment:
Q  140 tctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    ||||||||||||||||||||||| || ||||||||||    
T  51801734 tctgatggttgtgaagtgtttatgcagggtgcataag 51801770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 32987374 - 32987510
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32987374 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacg 32987473  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  32987474 gtgcataaggatttccttatgcaccataacttttgcc 32987510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 39022111 - 39021970
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  39022111 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacatgtacactagatctgatgattgtgaagtgtttatgcacg 39022012  T
Q  168 gtgcataagaatttccttatgcaccataacttttgccgaaag 209  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  39022011 gtgcataaggatttccttatgcaccataacttttgcccaaag 39021970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 71 - 204
Target Start/End: Complemental strand, 7058248 - 7058114
Alignment:
Q  71 tgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggt 169  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  7058248 tgtttgaagcaaatgaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatcggatggttgtgaagtgtttatgcacggt 7058149  T
Q  170 gcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||| |||||||||||||||||||||||||||    
T  7058148 gcataagtatttccttatgcaccataacttttgcc 7058114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 4836630 - 4836762
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4836630 aatgtttgaagcaaatgaagtttgatttggtgtagtttgaaaagcttaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacg 4836729  T
Q  168 gtgcataagaatttccttatgcaccataacttt 200  Q
    ||||||||| ||||| |||||||||||||||||    
T  4836730 gtgcataagcatttctttatgcaccataacttt 4836762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 4842075 - 4842207
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4842075 aatgtttgaagcaaatgaagtttgatttggtgtagtttgaaaagcttaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacg 4842174  T
Q  168 gtgcataagaatttccttatgcaccataacttt 200  Q
    ||||||||| ||||| |||||||||||||||||    
T  4842175 gtgcataagcatttctttatgcaccataacttt 4842207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 15260784 - 15260917
Alignment:
Q  73 tttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgc 171  Q
    |||||||||||| |||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  15260784 tttgaagcaaatgaagtttgatttggtgtagtttgagaagccttggattattaaacgtgtacactagatttgatggttgtgaagtgtttatgcacggtgc 15260883  T
Q  172 ataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||| |||  ||||||||||||||||||||||||    
T  15260884 ataaggaaaatccttatgcaccataacttttgcc 15260917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 7614204 - 7614096
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| || |    
T  7614204 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctatgattattacacgtgtacattagatctgatggttgtgaagtgtttatgcatg 7614105  T
Q  168 gtgcataag 176  Q
    |||||||||    
T  7614104 gtgcataag 7614096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 8550640 - 8550532
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8550640 aatgtttgaagcaaatgaagtttgatttggtgtaatttgagaagcttatgattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacg 8550541  T
Q  168 gtgcataag 176  Q
    |||||||||    
T  8550540 gtgcataag 8550532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 1208805 - 1208709
Alignment:
Q  108 gaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1208805 gaagcctaggattattacacgtgtacactagatcttatggttgtaaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 1208709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 15181906 - 15181819
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  15181906 ttgatttggtgtagtttgagaaacctaagattattacacgtgtacactagatctgatgcttgtgaagtgtttatgcagggtgcataag 15181819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 42433766 - 42433701
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||    
T  42433766 atctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgcaccataacttttgcc 42433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 19784337 - 19784268
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccgaa 207  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||||    
T  19784337 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccgaa 19784268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 10237420 - 10237354
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  10237420 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 10237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 41099248 - 41099182
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  41099248 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 41099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 43690706 - 43690640
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  43690706 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 43690640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 34648133 - 34648197
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccgaa 207  Q
    ||||||||||||||||||| |||||||||||| ||| |  ||||||||||||||||||| |||||    
T  34648133 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttcccgaa 34648197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 10237487 - 10237526
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  10237487 tttatacacggtgcataaggatttccttatgcaccataac 10237526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 15227096 - 15227029
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||| | |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  15227096 atctgatggttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 15227029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 34647212 - 34647173
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  34647212 tttatacacggtgcataaggatttccttatgcaccataac 34647173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 39023002 - 39023041
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  39023002 tttatacacggtgtataagaatttccttatgcaccataac 39023041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 40012180 - 40012247
Alignment:
Q  137 agatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||| ||||||||| |||| ||||| || |||||||||| |  ||||||||||||||||||||||||    
T  40012180 agatccgatggttgtaaagtctttatgcatggtgcataaggaaatccttatgcaccataacttttgcc 40012247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 9852331 - 9852273
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataactttt 201  Q
    ||||||||||||||||||| |||||||||||| ||| |  |||||||||||||||||||    
T  9852331 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 9852273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 30413980 - 30413914
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||| |||||||||||||    
T  30413980 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcagcataacttttgcc 30413914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 34633321 - 34633387
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||| |||||||||||||||    
T  34633321 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgtaccataacttttgcc 34633387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 41451171 - 41451105
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||| |||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  41451171 atctgatgattgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 41451105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 2750161 - 2750101
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacg 128  Q
    ||||||| ||| |||| |||||||||||| |||||||||||||| ||| ||||||||||||    
T  2750161 aatgtttaaagtaaatgaagtttgatttggtgtagtttgagaagtctatgattattacacg 2750101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 35302591 - 35302649
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataag--aatttccttatgcaccataactttt 201  Q
    ||||||||||||||||||| |||||||||||||  ||| ||| |||||||||||||||||    
T  35302591 atggttgtgaagtgtttatgcacggtgcataagaaaatgtcc-tatgcaccataactttt 35302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 1149956 - 1149917
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  1149956 tttatgcacggtgcataaggatttccttatgcaccataac 1149917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 4835559 - 4835520
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  4835559 tttatgcacggtgcataaggatttccttatgcaccataac 4835520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 7857746 - 7857679
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataagaatttc-cttatgcaccataacttttgccg 205  Q
    |||||||| |||||| |||||||| ||||| |||||||||  |  |||||||||||||||||||||||    
T  7857746 atctgatgattgtgatgtgtttatgcacggcgcataagaaaatggcttatgcaccataacttttgccg 7857679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 23567646 - 23567685
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  23567646 tttatgcagggtgcataagaatttccttatgcaccataac 23567685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 24473247 - 24473286
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  24473247 tttatacagggtgcataaggatttccttatgcaccataac 24473286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 34633254 - 34633215
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  34633254 tttatgcacggtgcataaggatttccttatgcaccataac 34633215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 35301670 - 35301631
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  35301670 tttatgcacggtgcataaggatttccttatgcaccataac 35301631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 39657749 - 39657710
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  39657749 tttatgcacggtgcataaggatttccttatgcaccataac 39657710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 40022429 - 40022390
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  40022429 tttatacacagtgcataaggatttccttatgcaccataac 40022390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 1209789 - 1209827
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataa 196  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  1209789 tttatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 12355490 - 12355449
Alignment:
Q  137 agatctgatggttgtgaagtgtttatacacggtgcataagaa 178  Q
    |||||| ||||||||||||||||||| || ||||||||||||    
T  12355490 agatctaatggttgtgaagtgtttatgcagggtgcataagaa 12355449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 39849289 - 39849240
Alignment:
Q  257 aatattttacctgatgc-aagttgcaaattaagattcagataatagcttt 305  Q
    |||| |||||||||||| |||||||| ||||||||||| |||||||||||    
T  39849289 aataatttacctgatgccaagttgcagattaagattcatataatagcttt 39849240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 1671890 - 1671850
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtg 157  Q
    ||||||||||||| ||||||| |||||||| ||||||||||    
T  1671890 gattattacacgtatacactaaatctgatgattgtgaagtg 1671850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 15227170 - 15227202
Alignment:
Q  165 acggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||| ||||||||||||||||||||    
T  15227170 acggtgcataaggatttccttatgcaccataac 15227202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 17061471 - 17061559
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgccg 205  Q
    |||||||||| |||| || | |||||||||| |||||||   |||| || ||||||||||   |  |||||||||||||||||||||||    
T  17061471 gattattacaagtgtccaattgatctgatggctgtgaagaccttatgcatggtgcataagttatggcttatgcaccataacttttgccg 17061559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 17221194 - 17221106
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgccg 205  Q
    |||||||||| |||| || | |||||||||| |||||||   |||| || ||||||||||   |  |||||||||||||||||||||||    
T  17221194 gattattacaagtgtccaattgatctgatggctgtgaagaccttatgcatggtgcataagttatggcttatgcaccataacttttgccg 17221106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 17586887 - 17586799
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgccg 205  Q
    |||||||||| |||| || | |||||||||| |||||||   |||| || ||||||||||   |  |||||||||||||||||||||||    
T  17586887 gattattacaagtgtccaattgatctgatggctgtgaagaccttatgcatggtgcataagttatggcttatgcaccataacttttgccg 17586799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 27506747 - 27506707
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  27506747 tttatgcagggtgcataaggatttccttatgcaccataact 27506707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 36952089 - 36952041
Alignment:
Q  257 aatattttacctgatgc-aagttgcaaattaagattcagataatagctt 304  Q
    |||| |||||||||||| ||| ||||||||||| |||||||||||||||    
T  36952089 aataatttacctgatgccaagctgcaaattaagcttcagataatagctt 36952041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 8e-55; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 30429009 - 30428873
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  30429009 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaaatgtttatgcacg 30428910  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30428909 gtgcataaggatttccttatgcaccataacttttgcc 30428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 46573429 - 46573564
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  46573429 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatatacg 46573528  T
Q  168 gtgcataagaatttccttatgcaccataacttttgccg 205  Q
    |||||||||||   ||||||||| ||||||||||||||    
T  46573529 gtgcataagaa--accttatgcatcataacttttgccg 46573564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 46024159 - 46024027
Alignment:
Q  73 tttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgc 171  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  46024159 tttgaagcaaatgaagtttgatttaatgtagtttgagaagtctaggattattacacgtgtacactatatctgatggttgtgaagtgtttatgcacggtgc 46024060  T
Q  172 ataagaatttccttatgcaccataacttttgcc 204  Q
    ||||| |||| ||| ||||||||||||||||||    
T  46024059 ataaggattttcttgtgcaccataacttttgcc 46024027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 15974865 - 15975001
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||||||||| || |||||||||||| |||| ||||| ||||||| |||||||||| |||||||||| || ||||||||||||||||||||| ||||    
T  15974865 aatgtttgaagcagatgaagtttgatttggtgtactttgataagcctaagattattacatgtgtacactaaatatgatggttgtgaagtgtttatgcacg 15974964  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  15974965 gtgcataaggatttccttatgcaccataacttttgcc 15975001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 33798067 - 33797966
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  33798067 aatgtttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtatactagatctgatggttgtgaaatgtttatgcacg 33797968  T
Q  168 gt 169  Q
    ||    
T  33797967 gt 33797966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 5757502 - 5757386
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttat 187  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |  |||||    
T  5757502 ttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggaaatgtcttat 5757403  T
Q  188 gcaccataacttttgcc 204  Q
    |||  ||||||||||||    
T  5757402 gcataataacttttgcc 5757386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 48690991 - 48690895
Alignment:
Q  108 gaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  48690991 gaagcctatgattattacacgtgtacactagatttgatggttgtgaactgtttatgcacggtgcataaggatttctttatgcaccataacttttgcc 48690895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 12279844 - 12279743
Alignment:
Q  105 tgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||| ||||| ||| ||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||||||    
T  12279844 tgagaggcctaggatcattacacgtatacactagatctaatggttgtgaagtctttatgcacggtgcataaagatttccttatgcaccataacttttgcc 12279745  T
Q  205 ga 206  Q
    ||    
T  12279744 ga 12279743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 204
Target Start/End: Complemental strand, 12279740 - 12279641
Alignment:
Q  105 tgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||| ||||| ||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||  ||||||||||| |||||||||||||||    
T  12279740 tgagaggcctaggatcattacacgtgtacactggatctaatggttgtgaagtctttatacacggtgcataatgatttccttatgtaccataacttttgcc 12279641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 28396818 - 28396722
Alignment:
Q  108 gaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||| ||||||||| | |||||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  28396818 gaagcctaggattattactcttgtacactagatctgatgattgtgaaatgtttatgcacggtgcataaggatttccttatgcatcgtaacttttgcc 28396722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 32090693 - 32090607
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa 175  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||| ||||||| || |||||||||    
T  32090693 ttgatttggtgtagtttgagaagcctatgattattacacgtgtatactagatttgatggttctgaattgtttatgcagggtgcataa 32090607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 48305323 - 48305237
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||| |||||||||||||||| |||| |||| |||||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  48305323 gattattatacgtgtacactagatccgatgtttgtaaagtgtttatgcacggtgcataagga-atccttatgcaccataacttttgcc 48305237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 25778902 - 25778837
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||||    
T  25778902 atctgatggttgtgaagtgcttatgcacagtgcataagaattttcttatgcaccataacttttgcc 25778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 48691088 - 48691038
Alignment:
Q  108 gaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgt 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48691088 gaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgt 48691038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 44141229 - 44141318
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| || ||||||||| ||| |  ||||||||  |||||||||||||    
T  44141229 gattattacacgtgtacactaaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcatgataacttttgccg 44141318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 41911109 - 41911176
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  41911109 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 41911176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 763763 - 763697
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  763763 atctgatggttgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 763697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 16933244 - 16933310
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  16933244 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 16933310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 16938627 - 16938693
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  16938627 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 16938693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 20000674 - 20000740
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| ||||||||||||| || |  ||||||||||||||||||||||    
T  20000674 atctgatggttgtgatgtgtttatgcacggtgcataagtaaatgacttatgcaccataacttttgcc 20000740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 30884222 - 30884288
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  30884222 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 30884288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 31660135 - 31660069
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  31660135 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 31660069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 46358586 - 46358520
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  46358586 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46358520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 47340213 - 47340132
Alignment:
Q  139 atctgatggttgtgaagtgttt-atacacggtgcataagaatttc-cttatgcaccataacttttgccgaaagtaaggtgat 218  Q
    ||||||||||||||| |||||| || |||||||||||||||  |  |||||||||||||||||||||||||| | |||||||    
T  47340213 atctgatggttgtgatgtgttttatgcacggtgcataagaaaataacttatgcaccataacttttgccgaaatttaggtgat 47340132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 11732083 - 11732044
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  11732083 tttatgcacggtgcataaggatttccttatgcaccataac 11732044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 11732647 - 11732710
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataactttt 201  Q
    |||| ||||||||||||||||||| ||| ||||||||| || |  |||||||||||||||||||    
T  11732647 atctaatggttgtgaagtgtttatgcacagtgcataagaaaatggcttatgcaccataactttt 11732710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 16933176 - 16933137
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  16933176 tttatgcacggtgcataaggatttccttatgcaccataac 16933137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 16938559 - 16938520
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  16938559 tttatgcacggtgcataaggatttccttatgcaccataac 16938520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 27335625 - 27335667
Alignment:
Q  135 ctagatctgatggttgtgaagtgtttatacacggtgcataagaa 178  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  27335625 ctagatctgatggttgtgaagtgtttatgca-ggtgcataagaa 27335667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 30884155 - 30884116
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  30884155 tttatgcacggtgcataaggatttccttatgcaccataac 30884116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 31660202 - 31660241
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  31660202 tttatgcacggtgcataaggatttccttatgcaccataac 31660241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 34227879 - 34227918
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  34227879 tttatgcagggtgcataagaatttccttatgcaccataac 34227918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 35737081 - 35737120
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  35737081 tttatgcacggtgcataaggatttccttatgcaccataac 35737120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 41911045 - 41911006
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  41911045 tttatgcacggtgcataaggatttccttatgcaccataac 41911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 46346712 - 46346755
Alignment:
Q  135 ctagatctgatggttgtgaagtgtttatacacggtgcataagaa 178  Q
    |||||| |||||||||||||||||||||||| | ||||||||||    
T  46346712 ctagatatgatggttgtgaagtgtttatacaggatgcataagaa 46346755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 46358653 - 46358692
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  46358653 tttatgcacggtgcataaggatttccttatgcaccataac 46358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 47340280 - 47340319
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  47340280 tttatgcacggtgcataaggatttccttatgcaccataac 47340319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 48692053 - 48692092
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  48692053 tttatgcacggtgcataaggatttccttatgcaccataac 48692092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 48830602 - 48830641
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  48830602 tttatgcacggtgcataaggatttccttatgcaccataac 48830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 24359932 - 24359874
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataactttt 201  Q
    |||||||||||||||| || |||||||||||| ||| |  |||||||||||||||||||    
T  24359932 atggttgtgaagtgttgatgcacggtgcataaggaaatgacttatgcaccataactttt 24359874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 197
Target Start/End: Complemental strand, 26945546 - 26945516
Alignment:
Q  167 ggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||||    
T  26945546 ggtgcataagaatttccttatgcaccataac 26945516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 34875555 - 34875518
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    |||||||||||||||||||||||| || ||||||||||    
T  34875555 atctgatggttgtgaagtgtttatgcagggtgcataag 34875518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 33798743 - 33798775
Alignment:
Q  165 acggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||| ||||||||||||||||||||    
T  33798743 acggtgcataaggatttccttatgcaccataac 33798775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 8e-55; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 18298045 - 18298177
Alignment:
Q  74 ttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgca 172  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18298045 ttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgca 18298144  T
Q  173 taagaatttccttatgcaccataacttttgccg 205  Q
    |||| ||||||||||||||||||||||||||||    
T  18298145 taaggatttccttatgcaccataacttttgccg 18298177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 25193028 - 25192891
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  25193028 aatgtttgaagcaaatgaagtttgatttggtgtaatttgagaagcctagaattattacacgtgtacactagatctaatggttgtgaagtgtttatgcacg 25192929  T
Q  168 gtgcataagaatttccttatgcaccataacttttgccg 205  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25192928 gtgcataaggatttccttatgcaccataacttttgccg 25192891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 20709910 - 20709774
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  20709910 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacg 20709811  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||| ||||| |||||||||||||||||||||||||||    
T  20709810 gtggataaggatttccttatgcaccataacttttgcc 20709774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 14551288 - 14551382
Alignment:
Q  108 gaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgc 203  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14551288 gaagcctaggattattacacatgtacactagatctgatggttgtgaagtgtttatgcac-gtgcataagaatttccttatgcaccataacttttgc 14551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 4281738 - 4281814
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttataca 165  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4281738 ttgatttgctgtagtttgagaaacctaggattattacacgtgtacactagatctgatggttgtgaagtgtttataca 4281814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 4579787 - 4579865
Alignment:
Q  108 gaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttcctta 186  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||    
T  4579787 gaagcataagattattacacgtgtacactagatctgatggttgtaaagtgtttatgcatggtgcataaggatttcctta 4579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 25995402 - 25995286
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttat 187  Q
    |||||||| |||| |||||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||  |||||||| ||| |  |||||    
T  25995402 ttgatttggtgtaatttgagtagcctaggattattacacgtgtacactaaatctgatggttgtgaagtatttatgcagagtgcataaggaaatgtcttat 25995303  T
Q  188 gcaccataacttttgcc 204  Q
    |||  ||||||||||||    
T  25995302 gcataataacttttgcc 25995286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 39355101 - 39355031
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccgaaa 208  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||||||    
T  39355101 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccgaaa 39355031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 5098809 - 5098745
Alignment:
Q  112 cctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    |||| |||||||||||||||||| || || ||||||||||||||||||||| || ||||||||||    
T  5098809 cctaggattattacacgtgtacaataaatttgatggttgtgaagtgtttatgcagggtgcataag 5098745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 2263635 - 2263572
Alignment:
Q  143 gatggttgtgaagtgtttatacacggtgcat-aagaatttccttatgcaccataacttttgccg 205  Q
    |||||||||||||||||||| |||||||||| ||||| |  |||||||||||||||||||||||    
T  2263635 gatggttgtgaagtgtttatgcacggtgcataaagaaatggcttatgcaccataacttttgccg 2263572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 15016566 - 15016633
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  15016566 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 15016633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 7487254 - 7487320
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  7487254 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 7487320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 8149897 - 8149829
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccga 206  Q
    ||||||||||||||| |||||||| |||| ||||||| ||| |  ||||||||||||||||||||||||    
T  8149897 atctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttgccga 8149829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 8154521 - 8154453
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccga 206  Q
    ||||||||||||||| |||||||| |||| ||||||| ||| |  ||||||||||||||||||||||||    
T  8154521 atctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttgccga 8154453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 15016499 - 15016460
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  15016499 tttatgcacggtgcataagaatttccttatgcaccataac 15016460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 1292179 - 1292245
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| ||||||||  |||||||||||| || |  ||||||||||||||||||||||    
T  1292179 atctgatggttgtgatgtgtttatgtacggtgcataagaaaataacttatgcaccataacttttgcc 1292245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 9143651 - 9143585
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||| |||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  9143651 atctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 9143585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 41346045 - 41346103
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataactttt 201  Q
    |||||||||||||||||||| |||||||||||| || |  |||||||||||||||||||    
T  41346045 atggttgtgaagtgtttatatacggtgcataagaaaatggcttatgcaccataactttt 41346103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 18762928 - 18762867
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  18762928 atggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 18762867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 34464777 - 34464713
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttg 202  Q
    |||||||||||||||  ||||||| |||||||||||| ||| |  ||||||||||||||||||||    
T  34464777 atctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 34464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 43822469 - 43822409
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggtt 149  Q
    |||||||  |||| ||| |||| |||| |||||| ||||||||||||||||||||||||||    
T  43822469 ttgattttgtgtaatttaagaaacctaggattatcacacgtgtacactagatctgatggtt 43822409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 1292112 - 1292073
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  1292112 tttatgcacggtgcataaggatttccttatgcaccataac 1292073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 7487187 - 7487148
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  7487187 tttatgcacggtgcataaggatttccttatgcaccataac 7487148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 34726799 - 34726838
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  34726799 tttatgcagggtgcataagaatttccttatgcaccataac 34726838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 39355168 - 39355207
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  39355168 tttatgcacggtgcataaggatttccttatgcaccataac 39355207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 41345128 - 41345089
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  41345128 tttatgcacggtgcataaggatttccttatgcaccataac 41345089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 197
Target Start/End: Original strand, 20194039 - 20194069
Alignment:
Q  167 ggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||||    
T  20194039 ggtgcataagaatttccttatgcaccataac 20194069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 36636915 - 36636960
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttat 162  Q
    |||||||||||||||| |  | ||||||||||||||||||||||||    
T  36636915 gattattacacgtgtaaaacaaatctgatggttgtgaagtgtttat 36636960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 19246703 - 19246663
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  19246703 tttatgcagggtgcataaggatttccttatgcaccataact 19246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 28070082 - 28070218
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  28070082 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatagttgtgaagtgtttatgcacg 28070181  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28070182 gtgcataaggatttccttatgcaccataacttttgcc 28070218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 13362906 - 13362772
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  13362906 aatgtttgaagcaaatgaattttgatttggtgtagtttgagaagcctatgattattacacgtatacactagatctgatggttgtgaagtgtttatgcacg 13362807  T
Q  168 gtgcataagaatttccttatgcaccataacttttg 202  Q
    ||||||||| |||||||||||||||||||||||||    
T  13362806 gtgcataaggatttccttatgcaccataacttttg 13362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 23335636 - 23335772
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||||| |||||| || ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  23335636 aatgtttgatgcaaatgaactttgatttggtgtagtttgagaagcctatgattattacacgtgtacactagatctgatggttgtgaaatgtttatgcacg 23335735  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||| | |||||||||||||||||||||||||||    
T  23335736 gtgcatacggatttccttatgcaccataacttttgcc 23335772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 25017179 - 25017280
Alignment:
Q  101 agtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttt 200  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  25017179 agtttgagaaacctaaaattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttt 25017278  T
Q  201 tg 202  Q
    ||    
T  25017279 tg 25017280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 16668743 - 16668831
Alignment:
Q  88 tttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  16668743 tttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcataag 16668831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 34329223 - 34329127
Alignment:
Q  108 gaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||    
T  34329223 gaagcctatgattattattcgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaagatttccttatgcaccataacttttgcc 34329127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 2826996 - 2827103
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  2826996 aatgtttgaagcaaatgaaatttgatttggtgtagtttgagaagcctaagataattacacgtgtacactagatctgatggttgtaaagtgtttatgcacg 2827095  T
Q  168 gtgcataa 175  Q
    ||| ||||    
T  2827096 gtggataa 2827103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 18465506 - 18465592
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa 175  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  18465506 ttgatttggtgtagtttgagaagtctaagattattacacgtgtacactagatctgatggttgtgaagtgtttatgcaggatgcataa 18465592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 8949003 - 8948932
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttat 162  Q
    |||||||| |||||||||||||||||| ||||||  ||||||||||||| ||||||| ||| ||||||||||||    
T  8949003 ttgatttggtgtagtttgagaagcctaggattat--cacgtgtacactaaatctgatagttttgaagtgtttat 8948932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 15416730 - 15416662
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccga 206  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||||    
T  15416730 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccga 15416662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 42512271 - 42512200
Alignment:
Q  132 acactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| ||||| || |  |||||||||||||||    
T  42512271 acactagatctgatggttgtgaagtgtttatgcacggtggataaggatttctttct-aaccataacttttgcc 42512200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 13553049 - 13552983
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  13553049 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 13552983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 26637837 - 26637903
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| ||||||||||||| || |  ||||||||||||||||||||||    
T  26637837 atctgatggttgtgatgtgtttatgcacggtgcataagaaaatggcttatgcaccataacttttgcc 26637903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 13553116 - 13553155
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  13553116 tttatacacggtgcataaggatttccttatgcaccataac 13553155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 14394534 - 14394468
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| || ||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  14394534 atctgatggttgtgatgtatttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 14394468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 14940356 - 14940418
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttt 200  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||    
T  14940356 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 14940418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 30783501 - 30783435
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||||||| || |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  30783501 atctgatggttgcgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 30783435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 33868248 - 33868155
Alignment:
Q  112 cctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||| ||||||||||| |||| | || ||| |||||||||||||||||||| || ||||||||| ||| |  ||||||||  ||||||||||||    
T  33868248 cctaggattattacacatgtaaaataaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgcc 33868155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 3883968 - 3883929
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  3883968 tttatgcacggtgcataaggatttccttatgcaccataac 3883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 3884038 - 3884101
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||||| | |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  3884038 tgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 3884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 14394601 - 14394640
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  14394601 tttatgcacggtgcataaggatttccttatgcaccataac 14394640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 14940289 - 14940250
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  14940289 tttatgcacggtgcataaggatttccttatgcaccataac 14940250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 26637770 - 26637731
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  26637770 tttatgcacggtgcataaggatttccttatgcaccataac 26637731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 37456746 - 37456679
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| ||||||||  ||||||||||| ||| |  || ||||||||||||||||||||    
T  37456746 atctgatggttgtgatgtgtttatgtacggtgcataaggaaatggctcatgcaccataacttttgccg 37456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 197
Target Start/End: Original strand, 5411768 - 5411798
Alignment:
Q  167 ggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||||    
T  5411768 ggtgcataagaatttccttatgcaccataac 5411798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 197
Target Start/End: Complemental strand, 36864098 - 36864069
Alignment:
Q  168 gtgcataagaatttccttatgcaccataac 197  Q
    ||||||||||||||||||||||||||||||    
T  36864098 gtgcataagaatttccttatgcaccataac 36864069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 4675025 - 4674989
Alignment:
Q  140 tctgatggttgtgaagtgtttatacacggtgcataag 176  Q
    ||||||||||||||||||||||| || ||||||||||    
T  4675025 tctgatggttgtgaagtgtttatgcagggtgcataag 4674989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 39086709 - 39086749
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  39086709 tttatacatagtgcataaggatttccttatgcaccataact 39086749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 27764376 - 27764240
Alignment:
Q  69 aatgtttgaagcaaataag-tttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  27764376 aatgtttgaagcaaataaggtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatctgatggttgcgaagtgtttatgcacg 27764277  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27764276 gtgcataaggatttccttatgcaccataacttttgcc 27764240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 45256111 - 45255975
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  45256111 aatgtttgaagcaaatgaagtttgatttgatgtagtttgaaaagcctaggattattacacgtgtacactatatctgatagttgtgaagtgtttatgcacg 45256012  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  45256011 gtgcataaggatttccttatgcaccataacttttgcc 45255975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 36621630 - 36621762
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||| |||||| || |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  36621630 aatgtttgaagcaaatgaagtttgatttggtgtagtttaagaagcataggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacg 36621729  T
Q  168 gtgcataagaatttccttatgcaccataacttt 200  Q
    ||||||||| |||||||||||||||||||||||    
T  36621730 gtgcataaggatttccttatgcaccataacttt 36621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 69 - 201
Target Start/End: Original strand, 22181174 - 22181307
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    ||||||||| |||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  22181174 aatgtttgaggcaaatgaagtttgatttggtgtagtttgagaaacctaggattattacacgtgtacactaaatctgatggttgtgaagtttttatgcacg 22181273  T
Q  168 gtgcataagaatttccttatgcaccataactttt 201  Q
    ||||||||| ||||||||||||||||||||||||    
T  22181274 gtgcataaggatttccttatgcaccataactttt 22181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 26447341 - 26447477
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| || ||||||||| |||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26447341 aatgtttgaagcaaatgaaatttgatttggtgtaatttgtgaagcctagaattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacg 26447440  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  26447441 gtgcataaggatttccttatgcaccattacttttgcc 26447477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 38485603 - 38485733
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  38485603 aatgtttgaagcaaatgaagtttgatttaatgtattttgagaagcctaggattattacacgtgtacattagatctgatggttgtgaagcgtttatgcacg 38485702  T
Q  168 gtgcataagaatttccttatgcaccataacttttg 202  Q
    ||||||||    |||||||||||||||||||||||    
T  38485703 gtgcataa----ttccttatgcaccataacttttg 38485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 21097276 - 21097140
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||| ||| | |||| ||  ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  21097276 aatgtttgaagcaaatgaagtttgatttggtgtaatttaataagcttagaattattacacgtgtaaactagatctaatggttgtgaagtgtttatacacg 21097177  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| ||||||||||||||  |||||||||||    
T  21097176 gtgcataaggatttccttatgcacggtaacttttgcc 21097140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 637990 - 637883
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  637990 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaaaattattacacatgtacactagatctgatggttgtgaagtgtttatgcacg 637891  T
Q  168 gtgcataa 175  Q
    ||||||||    
T  637890 gtgcataa 637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 4168494 - 4168386
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||| ||||| |||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  4168494 aatgtttgaaacaaatgaagtttgatttggtgtagtttgagaaacctaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacg 4168395  T
Q  168 gtgcataag 176  Q
    |||||||||    
T  4168394 gtgcataag 4168386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 50563679 - 50563794
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatg 188  Q
    |||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| |  ||||||    
T  50563679 ttgatttggtgtagtttgagaaacctataattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcatatgaaatatcttatg 50563778  T
Q  189 caccataacttttgcc 204  Q
    ||  ||||||||||||    
T  50563779 cataataacttttgcc 50563794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 51837037 - 51837155
Alignment:
Q  85 aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttcct 184  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| ||||| | || || ||||| |||| ||    
T  51837037 aagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacattaaatctgatggttgtgaagtatttatgctcgatg-ataaggattttct 51837135  T
Q  185 tatgcaccataacttttgcc 204  Q
    ||| ||||||||||||||||    
T  51837136 tatacaccataacttttgcc 51837155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 50643808 - 50643743
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  50643808 atctgatggttatgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 50643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 29826606 - 29826669
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttg 202  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||    
T  29826606 atctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgtaccataacttttg 29826669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 1729604 - 1729678
Alignment:
Q  128 gtgtacactagatctgatggttgtgaagtgtttatacacggtgcat-aagaatttccttatgcaccataactttt 201  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || ||||| |  |||||||||||||||||||    
T  1729604 gtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataaagaaatgacttatgcaccataactttt 1729678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 1621941 - 1621874
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  1621941 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccg 1621874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 6386519 - 6386573
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgc 171  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| || |||||    
T  6386519 gattattacacgtgtccactaaatctgatggttgtgaagtgtttatgcagggtgc 6386573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 10472563 - 10472497
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||||||||||| ||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  10472563 atctgatggttgtgaaatgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 10472497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 13635725 - 13635791
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  13635725 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 13635791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 15051136 - 15051202
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  15051136 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 15051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 30597765 - 30597699
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  30597765 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 30597699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 36011909 - 36011843
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  36011909 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 36011843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 46672505 - 46672439
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  46672505 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46672439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 49492512 - 49492578
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  49492512 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 49492578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 51921265 - 51921331
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  51921265 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 51921331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 49426060 - 49426124
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    |||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  49426060 tgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 49426124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 11786040 - 11785974
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| ||||||||||||| || |   |||||||||||||||||||||    
T  11786040 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttttgcc 11785974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 11798207 - 11798141
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| ||||||||||||| || |   |||||||||||||||||||||    
T  11798207 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttttgcc 11798141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 26578189 - 26578255
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcat-aagaatttccttatgcaccataacttttgcc 204  Q
    |||||||||||||||||||||||| |||| ||||| ||||| |  |||||||||||| |||||||||    
T  26578189 atctgatggttgtgaagtgtttatgcacgatgcataaagaaatggcttatgcaccatgacttttgcc 26578255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 35291548 - 35291614
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||| |||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  35291548 atcttatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 35291614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 55765547 - 55765481
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||| | |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  55765547 atctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 55765481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 48077817 - 48077861
Alignment:
Q  92 atttgatgtagtttgagaagcctacgattattacacgtgtacact 136  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||    
T  48077817 atttggtgtagtttgagaagcctaggattattacacatgtacact 48077861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 48077862 - 48077910
Alignment:
Q  156 tgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||| ||||||||||||| |||||||||||||  ||||||||||||    
T  48077862 tgtttatgcacggtgcataaggatttccttatgcatgataacttttgcc 48077910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 49492445 - 49492405
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  49492445 tttatgcacggtgcataaggatttccttatgcaccataact 49492405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 2124548 - 2124587
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  2124548 tttatgcagggtgcataagaatttccttatgcaccataac 2124587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 10473651 - 10473690
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  10473651 tttatgcacggtgcataaggatttccttatgcaccataac 10473690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 11786107 - 11786146
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  11786107 tttatgcacggtgcataaggatttccttatgcaccataac 11786146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 11798274 - 11798313
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  11798274 tttatgcacggtgcataaggatttccttatgcaccataac 11798313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 12722941 - 12722980
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  12722941 tttatgcagggtgcataagaatttccttatgcaccataac 12722980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 13635658 - 13635619
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  13635658 tttatgcacggtgcataaggatttccttatgcaccataac 13635619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 15051069 - 15051030
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  15051069 tttatgcacggtgcataaggatttccttatgcaccataac 15051030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 22180247 - 22180208
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  22180247 tttatgcacggtgcataaggatttccttatgcaccataac 22180208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 25574128 - 25574195
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    |||||||||||||||||||||||| || ||||||||| ||| |  ||||||||  |||||||||||||    
T  25574128 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgccg 25574195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 26577302 - 26577263
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  26577302 tttatgcacggtgcataaggatttccttatgcaccataac 26577263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 30358840 - 30358879
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  30358840 tttatgcacggtgcataaggatttccttatgcaccataac 30358879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 30597832 - 30597871
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  30597832 tttatgcacggtgcataaggatttccttatgcaccataac 30597871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 33883335 - 33883296
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  33883335 tttatacagggtgcataaggatttccttatgcaccataac 33883296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 45256898 - 45256937
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  45256898 tttatgcacggtgcataaggatttccttatgcaccataac 45256937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 49425990 - 49425951
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  49425990 tttatgcacggtgcataaggatttccttatgcaccataac 49425951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 50644673 - 50644712
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  50644673 tttatgcacggtgcataaggatttccttatgcaccataac 50644712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 53441383 - 53441320
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||||||| |||||||| |||| ||||||| ||| |  ||||||||||||||||||||||    
T  53441383 tgatggttgtgatgtgtttatgcacgatgcataaggaaataacttatgcaccataacttttgcc 53441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 638997 - 639035
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataa 196  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  638997 tttatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 27865737 - 27865803
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcata-agaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||  ||| |  ||||||||| ||||||||||||    
T  27865737 atctgatggttgtgatgtgtttatgcacggtgcatatggaaatggcttatgcactataacttttgcc 27865803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 30357868 - 30357810
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataactttt 201  Q
    ||||||||||||||||||| |||||||||||| ||| |  |||||| ||||||||||||    
T  30357868 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgaaccataactttt 30357810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 4169441 - 4169470
Alignment:
Q  168 gtgcataagaatttccttatgcaccataac 197  Q
    ||||||||||||||||||||||||||||||    
T  4169441 gtgcataagaatttccttatgcaccataac 4169470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 38010202 - 38010145
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttt 200  Q
    ||||||||||||||||||| || ||||||||| ||| |  ||||||||||||||||||    
T  38010202 atggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcaccataacttt 38010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 8157292 - 8157332
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  8157292 tttatgcagggtgcataaggatttccttatgcaccataact 8157332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 18923391 - 18923351
Alignment:
Q  73 tttgaagcaaat-aagtttgatttgatgtagtttgagaagc 112  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  18923391 tttgaagcaaatgaagtttgatttggtgtagtttgagaagc 18923351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 38245010 - 38244946
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttg 202  Q
    ||||||||||||||||||||||||  || ||||| || ||| |  ||||||||||||||||||||    
T  38245010 atctgatggttgtgaagtgtttatgaactgtgcagaaggaaatggcttatgcaccataacttttg 38244946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 197
Target Start/End: Original strand, 47219293 - 47219321
Alignment:
Q  169 tgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||    
T  47219293 tgcataagaatttccttatgcaccataac 47219321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 25161 - 25297
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  25161 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaaacctaagattatgacacgtgtacactaaatctgatggttgtgaagtgtttatgcacg 25260  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  25261 gtgcataaggatttccttatgcaccataacttttgcc 25297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 13749 - 13613
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13749 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacg 13650  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||| ||||| |||||||||||||||||||||||||||    
T  13649 gtggataaggatttccttatgcaccataacttttgcc 13613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 33346300 - 33346436
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  33346300 aatgtttgaagcaaacgaagtttgatttgacgtagtttgagaagcctataattattacacgtgtacactagatttgatggttgtgaagtgtttatgcacg 33346399  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||| |||||||||||||||||||||||||||    
T  33346400 gtgcataaggatttccttatgcaccataacttttgcc 33346436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 34399740 - 34399640
Alignment:
Q  105 tgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  34399740 tgagaagcctaggattattacacgtgtacactagatctgatgattgtgaagtgtttatatacggtgcataaggatttccttatgcaccataacttttgcc 34399641  T
Q  205 g 205  Q
    |    
T  34399640 g 34399640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 24737620 - 24737726
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24737620 aatgtttgaagcaaatgaagtttgatttggtgtagtttaagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacg 24737719  T
Q  168 gtgcata 174  Q
    |||||||    
T  24737720 gtgcata 24737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 29157341 - 29157226
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatg 188  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| ||    
T  29157341 ttgatttggtgtagtttgagaagcctagtattattacacgtgtacactagatctgatggttgtaaagtgtttatgcacggtgcataaggatttccttgtg 29157242  T
Q  189 caccataacttttgcc 204  Q
    ||  ||||||||||||    
T  29157241 catgataacttttgcc 29157226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 106 - 204
Target Start/End: Original strand, 15034942 - 15035040
Alignment:
Q  106 gagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||   ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  15034942 gagaagcctatgattattacacatgtacactagatctgatggttgtgaatgatttatgcacggtgcataaggatttccttatgcaccataacttttgcc 15035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 18611304 - 18611218
Alignment:
Q  89 ttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataa 175  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  18611304 ttgatttggtgtggtttgagaagcctatgattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagagtgcataa 18611218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 877344 - 877250
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttat 162  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| || |||||||| ||||||||||  ||||| |||||||||||||||||||    
T  877344 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcttatgattattatacgtgtacacctgatctaatggttgtgaagtgtttat 877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 35119310 - 35119239
Alignment:
Q  129 tgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |    ||||||||||||||||||||||    
T  35119310 tgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga----cttatgcaccataacttttgcc 35119239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 12394387 - 12394442
Alignment:
Q  146 ggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataactttt 201  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  12394387 ggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataactttt 12394442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 31216728 - 31216661
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  31216728 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgccg 31216661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 1449608 - 1449542
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  1449608 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 1449542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 1536896 - 1536962
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  1536896 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 1536962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 34870086 - 34870151
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgc 203  Q
    ||||||||||||||| ||||||||||| ||||||||| ||| |  |||||||||||||||||||||    
T  34870086 atctgatggttgtgatgtgtttatacatggtgcataaggaaatggcttatgcaccataacttttgc 34870151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 31216795 - 31216834
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  31216795 tttatacacggtccataagaatttccttatgcaccataac 31216834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 6900869 - 6900807
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttt 200  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||    
T  6900869 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 6900807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 7089148 - 7089082
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 204  Q
    |||||||| |||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  7089148 atctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 7089082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 30908713 - 30908655
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataactttt 201  Q
    ||||||||||||||||||| |||||||||||| ||| |  |||||||||||||||||||    
T  30908713 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 30908655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 6900936 - 6900975
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  6900936 tttatgcacggtgcataaggatttccttatgcaccataac 6900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 7764499 - 7764444
Alignment:
Q  147 gttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataactttt 201  Q
    |||||||||||||||||||||| ||||||| || |  |||||||||||||||||||    
T  7764499 gttgtgaagtgtttatacacggcgcataagaaaatggcttatgcaccataactttt 7764444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 7765407 - 7765446
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  7765407 tttatgcacggtgcataaggatttccttatgcaccataac 7765446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 15493307 - 15493346
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  15493307 tttatgcacggtgcataaggatttccttatgcaccataac 15493346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 25119147 - 25119108
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  25119147 tttatgcagggtgcataagaatttccttatgcaccataac 25119108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 28116915 - 28116828
Alignment:
Q  117 gattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||||| |||| || | ||||||||||||||||||   |||| || ||||||||||   |  ||||||||||||||||||||||    
T  28116915 gattattacaagtgtccaattgatctgatggttgtgaagatcttatgcatggtgcataagttatggcttatgcaccataacttttgcc 28116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 34869996 - 34869957
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  34869996 tttatgcacggtgcataaggatttccttatgcaccataac 34869957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 2759859 - 2759826
Alignment:
Q  171 cataagaatttccttatgcaccataacttttgcc 204  Q
    |||||| |||||||||||||||||||||||||||    
T  2759859 cataaggatttccttatgcaccataacttttgcc 2759826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 21384819 - 21384791
Alignment:
Q  169 tgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||    
T  21384819 tgcataagaatttccttatgcaccataac 21384791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 29163720 - 29163752
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgca 190  Q
    ||||| |||||||||||||||||||||||||||    
T  29163720 tttatgcacggtgcataagaatttccttatgca 29163752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 27743 - 27607
Alignment:
Q  69 aatgtttgaagcaaat-aagtttgatttgatgtagtttgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacg 167  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  27743 aatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctagaattattacacgtgtacactagatcttatagttgtgaagtgtttatgcacg 27644  T
Q  168 gtgcataagaatttccttatgcaccataacttttgcc 204  Q
    || ||||||  ||||||||||||||||||||||||||    
T  27643 gtacataagtttttccttatgcaccataacttttgcc 27607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 10642 - 10739
Alignment:
Q  106 gagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgc 203  Q
    ||||| |||| ||||||||||  || ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  10642 gagaaacctaggattattacatatgcacactagatctgatggttgtgaagtgtttatgcacggtgtataaggatttccttatgcaccataacttttgc 10739  T

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Target: scaffold0337 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 7116 - 7020
Alignment:
Q  105 tgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataactttt 201  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||  ||||| ||||||||||||||||||    
T  7116 tgagaaacctaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataaagatttcgttatgcaccataactttt 7020  T

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Target: scaffold0189 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 11193 - 11255
Alignment:
Q  142 tgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 204  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||    
T  11193 tgatggttgtgaagtgcttatgcacagtgcataaggatttccttatgcaccataacttttgcc 11255  T

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Target: scaffold0571 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 676 - 743
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  676 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccg 743  T

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Target: scaffold0571; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 586 - 547
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  586 tttatgcacggtgcataaggatttccttatgcaccataac 547  T

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Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 33750 - 33683
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  33750 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccg 33683  T

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Target: scaffold0581 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 8421 - 8488
Alignment:
Q  139 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgccg 205  Q
    ||||||||||||||| |||||||| ||| |||||||| ||| |  |||||||||||||||||||||||    
T  8421 atctgatggttgtgatgtgtttatgcacagtgcataaggaaatggcttatgcaccataacttttgccg 8488  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 24335 - 24272
Alignment:
Q  144 atggttgtgaagtgtttatacacggtgcataag-aatttccttatgcaccataacttttgccga 206  Q
    |||||||||| |||||||| |||||| |||||| || |  ||||||||||||||||||||||||    
T  24335 atggttgtgatgtgtttatgcacggtacataaggaaatggcttatgcaccataacttttgccga 24272  T

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Target: scaffold0074; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 24407 - 24446
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataac 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  24407 tttatgcacggtgcataaggatttccttatgcaccataac 24446  T

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Target: scaffold0074; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 197
Target Start/End: Complemental strand, 44814 - 44784
Alignment:
Q  167 ggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||||    
T  44814 ggtgcataagaatttccttatgcaccataac 44784  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 197
Target Start/End: Original strand, 33828 - 33858
Alignment:
Q  167 ggtgcataagaatttccttatgcaccataac 197  Q
    |||||||||||||||||||||||||||||||    
T  33828 ggtgcataagaatttccttatgcaccataac 33858  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 6516 - 6556
Alignment:
Q  158 tttatacacggtgcataagaatttccttatgcaccataact 198  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  6516 tttatgcatggtgcataaggatttccttatgcaccataact 6556  T

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