View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13303_high_1 (Length: 703)

Name: NF13303_high_1
Description: NF13303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13303_high_1
NF13303_high_1
[»] chr3 (8 HSPs)
chr3 (14-685)||(47248796-47249466)
chr3 (29-259)||(47242366-47242596)
chr3 (358-465)||(47253966-47254073)
chr3 (372-460)||(47242723-47242811)
chr3 (510-584)||(24778609-24778682)
chr3 (509-585)||(48532165-48532241)
chr3 (510-585)||(40991639-40991713)
chr3 (505-553)||(37083287-37083335)
[»] chr4 (7 HSPs)
chr4 (509-616)||(22420716-22420822)
chr4 (509-585)||(25575032-25575107)
chr4 (536-615)||(29209201-29209279)
chr4 (505-554)||(15665339-15665388)
chr4 (509-554)||(48174092-48174137)
chr4 (520-584)||(37042674-37042737)
chr4 (509-585)||(45209204-45209279)
[»] chr6 (3 HSPs)
chr6 (557-615)||(3963967-3964025)
chr6 (618-663)||(35069524-35069569)
chr6 (509-585)||(28085584-28085659)
[»] chr1 (5 HSPs)
chr1 (520-616)||(30396739-30396834)
chr1 (557-616)||(15577595-15577654)
chr1 (510-584)||(21769711-21769784)
chr1 (520-585)||(29128991-29129056)
chr1 (509-585)||(41560437-41560512)
[»] chr8 (4 HSPs)
chr8 (510-585)||(45419443-45419517)
chr8 (521-614)||(23492213-23492305)
chr8 (521-601)||(25117477-25117556)
chr8 (509-585)||(30198265-30198340)
[»] chr7 (5 HSPs)
chr7 (509-583)||(1011256-1011329)
chr7 (538-616)||(22174177-22174254)
chr7 (509-615)||(40008430-40008535)
chr7 (509-585)||(2885721-2885796)
chr7 (509-585)||(37618153-37618228)
[»] chr5 (2 HSPs)
chr5 (615-653)||(43301001-43301039)
chr5 (619-663)||(34736440-34736484)
[»] chr2 (1 HSPs)
chr2 (509-585)||(9556368-9556443)


Alignment Details
Target: chr3 (Bit Score: 640; Significance: 0; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 640; E-Value: 0
Query Start/End: Original strand, 14 - 685
Target Start/End: Original strand, 47248796 - 47249466
Alignment:
Q  14 gacatcatcaactaatagtaataaaacaatatttcaactaacctttcgattctcacaagcaatcccaataaacctcctgaaagggaaacataacagttgc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47248796 gacatcatcaactaatagtaataaaacaatatttcaactaacctttcgattctcacaagcaatcccaataaacctcctgaaagggaaacataacagttgc 47248895  T
Q  114 acataaacatggtcagtccaattatttcatttcagcaaggatttatatattcaactttacagtaaaaaatgtccttacttaagaaatgttatcacattag 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47248896 acataaacatggtcagtccaattatttcatttcagcaaggatttatatattcaactttacagtaataaatgtccttacttaagaaatgttatcacattag 47248995  T
Q  214 ggttgcccatttcaaagtttagggacttaagtatgtcagcttccatttttaatacctacggtagcaggaagacaacaacatacatgagaaacaaagcaac 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47248996 ggttgcccatttcaaagtttagggacttaagtatgtcagcttccatttttaatacctacggtagcaggaagacaacaacatacatgagaaacaaagcaac 47249095  T
Q  314 acagtaagaaatgaaatgtacaaattttgattcaagagcaatgacatgaataggatatttacctcttccaggtcataggtgttatcagtaatttggcaga 413  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47249096 acagtaagaaataaaatgtacaaattttgattcaagagcaatgacatgaataggatatttacctcttccaggtcataggtgttatcagtaatttggcaga 47249195  T
Q  414 aatccactgcctttggtggggtaatttcttcatactttctgcatatttaaaagagataaatttaaatgcttaagcaaaatgacatagcaacaactaacaa 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47249196 aatccactgcctttggtggggtaatttcttcatactttctgcatatttaaaagagataaatttaaatgcttaagcaaaatgacatagcaacaactaacaa 47249295  T
Q  514 caaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattcattaat 613  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  47249296 caaccgccaagcctcatcacactaagtggggtctgctaca-ttgatcaaacaataccaaaatgttctatcatccatcttatctctatcaaattcattaat 47249394  T
Q  614 ctccaagggcatgtttgtattgtcttatttgagcttatatgctgacataaattaattgaaattgtttgaaag 685  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47249395 ctctaagggcatgtttgtattggcttatttgagcttatatgctgacataaattaattgaaattgtttgaaag 47249466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 47242366 - 47242596
Alignment:
Q  29 tagtaataaaacaatatttcaactaacctttcgattctcacaagcaatcccaataaacctcctgaaagggaaacataacagttgcacataaacatggtca 128  Q
    |||||||||||||| | ||||| | |||||| |||||||| |||||||||||| ||| ||||||||| | || || | ||  || | |||||||   | |    
T  47242366 tagtaataaaacaacaattcaaattaccttttgattctcagaagcaatcccaacaaaactcctgaaatg-aatcacagcaagtgaaaataaacagaatta 47242464  T
Q  129 gtccaattat-ttcatttcagcaaggatttatatattcaactttacagtaaaaaatgtccttacttaagaaatgttatcacattagggttgcccatttca 227  Q
    |||||||||  ||||||||| ||||| |||| |||||||| || ||| ||||||||||  |||||| |||||||| || |||||||||||||||||||||    
T  47242465 gtccaattaacttcatttcaacaaggctttagatattcaaattcacaataaaaaatgtatttactttagaaatgtgatgacattagggttgcccatttca 47242564  T
Q  228 aagtttagggacttaagtatgtcagcttccat 259  Q
    ||||| ||||  || |||||||||||||||||    
T  47242565 aagttcagggttttgagtatgtcagcttccat 47242596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 358 - 465
Target Start/End: Original strand, 47253966 - 47254073
Alignment:
Q  358 catgaataggatatttacctcttccaggtcataggtgttatcagtaatttggcagaaatccactgcctttggtggggtaatttcttcatactttctgcat 457  Q
    |||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||| || |||||||||||||  ||||||||||||||||||||     
T  47253966 catgaatatgatatttacctgtttcagctcataggtgttatcagtaatctggcagaaatcaacagcctttggtggggagatttcttcatactttctgcaa 47254065  T
Q  458 atttaaaa 465  Q
    ||||||||    
T  47254066 atttaaaa 47254073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 460
Target Start/End: Original strand, 47242723 - 47242811
Alignment:
Q  372 ttacctcttccaggtcataggtgttatcagtaatttggcagaaatccactgcctttggtggggtaatttcttcatactttctgcatatt 460  Q
    ||||||| || || ||||| ||||||||||| |||||||||||||| |  |||||||||||||| |||||||||||||| |||||||||    
T  47242723 ttacctcgtcaagatcatatgtgttatcagtgatttggcagaaatctatggcctttggtggggtgatttcttcatacttcctgcatatt 47242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 584
Target Start/End: Original strand, 24778609 - 24778682
Alignment:
Q  510 acaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatca 584  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||| | |||||||  |||||| ||||||||||||    
T  24778609 acaacaacagccaagccttatcccactaagtggggtcggctaca-tggatcaaattacaccataatgttctatca 24778682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 585
Target Start/End: Complemental strand, 48532241 - 48532165
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||||| |||||||  || ||| | |||||||||||    
T  48532241 aacaacaacaaccaagccttatcccactaagtggggtcggctacattggatcaaatgacgccatagtgttctatcat 48532165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 585
Target Start/End: Complemental strand, 40991713 - 40991639
Alignment:
Q  510 acaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||| |||||| || ||| |||||||||||||| |||||| | |||||||  |||||| |||||||||||||    
T  40991713 acaacaacagccaagtcttatctcactaagtggggtcagctaca-tggatcaaattacaccataatgttctatcat 40991639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 37083287 - 37083335
Alignment:
Q  505 aactaacaacaaccgccaagcctcatcacactaagtggggtctgctaca 553  Q
    |||||||||||||  |||||||| ||| |||||||||||||| ||||||    
T  37083287 aactaacaacaacaaccaagccttatcccactaagtggggtcggctaca 37083335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 509 - 616
Target Start/End: Original strand, 22420716 - 22420822
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattca 608  Q
    |||||||||  |||||||| ||| ||||||||||||||  ||||||  ||||||||||| ||| |||| |||||||| || | |||||||||| || |||    
T  22420716 aacaacaacaaccaagccttatcccactaagtggggtcaactacata-gatcaaacaacgccataatgctctatcatttaccatatctctatccaactca 22420814  T
Q  609 ttaatctc 616  Q
    ||||||||    
T  22420815 ttaatctc 22420822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 585
Target Start/End: Complemental strand, 25575107 - 25575032
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||| ||| |||||| |||||||||||||| | |||||||  |||||| |||||||||||||    
T  25575107 aacaacaacaaccaagccttatcccactaaatggggtctgctaca-tggatcaaattacaccacaatgttctatcat 25575032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 615
Target Start/End: Original strand, 29209201 - 29209279
Alignment:
Q  536 taagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattcattaatct 615  Q
    ||||||||||| |||||||| ||||||||||| ||| |||| |||||||| || | ||| |||||| || ||||||||||    
T  29209201 taagtggggtcggctacatt-gatcaaacaacgccataatgctctatcatataccatatttctatccaactcattaatct 29209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 15665388 - 15665339
Alignment:
Q  505 aactaacaacaaccgccaagcctcatcacactaagtggggtctgctacat 554  Q
    |||||||||||||  |||||||| ||| |||||||||||||| |||||||    
T  15665388 aactaacaacaacaaccaagccttatcccactaagtggggtcagctacat 15665339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 554
Target Start/End: Original strand, 48174092 - 48174137
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacat 554  Q
    |||||||||  |||||||| ||| ||||||||||||||||||||||    
T  48174092 aacaacaacaaccaagccttatcccactaagtggggtctgctacat 48174137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 520 - 584
Target Start/End: Original strand, 37042674 - 37042737
Alignment:
Q  520 ccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatca 584  Q
    |||||||| ||| |||||||| ||||| |||||||  |||||||| |||||| ||||||||||||    
T  37042674 ccaagccttatcccactaagtcgggtcggctacatg-gatcaaacgacaccataatgttctatca 37042737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 585
Target Start/End: Original strand, 45209204 - 45209279
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||| | |||||||| || ||| ||| |||||||||    
T  45209204 aacaacaacaaccaagccttatcccactaagtggggtcggctaca-tggatcaaactacgccataatattctatcat 45209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 615
Target Start/End: Complemental strand, 3964025 - 3963967
Alignment:
Q  557 gatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattcattaatct 615  Q
    ||||||||||| ||  ||||||||||||| |||| ||||||||||||| ||||||||||    
T  3964025 gatcaaacaacgccgtaatgttctatcatatatcgtatctctatcaaactcattaatct 3963967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 663
Target Start/End: Original strand, 35069524 - 35069569
Alignment:
Q  618 aagggcatgtttgtattgtcttatttgagcttatatgctgacataa 663  Q
    |||||| ||||||||||| ||||||||||||||| | |||||||||    
T  35069524 aagggcctgtttgtattggcttatttgagcttatctactgacataa 35069569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 585
Target Start/End: Complemental strand, 28085659 - 28085584
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||| | |||||||  |||||| | |||||||||||    
T  28085659 aacaacaacaaccaagccttatcccactaagtggggtcggctaca-tggatcaaatgacaccatagtgttctatcat 28085584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 616
Target Start/End: Original strand, 30396739 - 30396834
Alignment:
Q  520 ccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattcattaatctc 616  Q
    |||||||| ||| |||||||||||||  ||||||   ||||||||  ||||| ||||||||||||| |||| |||| ||||| || |||||||||||    
T  30396739 ccaagccttatcccactaagtggggttggctacacg-gatcaaacgccaccataatgttctatcatatatcgtatccctatccaactcattaatctc 30396834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 616
Target Start/End: Complemental strand, 15577654 - 15577595
Alignment:
Q  557 gatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattcattaatctc 616  Q
    ||||||||||||| | ||||||||||||  |||| |||||||||| || |||||||||||    
T  15577654 gatcaaacaacacaataatgttctatcaaatatcatatctctatccaactcattaatctc 15577595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 584
Target Start/End: Original strand, 21769711 - 21769784
Alignment:
Q  510 acaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatca 584  Q
    ||||||||  |||||||| |||||||||||||||||| |||||| | |||||||  || ||| ||||||||||||    
T  21769711 acaacaacaaccaagccttatcacactaagtggggtcggctaca-tggatcaaattacgccataatgttctatca 21769784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 585
Target Start/End: Complemental strand, 29129056 - 29128991
Alignment:
Q  520 ccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||| ||| |||||||||||||| |||||||  ||||| |  |||||| |||||||||||||    
T  29129056 ccaagccttatctcactaagtggggtcggctacatgggatcatattacaccataatgttctatcat 29128991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 585
Target Start/End: Complemental strand, 41560512 - 41560437
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||| | |||||||  || ||| |||||||||||||    
T  41560512 aacaacaacaaccaagccttatcccactaagtggggtcggctaca-tggatcaaattacgccataatgttctatcat 41560437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 585
Target Start/End: Complemental strand, 45419517 - 45419443
Alignment:
Q  510 acaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    ||||||||  |||||||| ||| |||||||||||||| |||||| | |||||||  |||||| |||||||||||||    
T  45419517 acaacaacaaccaagccttatcccactaagtggggtcggctaca-tggatcaaattacaccataatgttctatcat 45419443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 614
Target Start/End: Complemental strand, 23492305 - 23492213
Alignment:
Q  521 caagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattcattaatc 614  Q
    ||||||| ||| |||||||||||||| |||||| | ||| |||  |||||| | ||||||||||| |||| ||| |||||| || |||||||||    
T  23492305 caagccttatctcactaagtggggtcggctaca-tggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcattaatc 23492213  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 521 - 601
Target Start/End: Complemental strand, 25117556 - 25117477
Alignment:
Q  521 caagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcatctatcttatctctatc 601  Q
    ||||||||||| |||| | |||||||||||||| | ||||||||||   || ||||||||||||| |||| | ||||||||    
T  25117556 caagcctcatcccacttaatggggtctgctaca-tggatcaaacaatgtcataatgttctatcatatatcatttctctatc 25117477  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 585
Target Start/End: Original strand, 30198265 - 30198340
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||| ||| |||||||||||||| || ||| | |||||||| |||||| ||| |||||||||    
T  30198265 aacaacaacaaccaagccttatcccactaagtggggtcggcaaca-tagatcaaactacaccataatattctatcat 30198340  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000006; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 583
Target Start/End: Complemental strand, 1011329 - 1011256
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatc 583  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||| | |||||||  |||||| |||||||||||    
T  1011329 aacaacaacaaccaagccttatcccactaagtggggtcggctaca-tagatcaaattacaccataatgttctatc 1011256  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 616
Target Start/End: Complemental strand, 22174254 - 22174177
Alignment:
Q  538 agtggggtctgctacatttgatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattcattaatctc 616  Q
    ||||||||| |||||||  ||||||||||| ||| ||||||||||||  || | ||| |||||| ||||||||||||||    
T  22174254 agtggggtcggctacatg-gatcaaacaacgccataatgttctatcacataccatatttctatctaattcattaatctc 22174177  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 615
Target Start/End: Original strand, 40008430 - 40008535
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcatctatcttatctctatcaaattca 608  Q
    |||||||||  ||||| || ||| || |||||| |||| |||||||  |||||||||||  || ||||||||||||| |||| | |||||||| || |||    
T  40008430 aacaacaacaaccaagtcttatctcattaagtgaggtcagctacatg-gatcaaacaacgacataatgttctatcatatatcatgtctctatccaactca 40008528  T
Q  609 ttaatct 615  Q
    |||||||    
T  40008529 ttaatct 40008535  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 585
Target Start/End: Original strand, 2885721 - 2885796
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||| | |||||||  |||||| | |||||||||||    
T  2885721 aacaacaacaaccaagccttatcccactaagtggggtcggctaca-tggatcaaattacaccatagtgttctatcat 2885796  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 585
Target Start/End: Complemental strand, 37618228 - 37618153
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||| | |||||||  |||||| | |||||||||||    
T  37618228 aacaacaacaaccaagccttatcccactaagtggggtcggctaca-tggatcaaatgacaccatagtgttctatcat 37618153  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 615 - 653
Target Start/End: Complemental strand, 43301039 - 43301001
Alignment:
Q  615 tccaagggcatgtttgtattgtcttatttgagcttatat 653  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  43301039 tccaagggcatgtttggattggcttatttgagcttatat 43301001  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 619 - 663
Target Start/End: Original strand, 34736440 - 34736484
Alignment:
Q  619 agggcatgtttgtattgtcttatttgagcttatatgctgacataa 663  Q
    |||||||||||| |||| ||||||||||||||| || ||||||||    
T  34736440 agggcatgtttggattgacttatttgagcttatctggtgacataa 34736484  T

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Target: chr2 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 585
Target Start/End: Original strand, 9556368 - 9556443
Alignment:
Q  509 aacaacaaccgccaagcctcatcacactaagtggggtctgctacatttgatcaaacaacaccaaaatgttctatcat 585  Q
    |||||||||  |||||||||||| |||||||||| ||| ||||||| | ||||||  |||||  |||||||||||||    
T  9556368 aacaacaacaaccaagcctcatcccactaagtggagtcggctacatgt-atcaaattacaccctaatgttctatcat 9556443  T

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