View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13305_low_1 (Length: 928)

Name: NF13305_low_1
Description: NF13305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13305_low_1
NF13305_low_1
[»] chr1 (16 HSPs)
chr1 (327-909)||(31344443-31345025)
chr1 (9-169)||(31344151-31344311)
chr1 (346-493)||(17452047-17452192)
chr1 (235-302)||(31344377-31344444)
chr1 (238-335)||(17451616-17451713)
chr1 (488-531)||(51334094-51334137)
chr1 (488-531)||(16351200-16351243)
chr1 (488-531)||(19106082-19106125)
chr1 (488-531)||(21830018-21830061)
chr1 (488-531)||(33391630-33391673)
chr1 (488-531)||(41355070-41355113)
chr1 (487-535)||(50613012-50613060)
chr1 (487-535)||(50620840-50620888)
chr1 (488-531)||(16079234-16079277)
chr1 (481-540)||(20913919-20913978)
chr1 (488-531)||(21836665-21836708)
[»] chr2 (24 HSPs)
chr2 (238-480)||(22496894-22497136)
chr2 (488-531)||(9609467-9609510)
chr2 (488-531)||(16924591-16924634)
chr2 (488-531)||(16981483-16981526)
chr2 (488-531)||(16998331-16998374)
chr2 (488-531)||(17063048-17063091)
chr2 (488-531)||(10868181-10868224)
chr2 (488-531)||(21146100-21146143)
chr2 (488-531)||(22325911-22325954)
chr2 (488-531)||(23188339-23188382)
chr2 (488-531)||(23599602-23599645)
chr2 (488-531)||(24261701-24261744)
chr2 (488-531)||(24709364-24709407)
chr2 (488-531)||(24879064-24879107)
chr2 (488-531)||(27217346-27217389)
chr2 (488-531)||(27370600-27370643)
chr2 (488-531)||(41609413-41609456)
chr2 (488-531)||(44379968-44380011)
chr2 (488-531)||(44386638-44386681)
chr2 (487-540)||(23209012-23209065)
chr2 (488-531)||(27385779-27385822)
chr2 (488-526)||(12830372-12830410)
chr2 (488-530)||(23086780-23086822)
chr2 (488-530)||(28350554-28350596)
[»] chr5 (27 HSPs)
chr5 (242-422)||(29484092-29484271)
chr5 (9-143)||(20316225-20316359)
chr5 (9-143)||(29483869-29484003)
chr5 (362-422)||(24143337-24143397)
chr5 (488-531)||(16356134-16356177)
chr5 (488-531)||(27518039-27518082)
chr5 (488-531)||(34566126-34566169)
chr5 (488-531)||(40708412-40708455)
chr5 (490-539)||(22472870-22472919)
chr5 (488-531)||(15000450-15000493)
chr5 (488-531)||(19769592-19769635)
chr5 (488-531)||(22333598-22333641)
chr5 (488-531)||(22344738-22344781)
chr5 (238-277)||(24565118-24565157)
chr5 (238-277)||(24606153-24606192)
chr5 (488-531)||(27609986-27610029)
chr5 (488-531)||(27669201-27669244)
chr5 (488-535)||(27686106-27686153)
chr5 (488-531)||(29476784-29476827)
chr5 (488-531)||(41770474-41770517)
chr5 (488-530)||(23669594-23669636)
chr5 (476-540)||(16066388-16066451)
chr5 (238-278)||(24143735-24143775)
chr5 (488-531)||(18775409-18775452)
chr5 (488-531)||(22134300-22134343)
chr5 (447-493)||(29484352-29484398)
chr5 (491-540)||(24580829-24580878)
[»] chr3 (29 HSPs)
chr3 (12-143)||(25784208-25784339)
chr3 (9-143)||(21028773-21028907)
chr3 (389-493)||(16221439-16221542)
chr3 (447-530)||(14057267-14057350)
chr3 (488-531)||(16635092-16635135)
chr3 (488-531)||(43162416-43162459)
chr3 (488-531)||(48424766-48424809)
chr3 (487-531)||(16757353-16757397)
chr3 (488-531)||(6600066-6600109)
chr3 (488-531)||(6609779-6609822)
chr3 (488-531)||(10004919-10004962)
chr3 (488-531)||(10905529-10905572)
chr3 (488-531)||(13252009-13252052)
chr3 (488-531)||(15349013-15349056)
chr3 (488-531)||(15403278-15403321)
chr3 (488-531)||(15725701-15725744)
chr3 (487-531)||(13028765-13028809)
chr3 (91-143)||(13512133-13512185)
chr3 (488-531)||(1981638-1981681)
chr3 (488-531)||(11297291-11297334)
chr3 (488-531)||(12497567-12497610)
chr3 (488-531)||(15338588-15338631)
chr3 (488-531)||(15590160-15590203)
chr3 (488-531)||(16691479-16691522)
chr3 (488-531)||(20062822-20062865)
chr3 (488-531)||(26793167-26793210)
chr3 (93-143)||(12159353-12159403)
chr3 (488-530)||(15008991-15009033)
chr3 (488-530)||(19444982-19445024)
[»] chr4 (27 HSPs)
chr4 (9-142)||(18321071-18321204)
chr4 (9-142)||(18453741-18453874)
chr4 (481-540)||(9851405-9851464)
chr4 (488-531)||(18296905-18296948)
chr4 (488-531)||(29039673-29039716)
chr4 (487-540)||(12370512-12370565)
chr4 (437-493)||(18942274-18942330)
chr4 (488-531)||(8053892-8053935)
chr4 (488-531)||(8386112-8386155)
chr4 (488-531)||(14304246-14304289)
chr4 (488-531)||(15364086-15364129)
chr4 (488-531)||(18227715-18227758)
chr4 (488-531)||(23955447-23955490)
chr4 (488-531)||(27711036-27711079)
chr4 (488-531)||(40472740-40472783)
chr4 (476-540)||(12132928-12132991)
chr4 (491-531)||(14267168-14267208)
chr4 (708-796)||(14449934-14450022)
chr4 (488-531)||(12523376-12523419)
chr4 (488-531)||(14680267-14680310)
chr4 (488-531)||(19779062-19779105)
chr4 (481-540)||(55375878-55375937)
chr4 (489-531)||(12476301-12476343)
chr4 (497-539)||(16684964-16685006)
chr4 (480-540)||(18550579-18550641)
chr4 (86-143)||(30275173-30275231)
chr4 (489-530)||(13879158-13879199)
[»] chr8 (26 HSPs)
chr8 (9-143)||(19862264-19862398)
chr8 (9-143)||(19866901-19867035)
chr8 (11-143)||(24678276-24678408)
chr8 (487-539)||(24818579-24818631)
chr8 (480-540)||(23452007-23452067)
chr8 (488-531)||(19112456-19112499)
chr8 (477-540)||(19862812-19862876)
chr8 (477-540)||(19867449-19867513)
chr8 (488-531)||(17674995-17675038)
chr8 (488-531)||(20018722-20018765)
chr8 (481-540)||(20653295-20653354)
chr8 (488-531)||(22121146-22121189)
chr8 (488-531)||(22134013-22134056)
chr8 (488-531)||(30314116-30314159)
chr8 (488-531)||(32599910-32599953)
chr8 (447-532)||(10453619-10453705)
chr8 (91-143)||(23451539-23451591)
chr8 (91-143)||(24496670-24496722)
chr8 (488-531)||(16409017-16409060)
chr8 (492-531)||(19485842-19485881)
chr8 (488-531)||(22046140-22046183)
chr8 (488-530)||(3274280-3274322)
chr8 (489-531)||(15440948-15440990)
chr8 (489-531)||(15533147-15533189)
chr8 (94-143)||(15727823-15727873)
chr8 (92-141)||(34302617-34302666)
[»] scaffold0001 (3 HSPs)
scaffold0001 (9-143)||(139084-139218)
scaffold0001 (481-540)||(172693-172752)
scaffold0001 (481-540)||(178396-178455)
[»] scaffold0035 (1 HSPs)
scaffold0035 (36-143)||(15403-15510)
[»] scaffold0481 (1 HSPs)
scaffold0481 (11-143)||(11224-11356)
[»] scaffold1559 (1 HSPs)
scaffold1559 (55-143)||(132-220)
[»] scaffold0443 (1 HSPs)
scaffold0443 (55-143)||(10366-10454)
[»] chr7 (21 HSPs)
chr7 (449-540)||(5764116-5764207)
chr7 (488-531)||(8198317-8198360)
chr7 (488-531)||(8707294-8707337)
chr7 (488-531)||(10870684-10870727)
chr7 (488-531)||(11553640-11553683)
chr7 (488-531)||(12687190-12687233)
chr7 (488-531)||(14332086-14332129)
chr7 (488-531)||(18177431-18177474)
chr7 (488-531)||(18552296-18552339)
chr7 (488-531)||(23517307-23517350)
chr7 (488-531)||(44791889-44791932)
chr7 (492-531)||(11237751-11237790)
chr7 (488-531)||(13685752-13685795)
chr7 (488-531)||(15161595-15161638)
chr7 (493-531)||(17854-17892)
chr7 (488-530)||(1493576-1493618)
chr7 (487-537)||(11316115-11316165)
chr7 (488-530)||(15114238-15114280)
chr7 (488-530)||(16928891-16928933)
chr7 (107-145)||(18450444-18450482)
chr7 (487-540)||(21675061-21675113)
[»] chr6 (20 HSPs)
chr6 (487-537)||(19566245-19566295)
chr6 (488-531)||(29592594-29592637)
chr6 (488-531)||(2875477-2875520)
chr6 (488-531)||(12497590-12497633)
chr6 (488-531)||(16550835-16550878)
chr6 (488-531)||(16627391-16627434)
chr6 (488-531)||(17032126-17032169)
chr6 (488-531)||(18932376-18932419)
chr6 (488-531)||(24313842-24313885)
chr6 (488-531)||(25112116-25112159)
chr6 (488-531)||(27187000-27187043)
chr6 (488-531)||(27262197-27262240)
chr6 (488-531)||(28263871-28263914)
chr6 (488-531)||(28342620-28342663)
chr6 (94-143)||(26588160-26588210)
chr6 (488-531)||(1537671-1537714)
chr6 (488-531)||(1543758-1543801)
chr6 (488-531)||(16964041-16964084)
chr6 (487-540)||(18838571-18838624)
chr6 (91-143)||(26587840-26587893)
[»] scaffold0149 (2 HSPs)
scaffold0149 (477-540)||(34999-35062)
scaffold0149 (91-143)||(35474-35526)
[»] scaffold0052 (1 HSPs)
scaffold0052 (488-531)||(11648-11691)
[»] scaffold0454 (1 HSPs)
scaffold0454 (488-531)||(6669-6712)
[»] scaffold0431 (1 HSPs)
scaffold0431 (488-531)||(7108-7151)
[»] scaffold0216 (1 HSPs)
scaffold0216 (488-531)||(7641-7684)
[»] scaffold0109 (1 HSPs)
scaffold0109 (488-531)||(34105-34148)
[»] scaffold0028 (3 HSPs)
scaffold0028 (488-531)||(42885-42928)
scaffold0028 (488-531)||(62020-62063)
scaffold0028 (488-531)||(8216-8259)
[»] scaffold0024 (1 HSPs)
scaffold0024 (484-535)||(108193-108244)
[»] scaffold0005 (1 HSPs)
scaffold0005 (488-531)||(308390-308433)
[»] scaffold0004 (1 HSPs)
scaffold0004 (487-539)||(370634-370687)
[»] scaffold0682 (1 HSPs)
scaffold0682 (487-535)||(6830-6878)
[»] scaffold1355 (1 HSPs)
scaffold1355 (488-531)||(407-450)
[»] scaffold0554 (1 HSPs)
scaffold0554 (481-540)||(2842-2900)
[»] scaffold0459 (1 HSPs)
scaffold0459 (488-531)||(145-188)
[»] scaffold0044 (2 HSPs)
scaffold0044 (488-531)||(351-394)
scaffold0044 (488-531)||(14091-14134)
[»] scaffold0029 (1 HSPs)
scaffold0029 (488-531)||(124876-124919)
[»] scaffold0020 (1 HSPs)
scaffold0020 (488-531)||(179948-179991)
[»] scaffold0011 (1 HSPs)
scaffold0011 (488-531)||(36877-36920)
[»] scaffold0074 (1 HSPs)
scaffold0074 (488-530)||(2896-2938)
[»] scaffold0064 (2 HSPs)
scaffold0064 (488-530)||(29303-29345)
scaffold0064 (488-530)||(41294-41336)


Alignment Details
Target: chr1 (Bit Score: 543; Significance: 0; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 327 - 909
Target Start/End: Original strand, 31344443 - 31345025
Alignment:
Q  327 ataattttatttctttatcccccacttattttattacttctactctgcacctcccacttctattttctaatcatattaatcctcaccacctatcaactat 426  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31344443 ataattttacttcttcatcccccacttactttattacttctactctgcacctcccacttctattttctaatcatattaatcctcaccacctatcaactat 31344542  T
Q  427 gataataaataaaacttcgtctatttaaccttattaatttaatcaaatagaaattcgggatgttacaactctcctccacttaaaggattttcgtcctcga 526  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31344543 gataataaataaaacttcttctatttaaccttattaatttaatcaaatagaaattcgggatgttacaactctcctccacttaaaggattttcgtcctcga 31344642  T
Q  527 aaattacctgaaggtgaccgctttggataaaacccccttcacattaacgtcttatgtttatctatcaaacacacatttcaccaatgattatcatcccata 626  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31344643 aaattacctgaaggtgaccgctttggataaaacccccttcacattaacgtcttatgtttatctatcaaacacacatttcaccaatgattatcatcccata 31344742  T
Q  627 tcacagctcatctaaactatgtctttaattagatacaattcactcactcataactaagcttaaaagatcaaactggaagttctcaacccatattatcatc 726  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  31344743 tcacagctcatctaaactatgtctttaattagatacaattcactcactcataactaaactaaaaagatcaaactgaaagttctcaacccatattatcatc 31344842  T
Q  727 ctaccctgctaagtaccaatatcaagctcgtgcctcttaatccttcaacttataactagcacccatctaatcctgaggagtagtggtaccactgtattct 826  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31344843 ctaccctgctaagtaccaataccaagctcgtgcctcttaatccttcaacttataactagcacccatctaatcctgaggagtagtggtaccactgtattct 31344942  T
Q  827 atattgagctttggattgagcaacatgctattgtcgatccgtcttggatccatgtaaatcctcggatctgtcaatatatgtga 909  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  31344943 atattgagctttggattgagcaacatgctattgtcgatccgtcttggatccatgtaaatcctaggatctatcaatatatgtga 31345025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 31344151 - 31344311
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatag 108  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31344151 acatcatcatcatgtacctacatcgttattttctcatcgaaattcacataatatcaacattaacatctatagagttcaaacaacccccatcatagaatag 31344250  T
Q  109 ataccctaaagtgaaaggaatctcccccttacctcaaagtctccgaaaatgcggcgcttga 169  Q
     ||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||    
T  31344251 gtaccctaaagtgaaaggaatctcacgcttacctcaaattctccgaaaatgcggagcttga 31344311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 346 - 493
Target Start/End: Original strand, 17452047 - 17452192
Alignment:
Q  346 ccccacttattttattacttctactctgcacctcccacttctattttctaatcatattaatcctcaccacctatcaactatgataataaataaaacttcg 445  Q
    |||||||| |||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||| ||||||||||  |  ||||||||||||| | ||    
T  17452047 ccccacttgttttattacttctactct-caactcccacttct-ttttctcatcatattaaccctcatcacctatcaatcacaataataaataaaattccg 17452144  T
Q  446 tctatttaaccttattaatttaatcaaatagaaattcgggatgttaca 493  Q
    |||||||| ||| ||||||||||| |||||||||||| || |||||||    
T  17452145 tctatttatcctcattaatttaataaaatagaaattcagggtgttaca 17452192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 31344377 - 31344444
Alignment:
Q  235 acgagagtgtttattctgattttctatctctctgtttatactagagaattggactattcacctattat 302  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  31344377 acgagagtgtttattctgattttctatctctctatttataatagagaattgggctattcacctattat 31344444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 17451616 - 17451713
Alignment:
Q  238 agagtgtttattctgattttctatctctctgtttatactagagaattggactattcacctattattaattttcctctcctcaacttaccataatttta 335  Q
    |||||||||||||||||||| |||||| || || ||||||| ||||||| |||||||   |||||||||||||| || |||||||||| |||||||||    
T  17451616 agagtgtttattctgattttatatctcgctattaatactagggaattgggctattcaggaattattaattttcccctactcaacttacaataatttta 17451713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 51334137 - 51334094
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  51334137 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 51334094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 16351243 - 16351200
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  16351243 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 16351200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 19106082 - 19106125
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  19106082 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 19106125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 21830018 - 21830061
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  21830018 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 21830061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 33391673 - 33391630
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  33391673 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 33391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 41355113 - 41355070
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  41355113 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 41355070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 487 - 535
Target Start/End: Complemental strand, 50613060 - 50613012
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacct 535  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  50613060 tgttacaactctccccaacttataagattttcgtcctcgaaaattacct 50613012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 487 - 535
Target Start/End: Complemental strand, 50620888 - 50620840
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacct 535  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  50620888 tgttacaactctccccaacttataagattttcgtcctcgaaaattacct 50620840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 16079277 - 16079234
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  16079277 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 16079234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 540
Target Start/End: Original strand, 20913919 - 20913978
Alignment:
Q  481 tcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||| |||||||||||| | || || |||| ||||||| ||||||||||||||||||||    
T  20913919 tcgggttgttacaactcttcccccctaaaagaattttcgccctcgaaaattacctgaagg 20913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 21836665 - 21836708
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||||| || ||||||||| ||||||||||||||||||||    
T  21836665 gttacaactcccccccacttaaaagattttcgtcctcgaaaatt 21836708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 1e-62; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 238 - 480
Target Start/End: Complemental strand, 22497136 - 22496894
Alignment:
Q  238 agagtgtttattctgattttctatctctctgtttatactagagaattggactattcacctattattaattttcctctcctcaacttaccataattttatt 337  Q
    |||||| ||||| | |||||||||| || | |||| | ||||||||||  ||||||| | |||||||||||| ||||||||||||||||||||||||| |    
T  22497136 agagtggttattataattttctatcactttatttaaagtagagaattgagctattcagcaattattaatttttctctcctcaacttaccataattttact 22497037  T
Q  338 tctttatcccccacttattttattacttctactctgcacctcccacttctattttctaatcatattaatcctcaccacctatcaactatgataataaata 437  Q
    ||||  |||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||   |  ||||||||||    
T  22497036 tcttcctcccccacttattttattacttttactctgcacctcctacttctattttctcatcatattaatcctcatcacctatcagtcacaataataaata 22496937  T
Q  438 aaacttcgtctatttaaccttattaatttaatcaaatagaaat 480  Q
    |||| |||||||||||  || ||||||||||| ||||||||||    
T  22496936 aaacatcgtctatttactctcattaatttaataaaatagaaat 22496894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 9609467 - 9609510
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  9609467 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 9609510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 16924591 - 16924634
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  16924591 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 16924634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 16981483 - 16981526
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  16981483 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 16981526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 16998331 - 16998374
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  16998331 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 16998374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 17063048 - 17063091
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  17063048 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 17063091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 10868181 - 10868224
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  10868181 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 10868224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 21146143 - 21146100
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  21146143 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 21146100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 22325954 - 22325911
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  22325954 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 22325911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 23188339 - 23188382
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  23188339 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 23188382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 23599602 - 23599645
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  23599602 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 23599645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 24261701 - 24261744
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  24261701 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 24261744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 24709364 - 24709407
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  24709364 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 24709407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 24879107 - 24879064
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  24879107 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 24879064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 27217346 - 27217389
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  27217346 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 27217389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 27370600 - 27370643
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  27370600 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 27370643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 41609456 - 41609413
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  41609456 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 41609413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 44380011 - 44379968
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  44380011 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 44379968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 44386681 - 44386638
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  44386681 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 44386638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 23209065 - 23209012
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||  |||||||    
T  23209065 tgttacaactctcctcgacttaaagaatttttgtcctcgaaaattgactgaagg 23209012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 27385822 - 27385779
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  27385822 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 27385779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 526
Target Start/End: Original strand, 12830372 - 12830410
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcga 526  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  12830372 gttacaactctcccccacttaaaagattttcgtcctcga 12830410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 23086780 - 23086822
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  23086780 gttacaactctccccaacttaaagaattttcgtcctcgaaaat 23086822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 28350554 - 28350596
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  28350554 gttacaactctccccaacttaaagaattttcgtcctcgaaaat 28350596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 1e-56; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 242 - 422
Target Start/End: Original strand, 29484092 - 29484271
Alignment:
Q  242 tgtttattctgattttctatctctctgtttatactagagaattggactattcacctattattaattttcctctcctcaacttaccataattttatttctt 341  Q
    |||||||||||||||||||||||||| |||||||||||  ||||| |||||||| |||||||| |||||||||| |||||||||||||| |||| |||||    
T  29484092 tgtttattctgattttctatctctctatttatactagattattgggctattcacgtattatta-ttttcctctcttcaacttaccataactttacttctt 29484190  T
Q  342 tatcccccacttattttattacttctactctgcacctcccacttctattttctaatcatattaatcctcaccacctatcaa 422  Q
      | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||    
T  29484191 ctttccccacttattttattacttctactctgcacctcccacttctattttctcatcatactaatccgcatcacctatcaa 29484271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 20316225 - 20316359
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatag 108  Q
    |||||||||||||| |||| ||||||||| |||||| |||||||||||||||| |||||||||||| || ||||||||||||||||||| ||||||||||    
T  20316225 acatcatcatcatgtaccttcatcgttatgttctcagcgaaattcacatcataacaacattaacatctaaagagttcaaacaacccccaacatagaatag 20316324  T
Q  109 ataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||| |||||||  |||||||||||||||||    
T  20316325 ataccctagagtgaaataaatctcccccttacctc 20316359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 29483869 - 29484003
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaa-cccccatcatagaat- 106  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||||||||| |||||||||||  || || | | |||||| |||||||||||||||     
T  29483869 acatcatcatcatgcaccttcatcgttgttttctgatcgaaattcacatcataacaacattaacaactaaagggctaaaacaaccccccatcatagaata 29483968  T
Q  107 agataccctaaagtgaaaggaatctcccccttacctc 143  Q
    || |||| ||||||||||| ||  |||||||||||||    
T  29483969 aggtaccataaagtgaaagcaa--tcccccttacctc 29484003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 362 - 422
Target Start/End: Complemental strand, 24143397 - 24143337
Alignment:
Q  362 acttctactctgcacctcccacttctattttctaatcatattaatcctcaccacctatcaa 422  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  24143397 acttctactatgcacttcccacttctattttctcatcatattaatcatcaccacctatcaa 24143337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 16356134 - 16356177
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  16356134 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 16356177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 27518039 - 27518082
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  27518039 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 27518082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 34566126 - 34566169
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  34566126 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 34566169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 40708412 - 40708455
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40708412 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 40708455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 490 - 539
Target Start/End: Original strand, 22472870 - 22472919
Alignment:
Q  490 tacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaag 539  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  22472870 tacaactctcccccacttaaagaattttcgtccttgaaaattacctgaag 22472919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 15000493 - 15000450
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  15000493 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 15000450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 19769592 - 19769635
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  19769592 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 19769635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 22333641 - 22333598
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  22333641 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 22333598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 22344738 - 22344781
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  22344738 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 22344781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 24565118 - 24565157
Alignment:
Q  238 agagtgtttattctgattttctatctctctgtttatacta 277  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  24565118 agagtgtttattctgattttctatctctctatttatacta 24565157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 24606153 - 24606192
Alignment:
Q  238 agagtgtttattctgattttctatctctctgtttatacta 277  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  24606153 agagtgtttattctgattttctatctctctatttatacta 24606192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 27609986 - 27610029
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  27609986 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 27610029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 27669244 - 27669201
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  27669244 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 27669201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 535
Target Start/End: Complemental strand, 27686153 - 27686106
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaattacct 535  Q
    ||||||||||||| || |||||| ||||||||||||||||||||||||    
T  27686153 gttacaactctccccctcttaaaagattttcgtcctcgaaaattacct 27686106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 29476827 - 29476784
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  29476827 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 29476784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 41770474 - 41770517
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  41770474 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 41770517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 23669594 - 23669636
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||||||||||||||||||||||    
T  23669594 gttacaactctccccaacttaaaggattttcgtcctcgaaaat 23669636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 540
Target Start/End: Complemental strand, 16066451 - 16066388
Alignment:
Q  476 gaaattcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    |||| ||||| |||||||||||||| ||  |||||| |||||||||||||||||||||| |||||    
T  16066451 gaaaatcggggtgttacaactctccccct-ttaaagaattttcgtcctcgaaaattacccgaagg 16066388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 24143775 - 24143735
Alignment:
Q  238 agagtgtttattctgattttctatctctctgtttatactag 278  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  24143775 agagtgtttattcttattttctatctctctatttatactag 24143735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 18775409 - 18775452
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||    
T  18775409 gttacaactctcccccacttaaaagattttcgtcttcgaaaatt 18775452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 22134300 - 22134343
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||    
T  22134300 gttacaactctcccccacttaaaagattttcatcctcgaaaatt 22134343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 447 - 493
Target Start/End: Original strand, 29484352 - 29484398
Alignment:
Q  447 ctatttaaccttattaatttaatcaaatagaaattcgggatgttaca 493  Q
    ||||||||| | ||||||||||| ||||||||||||||| |||||||    
T  29484352 ctatttaacatcattaatttaataaaatagaaattcggggtgttaca 29484398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 24580829 - 24580878
Alignment:
Q  491 acaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    |||||||||| || || |||| ||||||| ||||||||||||||||||||    
T  24580829 acaactctccccccctaaaagaattttcgccctcgaaaattacctgaagg 24580878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 6e-49; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 25784339 - 25784208
Alignment:
Q  12 tcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatagata 111  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||| |||||||||| ||||||||    
T  25784339 tcatcatcatgtaccttcatcgttattttctcatcgaaattcacatcataacaactttaacatctaaagagttcaaacaatccccatcataaaatagata 25784240  T
Q  112 ccctaaagtgaaaggaatctcccccttacctc 143  Q
    ||||||||||||||||||||||||||||||||    
T  25784239 ccctaaagtgaaaggaatctcccccttacctc 25784208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 21028773 - 21028907
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatag 108  Q
    |||||||||||||  || | ||||||||||||||||||| |||||||||||||  ||||||||||| || ||||||||||||||||||| ||||||||||    
T  21028773 acatcatcatcatatactttcatcgttattttctcatcgtaattcacatcataataacattaacatctaaagagttcaaacaacccccaacatagaatag 21028872  T
Q  109 ataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||||||||||||||||||||||||    
T  21028873 ataccctaaagtgaaaggaatctcccccttacctc 21028907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 389 - 493
Target Start/End: Complemental strand, 16221542 - 16221439
Alignment:
Q  389 ttttctaatcatattaatcctcaccacctatcaactatgataataaataaaacttcgtctatttaaccttattaatttaatcaaatagaaattcgggatg 488  Q
    |||||| |||||||||||||||| ||||||||||  |  ||||||||||||||||| |||||||| ||| ||||||||||| ||| ||||||||||||||    
T  16221542 ttttctcatcatattaatcctcatcacctatcaatcacaataataaataaaacttcatctatttaccctcattaatttaat-aaaaagaaattcgggatg 16221444  T
Q  489 ttaca 493  Q
    |||||    
T  16221443 ttaca 16221439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 14057350 - 14057267
Alignment:
Q  447 ctatttaaccttattaatttaatcaaatagaaattcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||| |  || ||||| ||||||||||| ||| |||||||||| ||| |||||||||| ||||||||||||||||||    
T  14057350 ctatttaacctcacaaaattaattaaatagaaatttggggtgttacaactatcccccacttaaagaattttcgtcctcgaaaat 14057267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 16635092 - 16635135
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  16635092 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 16635135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 43162416 - 43162459
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  43162416 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 43162459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 48424766 - 48424809
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  48424766 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 48424809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 531
Target Start/End: Complemental strand, 16757397 - 16757353
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  16757397 tgttacaactctcccccacttaaaagattttcgtcctcgaaaatt 16757353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 6600066 - 6600109
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  6600066 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 6600109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 6609779 - 6609822
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  6609779 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 6609822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 10004919 - 10004962
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  10004919 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 10004962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 10905529 - 10905572
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  10905529 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 10905572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 13252009 - 13252052
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  13252009 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 13252052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 15349056 - 15349013
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  15349056 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 15349013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 15403321 - 15403278
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  15403321 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 15403278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 15725744 - 15725701
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  15725744 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 15725701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 487 - 531
Target Start/End: Complemental strand, 13028809 - 13028765
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||||||||| ||||||| || |||||||||||||||||||    
T  13028809 tgttacaactctcccccacttatagaattttcgtcctcgaaaatt 13028765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 13512133 - 13512185
Alignment:
Q  91 acccccatcatagaatagataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||| || | |||||||||||  ||||||||||||||||||||    
T  13512133 acccccatcatagattaaacaccctaaagtggtaggaatctcccccttacctc 13512185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 1981681 - 1981638
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  1981681 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 1981638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 11297334 - 11297291
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  11297334 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 11297291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 12497567 - 12497610
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  12497567 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 12497610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 15338588 - 15338631
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||    
T  15338588 gttacaactctctcccacttaaaagattttcgtcctcgaaaatt 15338631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 15590203 - 15590160
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  15590203 gttacaactctcccccacttaaaagatcttcgtcctcgaaaatt 15590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 16691479 - 16691522
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||    
T  16691479 gttacaactctcccccacttaaaagattttcatcctcgaaaatt 16691522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 20062865 - 20062822
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||    
T  20062865 gttacaactctcccccacttaaaagattttcgtactcgaaaatt 20062822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 26793210 - 26793167
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||    
T  26793210 gttacaactctcccccacttaaaagattttcttcctcgaaaatt 26793167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 12159353 - 12159403
Alignment:
Q  93 ccccatcatagaatagataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||| || | |||||||||||  ||||||||||||||||||||    
T  12159353 ccccatcatagattaaacaccctaaagtggtaggaatctcccccttacctc 12159403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 15009033 - 15008991
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  15009033 gttacaactctccccaacttaaagaattttcgtcctcgaaaat 15008991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 19444982 - 19445024
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  19444982 gttacaactctccccaacttaaagaattttcgtcctcgaaaat 19445024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 2e-45; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 18321204 - 18321071
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatag 108  Q
    |||||||||||||| |||| |||||||||||||| ||| |||||||||||||| |||||||||||| || |||||||||||||||| ||||||| |||||    
T  18321204 acatcatcatcatgtaccttcatcgttattttctaatcaaaattcacatcataacaacattaacatctaaagagttcaaacaacccacatcataaaatag 18321105  T
Q  109 ataccctaaagtgaaaggaatctcccccttacct 142  Q
    ||||||||| ||||||||||||||||||||||||    
T  18321104 ataccctaatgtgaaaggaatctcccccttacct 18321071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 18453741 - 18453874
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatag 108  Q
    |||||||||||||| |||| |||||||||||||| ||| |||||||||||||| |||||||||||| || |||||||||||||||| ||||||| |||||    
T  18453741 acatcatcatcatgtaccttcatcgttattttctaatcaaaattcacatcataacaacattaacatctaaagagttcaaacaacccacatcataaaatag 18453840  T
Q  109 ataccctaaagtgaaaggaatctcccccttacct 142  Q
    ||||||||| ||||||||||||||||||||||||    
T  18453841 ataccctaatgtgaaaggaatctcccccttacct 18453874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 540
Target Start/End: Complemental strand, 9851464 - 9851405
Alignment:
Q  481 tcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    |||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  9851464 tcgggatgttacaactctcccccacataaagaattttcgccctcgaaaattacctgaagg 9851405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 18296905 - 18296948
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  18296905 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 18296948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 29039716 - 29039673
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  29039716 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 29039673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 12370512 - 12370565
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  12370512 tgttacaactctccctcacttatagaattttcgtcctcgaaaattacctgaagg 12370565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 493
Target Start/End: Original strand, 18942274 - 18942330
Alignment:
Q  437 aaaacttcgtctatttaaccttattaatttaatcaaatagaaattcgggatgttaca 493  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||| ||| |||||||    
T  18942274 aaaagttcgtctatttaacattattaatttaataaaatagaaatttggggtgttaca 18942330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 8053935 - 8053892
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  8053935 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 8053892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 8386112 - 8386155
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  8386112 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 8386155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 14304289 - 14304246
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  14304289 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 14304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 15364086 - 15364129
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  15364086 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 15364129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 18227758 - 18227715
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  18227758 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 18227715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 23955447 - 23955490
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  23955447 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 23955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 27711036 - 27711079
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  27711036 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 27711079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 40472740 - 40472783
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  40472740 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 40472783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 540
Target Start/End: Complemental strand, 12132991 - 12132928
Alignment:
Q  476 gaaattcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    |||| ||||| |||||||||||||| || || |||| ||||||| ||||||||||||||||||||    
T  12132991 gaaaatcgggttgttacaactctcc-ccgctaaaagaattttcgccctcgaaaattacctgaagg 12132928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 491 - 531
Target Start/End: Complemental strand, 14267208 - 14267168
Alignment:
Q  491 acaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  14267208 acaactctcccccacttaaaagattttcgtcctcgaaaatt 14267168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 708 - 796
Target Start/End: Original strand, 14449934 - 14450022
Alignment:
Q  708 ctcaacccatattatcatcctaccctgctaagtaccaatatcaagctcgtgcctcttaatccttcaacttataactagcacccatctaa 796  Q
    |||||||||||  || |||||| ||||||||| ||||||| ||| | | ||  || |||||||| ||||||||||||||||| ||||||    
T  14449934 ctcaacccatacgataatcctaacctgctaagcaccaataccaaacccatggatcctaatcctttaacttataactagcaccaatctaa 14450022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 12523376 - 12523419
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||    
T  12523376 gttaaaactctcccccacttaaaagattttcgtcctcgaaaatt 12523419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 14680267 - 14680310
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||    
T  14680267 gttacaactctcccccacttaaaagattttcgtccacgaaaatt 14680310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 19779105 - 19779062
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||    
T  19779105 gttacaactctcccccacttaaaagattttcatcctcgaaaatt 19779062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 540
Target Start/End: Complemental strand, 55375937 - 55375878
Alignment:
Q  481 tcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||| |||||||||||||| ||    |||| ||||||||||||||||||||||||||||    
T  55375937 tcggggtgttacaactctcccccctaaaaagaattttcgtcctcgaaaattacctgaagg 55375878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 489 - 531
Target Start/End: Original strand, 12476301 - 12476343
Alignment:
Q  489 ttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||    
T  12476301 ttacaactctcccccacttaaaagattttcgtcctcaaaaatt 12476343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 497 - 539
Target Start/End: Original strand, 16684964 - 16685006
Alignment:
Q  497 ctcctccacttaaaggattttcgtcctcgaaaattacctgaag 539  Q
    |||| ||||| |||| |||||||||||||||||||||||||||    
T  16684964 ctcccccactaaaagaattttcgtcctcgaaaattacctgaag 16685006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 480 - 540
Target Start/End: Complemental strand, 18550641 - 18550579
Alignment:
Q  480 ttcgggatgttacaactctcctccacttaaagga-ttttcgtcctcgaaaa-ttacctgaagg 540  Q
    |||||| |||||||||||||| |||||||||  | |||||||||||||||| |||||||||||    
T  18550641 ttcggggtgttacaactctcccccacttaaacaatttttcgtcctcgaaaatttacctgaagg 18550579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 30275231 - 30275173
Alignment:
Q  86 aaacaacccccatcatagaata-gataccctaaagtgaaaggaatctcccccttacctc 143  Q
    ||||||||||| |||||||||| | ||||||||||||||| || |||||| ||||||||    
T  30275231 aaacaacccccgtcatagaataagttaccctaaagtgaaatgattctcccacttacctc 30275173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 489 - 530
Target Start/End: Original strand, 13879158 - 13879199
Alignment:
Q  489 ttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    |||||||||||| | |||||||| ||||||||||||||||||    
T  13879158 ttacaactctccccaacttaaagaattttcgtcctcgaaaat 13879199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 2e-36; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 19862264 - 19862398
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatag 108  Q
    ||||||||||| |  |||| |||| | ||||| |||||||||||||||||||| |||||||||||| || |||||| ||||||||||||||| | ||| |    
T  19862264 acatcatcatcgtataccttcatcatcattttgtcatcgaaattcacatcataacaacattaacatctaaagagtttaaacaacccccatcaaataattg 19862363  T
Q  109 ataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||||||||||||||||||||||||    
T  19862364 ataccctaaagtgaaaggaatctcccccttacctc 19862398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 19866901 - 19867035
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatag 108  Q
    ||||||||||| |  |||| |||| | ||||| |||||||||||||||||||| |||||||||||| || |||||| ||||||||||||||| | ||| |    
T  19866901 acatcatcatcgtataccttcatcatcattttgtcatcgaaattcacatcataacaacattaacatctaaagagtttaaacaacccccatcaaataattg 19867000  T
Q  109 ataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||||||||||||||||||||||||    
T  19867001 ataccctaaagtgaaaggaatctcccccttacctc 19867035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 24678408 - 24678276
Alignment:
Q  11 atcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttataga-gttcaaacaacccccatcatagaataga 109  Q
    |||||| ||| | |||| ||||||||||||||| | ||||||||||||||| ||||||||||||  ||||| |||| |||||||||  ||||||||||||    
T  24678408 atcatcttcaagtaccttcatcgttattttctccttgaaattcacatcataacaacattaacatc-atagaagttccaacaaccccattcatagaataga 24678310  T
Q  110 taccctaaagtgaaaggaatctcccccttacctc 143  Q
    ||||||||||||||||||||||||||||| ||||    
T  24678309 taccctaaagtgaaaggaatctcccccttgcctc 24678276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 24818631 - 24818579
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaag 539  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  24818631 tgttacaactctcccccacttaaagaattttcgtcctcgaaaattacctgaag 24818579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 480 - 540
Target Start/End: Original strand, 23452007 - 23452067
Alignment:
Q  480 ttcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||||  |||||||    
T  23452007 ttcggggtgttacaactctcccccacttaaagaattttcgtcctcgaaaattgactgaagg 23452067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 19112456 - 19112499
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  19112456 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 19112499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 540
Target Start/End: Original strand, 19862812 - 19862876
Alignment:
Q  477 aaattcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaa-ttacctgaagg 540  Q
    ||||||||| |||||||||||||| |||||||||  ||||| ||||||||||| |||||||||||    
T  19862812 aaattcggggtgttacaactctcccccacttaaacaatttttgtcctcgaaaatttacctgaagg 19862876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 540
Target Start/End: Original strand, 19867449 - 19867513
Alignment:
Q  477 aaattcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaa-ttacctgaagg 540  Q
    ||||||||| |||||||||||||| |||||||||  ||||| ||||||||||| |||||||||||    
T  19867449 aaattcggggtgttacaactctcccccacttaaacaatttttgtcctcgaaaatttacctgaagg 19867513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 17675038 - 17674995
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  17675038 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 17674995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 20018765 - 20018722
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  20018765 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 20018722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 481 - 540
Target Start/End: Complemental strand, 20653354 - 20653295
Alignment:
Q  481 tcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||| |||||||||||||| || || |||| ||||||| ||||||||||||||||||||    
T  20653354 tcgggctgttacaactctccccccctaaaagaattttcgccctcgaaaattacctgaagg 20653295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 22121189 - 22121146
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  22121189 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 22121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 22134056 - 22134013
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  22134056 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 22134013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 30314159 - 30314116
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  30314159 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 30314116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 32599910 - 32599953
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  32599910 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 32599953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 447 - 532
Target Start/End: Complemental strand, 10453705 - 10453619
Alignment:
Q  447 ctatttaaccttattaatttaatcaaatagaaattcgggatgttacaactctcctccacttaaagga-ttttcgtcctcgaaaatta 532  Q
    ||||||||||| |  || ||||| ||||| ||||| ||| |||||||||||||| |||||||||  | |||||||||||||||||||    
T  10453705 ctatttaacctcacaaaattaattaaataaaaatttggggtgttacaactctcccccacttaaataatttttcgtcctcgaaaatta 10453619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 23451539 - 23451591
Alignment:
Q  91 acccccatcatagaatagataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||| || | |||||||||||  ||||||||||||||||||||    
T  23451539 acccccatcatagattaaacaccctaaagtggtaggaatctcccccttacctc 23451591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 24496670 - 24496722
Alignment:
Q  91 acccccatcatagaatagataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||| || | |||||||||||  ||||||||||||||||||||    
T  24496670 acccccatcatagattaaacaccctaaagtggtaggaatctcccccttacctc 24496722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 16409060 - 16409017
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  16409060 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 16409017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 531
Target Start/End: Complemental strand, 19485881 - 19485842
Alignment:
Q  492 caactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  19485881 caactctcccccacttaaaagattttcgtcctcgaaaatt 19485842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 22046140 - 22046183
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  22046140 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 22046183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 3274280 - 3274322
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| ||||||| || ||||||||||||||||||    
T  3274280 gttacaactctcccccacttatagaattttcgtcctcgaaaat 3274322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 489 - 531
Target Start/End: Original strand, 15440948 - 15440990
Alignment:
Q  489 ttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||||||| |||||||||  |||||||||||||||||||    
T  15440948 ttacaactctcccccacttaaaatattttcgtcctcgaaaatt 15440990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 489 - 531
Target Start/End: Original strand, 15533147 - 15533189
Alignment:
Q  489 ttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||||||| |||||||||  |||||||||||||||||||    
T  15533147 ttacaactctcccccacttaaaatattttcgtcctcgaaaatt 15533189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 15727823 - 15727873
Alignment:
Q  94 cccatcatagaata-gataccctaaagtgaaaggaatctcccccttacctc 143  Q
    ||||||||||| || |||||||||||||| ||||| |||||||||||||||    
T  15727823 cccatcatagattaagataccctaaagtgtaaggattctcccccttacctc 15727873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 34302617 - 34302666
Alignment:
Q  92 cccccatcatagaatagataccctaaagtgaaaggaatctcccccttacc 141  Q
    ||||||||||||| || | |||||||||||  ||||||||||||||||||    
T  34302617 cccccatcatagattaaacaccctaaagtggtaggaatctcccccttacc 34302666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 75; Significance: 5e-34; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 139218 - 139084
Alignment:
Q  9 acatcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatag 108  Q
    ||||||||||| |  |||| |||| | ||||| |||||||||||||||||||| |||||||||||| || |||||| ||||||||||||||| | ||| |    
T  139218 acatcatcatcgtataccttcatcatcattttgtcatcgaaattcacatcataacaacattaacatctaaagagtttaaacaacccccatcaaataattg 139119  T
Q  109 ataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||||||||||||| ||||||||||    
T  139118 ataccctaaagtgaaaggaatctctcccttacctc 139084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 481 - 540
Target Start/End: Original strand, 172693 - 172752
Alignment:
Q  481 tcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||| |||||||||||||| || || |||| ||||||| ||||||||||||||||||||    
T  172693 tcgggttgttacaactctccccccctaaaagaattttcgccctcgaaaattacctgaagg 172752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 481 - 540
Target Start/End: Original strand, 178396 - 178455
Alignment:
Q  481 tcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||| |||||||||||||| || || |||| ||||||| ||||||||||||||||||||    
T  178396 tcgggttgttacaactctccccccctaaaagaattttcgccctcgaaaattacctgaagg 178455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 15510 - 15403
Alignment:
Q  36 attttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatagataccctaaagtgaaaggaatctcccc 135  Q
    ||||| |||||||||||||||||||| |||||||||||| || |||||| |||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  15510 attttgtcatcgaaattcacatcataacaacattaacatctaaagagtttaaacaacccccaacaaataattgataccctaaagtgaaaggaatctcccc 15411  T
Q  136 cttacctc 143  Q
    ||||||||    
T  15410 cttacctc 15403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 11356 - 11224
Alignment:
Q  11 atcatcatcatgcacctacatcgttattttctcatcgaaattcacatcatatcaacattaacatttatagagttcaaacaacccccatcatagaatagat 110  Q
    ||||||||| |  |||| |||| | ||||| |||||||||||||||||||| |||||||||||| || |||||| ||||||||||||||| | |||  ||    
T  11356 atcatcatcgtataccttcatcatcattttgtcatcgaaattcacatcataacaacattaacatctaaagagtttaaacaacccccatcaaataattcat 11257  T
Q  111 accctaaagtgaaaggaatctcccccttacctc 143  Q
    ||||||||||||| |||||||||||||||||||    
T  11256 accctaaagtgaatggaatctcccccttacctc 11224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 220 - 132
Alignment:
Q  55 catcatatcaacattaacatttatagagttcaaacaacccccatcatagaatagataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||  ||||||||||| || | | ||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  220 catcatacgaacattaacatctaaatatttcaaacaacccccaacatataatagttaccctaaaatgaaaggaatctcccccttacctc 132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 10454 - 10366
Alignment:
Q  55 catcatatcaacattaacatttatagagttcaaacaacccccatcatagaatagataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||  ||||||||||| || | | ||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  10454 catcatacgaacattaacatctaaatatttcaaacaacccccaacatataatagttaccctaaaatgaaaggaatctcccccttacctc 10366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 6e-18; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 449 - 540
Target Start/End: Original strand, 5764116 - 5764207
Alignment:
Q  449 atttaaccttattaatttaatcaaatagaaattcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||||||||||||| ||||| |||||| |||||||| | ||| ||||||||| ||||||||  ||||| | ||||||||||||||||||||    
T  5764116 atttaaccttattaaattaattaaatagtaattcggggttttataactctccttcacttaaataattttagccctcgaaaattacctgaagg 5764207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 8198317 - 8198360
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  8198317 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 8198360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 8707294 - 8707337
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  8707294 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 8707337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 10870684 - 10870727
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  10870684 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 10870727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 11553683 - 11553640
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  11553683 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 11553640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 12687190 - 12687233
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  12687190 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 12687233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 14332086 - 14332129
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  14332086 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 14332129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 18177431 - 18177474
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  18177431 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 18177474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 18552339 - 18552296
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  18552339 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 18552296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 23517350 - 23517307
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  23517350 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 23517307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 44791932 - 44791889
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  44791932 gttacaactctcccccacttaaaggactttcgtcctcgaaaatt 44791889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 531
Target Start/End: Complemental strand, 11237790 - 11237751
Alignment:
Q  492 caactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  11237790 caactctcccccacttaaaagattttcgtcctcgaaaatt 11237751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 13685752 - 13685795
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| || |||||| ||||||||||||||||||||    
T  13685752 gttacaactctccccctcttaaaagattttcgtcctcgaaaatt 13685795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 15161638 - 15161595
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| || |||||| ||||||||||||||||||||    
T  15161638 gttacaactctccccctcttaaaagattttcgtcctcgaaaatt 15161595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 493 - 531
Target Start/End: Complemental strand, 17892 - 17854
Alignment:
Q  493 aactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  17892 aactctcccccacttaaaagattttcgtcctcgaaaatt 17854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 1493618 - 1493576
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  1493618 gttacaactctccccaacttaaagaattttcgtcctcgaaaat 1493576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 487 - 537
Target Start/End: Original strand, 11316115 - 11316165
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctga 537  Q
    |||||||||||| | |||||||||| ||||| ||||||| |||||||||||    
T  11316115 tgttacaactcttccccacttaaagaattttagtcctcggaaattacctga 11316165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 15114238 - 15114280
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  15114238 gttacaactctccccaacttaaagaattttcgtcctcgaaaat 15114280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 16928933 - 16928891
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  16928933 gttacaactctccccaacttaaagaattttcgtcctcgaaaat 16928891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 18450482 - 18450444
Alignment:
Q  107 agataccctaaagtgaaaggaatctcccccttacctcaa 145  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  18450482 agataccctaaagggaaaggattctcccccttacctcaa 18450444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 21675113 - 21675061
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    |||||||||||||| || || |||| ||||||| ||||||||||||||||||||    
T  21675113 tgttacaactctccccc-ctaaaagaattttcgccctcgaaaattacctgaagg 21675061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 487 - 537
Target Start/End: Complemental strand, 19566295 - 19566245
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctga 537  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  19566295 tgttacaactctcccccacttaaagaattttcgtcctcgaaaattacctga 19566245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 29592637 - 29592594
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  29592637 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 29592594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 2875520 - 2875477
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  2875520 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 2875477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 12497590 - 12497633
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  12497590 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 12497633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 16550878 - 16550835
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  16550878 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 16550835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 16627434 - 16627391
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  16627434 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 16627391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 17032126 - 17032169
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  17032126 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 17032169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 18932376 - 18932419
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  18932376 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 18932419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 24313885 - 24313842
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  24313885 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 24313842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 25112116 - 25112159
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  25112116 gttacaactcttctccacttaaaagattttcgtcctcgaaaatt 25112159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 27187000 - 27187043
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  27187000 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 27187043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 27262240 - 27262197
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  27262240 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 27262197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 28263914 - 28263871
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  28263914 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 28263871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 28342663 - 28342620
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  28342663 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 28342620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 26588160 - 26588210
Alignment:
Q  94 cccatcatagaata-gataccctaaagtgaaaggaatctcccccttacctc 143  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  26588160 cccatcatagattaagataccctaaagtgaaaggaacctcccccttacctc 26588210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 1537714 - 1537671
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  1537714 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 1537671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 1543801 - 1543758
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  1543801 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 1543758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 16964084 - 16964041
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  16964084 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 16964041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 18838624 - 18838571
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||||| |||||| || || |||| ||||||| ||||||||||||||||||||    
T  18838624 tgttacacctctccccccctaaaagaattttcgccctcgaaaattacctgaagg 18838571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 26587840 - 26587893
Alignment:
Q  91 acccccatcatagaata-gataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||| || ||||||||||||||||| || ||||||| |||||||    
T  26587840 acccccatcatagattaagataccctaaagtgaaaagattctcccctttacctc 26587893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 477 - 540
Target Start/End: Complemental strand, 35062 - 34999
Alignment:
Q  477 aaattcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||||||| |||||||||||||| |||||||||  |||||||||||||||||||  |||||||    
T  35062 aaattcggggtgttacaactctcccccacttaaacaattttcgtcctcgaaaatttactgaagg 34999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 35526 - 35474
Alignment:
Q  91 acccccatcatagaatagataccctaaagtgaaaggaatctcccccttacctc 143  Q
    |||||||||||||| || |||||||||||||  ||||||||||||||||||||    
T  35526 acccccatcatagattaaataccctaaagtggtaggaatctcccccttacctc 35474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 11648 - 11691
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  11648 gttacaactctcccccacttaaaggattttcgtcctcgaaaatt 11691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 6669 - 6712
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  6669 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 6712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 7108 - 7151
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  7108 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 7684 - 7641
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  7684 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 7641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 34148 - 34105
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  34148 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 34105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 42885 - 42928
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  42885 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 42928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 62020 - 62063
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  62020 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 62063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 8216 - 8259
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||    
T  8216 gttacaactctcccccaattaaaagattttcgtcctcgaaaatt 8259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 108193 - 108244
Alignment:
Q  484 ggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacct 535  Q
    ||||||||||||||||| | |||||||| ||||||| |||||||||||||||    
T  108193 ggatgttacaactctccccaacttaaagaattttcgccctcgaaaattacct 108244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 308390 - 308433
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  308390 gttacaactctcccccacttaaaagattttcgtcctcgaaaatt 308433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 370687 - 370634
Alignment:
Q  487 tgttacaactctcctccacttaaagga-ttttcgtcctcgaaaattacctgaag 539  Q
    |||||||||||||| ||||| ||| || ||||||||||||||||||||||||||    
T  370687 tgttacaactctcccccactaaaaagaattttcgtcctcgaaaattacctgaag 370634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 487 - 535
Target Start/End: Original strand, 6830 - 6878
Alignment:
Q  487 tgttacaactctcctccacttaaaggattttcgtcctcgaaaattacct 535  Q
    |||||||||||||| |||||||||| ||||| | |||||||||||||||    
T  6830 tgttacaactctcccccacttaaagaatttttgccctcgaaaattacct 6878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 407 - 450
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  407 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 540
Target Start/End: Original strand, 2842 - 2900
Alignment:
Q  481 tcgggatgttacaactctcctccacttaaaggattttcgtcctcgaaaattacctgaagg 540  Q
    ||||| |||||||||||||| || || |||| ||||||| ||||||||||||||||||||    
T  2842 tcgggctgttacaactctccccc-ctaaaagaattttcgccctcgaaaattacctgaagg 2900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 145 - 188
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||    
T  145 gttacaactctcccccatttaaaagattttcgtcctcgaaaatt 188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 351 - 394
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||    
T  351 gttacaaccctcccccacttaaaagattttcgtcctcgaaaatt 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 14091 - 14134
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  14091 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 14134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 124919 - 124876
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||    
T  124919 gttacaactctcccccacttaaaagattttcgtcctcaaaaatt 124876  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 179948 - 179991
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  179948 gttacaactctccccaacttaaaagattttcgtcctcgaaaatt 179991  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 36920 - 36877
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaatt 531  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||    
T  36920 gttacaactctccccaacttataggattttcgtcctcgaaaatt 36877  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 2896 - 2938
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  2896 gttacaactctccccaacttaaagaattttcgtcctcgaaaat 2938  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 29345 - 29303
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  29345 gttacaactctccgcaacttaaagaattttcgtcctcgaaaat 29303  T

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Target: scaffold0064; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 41336 - 41294
Alignment:
Q  488 gttacaactctcctccacttaaaggattttcgtcctcgaaaat 530  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  41336 gttacaactctccgcaacttaaagaattttcgtcctcgaaaat 41294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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