View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13301_low_1 (Length: 603)
Name: NF13301_low_1
Description: NF13301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13301_low_1 |
 | |
|
| [»] scaffold0163 (3 HSPs) |
| | |
|
| [»] scaffold0054 (2 HSPs) |
| | |
|
| [»] scaffold0134 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 291; Significance: 1e-163; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 10 - 399
Target Start/End: Original strand, 16660817 - 16661216
Alignment:
| Q |
10 |
ttgcaccgtgaatagatcagaccatgagaggtcgcggtttgtgtcattttctaacgttataggaatgatggttttaacgttattgacggcgaaagcggag |
109 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16660817 |
ttgcaccgtgaagagagcagaccatgagaggtagaggtttgtgtcattttctaacgttataggaatgatggttttaacgttattgacggcgaaagcggag |
16660916 |
T |
|
| Q |
110 |
tgaaattttggagaattttgaggagtgagggtcggtgctgccatggtaaagcagaagggaagcggcgacggtgagaagagaaagggttaggtttggatcg |
209 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16660917 |
tgaaattttggagaatgttgaggagtgggggtcggtgctgccatggtaaagcagaagggaagcggcgacggtgagaagag-aagggttaggtttggatcg |
16661015 |
T |
|
| Q |
210 |
gaagatctgataccatgtaagaatataatttcctgtcttttattgatatcaattgtgaataatatacaactattgttgattctaatctagaaactaattg |
309 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16661016 |
gaagaggtgataccatgtcagaatataattctctgtgtttcattgatatcaattgtgaataatatacaactattgttgattctattctagaaactaattg |
16661115 |
T |
|
| Q |
310 |
attgctaatcaatataattcatgactaatc-----------aattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattataatagg |
398 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
16661116 |
attgctaatcaatataatttatgactaatcaattgctaatgaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattctaatagg |
16661215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 225 - 396
Target Start/End: Original strand, 16656458 - 16656640
Alignment:
| Q |
225 |
tgtaagaatataatttcctgtcttttattgatatcaattgtgaataatatacaactattgttgattctaatctagaaactaattgattgctaatcaatat |
324 |
Q |
| |
|
||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16656458 |
tgtaagaatataattctctgtgtttcattgatatcaattgtgaataatatacaactattgttgattctattctagaaactaattgattgctaatcaatat |
16656557 |
T |
|
| Q |
325 |
aattcatgactaatc-----------aattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattataata |
396 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
16656558 |
aatttatgactaatcaattgctaatgaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattctaata |
16656640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 262 - 396
Target Start/End: Original strand, 4750620 - 4750754
Alignment:
| Q |
262 |
ttgtgaataatatacaactattgttgattctaatctagaaactaattgattgctaatcaatataattcatgactaatcaattgctaatgaatatttacaa |
361 |
Q |
| |
|
||||||||||||||||| |||||| || ||| | |||||| ||| | ||| ||| | |||||||||| | |||| |||| |||||||||||| ||| |
|
|
| T |
4750620 |
ttgtgaataatatacaattattgtcaatcctattttagaaattaaataattactagtgaatataattcctagttaatgaatttataatgaatattttcaa |
4750719 |
T |
|
| Q |
362 |
gtcaaacatacaatgaatatagacatattataata |
396 |
Q |
| |
|
|||||||||||||| |||||| ||||||| ||||| |
|
|
| T |
4750720 |
gtcaaacatacaataaatatatacatattctaata |
4750754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 4743964 - 4744020
Alignment:
| Q |
340 |
aattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattataata |
396 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||| |||||| ||||||||||||| |
|
|
| T |
4743964 |
aattgctaatgaatatttataagtcaaacatataataaatatatacatattataata |
4744020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 34948395 - 34948319
Alignment:
| Q |
320 |
aatataattcatgactaatcaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattataata |
396 |
Q |
| |
|
||||||||| ||| |||| ||||| |||||||||||||||| | || |||||||| |||||||||||||| ||||| |
|
|
| T |
34948395 |
aatataatttatgggtaatgaattgttaatgaatatttacaaataaatcatacaataaatatagacatattttaata |
34948319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 536 - 586
Target Start/End: Original strand, 9594465 - 9594515
Alignment:
| Q |
536 |
atggatttgagaaatctaatttgattttgttctcgaacctctcaccagaaa |
586 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| ||||| |||||||||| |
|
|
| T |
9594465 |
atggatttgagaaatctaatttaacattgttctcaaacctttcaccagaaa |
9594515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 121 - 397
Target Start/End: Complemental strand, 33283304 - 33283029
Alignment:
| Q |
121 |
agaattttgaggagtgagggtcggtgctgccatggtaaagcagaagggaagcggcgacggtgagaagagaaagggttaggtttggatcggaagatctgat |
220 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||| |
|
|
| T |
33283304 |
agaattttgaggagtgggggtcggtgctgccatggtaaagcagaagggaagcggcgacggtgagaagagaatgg-ttaggtttggatcggaagaggtgat |
33283206 |
T |
|
| Q |
221 |
accatgtaagaatataatttcctgtcttttattgatatcaattgtgaataatatacaactattgttgattctaatctagaaactaattgattgctaatca |
320 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
33283205 |
accatgtaagaatataattctctgtctttcattgatatcaattgtgaataatatacaactattgttgattctattctagaaactaattgattgctaatga |
33283106 |
T |
|
| Q |
321 |
atataattcatgactaatcaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattataatag |
397 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
33283105 |
atataattcatgactaatcaattgctaatgaatatttacaagtcaaacatacaatgaatataaacatattctaatag |
33283029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 225 - 398
Target Start/End: Original strand, 33691763 - 33691935
Alignment:
| Q |
225 |
tgtaagaatataatttcctgtctttt-attgatatcaattgtgaataatatacaactattgttgattctaatctagaaactaattgattgctaatcaata |
323 |
Q |
| |
|
||||||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
33691763 |
tgtaagaatataatt--ctctcttttcatggatatcaattgtgaataatatacaactattgttgattctattctaaaaactaattgattgctaatcaata |
33691860 |
T |
|
| Q |
324 |
taattcatgactaatcaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattataatagg |
398 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
33691861 |
taattcatgactaatcaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattctaatagg |
33691935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 224 - 396
Target Start/End: Complemental strand, 33287815 - 33287632
Alignment:
| Q |
224 |
atgtaagaatataatttcctgtcttttattgatatcaattgtgaataatatacaactattgttgattctaatctagaaactaattgattgctaatcaata |
323 |
Q |
| |
|
|||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
33287815 |
atgtaagaatataattccttgtctttcattgatatcaattgtgaataatatacaactattgttgattctattctagaaactaattgattgctaatcaata |
33287716 |
T |
|
| Q |
324 |
taattcatgactaatcaattgctaat-----------gaatatttacaagtcaaacatacaatgaatatagacatattataata |
396 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
33287715 |
taattcatgactaatcaattgctaatgaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattctaata |
33287632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 33283451 - 33283339
Alignment:
| Q |
10 |
ttgcaccgtgaatagatcagaccatgagaggtcgcggtttgtgtcattttctaacgttataggaatgatggttttaacgttattgacggcgaaagcggag |
109 |
Q |
| |
|
||||||| |||| ||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33283451 |
ttgcaccttgaagagagcaaaccatgagaggtagaggtttgtgtcattttctaacgttataggaatgatggttttaacgttattgacggcgaaagcggag |
33283352 |
T |
|
| Q |
110 |
tgaaattttggag |
122 |
Q |
| |
|
||||||||||||| |
|
|
| T |
33283351 |
tgaaattttggag |
33283339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0163 (Bit Score: 219; Significance: 1e-120; HSPs: 3)
Name: scaffold0163
Description:
Target: scaffold0163; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 122 - 396
Target Start/End: Original strand, 35233 - 35506
Alignment:
| Q |
122 |
gaattttgaggagtgagggtcggtgctgccatggtaaagcagaagggaagcggcgacggtgagaagagaaagggttaggtttggatcggaagatctgata |
221 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
35233 |
gaattttgaggagtgggggtcggtgctgccatggtaaagcagaagcgaagcggcgacggtgagaagagaa-gggttaggtttggatcggaagaggtgata |
35331 |
T |
|
| Q |
222 |
ccatgtaagaatataatttcctgtcttttattgatatcaattgtgaataatatacaactattgttgattctaatctagaaactaattgattgctaatcaa |
321 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
35332 |
ccatgtaagaatataattttgtgtctttcattgatatcaattatgaataatatacaactattgttgattctattctagaaactaattgattgctaatcaa |
35431 |
T |
|
| Q |
322 |
tataattcatgactaatcaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattataata |
396 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35432 |
tataattcatgactaaacaattgctaattaatatttacaagtcaaacatacaatgaatatagacatattctaata |
35506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0163; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 225 - 396
Target Start/End: Original strand, 30682 - 30864
Alignment:
| Q |
225 |
tgtaagaatataatttcctgtcttttattgatatcaattgtgaataatatacaactattgttgattctaatctagaaactaattgattgctaatcaatat |
324 |
Q |
| |
|
||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
30682 |
tgtaagaatataagtttgtgtctttcattgatatcaattgtgaataatatacaactattgttgattctattctagaaactaattgattgctaattaatat |
30781 |
T |
|
| Q |
325 |
aattcatgactaatcaattg-----------ctaatgaatatttacaagtcaaacatacaatgaatatagacatattataata |
396 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30782 |
aattcatgactaattaattgctaatgaattactaatgaatatttacaagtcaaacatacaatgaatatagacatattctaata |
30864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0163; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 35085 - 35197
Alignment:
| Q |
10 |
ttgcaccgtgaatagatcagaccatgagaggtcgcggtttgtgtcattttctaacgttataggaatgatggttttaacgttattgacggcgaaagcggag |
109 |
Q |
| |
|
||||||| |||| ||| |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
35085 |
ttgcaccttgaagagagcagaccttgagaggtagaggtttgtgtcattttctaacgttataggaatgatggttttaacgttattgacggcgaaagcagag |
35184 |
T |
|
| Q |
110 |
tgaaattttggag |
122 |
Q |
| |
|
||||||||||||| |
|
|
| T |
35185 |
tgaaattttggag |
35197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 24256 - 24334
Alignment:
| Q |
319 |
caatataattcatgactaatcaattgctaatgaatatttacaagtcaaacatacaatgaatatagacatattataatag |
397 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
24256 |
caatataattcatgactaatcaattgctaatgaatatttacaagtcaaacatacgatgaatatagacatattctaatag |
24334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 349
Target Start/End: Complemental strand, 24236 - 24202
Alignment:
| Q |
315 |
taatcaatataattcatgactaatcaattgctaat |
349 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
24236 |
taatcaatataattcatgactaatcaattgctaat |
24202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 8396728 - 8396832
Alignment:
| Q |
121 |
agaattttgaggagtgagggtcggtgctgccatggtaaagcagaagggaagcggcgacggtgagaagagaaagggttaggtttggatcggaagatctgat |
220 |
Q |
| |
|
|||||||||||||| | |||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
8396728 |
agaattttgaggagggggggttgctgctgccatggtaaagtagaagggaaatggcgacggtgagaagag-aagggttaggtttggatcggaagaggtgat |
8396826 |
T |
|
| Q |
221 |
accatg |
226 |
Q |
| |
|
|||||| |
|
|
| T |
8396827 |
accatg |
8396832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 8396577 - 8396681
Alignment:
| Q |
18 |
tgaatagatcagaccatgagaggtcgcggtttgtgtcattttctaacgttataggaatgatggttttaacgttattgacggcgaaagcggagtgaaattt |
117 |
Q |
| |
|
|||| ||| ||||||||| ||||| | |||| ||||||||||| ||||||||||| ||||||||||| |||||||||| || |||||||||||||||||| |
|
|
| T |
8396577 |
tgaagagagcagaccatgcgaggtagaggttagtgtcattttccaacgttatagggatgatggttttgacgttattgatggagaaagcggagtgaaattt |
8396676 |
T |
|
| Q |
118 |
tggag |
122 |
Q |
| |
|
||||| |
|
|
| T |
8396677 |
tggag |
8396681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 536 - 586
Target Start/End: Complemental strand, 42445676 - 42445626
Alignment:
| Q |
536 |
atggatttgagaaatctaatttgattttgttctcgaacctctcaccagaaa |
586 |
Q |
| |
|
||||||||||| |||||||||||| || ||||||||||||| |||||||| |
|
|
| T |
42445676 |
atggatttgagtaatctaatttgaccttattctcgaacctctgaccagaaa |
42445626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 25039153 - 25038997
Alignment:
| Q |
9 |
tttgcaccgtgaatagatcagaccatgagaggtcgcggtttgtgtcattttctaacgttataggaatgatggttttaacgttattgacggcgaaagcgga |
108 |
Q |
| |
|
|||||||| |||| ||| ||| |||| |||||| | |||| | |||||||| ||| |||||||| ||||||||||| | ||||||||||| ||||||| | |
|
|
| T |
25039153 |
tttgcaccttgaaaagagcaggccataagaggtagaggttagagtcattttataatgttatagggatgatggttttgatgttattgacggtgaaagcgaa |
25039054 |
T |
|
| Q |
109 |
gtgaaattttg--gagaattttgaggagtgagggtcggtgctgccatggtaaagcag |
163 |
Q |
| |
|
||| ||| ||| ||||||||||| || | ||||||| |||| |||||| ||||| |
|
|
| T |
25039053 |
gtggaatgttgatcagaattttgagtaggggaggtcggtactgcaatggtagagcag |
25038997 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 13116154 - 13116106
Alignment:
| Q |
348 |
atgaatatttacaagtcaaacatacaatgaatatagacatattataata |
396 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
13116154 |
atgaatatttacaagtcaaatatacaatgaatataaacatattataata |
13116106 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000006; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 586
Target Start/End: Complemental strand, 34281304 - 34281253
Alignment:
| Q |
535 |
aatggatttgagaaatctaatttgattttgttctcgaacctctcaccagaaa |
586 |
Q |
| |
|
|||| |||||| ||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
34281304 |
aatgcatttgaaaaatctaatttgattttattcttgaacctctcaccagaaa |
34281253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 533 - 583
Target Start/End: Complemental strand, 29299425 - 29299375
Alignment:
| Q |
533 |
caaatggatttgagaaatctaatttgattttgttctcgaacctctcaccag |
583 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
|
|
| T |
29299425 |
caaatggatttgagaaatctaatttgacttttttctcaaacttctcaccag |
29299375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 534 - 586
Target Start/End: Original strand, 29152801 - 29152853
Alignment:
| Q |
534 |
aaatggatttgagaaatctaatttgattttgttctcgaacctctcaccagaaa |
586 |
Q |
| |
|
||||| |||||| ||||||||||||||||| || | |||||||| |||||||| |
|
|
| T |
29152801 |
aaatgcatttgaaaaatctaatttgattttatttttgaacctctaaccagaaa |
29152853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0134 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 536 - 586
Target Start/End: Original strand, 16960 - 17010
Alignment:
| Q |
536 |
atggatttgagaaatctaatttgattttgttctcgaacctctcaccagaaa |
586 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
16960 |
atggatttgagaaatctaatttgaccttattctcaaacctctcaccagaaa |
17010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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