View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13296_low_9 (Length: 370)

Name: NF13296_low_9
Description: NF13296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13296_low_9
NF13296_low_9
[»] chr3 (41 HSPs)
chr3 (18-360)||(40880902-40881244)
chr3 (245-350)||(37273135-37273240)
chr3 (236-347)||(2175816-2175926)
chr3 (236-347)||(36646349-36646460)
chr3 (236-331)||(41724203-41724299)
chr3 (236-350)||(43115048-43115162)
chr3 (309-350)||(25182951-25182992)
chr3 (285-350)||(34707460-34707525)
chr3 (250-350)||(1809983-1810083)
chr3 (254-330)||(2152162-2152238)
chr3 (240-343)||(24281044-24281146)
chr3 (236-350)||(14548685-14548799)
chr3 (237-335)||(39602189-39602287)
chr3 (308-349)||(21574554-21574595)
chr3 (251-335)||(1217779-1217863)
chr3 (251-350)||(30923863-30923961)
chr3 (277-335)||(3015822-3015880)
chr3 (293-350)||(11039303-11039360)
chr3 (236-332)||(22214641-22214737)
chr3 (236-348)||(29113454-29113566)
chr3 (236-336)||(38462273-38462372)
chr3 (239-345)||(2719463-2719570)
chr3 (293-351)||(30750049-30750105)
chr3 (283-350)||(36200135-36200202)
chr3 (251-350)||(41452530-41452629)
chr3 (293-344)||(42817192-42817243)
chr3 (272-347)||(47132022-47132097)
chr3 (308-346)||(2606278-2606316)
chr3 (253-339)||(34414759-34414845)
chr3 (308-350)||(50015950-50015992)
chr3 (309-350)||(20194997-20195038)
chr3 (49-98)||(40904373-40904422)
chr3 (314-347)||(50211805-50211838)
chr3 (294-350)||(659824-659880)
chr3 (308-348)||(1395703-1395743)
chr3 (309-349)||(20170918-20170958)
chr3 (251-347)||(24624217-24624313)
chr3 (283-335)||(27290880-27290932)
chr3 (283-351)||(29771877-29771945)
chr3 (310-350)||(30443960-30444000)
chr3 (239-275)||(48323816-48323852)
[»] chr4 (39 HSPs)
chr4 (236-349)||(2996565-2996678)
chr4 (283-350)||(27123316-27123383)
chr4 (291-350)||(6428065-6428124)
chr4 (236-343)||(45128281-45128388)
chr4 (236-347)||(53315318-53315429)
chr4 (244-350)||(11264301-11264407)
chr4 (236-350)||(23819081-23819195)
chr4 (236-350)||(30207535-30207649)
chr4 (230-350)||(33534133-33534253)
chr4 (283-350)||(1965980-1966046)
chr4 (312-350)||(4071946-4071984)
chr4 (312-350)||(18628517-18628555)
chr4 (236-350)||(44319941-44320055)
chr4 (277-350)||(4691881-4691954)
chr4 (293-350)||(25583641-25583698)
chr4 (237-346)||(28300267-28300376)
chr4 (236-345)||(49219131-49219240)
chr4 (254-350)||(1137722-1137818)
chr4 (236-345)||(10192276-10192388)
chr4 (309-345)||(31642258-31642294)
chr4 (238-350)||(55870306-55870417)
chr4 (283-350)||(6987705-6987772)
chr4 (308-347)||(52419585-52419624)
chr4 (293-351)||(2841675-2841733)
chr4 (308-350)||(7368018-7368060)
chr4 (237-303)||(16494816-16494882)
chr4 (308-346)||(27725278-27725316)
chr4 (244-349)||(46415756-46415862)
chr4 (245-347)||(50742803-50742905)
chr4 (310-339)||(21683504-21683533)
chr4 (313-350)||(25904186-25904223)
chr4 (258-335)||(28614787-28614864)
chr4 (293-350)||(46090778-46090835)
chr4 (242-331)||(46110201-46110290)
chr4 (312-341)||(52428733-52428762)
chr4 (309-349)||(2236945-2236985)
chr4 (274-350)||(3176068-3176144)
chr4 (282-350)||(27721755-27721823)
chr4 (310-350)||(45622307-45622347)
[»] chr2 (52 HSPs)
chr2 (216-336)||(9556209-9556331)
chr2 (244-350)||(27699493-27699599)
chr2 (236-345)||(30552612-30552722)
chr2 (236-333)||(10285852-10285949)
chr2 (239-344)||(28933819-28933923)
chr2 (236-350)||(22681149-22681263)
chr2 (241-347)||(32821806-32821912)
chr2 (247-344)||(15120186-15120283)
chr2 (282-345)||(1494415-1494478)
chr2 (244-351)||(10567057-10567164)
chr2 (229-324)||(43141856-43141951)
chr2 (308-350)||(1318300-1318342)
chr2 (236-350)||(6993688-6993802)
chr2 (283-345)||(13220472-13220534)
chr2 (239-350)||(33942145-33942258)
chr2 (250-336)||(43065428-43065514)
chr2 (248-346)||(44606078-44606176)
chr2 (237-350)||(14316109-14316222)
chr2 (253-350)||(34652000-34652097)
chr2 (237-289)||(1899934-1899986)
chr2 (283-335)||(9878661-9878713)
chr2 (313-349)||(27317449-27317485)
chr2 (244-336)||(35810771-35810863)
chr2 (277-348)||(11063521-11063592)
chr2 (239-350)||(12313137-12313248)
chr2 (254-349)||(33192212-33192306)
chr2 (310-345)||(39622017-39622052)
chr2 (308-347)||(43808622-43808661)
chr2 (308-346)||(4550811-4550849)
chr2 (237-291)||(9477945-9477999)
chr2 (285-347)||(13234547-13234609)
chr2 (308-350)||(13866942-13866984)
chr2 (308-350)||(28803494-28803536)
chr2 (247-349)||(32106764-32106866)
chr2 (237-331)||(33941902-33941996)
chr2 (293-350)||(787381-787438)
chr2 (308-349)||(1741997-1742038)
chr2 (251-344)||(1939302-1939395)
chr2 (308-349)||(7862824-7862865)
chr2 (236-341)||(8017426-8017531)
chr2 (293-346)||(9478348-9478401)
chr2 (277-350)||(9996771-9996844)
chr2 (309-342)||(12140597-12140630)
chr2 (309-350)||(16451184-16451225)
chr2 (251-336)||(35378994-35379079)
chr2 (311-347)||(3973609-3973645)
chr2 (308-348)||(4350754-4350794)
chr2 (283-327)||(14451037-14451081)
chr2 (272-336)||(31096329-31096393)
chr2 (293-349)||(37474814-37474870)
chr2 (237-269)||(43199407-43199439)
chr2 (283-347)||(43456674-43456738)
[»] chr7 (50 HSPs)
chr7 (236-349)||(46082026-46082141)
chr7 (236-349)||(34754775-34754887)
chr7 (229-350)||(48157084-48157205)
chr7 (227-350)||(25670550-25670673)
chr7 (283-350)||(33894666-33894733)
chr7 (282-340)||(30496743-30496801)
chr7 (236-350)||(38010706-38010820)
chr7 (229-350)||(44151440-44151565)
chr7 (239-350)||(33645924-33646035)
chr7 (251-350)||(12242251-12242350)
chr7 (283-350)||(27626087-27626154)
chr7 (277-348)||(28727729-28727800)
chr7 (237-331)||(3610723-3610817)
chr7 (308-350)||(22387860-22387902)
chr7 (246-331)||(34035919-34036005)
chr7 (293-350)||(36537957-36538014)
chr7 (237-298)||(39907796-39907857)
chr7 (239-336)||(44615082-44615179)
chr7 (253-342)||(47427275-47427364)
chr7 (253-349)||(3468623-3468719)
chr7 (253-345)||(5276240-5276332)
chr7 (309-349)||(23214920-23214960)
chr7 (238-350)||(28691800-28691911)
chr7 (283-351)||(39360062-39360130)
chr7 (284-343)||(6857310-6857369)
chr7 (237-348)||(30535556-30535667)
chr7 (283-350)||(36598320-36598387)
chr7 (237-348)||(39542266-39542377)
chr7 (236-267)||(39711453-39711484)
chr7 (241-331)||(9038109-9038198)
chr7 (277-331)||(15740394-15740448)
chr7 (236-274)||(21453286-21453324)
chr7 (244-314)||(24363601-24363671)
chr7 (308-350)||(28340385-28340426)
chr7 (277-347)||(44808191-44808261)
chr7 (237-303)||(44821952-44822018)
chr7 (250-288)||(47046134-47046172)
chr7 (313-350)||(4970755-4970792)
chr7 (269-338)||(17983769-17983838)
chr7 (240-289)||(20881661-20881710)
chr7 (308-349)||(25422390-25422431)
chr7 (293-350)||(28844539-28844596)
chr7 (308-349)||(31003004-31003045)
chr7 (310-350)||(420427-420467)
chr7 (314-346)||(3804405-3804437)
chr7 (251-343)||(7244687-7244779)
chr7 (229-349)||(28165076-28165196)
chr7 (309-341)||(31149705-31149737)
chr7 (309-341)||(31167997-31168029)
chr7 (241-336)||(39967917-39968013)
[»] chr8 (39 HSPs)
chr8 (236-351)||(30389091-30389206)
chr8 (240-350)||(39551173-39551283)
chr8 (277-350)||(8629489-8629562)
chr8 (253-350)||(14949875-14949972)
chr8 (251-350)||(11569421-11569520)
chr8 (229-350)||(2091746-2091869)
chr8 (250-336)||(26473730-26473816)
chr8 (243-348)||(779027-779132)
chr8 (309-350)||(30918177-30918218)
chr8 (250-348)||(7918412-7918510)
chr8 (253-343)||(9540967-9541057)
chr8 (277-347)||(11770978-11771048)
chr8 (308-350)||(30987955-30987997)
chr8 (236-350)||(40071741-40071855)
chr8 (277-350)||(9700034-9700107)
chr8 (277-350)||(31875559-31875632)
chr8 (236-344)||(6509273-6509381)
chr8 (314-350)||(7918745-7918781)
chr8 (293-349)||(9572919-9572975)
chr8 (239-347)||(12851171-12851279)
chr8 (283-350)||(6950361-6950428)
chr8 (308-347)||(30191108-30191147)
chr8 (309-348)||(32840951-32840990)
chr8 (308-350)||(2487972-2488014)
chr8 (308-350)||(4251020-4251062)
chr8 (251-345)||(8060676-8060770)
chr8 (237-347)||(31862486-31862595)
chr8 (308-350)||(41442417-41442459)
chr8 (309-346)||(10120822-10120859)
chr8 (313-350)||(11056630-11056667)
chr8 (293-346)||(26371014-26371067)
chr8 (312-341)||(27412855-27412884)
chr8 (246-335)||(35220702-35220791)
chr8 (308-352)||(5069761-5069805)
chr8 (239-350)||(21130609-21130718)
chr8 (310-350)||(26771332-26771372)
chr8 (310-350)||(31915257-31915297)
chr8 (310-350)||(35534576-35534616)
chr8 (308-336)||(45071438-45071466)
[»] chr6 (47 HSPs)
chr6 (283-350)||(2460115-2460182)
chr6 (236-352)||(4006706-4006822)
chr6 (236-350)||(281812-281926)
chr6 (257-343)||(34939526-34939612)
chr6 (236-348)||(8035114-8035226)
chr6 (293-345)||(8348275-8348327)
chr6 (277-341)||(10616514-10616578)
chr6 (293-351)||(33500443-33500501)
chr6 (236-336)||(30523652-30523751)
chr6 (239-331)||(31624085-31624177)
chr6 (283-343)||(32577957-32578017)
chr6 (277-344)||(9027611-9027678)
chr6 (244-347)||(20368147-20368250)
chr6 (239-349)||(10476087-10476196)
chr6 (310-348)||(32171349-32171387)
chr6 (308-350)||(32917261-32917303)
chr6 (236-341)||(4246402-4246507)
chr6 (250-335)||(7931705-7931790)
chr6 (309-350)||(27857423-27857464)
chr6 (302-338)||(725631-725667)
chr6 (236-324)||(2112192-2112280)
chr6 (269-349)||(33832238-33832318)
chr6 (314-349)||(7485102-7485137)
chr6 (283-350)||(10031771-10031838)
chr6 (293-336)||(20377898-20377941)
chr6 (277-331)||(1575928-1575982)
chr6 (236-274)||(2727896-2727934)
chr6 (283-341)||(4080955-4081013)
chr6 (251-345)||(4324423-4324516)
chr6 (283-341)||(5566150-5566208)
chr6 (293-335)||(30863295-30863337)
chr6 (308-350)||(33116648-33116690)
chr6 (235-335)||(781371-781472)
chr6 (308-345)||(2263256-2263293)
chr6 (252-325)||(3528811-3528884)
chr6 (293-350)||(5731618-5731675)
chr6 (237-274)||(20671905-20671942)
chr6 (308-341)||(31338040-31338073)
chr6 (293-342)||(31594356-31594405)
chr6 (236-301)||(31671087-31671152)
chr6 (308-349)||(33498683-33498724)
chr6 (308-336)||(1669776-1669804)
chr6 (308-348)||(2027764-2027804)
chr6 (314-350)||(2455683-2455719)
chr6 (308-336)||(6310228-6310256)
chr6 (309-349)||(9559503-9559543)
chr6 (283-343)||(30604935-30604995)
[»] chr1 (61 HSPs)
chr1 (190-349)||(7218039-7218199)
chr1 (236-344)||(25005765-25005875)
chr1 (236-346)||(38867799-38867909)
chr1 (236-349)||(25479573-25479686)
chr1 (283-350)||(4868439-4868505)
chr1 (236-335)||(17420195-17420294)
chr1 (231-318)||(27887114-27887201)
chr1 (244-335)||(11639395-11639486)
chr1 (255-350)||(32515405-32515500)
chr1 (236-350)||(3224415-3224529)
chr1 (282-344)||(4548759-4548821)
chr1 (253-331)||(4699598-4699676)
chr1 (283-341)||(6262777-6262835)
chr1 (236-330)||(29045896-29045990)
chr1 (236-350)||(31517704-31517818)
chr1 (241-303)||(35351036-35351098)
chr1 (310-347)||(5591933-5591970)
chr1 (229-350)||(30257668-30257789)
chr1 (244-345)||(33185927-33186027)
chr1 (238-331)||(37842338-37842431)
chr1 (293-350)||(38170654-38170711)
chr1 (293-346)||(42336664-42336717)
chr1 (237-289)||(1432508-1432560)
chr1 (237-301)||(4700079-4700143)
chr1 (308-344)||(8780394-8780430)
chr1 (238-350)||(11695855-11695967)
chr1 (295-347)||(15579533-15579585)
chr1 (236-345)||(28689421-28689532)
chr1 (283-331)||(33108605-33108653)
chr1 (237-317)||(36151502-36151582)
chr1 (236-336)||(39270403-39270503)
chr1 (314-350)||(43371855-43371891)
chr1 (311-350)||(4033981-4034020)
chr1 (282-345)||(4481968-4482031)
chr1 (237-344)||(6279392-6279499)
chr1 (251-342)||(10744308-10744399)
chr1 (235-349)||(35668963-35669075)
chr1 (251-313)||(2522636-2522698)
chr1 (240-349)||(4549506-4549616)
chr1 (236-350)||(17269242-17269356)
chr1 (243-349)||(26779891-26779996)
chr1 (308-350)||(34536222-34536264)
chr1 (298-340)||(45234247-45234289)
chr1 (308-350)||(49692016-49692058)
chr1 (309-350)||(16980868-16980909)
chr1 (236-289)||(26946472-26946525)
chr1 (250-343)||(27963341-27963434)
chr1 (293-350)||(29929585-29929642)
chr1 (295-344)||(37941955-37942004)
chr1 (293-350)||(38001645-38001702)
chr1 (277-334)||(43722308-43722365)
chr1 (236-349)||(44422691-44422804)
chr1 (308-349)||(49521770-49521811)
chr1 (310-350)||(2295163-2295203)
chr1 (314-350)||(4200304-4200340)
chr1 (308-348)||(7356504-7356544)
chr1 (251-303)||(15558224-15558276)
chr1 (283-343)||(24153320-24153380)
chr1 (229-269)||(34179917-34179957)
chr1 (237-289)||(49888760-49888812)
chr1 (310-350)||(50644218-50644258)
[»] chr5 (42 HSPs)
chr5 (237-346)||(10272399-10272508)
chr5 (229-345)||(4619692-4619808)
chr5 (251-335)||(41957430-41957514)
chr5 (247-350)||(37611179-37611282)
chr5 (247-350)||(37787909-37788012)
chr5 (236-350)||(37526163-37526277)
chr5 (236-350)||(37588324-37588438)
chr5 (277-338)||(13604825-13604886)
chr5 (236-349)||(14295498-14295611)
chr5 (237-333)||(37794679-37794774)
chr5 (247-350)||(12242674-12242777)
chr5 (237-343)||(15246826-15246933)
chr5 (293-336)||(29363057-29363100)
chr5 (236-350)||(37690600-37690715)
chr5 (237-350)||(7674641-7674754)
chr5 (236-350)||(10391333-10391448)
chr5 (169-347)||(35960338-35960516)
chr5 (312-348)||(8090004-8090040)
chr5 (298-350)||(10152388-10152440)
chr5 (236-324)||(15003504-15003592)
chr5 (237-348)||(2568651-2568762)
chr5 (236-303)||(7319398-7319465)
chr5 (243-338)||(17368675-17368770)
chr5 (263-350)||(28586730-28586817)
chr5 (308-350)||(10907442-10907484)
chr5 (237-303)||(12425564-12425630)
chr5 (308-350)||(12459965-12460007)
chr5 (294-348)||(14980559-14980613)
chr5 (283-349)||(29590594-29590660)
chr5 (308-346)||(38047847-38047885)
chr5 (293-334)||(5531083-5531124)
chr5 (313-350)||(29336699-29336736)
chr5 (283-336)||(30269711-30269764)
chr5 (277-341)||(2092518-2092582)
chr5 (294-350)||(11457148-11457204)
chr5 (240-336)||(15402807-15402903)
chr5 (310-350)||(15905364-15905404)
chr5 (310-350)||(16457942-16457982)
chr5 (310-350)||(19113083-19113123)
chr5 (236-336)||(19369305-19369405)
chr5 (282-338)||(21768173-21768229)
chr5 (236-340)||(36542256-36542360)
[»] scaffold0311 (1 HSPs)
scaffold0311 (283-350)||(10581-10648)
[»] scaffold0608 (1 HSPs)
scaffold0608 (282-345)||(9606-9669)
[»] scaffold0003 (1 HSPs)
scaffold0003 (250-349)||(306332-306431)
[»] scaffold0024 (1 HSPs)
scaffold0024 (283-349)||(27615-27681)
[»] scaffold0459 (1 HSPs)
scaffold0459 (309-350)||(6611-6652)
[»] scaffold0366 (1 HSPs)
scaffold0366 (309-350)||(6609-6650)


Alignment Details
Target: chr3 (Bit Score: 335; Significance: 0; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 18 - 360
Target Start/End: Complemental strand, 40881244 - 40880902
Alignment:
Q  18 gatggtagcaccaagacctacgaccatgaatgcaaattgaattaggaaatcatatactcaacctagttatatattaatatctcaatgcaagcatatatta 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40881244 gatggtagcaccaagacctaagaccatgaatgcaaattgaattaggaaatcatatactcaacctagttatatattaatatctcaatgcaaggatatatta 40881145  T
Q  118 tacactacttggataaacagcttaattaataagagtttacaatataagcccttatcatttaagtacttactcataagctatttccataatgaaatataaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881144 tacactacttggataaacagcttaattaataagagtttacaatataagcccttatcatttaagtacttactcataagctatttccataatgaaatataaa 40881045  T
Q  218 aataaagtcagtgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataa 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881044 aataaagtcagtgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataa 40880945  T
Q  318 gttgttttcataagctctctcaaacagtctcacgtatgttcat 360  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40880944 gttgttttcataagctctctcaaacagtctcacgtatgttcat 40880902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 37273135 - 37273240
Alignment:
Q  245 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 344  Q
    ||||| ||||||||||| ||||| | ||||| ||||  ||||||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||||||    
T  37273135 ataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacag 37273234  T
Q  345 tctcac 350  Q
    ||||||    
T  37273235 tctcac 37273240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 2175926 - 2175816
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||||||||| ||||||||| ||| ||||  ||||| ||| ||||| |||||| |||||   ||||||||||||||||||||||| || |    
T  2175926 atataagctataaattgttt-cataaactacccttgagagtttatagaaacaagttgaaaacagcttacaaacatgtcataagttgttttcataaactat 2175828  T
Q  336 ctcaaacagtct 347  Q
    |||||| |||||    
T  2175827 ctcaaatagtct 2175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 36646460 - 36646349
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||| ||||| |||||||||||| ||||||||||||  ||||| ||||||| | |||||| |||| || |||| ||||||| |||| ||||||||||    
T  36646460 atataagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctct 36646361  T
Q  336 ctcaaacagtct 347  Q
    | |||| |||||    
T  36646360 cccaaatagtct 36646349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 331
Target Start/End: Original strand, 41724203 - 41724299
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttata-aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    |||||||||||||| ||||||||| | ||||||| ||||  ||||| |||||||| | ||||||||||| || ||||||||||||||||| ||||||    
T  41724203 atataagctataaactgttttcatcagctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcataagttgtttccataag 41724299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 43115048 - 43115162
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||| |||||||||| ||||||| | ||||  ||||  ||||||| | ||||||| ||| || ||||||||||||||||| ||||| ||||    
T  43115048 atataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactct 43115147  T
Q  336 ctcaaacagtctcac 350  Q
      |||||| ||||||    
T  43115148 tccaaacaatctcac 43115162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 25182992 - 25182951
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25182992 atgtcataagttgttttcataagctctctcaaacagtctcac 25182951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 34707525 - 34707460
Alignment:
Q  285 ataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| ||||||||||| || ||||||| |||||||||||| ||| ||||||||||||||||||    
T  34707525 ataagttgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctcac 34707460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 350
Target Start/End: Original strand, 1809983 - 1810083
Alignment:
Q  250 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    |||||||||||| ||||||||   || ||||| |||||||   ||||||||| | || ||||||||||||||||| | |||||||||||||| |||||||    
T  1809983 ttgttttcataagctatcctacgaaacttatagaaataagcagaaaacaactcatggacatgtcataagttgtttccgtaagctctctcaaatagtctca 1810082  T
Q  350 c 350  Q
    |    
T  1810083 c 1810083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 2152238 - 2152162
Alignment:
Q  254 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataa 330  Q
    |||||||||||||||| ||||  ||||| ||| ||||| |||||| ||||||  |||||||||||||||||||||||    
T  2152238 tttcataaactatccttgagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttttcataa 2152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 343
Target Start/End: Original strand, 24281044 - 24281146
Alignment:
Q  240 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 339  Q
    |||||||||| |||| |||||  ||||| | ||||  |||| ||| |||||| ||||||||||| ||  || ||||||||||||||||||||||||||||    
T  24281044 aagctataaactgttgtcatag-ctatcatggagagcttatgaaagtaagttgaaaacaacttatggagatatcataagttgttttcataagctctctca 24281142  T
Q  340 aaca 343  Q
    ||||    
T  24281143 aaca 24281146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 14548799 - 14548685
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||| ||||||||||||  ||| || ||||  ||||  ||||||| | |||||| | ||     |||||||| ||||||||||||||||||    
T  14548799 atataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctct 14548700  T
Q  336 ctcaaacagtctcac 350  Q
    |||||||||||||||    
T  14548699 ctcaaacagtctcac 14548685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 335
Target Start/End: Complemental strand, 39602287 - 39602189
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||| |||||  ||||||||||| ||||| | ||||| |||| |||||||||| ||||||| ||| |  ||||||||||| ||| ||||||||||||    
T  39602287 tataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataagctct 39602189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 21574554 - 21574595
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  21574554 catgtcataagttgttttcataagctctcccaaacagtctca 21574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 1217863 - 1217779
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||| ||||||| ||||| |||| ||| |||| | ||||||||||| || ||||||||||| ||||| | ||||||||    
T  1217863 tgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttccgtaagctct 1217779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 350
Target Start/End: Complemental strand, 30923961 - 30923863
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| ||||||||||||  ||||| ||||||| | |||||| ||||  | ||||||||||| ||||| ||| |||||||  ||||||||||||    
T  30923961 tgttttcataacctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttccat-agctctcataaacagtctcac 30923863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 3015880 - 3015822
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||| |||||||| | |||||| |||| || ||||||||||||||||||||||||||||    
T  3015880 ttattaaaataagatgaaaacatcttatggacatgtcataagttgttttcataagctct 3015822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 11039360 - 11039303
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| || ||||||||||  ||||| |||||||||| ||||||||||||||    
T  11039360 aaaacaacttatggacatgtcataatatgtttccataagctctttcaaacagtctcac 11039303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 332
Target Start/End: Complemental strand, 22214737 - 22214641
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagc 332  Q
    |||||| |||||| |||||||||||| ||||||||||||  |||   ||||||| | |||||| |||| || ||||||| | ||| |||||||||||    
T  22214737 atataacctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgtcaaatgtttttttcataagc 22214641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 29113454 - 29113566
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||||| | ||||||| || ||||||| |  |||| |||||||  | |||| | ||||  | ||||| |||||||||||   ||||||||    
T  29113454 atataagctataaattttgttcataagctgtcctagaaagcttatgaaaataaaatgaaaatagcttataggcatgttataagttgtttctgtaagctct 29113553  T
Q  336 ctcaaacagtctc 348  Q
    |||||||||||||    
T  29113554 ctcaaacagtctc 29113566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 38462273 - 38462372
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||| |||||||| ||||||||||| |||||| ||| |  ||||  ||||||| | ||||||||||| ||||| ||||||| ||||||  |||||||||    
T  38462273 atatatgctataaactgttttcataagctatccaagatagcttatggaaataagctgaaaacaacttatggtcaagtcataa-ttgtttgtataagctct 38462371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 345
Target Start/End: Original strand, 2719463 - 2719570
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataagctctct 337  Q
    ||||||||||| ||||||||||| ||||| | ||||| |||| |||||||| | | ||||||||| || | ||    |||||||||||| |||| |||||    
T  2719463 taagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggacaatagtttaagttgttttcctaagttctct 2719562  T
Q  338 caaacagt 345  Q
    ||||||||    
T  2719563 caaacagt 2719570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 30750049 - 30750105
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 351  Q
    |||||| |||| || |||||||||||||||||||||  ||||||||||| |||||||||    
T  30750049 aaaacagcttatggacatgtcataagttgttttcat--gctctctcaaatagtctcacg 30750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 36200135 - 36200202
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| | ||||||||||| || ||||||||||||||||| || || ||||||| |||| ||||||    
T  36200135 aaataagctgaaaacaacttatggacatgtcataagttgtttacaaaaactctctccaacattctcac 36200202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 350
Target Start/End: Original strand, 41452530 - 41452629
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| ||||||| |||||||| |  ||||||| | |||||| ||||  | ||| |||||||||||||  ||||| ||||||||| | ||||||    
T  41452530 tgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagttgtttctataaggtctctcaaatactctcac 41452629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 42817243 - 42817192
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 344  Q
    ||||||||||| || ||||||||| | ||||| |||||||||||||||||||    
T  42817243 aaaacaacttatggacatgtcatatgctgtttccataagctctctcaaacag 42817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 47132022 - 47132097
Alignment:
Q  272 agaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 347  Q
    |||| ||||||||||||| | ||||||  ||| ||  ||| ||||||||||||||||||| ||||||||| |||||    
T  47132022 agaacttataaaaataagctgaaaacagtttatggatatgacataagttgttttcataagttctctcaaatagtct 47132097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 2606316 - 2606278
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  2606316 catgtcataagttgtttccataagatctctcaaacagtc 2606278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 34414845 - 34414759
Alignment:
Q  253 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 339  Q
    ||||||||||||||| | ||||  |||| |||||||| | ||||||||||| |  |||| ||||  |||||||||||||||| ||||    
T  34414845 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 34414759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 50015950 - 50015992
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||    
T  50015950 catgtcatacgttcttttcataagttctctcaaacagtctcac 50015992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 20195038 - 20194997
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||  ||||||||||||||||| |||||||||||||    
T  20195038 atgtcataaactgttttcataagctctcacaaacagtctcac 20194997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 40904422 - 40904373
Alignment:
Q  49 gcaaattgaattaggaaatcatatactcaacctagttatatattaatatc 98  Q
    ||||||||||||| |||| |||| ||||| ||||||||||| ||||||||    
T  40904422 gcaaattgaattacgaaaacatagactcatcctagttatatgttaatatc 40904373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 347
Target Start/End: Original strand, 50211805 - 50211838
Alignment:
Q  314 ataagttgttttcataagctctctcaaacagtct 347  Q
    |||||||||||||||||| |||||||||||||||    
T  50211805 ataagttgttttcataagttctctcaaacagtct 50211838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 659880 - 659824
Alignment:
Q  294 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||| || ||||||||||| |||||  || ||||||| |||||||||||||    
T  659880 aaacaacttatggacatgtcataagctgtttctattagctctcacaaacagtctcac 659824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 1395703 - 1395743
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    |||||| |||||||||||  |||||||||||||||||||||    
T  1395703 catgtcttaagttgtttttgtaagctctctcaaacagtctc 1395743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 20170918 - 20170958
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||| |||||||||  ||||||||||||    
T  20170918 atgtcataagttgtttttataagctcttacaaacagtctca 20170958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 24624217 - 24624313
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||||||||  |||||||||| |  ||||   |||||| | ||||||  ||| || ||||||||||| ||||||||||||||||  ||||||||||    
T  24624217 tgttttcataggctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaacagtct 24624313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 27290932 - 27290880
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||| | |||||| |||| || ||||||||||| ||||||||||||||||    
T  27290932 aaataagctgaaaacagcttatgggcatgtcataagctgttttcataagctct 27290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 29771877 - 29771945
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 351  Q
    ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||  ||| |||||||||    
T  29771877 aaataagttgaaaacaacttatggacatgtcctaagttgtttctttaagctctcataaatagtctcacg 29771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 30443960 - 30444000
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  30443960 tgtcataagctgttttcataagctctaccaaacagtctcac 30444000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 48323816 - 48323852
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaa 275  Q
    |||||||||||||||||||||||| |||| |||||||    
T  48323816 taagctataaattgttttcataaattatcatagagaa 48323852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 2996565 - 2996678
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||| ||||| |||||||||||| ||||| | ||||   ||| |||||||||| |||| | |||| || ||||||||||||||||||||||||||||    
T  2996565 atataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctct 2996664  T
Q  336 ctcaaacagtctca 349  Q
    ||||||||||||||    
T  2996665 ctcaaacagtctca 2996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 27123383 - 27123316
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||    
T  27123383 aaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcac 27123316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 6428065 - 6428124
Alignment:
Q  291 ttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||| ||||||| || ||||||||||||||||||||||| ||||||||||| |||||||    
T  6428065 ttaaatcaacttatggacatgtcataagttgttttcataatctctctcaaactgtctcac 6428124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 45128388 - 45128281
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||||||||||||||||||| ||||| | |  ||||  ||||||| | |||||| || | || ||||  || |||||||| ||||||||||    
T  45128388 atataagctataaattgttttcataaactgtcctataaagcttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctct 45128289  T
Q  336 ctcaaaca 343  Q
    ||||||||    
T  45128288 ctcaaaca 45128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 53315318 - 53315429
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  |||| ||| |||| | ||||||||  |||| |||||||||| |||| | |||| || ||||| ||| ||||||||||||||||||    
T  53315318 atataagctataagctgttctcaaaaacaaacctagagagcttatgaaaataagttaaaaatagcttatggacatgtgatatgttgttttcataagctct 53315417  T
Q  336 ctcaaacagtct 347  Q
    | |||| |||||    
T  53315418 cacaaatagtct 53315429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 11264301 - 11264407
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||| |||||||||||| | ||||||||||  ||||  ||||||||| ||||||  ||| || |||||||||||||| ||  ||| |||||| ||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaaca 11264400  T
Q  344 gtctcac 350  Q
    |||||||    
T  11264401 gtctcac 11264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 23819081 - 23819195
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||| |||||  ||||||||||| ||||| |  |||  ||||| ||||||| | ||||||||||| || ||||||||||| ||||||| ||| ||||    
T  23819081 atataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactct 23819180  T
Q  336 ctcaaacagtctcac 350  Q
      |||||||||||||    
T  23819181 tccaaacagtctcac 23819195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 30207649 - 30207535
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||| |||||||||||| ||| | ||||||  ||||  ||||||| | |||||| ||||| | ||||||||| | |||| | |||||||||    
T  30207649 atataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatgtcatatgctgttcttataagctct 30207550  T
Q  336 ctcaaacagtctcac 350  Q
    ||| | |||||||||    
T  30207549 ctcgatcagtctcac 30207535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 350
Target Start/End: Complemental strand, 33534253 - 33534133
Alignment:
Q  230 gtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcata 329  Q
    ||||| |||||| ||| || |||||||| |||| |||  | ||||  |||| |||||||| | ||||||||||| ||  |||||| || |||||||||||    
T  33534253 gtttctatataatctacaagttgttttcgtaaattatttttgagagcttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttttcata 33534154  T
Q  330 agctctctcaaacagtctcac 350  Q
    |||||||||||| | ||||||    
T  33534153 agctctctcaaatactctcac 33534133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 1965980 - 1966046
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||| |||| |  ||||||||||||||||||||||||||| || ||||||||||||    
T  1965980 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataagctc-ctaaaacagtctcac 1966046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 4071946 - 4071984
Alignment:
Q  312 tcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  4071946 tcataagctgttttcataagctctctcaaacagtctcac 4071984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 18628555 - 18628517
Alignment:
Q  312 tcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcac 18628517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 44319941 - 44320055
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||| ||  | |||| |||| ||||||||||||| |||| ||||| |||| |||| | || | ||  |  |||||| |||||||||||||||||    
T  44319941 atataagctacaagctattttgataagctatcctagagaacttatgaaaattagttgaaaatagctaatggatacatcataatttgttttcataagctct 44320040  T
Q  336 ctcaaacagtctcac 350  Q
    | |||||||||||||    
T  44320041 cccaaacagtctcac 44320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 4691881 - 4691954
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||| |||||||| | |||||||| || || ||||||||||||||||| |||||| | ||||||| ||||||||    
T  4691881 ttatgaaaataagctgaaaacaacatatgggcatgtcataagttgtttccataagttttctcaaatagtctcac 4691954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 25583641 - 25583698
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||  || ||||||||||||||||| ||||||| ||| |||||||||||||    
T  25583641 aaaacaacttttggacatgtcataagttgtttgcataagcgctcccaaacagtctcac 25583698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 28300376 - 28300267
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||||||||| | ||||||||  ||||| |  |||  |||| |||||||||| ||||||||||| |  ||||||||| | |||||||||||  ||||    
T  28300376 tataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctc 28300277  T
Q  337 tcaaacagtc 346  Q
    |||| |||||    
T  28300276 tcaatcagtc 28300267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 49219131 - 49219240
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||| |||||||||||||||||| || |||  ||||  ||||||| | ||||||||||| ||  |||  || | ||||||||||||| |||    
T  49219131 atataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatggagatgctattaattgttttcataaggtct 49219230  T
Q  336 ctcaaacagt 345  Q
    |  |||||||    
T  49219231 cctaaacagt 49219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 1137722 - 1137818
Alignment:
Q  254 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||| |||||  ||||  ||||||  | ||||||||||| |  ||||||||||| |||||||||||| ||||  ||||||| ||||    
T  1137722 tttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagtgtcac 1137818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 10192276 - 10192388
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacg----gtcatgtcataagttgttttcataag 331  Q
    ||||||| ||||| ||||||||| || ||||||| |||| | ||| |||||||||| |||||||||||||      ||||| ||||||| |||| |||||    
T  10192276 atataagttataagttgttttcaaaagctatcctggaga-gctatgaaaataagttgaaaacaacttacgaacatgcatgttataagttatttttataag 10192374  T
Q  332 ctctctcaaacagt 345  Q
     |||||||||||||    
T  10192375 ttctctcaaacagt 10192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 345
Target Start/End: Original strand, 31642258 - 31642294
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagt 345  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31642258 atgtcataagttgttttcataagttctctcaaacagt 31642294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 350
Target Start/End: Complemental strand, 55870417 - 55870306
Alignment:
Q  238 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 337  Q
    ||||||||||| |||||||||||| |||  | |||||  |||||| | ||| ||||||||| |||| || || |||||||  | |||||||||||| |||    
T  55870417 ataagctataagttgttttcataagctaatcaagagagcttataata-taattttaaaacagcttatggacaggtcataaacttttttcataagctatct 55870319  T
Q  338 caaacagtctcac 350  Q
    |||| ||||||||    
T  55870318 caaagagtctcac 55870306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 6987772 - 6987705
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||| |  ||| || ||||||||||||||| | ||||||||||| |||||||||||||    
T  6987772 aaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctcac 6987705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 52419624 - 52419585
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  52419624 catgtaataagttgttttcataaggtctctcaaacagtct 52419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 2841675 - 2841733
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 351  Q
    |||||||||||  | |||||||||||||| |||||||| ||||| |||||| |||||||    
T  2841675 aaaacaacttattgacatgtcataagttgctttcataaactctcgcaaacaatctcacg 2841733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 7368060 - 7368018
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||    
T  7368060 catgtcataagctgttttcatgagctctcccaaacagtctcac 7368018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 16494882 - 16494816
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 303  Q
    |||||||||||| |||||||||||| ||||| | ||||  || ||||| |||||| |||||||||||    
T  16494882 tataagctataagttgttttcataagctatcttggagagcttgtaaaactaagttgaaaacaactta 16494816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Original strand, 27725278 - 27725316
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  27725278 catgtcataagttatttccataagctctctcaaacagtc 27725316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 349
Target Start/End: Complemental strand, 46415862 - 46415756
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc-aaac 342  Q
    ||||| || ||||||||| ||||||| ||||  |||  ||||| || | ||||||||||| || ||||||||| ||||||| ||||| ||||| | ||||    
T  46415862 tataagttcttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcataggttgtttgcataaactctcccaaaac 46415763  T
Q  343 agtctca 349  Q
    |||||||    
T  46415762 agtctca 46415756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 347
Target Start/End: Complemental strand, 50742905 - 50742803
Alignment:
Q  245 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 344  Q
    |||| |||||||||||| ||||||| ||||  |||| ||||| |||| ||||||   || |  |||||||| |  |||||||||||| ||||||||||||    
T  50742905 ataacttgttttcataagctatcctggagagcttatgaaaatgagttgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 50742806  T
Q  345 tct 347  Q
    |||    
T  50742805 tct 50742803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 339
Target Start/End: Complemental strand, 21683533 - 21683504
Alignment:
Q  310 tgtcataagttgttttcataagctctctca 339  Q
    ||||||||||||||||||||||||||||||    
T  21683533 tgtcataagttgttttcataagctctctca 21683504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 25904223 - 25904186
Alignment:
Q  313 cataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  25904223 cataagctgttttcataagctctcccaaacagtctcac 25904186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 28614864 - 28614787
Alignment:
Q  258 ataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||| ||||||||||||| |||| |||||||| | |||| | |||| ||  ||||||||| |||||| ||||||||||    
T  28614864 ataagctatcctagagaacttatgaaaataagctgaaaagagcttatggatatgtcataaattgtttccataagctct 28614787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 46090835 - 46090778
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||  |||||| |||| |||||||||||||| ||||| ||||||||||    
T  46090835 aaaacaactaacgaacatgtcttaagctgttttcataagctatctcatacagtctcac 46090778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 46110201 - 46110290
Alignment:
Q  242 gctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    |||||||| ||||||||||| ||||  | ||||  ||||| ||||||| | ||||||||||| |   || ||||||||||||||||||||    
T  46110201 gctataaactgttttcataagctatgattgagagcttatagaaataagctgaaaacaacttatgagtatatcataagttgttttcataag 46110290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 341
Target Start/End: Original strand, 52428733 - 52428762
Alignment:
Q  312 tcataagttgttttcataagctctctcaaa 341  Q
    ||||||||||||||||||||||||||||||    
T  52428733 tcataagttgttttcataagctctctcaaa 52428762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 2236985 - 2236945
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    |||| |||||||||||||||||| | |||||||||||||||    
T  2236985 atgtgataagttgttttcataagttatctcaaacagtctca 2236945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 3176144 - 3176068
Alignment:
Q  274 aagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||  ||||||| | |||||||||||  | |||| |||||| |||||||||||||||||  ||||||| ||||    
T  3176144 aagttatggaaataagctgaaaacaacttatagacatgacataagatgttttcataagctctcctaaacagtttcac 3176068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 27721755 - 27721823
Alignment:
Q  282 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||| | |||||| |||| ||  ||||||||||| ||||| ||||||||||| ||||| ||||||    
T  27721755 aaaataagctgaaaacagcttatggatatgtcataagtagtttttataagctctcttaaacaatctcac 27721823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 45622307 - 45622347
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||||||||||||| |||| | |||||||||||    
T  45622307 tgtcataagttgttttcataagttctcccgaacagtctcac 45622347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 9556209 - 9556331
Alignment:
Q  216 aaaataaagtca--gtgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtc 313  Q
    ||||||||||||  ||||||  ||| |||||||||| ||||||||||| |||||||||| |  |||| |||||||||| ||| | ||||| || ||||||    
T  9556209 aaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtc 9556308  T
Q  314 ataagttgttttcataagctctc 336  Q
    || ||||||||||||||||||||    
T  9556309 attagttgttttcataagctctc 9556331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 27699599 - 27699493
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||| |||||||||||||||||| | |||||   ||  ||||||| | |||||| | |  ||| |||||||||||||||||||||| ||||||||||||    
T  27699599 tataagttgttttcataaactatcatggagaatcgatggaaataagctgaaaacagcatgtggtgatgtcataagttgttttcataaactctctcaaaca 27699500  T
Q  344 gtctcac 350  Q
    |||||||    
T  27699499 gtctcac 27699493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 345
Target Start/End: Complemental strand, 30552722 - 30552612
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaa-caacttacggtcatgtcataagttgttttcataagctc 334  Q
    |||| ||||||||||| ||||||||||||||||||||||  ||||  ||||||| | |||| |||||||  | |||||||||||||||||  |||| ||     
T  30552722 atatcagctataaattattttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtcataagttgtttcgataaccta 30552623  T
Q  335 tctcaaacagt 345  Q
    |||||||||||    
T  30552622 tctcaaacagt 30552612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 333
Target Start/End: Original strand, 10285852 - 10285949
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 333  Q
    ||||||||||||| | |||| ||||| ||| | ||||||| ||||  ||||||||| |||||| |||| || ||||||||||||| ||||||||||||    
T  10285852 atataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagttattttcataagct 10285949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 28933819 - 28933923
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    |||| |||||||||||||||||| ||||||||||||  | ||| ||||||||| |||||| | || |  |||| |||||||||||||||||||||||  |    
T  28933819 taagttataaattgttttcataagctatcctagagagctgatagaaataagttgaaaacagc-tatgaacatgccataagttgttttcataagctcttcc 28933917  T
Q  339 aaacag 344  Q
    ||||||    
T  28933918 aaacag 28933923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 22681263 - 22681149
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  ||||||||||| ||||||||||||| ||||  ||||||| | |||||| |||| |  ||||| ||  |||||||||||||   ||    
T  22681263 atataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttttcataaaaact 22681164  T
Q  336 ctcaaacagtctcac 350  Q
    |||||||| ||||||    
T  22681163 ctcaaacattctcac 22681149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 32821806 - 32821912
Alignment:
Q  241 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaa 340  Q
    ||||||||| ||||||||||| |||||||| |||  ||||| ||||||  | |||||| |||| || |||||||||||||||||  |||| ||||  |||    
T  32821806 agctataaactgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaa 32821905  T
Q  341 acagtct 347  Q
    |||||||    
T  32821906 acagtct 32821912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 344
Target Start/End: Original strand, 15120186 - 15120283
Alignment:
Q  247 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 344  Q
    ||||||||||| ||| ||||| | ||||  |||| |||||||| |||||||| || | |  ||||||||||||||||| ||||||||||| |||||||    
T  15120186 aaattgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacag 15120283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 1494478 - 1494415
Alignment:
Q  282 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 345  Q
    |||||||| | ||||||  ||| || ||||||||||| ||||||||||||||||||||||||||    
T  1494478 aaaataagctaaaaacagtttatggacatgtcataagctgttttcataagctctctcaaacagt 1494415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 10567057 - 10567164
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    |||||| ||||| |||||||||| || ||||  || | ||||| || | ||||||||||| | |||||||||||| ||||| || || ||||| ||||||    
T  10567057 tataaactgtttccataaactattctggagagcttgtgaaaattagctgaaaacaacttatgatcatgtcataagctgtttccacaatctctcccaaaca 10567156  T
Q  344 gtctcacg 351  Q
    ||||||||    
T  10567157 gtctcacg 10567164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 43141856 - 43141951
Alignment:
Q  229 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 324  Q
    |||||| |||||||||||||  ||||||||||| |||||||  |||  ||||  ||||||  | ||||||||||| || |||||||||||||||||    
T  43141856 tgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataagttgttt 43141951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 1318300 - 1318342
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  1318300 catgtcataagatgttttcataagctctcacaaacagtctcac 1318342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 6993802 - 6993688
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||  |||||||||||| |||| || ||||  |||| |||||||| | ||||  ||||| || |||| |||||| | ||| |||||| |||    
T  6993802 atataagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaatgacttatggacatgccataagctatttacataagttct 6993703  T
Q  336 ctcaaacagtctcac 350  Q
     ||||||||||||||    
T  6993702 atcaaacagtctcac 6993688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 13220472 - 13220534
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 345  Q
    |||||||||||||||| |||| |  || ||||||||||||||| ||||| |||||||||||||    
T  13220472 aaataagtttaaaacagcttatgaacaagtcataagttgtttttataagttctctcaaacagt 13220534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 350
Target Start/End: Original strand, 33942145 - 33942258
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt--cataagctctc 336  Q
    |||||||||| |||||||||||| | ||| ||||||  | || ||||| || | |||||| |||| |  ||||||||||||||| |   |||||||||||    
T  33942145 taagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtcataagttgtctctccataagctctc 33942244  T
Q  337 tcaaacagtctcac 350  Q
    ||||||||||||||    
T  33942245 tcaaacagtctcac 33942258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 43065514 - 43065428
Alignment:
Q  250 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||||||||  |||| | ||||  ||||  ||||||| | ||||||| ||| || |||||||||||||||||||||||||||||    
T  43065514 ttgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 346
Target Start/End: Complemental strand, 44606176 - 44606078
Alignment:
Q  248 aattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||||  ||| ||| |  | |||| ||||| || | ||||||||||| || |||||||||||||||||||||||| |||  |||||||||    
T  44606176 aattgttttcataagttattctaaaacacttatgaaaatcagctgaaaacaacttatggacatgtcataagttgttttcataagttcttccaaacagtc 44606078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 350
Target Start/End: Complemental strand, 14316222 - 14316109
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||||||||||| ||||||||  | ||| | |||||| |||| ||||||| | |||||| ||||     |||||||||||||||| |||||||||||    
T  14316222 tataagctataaattattttcatatgcaatctttgagaagctatagaaataagctgaaaacagcttatacatatgtcataagttgtttccataagctctc 14316123  T
Q  337 tcaaacagtctcac 350  Q
      ||| ||||||||    
T  14316122 caaaatagtctcac 14316109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 350
Target Start/End: Complemental strand, 34652097 - 34652000
Alignment:
Q  253 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| ||||| | ||||  ||||  ||||||||| |||||| |||| || |||||||||||||||||  ||||||| |||| ||| |||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataagctttctccaaccgtctcac 34652000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 1899934 - 1899986
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 289  Q
    ||||||||||||| |||||||||||||||| ||| |||  |||||||||||||    
T  1899934 tataagctataaaatgttttcataaactattctaaagagtttataaaaataag 1899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 9878713 - 9878661
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||  ||||||||||| || ||||||||||||||||| ||||||||||    
T  9878713 aaataagtcgaaaacaacttatggacatgtcataagttgtttccataagctct 9878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 27317449 - 27317485
Alignment:
Q  313 cataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||||| |||||||||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctca 27317485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 35810863 - 35810771
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    |||| ||||||||||||  ||||||||||||| |||| ||| |||| | |||| |||||| || || | ||||||||||||  ||||||||||    
T  35810863 tatatattgttttcatacgctatcctagagaacttatgaaagtaagctaaaaataacttatggccaggccataagttgtttctataagctctc 35810771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 11063521 - 11063592
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    |||| |||||||| | ||||||||||| || ||||||||||  ||||| ||||||||||  |||||||||||    
T  11063521 ttatgaaaataagctaaaaacaacttatggacatgtcataatatgtttccataagctcttccaaacagtctc 11063592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 350
Target Start/End: Complemental strand, 12313248 - 12313137
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    ||||||| ||||||||| ||||| ||||| | ||||  |||| |||||||| | ||| ||||||| |  |||| |||||| |||||||||||  |||| |    
T  12313248 taagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctccc 12313149  T
Q  339 aaacagtctcac 350  Q
    ||||| ||||||    
T  12313148 aaacaatctcac 12313137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 349
Target Start/End: Original strand, 33192212 - 33192306
Alignment:
Q  254 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    |||||||| ||||||| ||||  ||||||| ||||| | |||||| |||| ||  |||||||||  |||||||||||| ||| |||||||||||||    
T  33192212 tttcataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataaactgttttcataagttct-tcaaacagtctca 33192306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 345
Target Start/End: Original strand, 39622017 - 39622052
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagt 345  Q
    |||||||||||||||||||||| |||||||||||||    
T  39622017 tgtcataagttgttttcataagttctctcaaacagt 39622052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 43808622 - 43808661
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  43808622 catgtcataagttattttcataagctctctcaaatagtct 43808661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Original strand, 4550811 - 4550849
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  4550811 catgtcataagttgtttccataagctctcccaaacagtc 4550849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 9477945 - 9477999
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtt 291  Q
    |||||| ||||| |||||||||||| ||||||| |||| ||||| ||||||||||    
T  9477945 tataagttataagttgttttcataagctatcctggagaggttatgaaaataagtt 9477999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 13234547 - 13234609
Alignment:
Q  285 ataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||||| ||||||||||| || ||||||||||  ||||||  ||||| ||||||||||||||    
T  13234547 ataagttgaaaacaacttatggacatgtcataatgtgtttttgtaagcactctcaaacagtct 13234609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 13866942 - 13866984
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||    
T  13866942 catgtcataggttgttttcttaagttctctcaaacagtctcac 13866984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 28803536 - 28803494
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||| |||| | ||||||||||||||||||    
T  28803536 catgtcataagttgtttccatatgttctctcaaacagtctcac 28803494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 349
Target Start/End: Complemental strand, 32106866 - 32106764
Alignment:
Q  247 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 346  Q
    |||||| ||||||||  ||||||  |||  |||| || |||| || |||||| ||||| |  |||||||||| |||||||||||| |||| |||||||||    
T  32106866 aaattgctttcataagttatcctgaagagcttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataagttctcacaaacagtc 32106767  T
Q  347 tca 349  Q
    |||    
T  32106766 tca 32106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 33941902 - 33941996
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    |||||| ||||| |||||||||||| ||||| | ||||  |||| | |||||||| ||| || |||| |  | ||||||||||||||||||||||    
T  33941902 tataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcataag 33941996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 787381 - 787438
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||| |||| || ||||||||||| |||||||||||| |||| |||||||| ||||    
T  787381 aaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcac 787438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 1742038 - 1741997
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  1742038 catgtcataagttgtttccataagctctcccaaatagtctca 1741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 344
Target Start/End: Complemental strand, 1939395 - 1939302
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 344  Q
    ||||||||||| |||| || ||||  ||||  ||||||||| |||||| |||| || |||||||||||||||| | | || |||||| ||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttattacaatctctctaaaacag 1939302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 7862824 - 7862865
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||    
T  7862824 catgttataagttgttttcgtaagctctctcgaacagtctca 7862865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 8017426 - 8017531
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||| |||| ||||||||||| ||||| | ||||| |||| |||||| |   ||||||| ||| |  ||| ||||||| |||||||||||| |||    
T  8017426 atataagctgtaaactgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgttttcataagttct 8017525  T
Q  336 ctcaaa 341  Q
    | ||||    
T  8017526 cccaaa 8017531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 9478348 - 9478401
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 346  Q
    |||||| |||| || ||||| ||||||||||| ||||| |||||||||||||||    
T  9478348 aaaacagcttatggacatgtaataagttgtttgcataaactctctcaaacagtc 9478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 9996771 - 9996844
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||| |||||||||| | ||||| ||| ||  ||||||||||||||||  |||||||||| ||| |||||||||    
T  9996771 ttatgaaaataagttgagaacaatttatgggtatgtcataagttgtttctataagctctcccaagcagtctcac 9996844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 12140597 - 12140630
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaac 342  Q
    ||||||||||||||||||||||| ||||||||||    
T  12140597 atgtcataagttgttttcataagttctctcaaac 12140630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 16451184 - 16451225
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||||||||| |||| ||||| |||||||    
T  16451184 atgtcataagttgttttcataagttctcccaaacggtctcac 16451225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 336
Target Start/End: Complemental strand, 35379079 - 35378994
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||||||| ||||| | ||||  |||| |||||||| | ||||||||||| |  || ||||| || |||||||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctc 35378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 347
Target Start/End: Original strand, 3973609 - 3973645
Alignment:
Q  311 gtcataagttgttttcataagctctctcaaacagtct 347  Q
    |||||||||||||| |||| |||||||||||||||||    
T  3973609 gtcataagttgtttccatatgctctctcaaacagtct 3973645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 4350754 - 4350794
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    ||||||||||| |||||||||||| ||||||||||| ||||    
T  4350754 catgtcataagctgttttcataagttctctcaaacaatctc 4350794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 14451081 - 14451037
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttca 327  Q
    ||||||| | |||||| |||| |||||||||||||||||||||||    
T  14451081 aaataagctgaaaacagcttatggtcatgtcataagttgttttca 14451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 31096329 - 31096393
Alignment:
Q  272 agaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    |||| |||| ||||||||||||||||| |||| || ||||| || |  |||||||||||||||||    
T  31096329 agaacttatgaaaataagtttaaaacagcttatggacatgttattaactgttttcataagctctc 31096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 37474814 - 37474870
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||| | || ||| ||| |||| ||||||||||||||||||||| |||||||    
T  37474814 aaaacaactaatggacatatcacaagtagttttcataagctctctcaaagagtctca 37474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 43199407 - 43199439
Alignment:
Q  237 tataagctataaattgttttcataaactatcct 269  Q
    |||||||||||| ||||||||||||||||||||    
T  43199407 tataagctataagttgttttcataaactatcct 43199439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 43456738 - 43456674
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||||| | ||||||  ||| || |||||||| ||||||||||| ||||||| |||||||||||    
T  43456738 aaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctctttcaaacagtct 43456674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 46082026 - 46082141
Alignment:
Q  236 atataagctataaattgttttcataaac--tatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 333  Q
    ||||||| ||||| ||||||||||| ||  ||| || ||||  |||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  46082026 atataagttataagttgttttcatagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagct 46082125  T
Q  334 ctctcaaacagtctca 349  Q
    |||   ||||||||||    
T  46082126 ctcattaacagtctca 46082141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 34754887 - 34754775
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||  ||| |||||||||||||||||||| ||||  | ||  ||||||| | |||||||||||  | | ||||||||| ||||||| ||||||||    
T  34754887 atataagccgtaagttgttttcataaactatcct-gagagctgatggaaataagctgaaaacaacttataggcttgtcataagatgttttcttaagctct 34754789  T
Q  336 ctcaaacagtctca 349  Q
    ||||||||||||||    
T  34754788 ctcaaacagtctca 34754775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 350
Target Start/End: Complemental strand, 48157205 - 48157084
Alignment:
Q  229 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 328  Q
    ||||| |||||||||||||| ||||||||| || |||| |  ||||  ||||  ||||||| | |||||| |||| || |||| ||||||||||||  ||    
T  48157205 tgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttctat 48157106  T
Q  329 aagctctctcaaacagtctcac 350  Q
    |||||||| |||||||||||||    
T  48157105 aagctctcccaaacagtctcac 48157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 350
Target Start/End: Complemental strand, 25670673 - 25670550
Alignment:
Q  227 agtgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttc 326  Q
    |||||||  ||||||||||| ||||||||| ||||  |||| | ||||  || | |||||||| | ||||||| |||    |||||||||||||||||||    
T  25670673 agtgttttcatataagctatcaattgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttc 25670574  T
Q  327 ataagctctctcaaacagtctcac 350  Q
    ||||| | ||||||||||||||||    
T  25670573 ataagttttctcaaacagtctcac 25670550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 33894666 - 33894733
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| | ||||||||||| || ||||||||| | ||||||||||||||||| |||||||||||||    
T  33894666 aaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcac 33894733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 30496743 - 30496801
Alignment:
Q  282 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaa 340  Q
    |||||||| | |||||||||||||| |||| |||||| |||||||||||||||||||||    
T  30496743 aaaataagctgaaaacaacttacgggcatgccataagctgttttcataagctctctcaa 30496801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 38010706 - 38010820
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  ||||||||||| ||||||||||||| ||||  ||||||| | |||||| |||| |  ||||| ||  |||||||||||||   ||    
T  38010706 atataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttttcataaaaact 38010805  T
Q  336 ctcaaacagtctcac 350  Q
    |||||||| ||||||    
T  38010806 ctcaaacattctcac 38010820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 350
Target Start/End: Complemental strand, 44151565 - 44151440
Alignment:
Q  229 tgtttcaatataagctataaattgttttcataaactatcctagagaag-ttataaaaataagtttaaaacaacttacggtcatgtcat----aagttgtt 323  Q
    |||||| ||||||||||||| ||||||||||||||||| || || ||| ||||  ||||||| | |||||| |||| || ||||||||    || |||||    
T  44151565 tgtttccatataagctataagttgttttcataaactat-cttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataaaaaaattgtt 44151467  T
Q  324 ttcataagctctctcaaacagtctcac 350  Q
    |||||||||||||||||| | ||||||    
T  44151466 ttcataagctctctcaaataatctcac 44151440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 350
Target Start/End: Complemental strand, 33646035 - 33645924
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct- 337  Q
    ||||||||||| ||||||||||| ||||| | ||||  ||||  ||||||  | |||||||||||  | ||||||||||||||||| ||||||||||||     
T  33646035 taagctataaactgttttcataagctatc-tggagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctctc 33645937  T
Q  338 caaacagtctcac 350  Q
    ||| |||||||||    
T  33645936 caaccagtctcac 33645924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 350
Target Start/End: Original strand, 12242251 - 12242350
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||| ||||| |||||| || ||  |||| ||||||| | |||||||||||  | ||| |||||||  |||| |||||||||||||||||||||||||    
T  12242251 tgttttaataaattatcctggacaacgtatagaaataagctgaaaacaacttataggcatatcataagccgtttgcataagctctctcaaacagtctcac 12242350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 27626154 - 27626087
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||  ||| || ||||||||||| ||||| |||||||| ||||||||| ||||||    
T  27626154 aaataagtttaaaacagtttatggacatgtcataagctgtttccataagctttctcaaacaatctcac 27626087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 28727800 - 28727729
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    ||||| ||||||| | |||||||| ||||  |||||||||||  |||| |||||||||||||||||||||||    
T  28727800 ttatagaaataagctgaaaacaacatacgaacatgtcataagccgtttccataagctctctcaaacagtctc 28727729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 3610817 - 3610723
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    |||||||||||| |||||||| ||||||||||||||||  ||||| ||||||| | ||||   |||| || |||||||| || ||||| ||||||    
T  3610817 tataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaaaggcttatggacatgtcattagctgtttccataag 3610723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 22387902 - 22387860
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  22387902 catgccataagttgttttcataagctctcccaaacagtctcac 22387860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 331
Target Start/End: Original strand, 34035919 - 34036005
Alignment:
Q  246 taaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataag 331  Q
    |||||||||||||||| ||||| ||||||| ||   |||||||||| ||||||||||| |  | |||||||||||| ||||||||||    
T  34035919 taaattgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataag 34036005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 36537957 - 36538014
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| |  ||||||||||||||||| |||||| ||||||||||| ||||||    
T  36537957 aaaacaacttatgaacatgtcataagttgtttccataagttctctcaaacaatctcac 36538014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 39907796 - 39907857
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaaca 298  Q
    ||||||||||||| ||||||||||||||||| ||||||| | || |||||||| | ||||||    
T  39907796 tataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaaca 39907857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 44615179 - 44615082
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||||||| |||||||||||  || ||| ||||  ||||  ||||||  | |||||| |||  || |||||||||||||||||||||||||||||    
T  44615179 taagctataaactgttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctc 44615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 47427364 - 47427275
Alignment:
Q  253 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 342  Q
    |||||||||||||| || ||||  ||| ||||||||| || ||| | ||||  |  |||||||||||||||| |||||||||||||||||    
T  47427364 ttttcataaactattcttgagagtttaaaaaaataagcttgaaatagcttatagagatgtcataagttgtttccataagctctctcaaac 47427275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 3468623 - 3468719
Alignment:
Q  253 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||| ||||||||||||| || |  |||||||||  |||||||||| || |||||||| |||||||| ||  | |||||  |||||||||||    
T  3468623 ttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacatgtcattagttgtttccaacaactctccgaaacagtctca 3468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 5276240 - 5276332
Alignment:
Q  253 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 345  Q
    ||||||||| ||||||| || || | || |||||||| | ||||||||| | |   |||||||||| ||||| ||||||||||||||||||||    
T  5276240 ttttcataagctatcctggaaaactaatgaaaataaggtgaaaacaactaatgaagatgtcataagatgtttgcataagctctctcaaacagt 5276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 23214920 - 23214960
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  23214920 atgtcataagttgttttcataaattctctcaaacagtctca 23214960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 350
Target Start/End: Complemental strand, 28691911 - 28691800
Alignment:
Q  238 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 337  Q
    ||||| |||| ||||||||||||| ||||||| ||||  |||| |||||||  | | ||||| ||| || || |||||||| |||||||||||| ||||     
T  28691911 ataagttatacattgttttcataagctatcctggagatcttatgaaaataaactgataacaatttatggacaagtcataagctgttttcataagatctc- 28691813  T
Q  338 caaacagtctcac 350  Q
    | |||||||||||    
T  28691812 cgaacagtctcac 28691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 39360062 - 39360130
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 351  Q
    ||||||| | ||| ||||||| ||  |||||||||||||||| ||||| |||| |||||||||||||||    
T  39360062 aaataagctgaaagcaacttatggatatgtcataagttgtttccataaactctatcaaacagtctcacg 39360130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 6857369 - 6857310
Alignment:
Q  284 aataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    |||||||| ||||||||||| || |||| |||||| ||||| ||||||||||||| ||||    
T  6857369 aataagttgaaaacaacttatggacatggcataagctgtttccataagctctctcgaaca 6857310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 30535556 - 30535667
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||| ||||||  ||||| ||||| ||||| || ||||  ||| |||||||  | |||||| ||||||  ||| |||||||||||||||||||| ||||    
T  30535556 tataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctc 30535655  T
Q  337 tcaaacagtctc 348  Q
      ||||||||||    
T  30535656 caaaacagtctc 30535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 36598387 - 36598320
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| | |||||| |||| |  ||||||||||| ||||| |||||||||||||||||| ||||||    
T  36598387 aaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcac 36598320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 39542377 - 39542266
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    |||||| ||||| |||||| |||||  |||||| ||||  |||| |||||||||||   | |||| || | ||||||||||||| ||| |||||||||||    
T  39542377 tataagatataagttgtttccataagttatcctggagagcttatgaaaataagtttgttaaaactgacagacatgtcataagttatttccataagctctc 39542278  T
Q  337 tcaaacagtctc 348  Q
    | |||| |||||    
T  39542277 taaaactgtctc 39542266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 267
Target Start/End: Complemental strand, 39711484 - 39711453
Alignment:
Q  236 atataagctataaattgttttcataaactatc 267  Q
    ||||||||||||||||||||||||||||||||    
T  39711484 atataagctataaattgttttcataaactatc 39711453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 9038109 - 9038198
Alignment:
Q  241 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    ||||||||| ||||||||||||||||| | ||||| || | |||||||| | ||||||| ||| |  ||||||||||| |||||| |||||    
T  9038109 agctataaactgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtcataagctgtttttataag 9038198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 15740448 - 15740394
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    |||| |||||||||| |||||| |||| |  ||||||||||||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 15740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 21453286 - 21453324
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagaga 274  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  21453286 atataagctataaactgttttcataagctatcctagaga 21453324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 24363671 - 24363601
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtca 314  Q
    ||||| |||||||||||| ||||||| |||| |||||  ||||||| | ||||||||||| || |||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 28340426 - 28340385
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  28340426 catgtcataagttgttttcataagctctc-ccaacagtctcac 28340385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 44808191 - 44808261
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 347  Q
    |||| |||||||| | ||||||  ||| || ||||||||||||| |||||||||| ||| |||||||||||    
T  44808191 ttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataaggtctatcaaacagtct 44808261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 44821952 - 44822018
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 303  Q
    |||||| |||||  ||||||||||| |||| || ||||| |||| |||||||||| |||||||||||    
T  44821952 tataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaactta 44822018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 47046172 - 47046134
Alignment:
Q  250 ttgttttcataaactatcctagagaagttataaaaataa 288  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  47046172 ttgttttcataagctatcctagagaaattataaaaataa 47046134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 4970792 - 4970755
Alignment:
Q  313 cataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcac 4970755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 17983769 - 17983838
Alignment:
Q  269 tagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    ||||||| ||||  |||||||||||||||||||||||| ||| |||||| | |||| ||| | |||||||    
T  17983769 tagagaacttattgaaataagtttaaaacaacttacggacatatcataaatcgtttccatcaactctctc 17983838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 20881710 - 20881661
Alignment:
Q  240 aagctataaattgttttcataaactatcctagagaagttataaaaataag 289  Q
    ||||||||| |||||||||||||||||| || |||| |||| ||||||||    
T  20881710 aagctataagttgttttcataaactatcttaaagaacttatgaaaataag 20881661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 25422390 - 25422431
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||    
T  25422390 catgtcataaggtgtttccataagctctcccaaacagtctca 25422431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 28844539 - 28844596
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| | || |||||||||||||||||||| ||||||||  ||||||| ||||    
T  28844539 aaaacaactgatggacatgtcataagttgttttcagaagctctcctaaacagtatcac 28844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 31003004 - 31003045
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    |||||||||||||||||| |||| || |||||||||||||||    
T  31003004 catgtcataagttgtttttataaactttctcaaacagtctca 31003045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 420427 - 420467
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||| ||||||||||||| |||| |||||||||||||    
T  420427 tgtcataaattgttttcataagttctcccaaacagtctcac 420467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 3804405 - 3804437
Alignment:
Q  314 ataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||||||| |||||||||||||||    
T  3804405 ataagttgttttcataaactctctcaaacagtc 3804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 7244687 - 7244779
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||||||||| ||||  | ||||  |||| |||||||| | ||||||||||| |  |||||||||| |||||| ||| |||||| |||||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccatcagctctttcaaaca 7244779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 28165076 - 28165196
Alignment:
Q  229 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 328  Q
    ||||| ||||||||||||||| ||| || |||| ||||| | ||||  ||||  ||||||||| |||||| |||| |  || ||| | || ||||| |||    
T  28165076 tgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaacagcttatgaacaggtcttgagctgtttccat 28165175  T
Q  329 aagctctctcaaacagtctca 349  Q
    ||||| ||||||| |||||||    
T  28165176 aagctatctcaaagagtctca 28165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 31149705 - 31149737
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaa 341  Q
    |||||||||||| ||||||||||||||||||||    
T  31149705 atgtcataagttattttcataagctctctcaaa 31149737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 31167997 - 31168029
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaa 341  Q
    |||||||||||| ||||||||||||||||||||    
T  31167997 atgtcataagttattttcataagctctctcaaa 31168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 336
Target Start/End: Original strand, 39967917 - 39968013
Alignment:
Q  241 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataagctctc 336  Q
    |||||||| |||||||||||| |||||  |||||| | || |||||||||| |||||| |||| |  | ||| |||||| |||||||||||| ||||    
T  39967917 agctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 30389091 - 30389206
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||   ||||||||||| || |||||||||| |||| |||||||| | ||||||||||| |  |||||||| || | |||||||| |||||    
T  30389091 atataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcattagctattttcatatgctct 30389190  T
Q  336 ctcaaacagtctcacg 351  Q
    |||||||||| |||||    
T  30389191 ctcaaacagtgtcacg 30389206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 39551283 - 39551173
Alignment:
Q  240 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 339  Q
    ||||||||| |||||||||||| || |||| ||||  ||||||||||||||| |||||| |||  || ||||||||||||||||| |||||  |||| ||    
T  39551283 aagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctccca 39551184  T
Q  340 aacagtctcac 350  Q
    |||||| ||||    
T  39551183 aacagtttcac 39551173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 8629489 - 8629562
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| | ||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||    
T  8629489 ttataaatagaagttgaaaacaacttatgatcatgtcataagttgttttcataagttctctcaaacggtctcac 8629562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 350
Target Start/End: Original strand, 14949875 - 14949972
Alignment:
Q  253 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||| |||  ||||| ||||||| | |||||| |||| || ||||||||||||| |||||||||||||||  ||||||||||||    
T  14949875 ttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcac 14949972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 350
Target Start/End: Complemental strand, 11569520 - 11569421
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| ||||| | ||||  || | |||||||| | ||||||||||| |  ||||||||||| ||||| |||||||||||| ||||||||||||    
T  11569520 tgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcac 11569421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 350
Target Start/End: Original strand, 2091746 - 2091869
Alignment:
Q  229 tgtttcaatataagctataaattgttttcataaactatcctagagaagt---tataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt 325  Q
    ||||| ||||||||||| || |||||||||||| ||||||| | ||||    |||| ||||||||| ||||||||||| ||  || ||||||||||||||    
T  2091746 tgttttaatataagctacaagttgttttcataagctatcct-gtgaagagcatatagaaataagttgaaaacaacttatggatatatcataagttgtttt 2091844  T
Q  326 cataagctctctcaaacagtctcac 350  Q
      | |||||||||||||| ||||||    
T  2091845 tgtgagctctctcaaacaatctcac 2091869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 26473816 - 26473730
Alignment:
Q  250 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    |||||||||||| ||||||||||||  |||| |||||||||| |||  | ||||  | ||||||||||| |||||||||||||||||    
T  26473816 ttgttttcataagctatcctagagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgttttcataagctctc 26473730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 348
Target Start/End: Complemental strand, 779132 - 779027
Alignment:
Q  243 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 342  Q
    ||||||| ||||||||||||||||| | ||||   ||  |||||||| | ||||||||||| |  ||||||||||||||||||| |||| ||| ||||||    
T  779132 ctataaactgttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcataagttgttttcgtaagttctttcaaac 779033  T
Q  343 agtctc 348  Q
    | ||||    
T  779032 aatctc 779027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 30918177 - 30918218
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  30918177 atgtcacaagttgttttcataagctctctcaaacagtctcac 30918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 7918510 - 7918412
Alignment:
Q  250 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    |||||||| ||| ||||| | ||||  ||||  |||||||||  ||||| |||| |  |||||| |||||||||||||||||||||| |||||||||||    
T  7918510 ttgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacagtctc 7918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 9541057 - 9540967
Alignment:
Q  253 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||||||| ||||||||||||  || | |||||||| | || |||| ||| || ||||||||||| ||||| ||||||||||| ||||||    
T  9541057 ttttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataagatgtttccataagctctcccaaaca 9540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 11771048 - 11770978
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||||||||||||| |||||||| ||  | ||| |||||||||||||||||||| ||| | |||||||||    
T  11771048 ttataaaaataagttgaaaacaacgtatagacatatcataagttgttttcataagttcttttaaacagtct 11770978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 30987997 - 30987955
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  30987997 catgtcataagttgtttccataagctctctcaaacagactcac 30987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 40071741 - 40071855
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||| |||||||| |||||||| || |||||||||| |  |||| ||||| |||| ||| |   ||| |  ||||||||||||||||| ||||||||||    
T  40071741 atatatgctataaactgttttcagaagctatcctagaaagcttatgaaaattagttgaaagctgattatgaacatgtcataagttgtttccataagctct 40071840  T
Q  336 ctcaaacagtctcac 350  Q
    | |||||| ||||||    
T  40071841 cccaaacactctcac 40071855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 9700034 - 9700107
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||| |||||||| | |||||| |||| || |||||||||| ||| ||||| ||||||||||||| ||||||||    
T  9700034 ttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcac 9700107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 31875632 - 31875559
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||| |||||||||| ||||   |||| || ||||||||||||||||| |||||||| ||||||||||| ||||    
T  31875632 ttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagctttctcaaacagtgtcac 31875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 6509381 - 6509273
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  ||||||||||| ||||||| ||||  ||||  ||||||| | |||| |  |||  | ||||||||||| |||||  |||||||||    
T  6509381 atataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttctataagctct 6509282  T
Q  336 ctcaaacag 344  Q
    |||||||||    
T  6509281 ctcaaacag 6509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 350
Target Start/End: Complemental strand, 7918781 - 7918745
Alignment:
Q  314 ataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7918781 ataagttgttttcataagctctcccaaacagtctcac 7918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 9572919 - 9572975
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||| || ||||||||||||| ||||| |||| |||| ||||||||||||    
T  9572919 aaaacaacttatggacatgtcataagttattttcgtaagttctcacaaacagtctca 9572975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 12851171 - 12851279
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    ||||||| ||||||||||||||| || |||| ||||  |||| ||||||||   |||||| |||| |  ||||| ||||| |||||||||||| | || |    
T  12851171 taagctagaaattgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttccc 12851270  T
Q  339 aaacagtct 347  Q
    |||||||||    
T  12851271 aaacagtct 12851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 6950361 - 6950428
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| | |||||||||||  | ||||||||| ||||||| ||||||||||| |||||| ||||||    
T  6950361 aaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcac 6950428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 30191147 - 30191108
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  30191147 catgtcataagttgtttccataagctctcccaaacagtct 30191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 348
Target Start/End: Complemental strand, 32840990 - 32840951
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  32840990 atgtcataagttgttttcataagttctcccaaacagtctc 32840951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 2488014 - 2487972
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  2488014 catgttataagttgttttcataagttctcccaaacagtctcac 2487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 4251020 - 4251062
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||  |||||||||| |||||||||||||||||||    
T  4251020 catgtcataagcagttttcataaactctctcaaacagtctcac 4251062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 8060676 - 8060770
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 345  Q
    ||||||||||| | ||||||||||  ||||  ||||||| | |||| |||||| |  | |  ||||| |||||||||||||||||||||||||||    
T  8060676 tgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaactttccataatttgttttcataagctctctcaaacagt 8060770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 347
Target Start/End: Original strand, 31862486 - 31862595
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||||||||  |||||||||||  |||||||||||  |||| |||||||| | |||||| |||| |   | ||||||||||| || | ||| |||||    
T  31862486 tataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagttgcttccgtaa-ctctc 31862584  T
Q  337 tcaaacagtct 347  Q
    |||||||||||    
T  31862585 tcaaacagtct 31862595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 41442459 - 41442417
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  41442459 catgtcataaattgttttcataagttctgtcaaacagtctcac 41442417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 10120822 - 10120859
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtc 346  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  10120822 atgtcataagctgttttcataagttctctcaaacagtc 10120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 11056667 - 11056630
Alignment:
Q  313 cataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  11056667 cataagttgttttcataaactctctcaaacaatctcac 11056630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 26371014 - 26371067
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||| |||  |||||||||||| |||| |||||| ||||||||||||||    
T  26371014 aaaacaactgacgcacatgtcataagtagtttccataagatctctcaaacagtc 26371067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 341
Target Start/End: Complemental strand, 27412884 - 27412855
Alignment:
Q  312 tcataagttgttttcataagctctctcaaa 341  Q
    ||||||||||||||||||||||||||||||    
T  27412884 tcataagttgttttcataagctctctcaaa 27412855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 35220791 - 35220702
Alignment:
Q  246 taaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||| ||||||||||| |||| || ||||  ||||||||||||| | |||| | |||| || ||||||||||  ||||||||||| ||||    
T  35220791 taaactgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgggcatgtcataaactgttttcataaactct 35220702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 5069761 - 5069805
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcacgt 352  Q
    ||||| ||||| ||||| |||||||||||||||||||||| ||||    
T  5069761 catgttataagatgtttccataagctctctcaaacagtcttacgt 5069805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 350
Target Start/End: Original strand, 21130609 - 21130718
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    |||| ||||| ||||| |||||||||||| | ||||  ||||  ||||||| | |||||| | |  || ||||||| ||| | ||| |||||||||||||    
T  21130609 taagatataagttgttctcataaactatcattgagagcttatggaaataagctcaaaacagcat--ggacatgtcaaaagctatttccataagctctctc 21130706  T
Q  339 aaacagtctcac 350  Q
    ||||||||||||    
T  21130707 aaacagtctcac 21130718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 26771332 - 26771372
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  26771332 tgtcataagctgttttcataagttctcccaaacagtctcac 26771372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 31915297 - 31915257
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  31915297 tgtcataagttgtttgtataagctttctcaaacagtctcac 31915257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 35534616 - 35534576
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||| ||| ||||||||||||||||||    
T  35534616 tgtcataagctgttttcacaagttctctcaaacagtctcac 35534576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 336
Target Start/End: Original strand, 45071438 - 45071466
Alignment:
Q  308 catgtcataagttgttttcataagctctc 336  Q
    |||||||||||||||||||||||||||||    
T  45071438 catgtcataagttgttttcataagctctc 45071466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 2460182 - 2460115
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||    
T  2460182 aaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcac 2460115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 352
Target Start/End: Original strand, 4006706 - 4006822
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||| |||||||||||| ||||||  |||| ||||| |||||||| | |||| |||||| || ||| || ||||||||||||| |||||||    
T  4006706 atataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacatatcgtaagttgttttcacaagctct 4006805  T
Q  336 ctcaaacagtctcacgt 352  Q
      |||| ||| ||||||    
T  4006806 tccaaagagtttcacgt 4006822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 281926 - 281812
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  ||| ||||||| ||||||||||||  | ||  ||||||| | |||||||||||  | |||||||||||||| || ||| ||||||    
T  281926 atataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagctct 281827  T
Q  336 ctcaaacagtctcac 350  Q
    | |||||||||||||    
T  281826 cccaaacagtctcac 281812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 34939526 - 34939612
Alignment:
Q  257 cataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||| |||||||  ||| |||||  ||||||| | |||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  34939526 cataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaaca 34939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 8035226 - 8035114
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||| || ||||||||||||  ||||||||| |  |||  |||||||||| ||||||| ||| |  ||||||||||||||||||| |||| |||    
T  8035226 atataagctagaagttgttttcataagttatcctagaaagcttacgaaaataagttgaaaacaagttatgaccatgtcataagttgttttcttaagttct 8035127  T
Q  336 ctcaaacagtctc 348  Q
    | |||| ||||||    
T  8035126 cccaaatagtctc 8035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 8348275 - 8348327
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 345  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  8348275 aaaacaacttatggtcatgttataagttgttttcgtaagctctctcaaacagt 8348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 10616578 - 10616514
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 341  Q
    ||||||||||||| | || ||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  10616578 ttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaa 10616514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 33500501 - 33500443
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 351  Q
    ||||||||||| |  |||||||||| |||||||||||||||| ||||||||||||||||    
T  33500501 aaaacaacttatgcacatgtcataaattgttttcataagctccctcaaacagtctcacg 33500443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 30523652 - 30523751
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||| || ||||||||| ||||||| |||| |||||| |||| |||| |||||| |||| |  |||| |||||||||||| |||||| |||    
T  30523652 atataagctataagtt-ttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccataagatct 30523750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 31624085 - 31624177
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    ||||||||||  ||||||||||  ||||| | ||||| |||| |||||||||| |||||| |||| |  ||||||||||| ||||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataag 31624177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 32578017 - 32577957
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||||| | |||||| || | || ||||||||||||||||||||||||||||||||||||    
T  32578017 aaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaaca 32577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 9027611 - 9027678
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 344  Q
    |||| |||||||| | ||||||||||| || ||||||||||||| ||| |||||||||| ||||||||    
T  9027611 ttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagctctttcaaacag 9027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 347
Target Start/End: Complemental strand, 20368250 - 20368147
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||| |||||||||||| || || | ||||| |||| |||||||||| |||  | |||| |  |||||||||||||||||||||||| |||| |||| |    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaaata 20368151  T
Q  344 gtct 347  Q
    ||||    
T  20368150 gtct 20368147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 349
Target Start/End: Complemental strand, 10476196 - 10476087
Alignment:
Q  239 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    |||||| ||| |||||||||||| ||||| | |||| | |||| ||||||| | ||||||| |||||  |||||||| || ||||| |||||||||||      
T  10476196 taagctgtaagttgttttcataagctatcttggaga-gctatagaaataagctgaaaacaatttacgagcatgtcattagatgtttccataagctctcat 10476098  T
Q  339 aaacagtctca 349  Q
    |||||||||||    
T  10476097 aaacagtctca 10476087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 32171387 - 32171349
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  32171387 tgtcataagctgttttcataagctctctcaaacagtctc 32171349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 32917261 - 32917303
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  32917261 catgtcataagttgtttccataagctctcccaaacagtctcac 32917303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 4246402 - 4246507
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||| ||||||  ||||||||||| ||||  | ||||   |||||||||||||| |||||| |||| || |||||||| |||||||| || ||||||     
T  4246402 atataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatgagttgtttccaaaagctca 4246501  T
Q  336 ctcaaa 341  Q
    ||||||    
T  4246502 ctcaaa 4246507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 7931790 - 7931705
Alignment:
Q  250 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||| || |||||||| |||  |||   ||||||| | ||||||||||| |  ||||||||||||||||||||||||||||    
T  7931790 ttgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagctct 7931705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 27857423 - 27857464
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  27857423 atgtcataagttgttttcataagctctcccaaacagtttcac 27857464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 725667 - 725631
Alignment:
Q  302 tacggtcatgtcataagttgttttcataagctctctc 338  Q
    ||||| |||||||||||||||||||||||||||||||    
T  725667 tacggacatgtcataagttgttttcataagctctctc 725631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 324
Target Start/End: Original strand, 2112192 - 2112280
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 324  Q
    |||||| |||||| |||||||||||||||||| |||||   ||||| ||||||    ||||||||||| |  |||||||||||||||||    
T  2112192 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 2112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 33832318 - 33832238
Alignment:
Q  269 tagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    |||||||  ||| |||||||| | |||||||||||    |||||||||||||||||||||||| ||||| |||||| ||||    
T  33832318 tagagaatatatgaaaataagctaaaaacaacttataaacatgtcataagttgttttcataagttctcttaaacagactca 33832238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 7485137 - 7485102
Alignment:
Q  314 ataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7485137 ataagttgttttcataagctctctcaaacagcctca 7485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 10031771 - 10031838
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| | ||||||||||| ||  ||||| ||||||| ||||||| ||||| ||||||||||||||    
T  10031771 aaataagatgaaaacaacttatggatatgtcgtaagttggtttcataggctctttcaaacagtctcac 10031838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 336
Target Start/End: Complemental strand, 20377941 - 20377898
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    |||||||||||  | |||||||||||||||||||||||||||||    
T  20377941 aaaacaacttatagacatgtcataagttgttttcataagctctc 20377898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 1575928 - 1575982
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    |||| |||||||||| |||||| |||| |  ||||||||||||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 1575982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 2727934 - 2727896
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagaga 274  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  2727934 atataagctataagttgttttcataagctatcctagaga 2727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 341
Target Start/End: Original strand, 4080955 - 4081013
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 341  Q
    ||||||||| ||||||||||| |  |||| ||||||||||||||||||  |||||||||    
T  4080955 aaataagttgaaaacaacttatgaacatggcataagttgttttcataaaatctctcaaa 4081013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 4324516 - 4324423
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 345  Q
    ||||||||||| ||||||| || || ||||  ||||||| | ||| ||  ||| || |||||||||||||||||| ||||| |||||||||||||    
T  4324516 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcataagttgtttt-ataagttctctcaaacagt 4324423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 341
Target Start/End: Complemental strand, 5566208 - 5566150
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 341  Q
    ||||||||| ||||||||||| || ||||| ||||| ||||||||| ||||||| ||||    
T  5566208 aaataagttgaaaacaacttatggacatgtaataagctgttttcattagctctcacaaa 5566150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 30863295 - 30863337
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||| |  ||||||||||||||||||||||||||||    
T  30863295 aaaacaacttatgtacatgtcataagttgttttcataagctct 30863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 33116648 - 33116690
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||||||||||||||  || |||||||||||||||    
T  33116648 catgtcataagttgttttcataaattccctcaaacagtctcac 33116690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 781371 - 781472
Alignment:
Q  235 aatataagctataaattgttttcataaactatccta-gagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 333  Q
    ||||||||||||||  | |||||||||| |||| || ||||  ||||| ||||| | | ||||||  | |||| |||||||||| |||||||||||||||    
T  781371 aatataagctataagcttttttcataaattatcttaagagagcttatagaaatatgctgaaaacagttgacggacatgtcataatttgttttcataagct 781470  T
Q  334 ct 335  Q
    ||    
T  781471 ct 781472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 2263256 - 2263293
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagt 345  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  2263256 catgtcatatgttgttttcataagttctctcaaacagt 2263293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 3528811 - 3528884
Alignment:
Q  252 gttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt 325  Q
    |||||||| ||||||| | ||||  |||| |||||||| | ||||||| ||| || ||||||||||||||||||    
T  3528811 gttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttgtttt 3528884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 5731618 - 5731675
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||||| ||| ||||||| | ||||||||||||||  |||||| ||||||    
T  5731618 aaaacaacttacggacatatcataagctattttcataagctctaccaaacactctcac 5731675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 20671942 - 20671905
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagaga 274  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  20671942 tataagctttaaattgttttcataaactatcatagaga 20671905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 31338040 - 31338073
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaa 341  Q
    ||||||||||||||||||||||||||||| ||||    
T  31338040 catgtcataagttgttttcataagctctcacaaa 31338073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 342
Target Start/End: Complemental strand, 31594405 - 31594356
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 342  Q
    ||||||| ||| || ||||||||||||||||| ||||| |||||||||||    
T  31594405 aaaacaaattaaggacatgtcataagttgtttccataacctctctcaaac 31594356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 31671152 - 31671087
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaact 301  Q
    |||||||||||||  ||||||| |||||||||||||| |  |||| |||||||| | |||||||||    
T  31671152 atataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaacaact 31671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 33498683 - 33498724
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||||||||||||||  |||| |||||||    
T  33498683 catgtcataagttgttttcataagctctaccaaaaagtctca 33498724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 336
Target Start/End: Complemental strand, 1669804 - 1669776
Alignment:
Q  308 catgtcataagttgttttcataagctctc 336  Q
    |||||||||||||||||||||||||||||    
T  1669804 catgtcataagttgttttcataagctctc 1669776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 2027804 - 2027764
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    |||||||||||||||||  |||||||||| |||||||||||    
T  2027804 catgtcataagttgtttctataagctctcccaaacagtctc 2027764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 350
Target Start/End: Original strand, 2455683 - 2455719
Alignment:
Q  314 ataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  2455683 ataagttgtttccataagctctttcaaacagtctcac 2455719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 336
Target Start/End: Complemental strand, 6310256 - 6310228
Alignment:
Q  308 catgtcataagttgttttcataagctctc 336  Q
    |||||||||||||||||||||||||||||    
T  6310256 catgtcataagttgttttcataagctctc 6310228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 9559543 - 9559503
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  9559543 atgtcataagttgttttcataagttctcccaaatagtctca 9559503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 30604935 - 30604995
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||||||| |||| |||||| |  ||| ||||| |||||||| |||||||||||||||||    
T  30604935 aaataagttgaaaagaacttatgaacatttcataggttgttttaataagctctctcaaaca 30604995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 349
Target Start/End: Complemental strand, 7218199 - 7218039
Alignment:
Q  190 ataagctatttccataatgaaatataaaaataaagtcag--tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaata 287  Q
    |||| ||||||||||||| |||  ||||| ||||||||   |||||  ||||||||||||| |||||||||||| ||||||| ||||| |||| ||||||    
T  7218199 ataatctatttccataataaaaggtaaaa-taaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaata 7218101  T
Q  288 agtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    |||| |||||| |||  |  | |||||||||| ||||||| |||||| | |||||| |||||    
T  7218100 agttgaaaacagcttgtgaacgtgtcataagtcgttttcacaagctcccccaaacaatctca 7218039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 25005875 - 25005765
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggt--catgtcataagttgttttcataagct 333  Q
    ||||||||||||| |||||||||||| ||||||| ||||  ||||||||| ||| |||||| | |||||  |   | |||||||||||||||||||||||    
T  25005875 atataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatcttactatagaaagtcataagttgttttcataagct 25005776  T
Q  334 ctctcaaacag 344  Q
    ||| |||||||    
T  25005775 ctcccaaacag 25005765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 38867909 - 38867799
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||| |||| |||||||||||  |||| |  |||| |||| |||||||| | ||||||||| | || ||| ||||||||| ||| ||||||||||    
T  38867909 atataagctttaaactgttttcataagttatcttgaagaacttatgaaaataagctaaaaacaactgatggacatatcataagttatttccataagctct 38867810  T
Q  336 ctcaaacagtc 346  Q
    |||||||||||    
T  38867809 ctcaaacagtc 38867799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 25479573 - 25479686
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||| ||||||| |||||||||||| ||||||||||||  |||| |||||||| | ||||||||| | |  ||||||||||  | |||||||||||||     
T  25479573 atataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataagctca 25479672  T
Q  336 ctcaaacagtctca 349  Q
    | |||| |||||||    
T  25479673 cacaaatagtctca 25479686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 4868439 - 4868505
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||  | |||||||||||||| |||||||| |||||||||||||||||||    
T  4868439 aaataagttgaaaacaacttattgacatgtcataagttg-tttcataaactctctcaaacagtctcac 4868505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 335
Target Start/End: Original strand, 17420195 - 17420294
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||| ||||||| ||| |||||  ||| || | ||  ||||||||| ||||||| ||| || ||||| ||||||||||||||||||||||    
T  17420195 atataagctataaactgttttcgtaagctatctcagaaaactaatggaaataagttgaaaacaatttatggacatgtaataagttgttttcataagctct 17420294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 27887201 - 27887114
Alignment:
Q  231 tttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataag 318  Q
    |||| ||||||||||||| |||||||||||||||||| | ||||   |||||||||||| | ||||||| ||| || |||||||||||    
T  27887201 tttccatataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtcataag 27887114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 11639486 - 11639395
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||| ||||| |||||  ||| |||||||  |||| |||||||| | |||||| |||| || ||||||||||| ||||||||||||||||    
T  11639486 tataaactgtttgcataagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcataagctct 11639395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 350
Target Start/End: Complemental strand, 32515500 - 32515405
Alignment:
Q  255 ttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| ||||| | ||||  ||||| | ||||||| |||||||||||  | ||||||||| | ||||| ||||||||||| |||||||||||||    
T  32515500 ttcataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcac 32515405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 3224415 - 3224529
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||   |||||| |||| |||| |||||||| |||| |||||||| | | ||||||||| || |||||||||||| ||||  ||||  |||    
T  3224415 atataagctatagggtgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacatgtcataagtagtttgtataaattct 3224514  T
Q  336 ctcaaacagtctcac 350  Q
    |||||| ||| ||||    
T  3224515 ctcaaatagtgtcac 3224529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 4548759 - 4548821
Alignment:
Q  282 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 344  Q
    |||||||| | |||||||||||| | ||||||||||||||||| ||| || ||||||||||||    
T  4548759 aaaataagctaaaaacaacttacaggcatgtcataagttgtttccattaggtctctcaaacag 4548821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 331
Target Start/End: Complemental strand, 4699676 - 4699598
Alignment:
Q  253 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    ||||||||||||||||  ||||  ||||| ||||||| | |||||| |||| |  ||||||||||||||||||||||||    
T  4699676 ttttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttttcataag 4699598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 341
Target Start/End: Original strand, 6262777 - 6262835
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 341  Q
    ||||||| ||||||||||||| || ||| ||||||||| ||||||||||||||| ||||    
T  6262777 aaataagcttaaaacaacttatggacatatcataagttattttcataagctctcccaaa 6262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 29045990 - 29045896
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataa 330  Q
    ||||||||||||| |||||||||||| || |||| ||||  | ||  || || ||| ||| ||||||| || |||||||||||||||||||||||    
T  29045990 atataagctataagttgttttcataagctgtcctggagagatgatggaagtacgttaaaagcaacttatggacatgtcataagttgttttcataa 29045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 31517818 - 31517704
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  ||| ||||||| || || | ||||  |||| |||||||| | |||||| |||| |  |||||||| ||||||||| ||||| |||    
T  31517818 atataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttct 31517719  T
Q  336 ctcaaacagtctcac 350  Q
    | |||||||||||||    
T  31517718 cccaaacagtctcac 31517704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 35351036 - 35351098
Alignment:
Q  241 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 303  Q
    |||||||| |||| ||||||||||||||||||||  ||| ||||||||| | |||||||||||    
T  35351036 agctataagttgtcttcataaactatcctagagagcttacaaaaataagctgaaaacaactta 35351098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 5591970 - 5591933
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  5591970 tgtcataagctgttttcataagctctctcaaacagtct 5591933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 350
Target Start/End: Original strand, 30257668 - 30257789
Alignment:
Q  229 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 328  Q
    |||||| ||||||||| ||| |||||||||||||||||||| |||   ||||| ||||||| | |||||| |||| |  ||||||||||    |||| ||    
T  30257668 tgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataaaagatttttat 30257767  T
Q  329 aagctctctcaaacagtctcac 350  Q
    ||||||||  ||| ||||||||    
T  30257768 aagctctcctaaatagtctcac 30257789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 33186027 - 33185927
Alignment:
Q  244 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||| ||||||| |||| ||||||||||||  | ||  ||||||||| ||||||  ||| ||  ||||||||| |||||||||||| ||||||||||||    
T  33186027 tataagttgtttttataagctatcctagagatat-atgtaaataagttgaaaacaggttatggaaatgtcataatttgttttcataaactctctcaaaca 33185929  T
Q  344 gt 345  Q
    ||    
T  33185928 gt 33185927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 37842431 - 37842338
Alignment:
Q  238 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    ||||||||||| |||||||||||| ||||| |  |||| ||||||||||||| | |||||  |||| |  |||||||| || ||||||||||||    
T  37842431 ataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttttcataag 37842338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 38170711 - 38170654
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| |  ||||||||||| ||||||||||||||||| ||| |||||||||    
T  38170711 aaaacaacttatgaacatgtcataagctgttttcataagctctcccaagcagtctcac 38170654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 42336664 - 42336717
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||  || |||||||||||||||||||||||| | ||||||||||||    
T  42336664 aaaacaacttttggacatgtcataagttgttttcataagttatctcaaacagtc 42336717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 1432508 - 1432560
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 289  Q
    ||||||||||||||||||||||||||||||| | ||||| |||| ||| ||||    
T  1432508 tataagctataaattgttttcataaactatcttggagaacttatgaaagtaag 1432560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 4700143 - 4700079
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaact 301  Q
    ||||||||||||| |||||| |||||||||||| ||||  |||| |||||||| | |||||||||    
T  4700143 tataagctataaactgtttttataaactatcctggagagcttatgaaaataagctgaaaacaact 4700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 8780430 - 8780394
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacag 344  Q
    |||||||||||||||||| ||||||||||||||||||    
T  8780430 catgtcataagttgtttttataagctctctcaaacag 8780394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 350
Target Start/End: Original strand, 11695855 - 11695967
Alignment:
Q  238 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 337  Q
    |||||||||||| |||||| ||| ||||| || || |  |||| |||||||||| |||||| |||| || ||||||||||  ||||| |||| ||| ||     
T  11695855 ataagctataaaatgtttttatagactattctggaaagcttatgaaaataagttgaaaacagcttatggacatgtcataaactgtttccatatgctttcc 11695954  T
Q  338 caaacagtctcac 350  Q
    |||||| ||||||    
T  11695955 caaacaatctcac 11695967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 15579533 - 15579585
Alignment:
Q  295 aacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||||||||| || ||||||||||||||||| || |||||||| ||||||||||    
T  15579533 aacaacttatggacatgtcataagttgtttccacaagctctcccaaacagtct 15579585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 345
Target Start/End: Complemental strand, 28689532 - 28689421
Alignment:
Q  236 atataagctataaattgttttcataaa--ctatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 333  Q
    ||||||||||||| ||||||||||| |  ||||| | || |  |||| |||||||| | ||||||||||| || ||||||||||| ||||| | |||| |    
T  28689532 atataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagtt 28689433  T
Q  334 ctctcaaacagt 345  Q
    |||| |||||||    
T  28689432 ctctaaaacagt 28689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 33108653 - 33108605
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 331  Q
    ||||||||| ||||||||||| ||||||| ||| |||||||||||||||    
T  33108653 aaataagttgaaaacaacttatggtcatggcatgagttgttttcataag 33108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 36151582 - 36151502
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataa 317  Q
    |||||| |||||||||||||| ||||| ||||||| ||  |||| |||||||||| ||||||  ||| || ||||||||||    
T  36151582 tataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaataagttgaaaacaggttatggacatgtcataa 36151502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 336
Target Start/End: Complemental strand, 39270503 - 39270403
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||| |||||  ||||||||||| ||| | ||||||   ||| |||||||||| |||||| |||| || |||| || ||| ||||||||||||||||    
T  39270503 atataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatgccaaaagctgttttcataagctct 39270404  T
Q  336 c 336  Q
    |    
T  39270403 c 39270403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 350
Target Start/End: Complemental strand, 43371891 - 43371855
Alignment:
Q  314 ataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||| |||||||||||||||||||||||||||||||    
T  43371891 ataagctgttttcataagctctctcaaacagtctcac 43371855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 350
Target Start/End: Complemental strand, 4034020 - 4033981
Alignment:
Q  311 gtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4034020 gtcataagttattttcataagctctctcaaacaatctcac 4033981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 4481968 - 4482031
Alignment:
Q  282 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 345  Q
    |||||||| | |||||| |||| |  ||||| |||||||||||||||||| |||||||||||||    
T  4481968 aaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 4482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 6279392 - 6279499
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    |||||||| |||| | ||||||||| ||||||||||||  ||||  ||||| | | ||||||||||| || |||||  | |  ||||| |||||||||||    
T  6279392 tataagctttaaactattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgtggttaactgtttccataagctctc 6279491  T
Q  337 tcaaacag 344  Q
    ||||||||    
T  6279492 tcaaacag 6279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 10744308 - 10744399
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 342  Q
    ||||||||||| || || ||||||| ||||||||||||| | |||||| |||| |  |||| |||||| |||||||| ||| |||| |||||    
T  10744308 tgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttttcacaagttctcccaaac 10744399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 35668963 - 35669075
Alignment:
Q  235 aatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 334  Q
    ||||||| ||||||| |||||||||||  ||||||  | || ||||  ||||||||| ||||||| ||| || ||| ||||||| || |||||||||       
T  35668963 aatataaactataaactgttttcataacttatcctgtaaaatttatggaaataagttgaaaacaatttatggacatatcataagctgctttcataag--t 35669060  T
Q  335 tctcaaacagtctca 349  Q
    |||||||||||||||    
T  35669061 tctcaaacagtctca 35669075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 2522636 - 2522698
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtc 313  Q
    |||||||||||||||| || ||||| ||||  ||||||||| ||||||| |||||| ||||||    
T  2522636 tgttttcataaactattctggagaatttatggaaataagttgaaaacaaattacggacatgtc 2522698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 349
Target Start/End: Complemental strand, 4549616 - 4549506
Alignment:
Q  240 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactt-acggtcatgtcataagttgttttcataagctctctc 338  Q
    |||||||||  ||||||||||| | ||||| ||||  ||||  ||||  ||| |||||||||| |  | |||||||||||||||||  |||||||||| |    
T  4549616 aagctataagatgttttcataagcaatcctggagagcttattgaaatttgttgaaaacaactttatagacatgtcataagttgtttctataagctctccc 4549517  T
Q  339 aaacagtctca 349  Q
    |||||||||||    
T  4549516 aaacagtctca 4549506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 17269242 - 17269356
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||| |||| |||||||||||| ||||||| ||||  |||    |||||||| ||||||||| | |  ||||||||||| | ||||||||||| ||    
T  17269242 atataagcaataagttgttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacatgtcataaggtattttcataagcact 17269341  T
Q  336 ctcaaacagtctcac 350  Q
      |||||| ||||||    
T  17269342 accaaacaatctcac 17269356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 349
Target Start/End: Complemental strand, 26779996 - 26779891
Alignment:
Q  243 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 342  Q
    |||||| |||||||||||| ||||| |  |||| |||| |||||||||| |||||||||||  ||   |||||||| |||||||| ||  |||| |||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaactta-tgtacggtcataaggtgttttcagaaattctcccaaac 26779898  T
Q  343 agtctca 349  Q
    |||||||    
T  26779897 agtctca 26779891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 34536222 - 34536264
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| |||||||||||||  ||||||||||||||||    
T  34536222 catgtcataagctgttttcataagccatctcaaacagtctcac 34536264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 340
Target Start/End: Original strand, 45234247 - 45234289
Alignment:
Q  298 aacttacggtcatgtcataagttgttttcataagctctctcaa 340  Q
    |||||| || ||||||||||||||||||||||| |||||||||    
T  45234247 aacttaagggcatgtcataagttgttttcataaactctctcaa 45234289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 49692058 - 49692016
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| | |||||||||| ||||||||||||||||||    
T  49692058 catgtcataagctattttcataagttctctcaaacagtctcac 49692016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 16980868 - 16980909
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||| |||||||||| |||||||||||||||| ||||||||    
T  16980868 atgtcgtaagttgtttccataagctctctcaaatagtctcac 16980909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 26946525 - 26946472
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataag 289  Q
    ||||||||||||| | |||||||||| ||||| ||||||||| || ||||||||    
T  26946525 atataagctataagtcgttttcataagctatcttagagaagtcatgaaaataag 26946472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 27963434 - 27963341
Alignment:
Q  250 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    |||||||||||| ||||  | ||||  ||||| ||||||| | ||||||||||| || ||||||||||| ||||   ||||||| |||||||||    
T  27963434 ttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgttaatataagctttctcaaaca 27963341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 29929642 - 29929585
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| |  |||||||| ||||||||||||||||||||  ||||||| ||||    
T  29929642 aaaacaacttatgcacatgtcatgagttgttttcataagctctccaaaacagtatcac 29929585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 37942004 - 37941955
Alignment:
Q  295 aacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 344  Q
    ||||||||| || |||||||||| ||||||  ||||||||||||||||||    
T  37942004 aacaacttatggacatgtcataaattgtttctataagctctctcaaacag 37941955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 38001645 - 38001702
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| |  || |||||||| |||||||||||| |||| |||||||||||||    
T  38001645 aaaacaacttatgaacaggtcataagctgttttcataagttctcccaaacagtctcac 38001702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 43722365 - 43722308
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 334  Q
    ||||||||||||| | |||||||| || |  ||||||||||||| |||||||||||||    
T  43722365 ttataaaaataagctgaaaacaacataagaacatgtcataagtttttttcataagctc 43722308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 44422691 - 44422804
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  | |||| |||| ||||||| ||||  |||| |||||||| |  |  || |||| || ||||||||||| | ||||||||||||||    
T  44422691 atataagctataagctatttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctattttcataagctct 44422790  T
Q  336 ctcaaacagtctca 349  Q
    | || |||||||||    
T  44422791 cccagacagtctca 44422804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 49521811 - 49521770
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||||||||||| || ||||||||||||||| |||||    
T  49521811 catgtcataagttgtttccacaagctctctcaaacaatctca 49521770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 2295163 - 2295203
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  2295163 tgtcataagctgttttcataagttctcccaaacagtctcac 2295203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 350
Target Start/End: Original strand, 4200304 - 4200340
Alignment:
Q  314 ataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  4200304 ataagttgttttcattagctctcacaaacagtctcac 4200340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 7356544 - 7356504
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    |||||||||||||||||| |||| |||||||||||| ||||    
T  7356544 catgtcataagttgtttttataaactctctcaaacaatctc 7356504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 15558224 - 15558276
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 303  Q
    |||||||||||  |||||||||||| ||||| ||||||| | |||||||||||    
T  15558224 tgttttcataagatatcctagagaacttatagaaataagctgaaaacaactta 15558276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 24153320 - 24153380
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 343  Q
    ||||||||| ||||||||| | ||  ||||||||||||||||  |||||||||| ||||||    
T  24153320 aaataagttaaaaacaactcatggatatgtcataagttgtttctataagctctcacaaaca 24153380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 34179957 - 34179917
Alignment:
Q  229 tgtttcaatataagctataaattgttttcataaactatcct 269  Q
    ||||| ||| ||||||||||| |||||||||||||||||||    
T  34179957 tgttttaatctaagctataaactgttttcataaactatcct 34179917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 49888760 - 49888812
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 289  Q
    |||||||||| | |||||||||||| ||||| ||||||| |||| ||||||||    
T  49888760 tataagctattagttgttttcataagctatcttagagaacttatgaaaataag 49888812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 50644258 - 50644218
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  50644258 tgtcgtaagttgttttcataagttctcccaaacagtctcac 50644218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 10272508 - 10272399
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    |||||||||||| |||||||||||| | ||| | ||||  |||| |||||||| | |||||||||||| | |||||||||||||||||  |||||| |||    
T  10272508 tataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgtttctataagcactc 10272409  T
Q  337 tcaaacagtc 346  Q
     |||| ||||    
T  10272408 ccaaatagtc 10272399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 345
Target Start/End: Original strand, 4619692 - 4619808
Alignment:
Q  229 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 328  Q
    |||||| |||||| ||||||| ||| ||||||| ||||| | ||||| ||||  ||||||| | ||| || |||| |  |||||||| ||||||||||||    
T  4619692 tgtttctatataatctataaactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcat 4619791  T
Q  329 aagctctctcaaacagt 345  Q
    |||||||| ||||||||    
T  4619792 aagctctcccaaacagt 4619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 41957514 - 41957430
Alignment:
Q  251 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||| ||||||| ||||| |||| |||||||| | ||||||||||| || ||||||||||| ||||| | ||||||||    
T  41957514 tgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttccgtaagctct 41957430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 37611282 - 37611179
Alignment:
Q  247 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||||| ||||| | ||||  ||||  ||||||  | |||||| |||| |  ||||||| |||||||||||||||||||||||||||| ||    
T  37611282 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatc 37611183  T
Q  347 tcac 350  Q
    ||||    
T  37611182 tcac 37611179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 37788012 - 37787909
Alignment:
Q  247 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||||| ||||| | ||||  ||||  ||||||  | |||||| |||| |  ||||||| |||||||||||||||||||||||||||| ||    
T  37788012 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatc 37787913  T
Q  347 tcac 350  Q
    ||||    
T  37787912 tcac 37787909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 37526277 - 37526163
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||| ||||||||||||  | | || ||||  ||||  ||||||| | |||||| ||||    ||||||||| ||||| ||||||||||||    
T  37526277 atataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctct 37526178  T
Q  336 ctcaaacagtctcac 350  Q
    |||||||||||||||    
T  37526177 ctcaaacagtctcac 37526163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 37588438 - 37588324
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    ||||||||||||| ||||||||||||  ||| || ||||  ||||  ||||||| | |||||| ||||    ||| ||||| ||||| ||||||||||||    
T  37588438 atataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttcataggttgtattcataagctct 37588339  T
Q  336 ctcaaacagtctcac 350  Q
    |||||||||||||||    
T  37588338 ctcaaacagtctcac 37588324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 13604886 - 13604825
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    |||| |||||||||| |||||||| || || ||||||||||| |||||||||||||||||||    
T  13604886 ttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataagctctctc 13604825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 14295498 - 14295611
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  ||||||| ||| ||||||| ||||  || || || |||| | |||||| ||||  | ||| ||||||| ||||||||||||||||    
T  14295498 atataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttatcgacatatcataagctgttttcataagctct 14295597  T
Q  336 ctcaaacagtctca 349  Q
    |||| |||||||||    
T  14295598 ctcagacagtctca 14295611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 37794774 - 37794679
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 333  Q
    ||||||||||| ||| ||||||| | |||||||| ||| |||||  ||||||| | |||||| |||| |  ||||||||||||||||||||||||||    
T  37794774 tataagctatagattattttcatgagctatcctataga-gttatcgaaataagctcaaaacagcttatgaacatgtcataagttgttttcataagct 37794679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 12242777 - 12242674
Alignment:
Q  247 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||||| ||||| | ||||  ||||  || |||| | ||||||||| | | |||||||||||||| ||| |||||||||||||||| | ||    
T  12242777 aaattgttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaataatc 12242678  T
Q  347 tcac 350  Q
    ||||    
T  12242677 tcac 12242674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 15246826 - 15246933
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacg-gtcatgtcataagttgttttcataagctct 335  Q
    |||||||||| |  ||||||||||| ||||| ||||||| | |||||||||||||  ||| |||||| |  | ||||||||||||| ||||||||| |||    
T  15246826 tataagctatgagctgttttcataagctatcttagagaaatgataaaaataagttgcaaaaaacttatgaatgatgtcataagttgctttcataagttct 15246925  T
Q  336 ctcaaaca 343  Q
    | ||||||    
T  15246926 cccaaaca 15246933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 336
Target Start/End: Original strand, 29363057 - 29363100
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
T  29363057 aaaacaacttatgggcatgtcataagttgttttcataagctctc 29363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 37690715 - 37690600
Alignment:
Q  236 atataagctataaattgttttcataaact-atcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 334  Q
    ||||||||||||| ||||||||||||| | ||  | ||||  ||||  ||||||| | |||||| ||||    ||||||||| ||||| |||||||||||    
T  37690715 atataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctc 37690616  T
Q  335 tctcaaacagtctcac 350  Q
    ||||||||||||||||    
T  37690615 tctcaaacagtctcac 37690600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 350
Target Start/End: Original strand, 7674641 - 7674754
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||| ||||| ||||||||||| ||||| | ||||| || | |||||||| | |||||| ||||    ||||||||||||||||| |||||| |||     
T  7674641 tataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttctt 7674740  T
Q  337 tcaaacagtctcac 350  Q
     ||| |||||||||    
T  7674741 ccaagcagtctcac 7674754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 10391333 - 10391448
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataa--aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 333  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||| |||  ||||||||| ||||||||| |  | ||||||||||  |||||| |||| ||    
T  10391333 atataagctataatttgtttttataagctatcctagag-agttttaaggaaataagttgaaaacaactaatagacatgtcataaagtgtttttataaact 10391431  T
Q  334 ctctcaaacagtctcac 350  Q
    ||  |||||| ||||||    
T  10391432 cttccaaacaatctcac 10391448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 347
Target Start/End: Original strand, 35960338 - 35960516
Alignment:
Q  169 ttatcatttaagtacttactcataagctatttccataatgaaatataaaaataaagtcag--tgtttcaatataagctataaattgttttcataaactat 266  Q
    ||||||| |||||| |||  ||||| ||||||| ||||| ||| |||||| ||||||||   | ||||| ||||| |||||| ||| |||||||| ||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaa-taaagtcaaactatttca-tataaactataagttgatttcataagctat 35960435  T
Q  267 cctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 347  Q
    ||| || |   || | ||||||| | |||||| |||| || |||||| ||||||| || |||||||||||||||| |||||    
T  35960436 cctggaaagcgtaaagaaataagctaaaaacatcttatggacatgtcgtaagttgcttccataagctctctcaaatagtct 35960516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 8090004 - 8090040
Alignment:
Q  312 tcataagttgttttcataagctctctcaaacagtctc 348  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8090004 tcataagttgttttcataagctctctcaaatagtctc 8090040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 10152388 - 10152440
Alignment:
Q  298 aacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||| || |||||||||||||||||||||||||||||  ||| ||||||||    
T  10152388 aacttatggacatgtcataagttgttttcataagctctccaaaatagtctcac 10152440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 15003592 - 15003504
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 324  Q
    ||||||||||||| | |||||||||| |||||| |||||  ||||  |||||| |  |||||||||||||  |||||| ||||||||||    
T  15003592 atataagctataagtggttttcataagctatccaagagagcttatggaaataaatcgaaaacaacttacgaacatgtcgtaagttgttt 15003504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 2568651 - 2568762
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    |||||||||||| |||||||||||| ||||| | ||||  | || |||||||| | |||| |||||| |   |||||||||| |||||||||||| |||     
T  2568651 tataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttctt 2568750  T
Q  337 tcaaacagtctc 348  Q
      ||||||||||    
T  2568751 ctaaacagtctc 2568762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 7319398 - 7319465
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 303  Q
    |||||||||||||| ||||||| ||| ||||| | ||||| ||||||||||||| | ||| |||||||    
T  7319398 atataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaagcaactta 7319465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 17368675 - 17368770
Alignment:
Q  243 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    |||||| |||||||||||| ||||| | |||| |||||  ||||||| | |||||  | || |  |||||||||||||||||||||||| ||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctctc 17368770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 350
Target Start/End: Complemental strand, 28586817 - 28586730
Alignment:
Q  263 ctatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||||  ||||  ||||||| | |||||| |||||||  |||||||||| | ||| ||||||||||| |||||||| ||||    
T  28586817 ctatcctagagagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcccaaacagtttcac 28586730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 10907442 - 10907484
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||| |||||||||||||||||||||||  |||||||||||||    
T  10907442 catgacataagttgttttcataagctcttccaaacagtctcac 10907484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 12425564 - 12425630
Alignment:
Q  237 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 303  Q
    ||||||||||||  |||||||| || ||||| | ||||| |||| |||||||||| |||||||||||    
T  12425564 tataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaactta 12425630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 12460007 - 12459965
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  12460007 catgtcataagttgttttcataggttctcccaaacagtctcac 12459965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 14980559 - 14980613
Alignment:
Q  294 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 348  Q
    |||||||||| |  ||||||||||||  |||| ||||||||||||||||||||||    
T  14980559 aaacaacttatgtacatgtcataagtcatttttataagctctctcaaacagtctc 14980613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 29590660 - 29590594
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||||| ||||||||||| || || |||||||||| | | ||||||||  ||||||||||||||    
T  29590660 aaataagttgaaaacaacttatggacaagtcataagttttgtccataagctaactcaaacagtctca 29590594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 38047885 - 38047847
Alignment:
Q  308 catgtcataagttgttttcataagctctctcaaacagtc 346  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  38047885 catgtcataagttgtttccataagctctcccaaacagtc 38047847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 5531083 - 5531124
Alignment:
Q  293 aaaacaacttacggtcatgtcataagttgttttcataagctc 334  Q
    ||||||||||| || ||| |||||||||||||||||||||||    
T  5531083 aaaacaacttatggacatatcataagttgttttcataagctc 5531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 350
Target Start/End: Original strand, 29336699 - 29336736
Alignment:
Q  313 cataagttgttttcataagctctctcaaacagtctcac 350  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  29336699 cataagttgtttccataagctctctcaatcagtctcac 29336736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 30269764 - 30269711
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||| | ||||||||||| || ||||| |||||||||||| ||||||||||    
T  30269764 aaataagctaaaaacaacttatgggcatgttataagttgttttaataagctctc 30269711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 2092582 - 2092518
Alignment:
Q  277 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 341  Q
    |||| |||| ||||| ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  2092582 ttatgaaaaaaagttgaaaacaacttatggacatgccataagttgtttcaataagctctcccaaa 2092518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 11457148 - 11457204
Alignment:
Q  294 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||| |||| || ||||||||||||||||| ||||||||||   ||||||||||||    
T  11457148 aaacagcttatggacatgtcataagttgtttccataagctcttcaaaacagtctcac 11457204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 336
Target Start/End: Complemental strand, 15402903 - 15402807
Alignment:
Q  240 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 336  Q
    ||||||||| |||||||||||| ||||  |||||||  |||| |||| || | ||||||||||| |  ||| |||||| |||||||| |||| ||||    
T  15402903 aagctataagttgttttcataacctattttagagaacgtatagaaattagctgaaaacaacttatgaacatatcataatttgttttcgtaagttctc 15402807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 15905404 - 15905364
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||||||||||||| | ||||||    
T  15905404 tgtcataagctgttttcataagctctctcaaagactctcac 15905364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 16457982 - 16457942
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  16457982 tgtcataagctgttttcataagttctcccaaacagtctcac 16457942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 19113123 - 19113083
Alignment:
Q  310 tgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  19113123 tgtcataagttattttcgtaagctctcccaaacagtctcac 19113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 19369305 - 19369405
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||| ||||||  || ||||||||||| ||| |||||  ||||| |||||| || |||||| ||||| | |||||||| || || || ||||||||||    
T  19369305 atataaactataagctggtttcataaactttcccagagagcttatagaaataaattgaaaacagcttacagacatgtcatgagctgcttccataagctct 19369404  T
Q  336 c 336  Q
    |    
T  19369405 c 19369405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 21768229 - 21768173
Alignment:
Q  282 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 338  Q
    |||||||||| |||||| | || || ||||||||||| ||||||||||||| |||||    
T  21768229 aaaataagttgaaaacagcgtatggacatgtcataagctgttttcataagcactctc 21768173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 340
Target Start/End: Complemental strand, 36542360 - 36542256
Alignment:
Q  236 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 335  Q
    |||||||||||||  || || ||||| ||||||||||||  || |  ||||||||| |||||| |||  || ||||||||||| ||||| |||||  |||    
T  36542360 atataagctataagctgattccataagctatcctagagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgtttccataaaatct 36542261  T
Q  336 ctcaa 340  Q
    |||||    
T  36542260 ctcaa 36542256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 10648 - 10581
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||| | ||||||||||| || |||||||| |||||||| |||||||| | ||||||||||||||    
T  10648 aaataagctgaaaacaacttatggacatgtcattagttgtttacataagctttgtcaaacagtctcac 10581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 9669 - 9606
Alignment:
Q  282 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 345  Q
    |||||||| | |||||| |||| |  ||||| |||||||||||||||||| |||||||||||||    
T  9669 aaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 349
Target Start/End: Original strand, 306332 - 306431
Alignment:
Q  250 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    |||||||||||| ||||||||||||  ||||  || |||| | |||||| |||| || ||||||||||| ||||| ||||||| | ||| || |||||||    
T  306332 ttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccataagcgcactcgaagagtctca 306431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 27615 - 27681
Alignment:
Q  283 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 349  Q
    ||||||| | |||||||||||  | ||||||||||| | ||| ||||||||||| ||||||||||||    
T  27615 aaataagctgaaaacaacttatagccatgtcataagctatttccataagctctcccaaacagtctca 27681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 6611 - 6652
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||| ||||||||||| |||||||    
T  6611 atgtcataacttgttttcataatctctctcaaactgtctcac 6652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 6609 - 6650
Alignment:
Q  309 atgtcataagttgttttcataagctctctcaaacagtctcac 350  Q
    ||||||||| |||||||||||| ||||||||||| |||||||    
T  6609 atgtcataacttgttttcataatctctctcaaactgtctcac 6650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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