View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13305_low_15 (Length: 344)
Name: NF13305_low_15
Description: NF13305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13305_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 6380872 - 6381182
Alignment:
| Q |
21 |
caattagccaaatataaggnnnnnnncaagagtagcgataatcccacttccaaacgatagttatttatcatttgacgattctaagatgggagacatccag |
120 |
Q |
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| T |
6380872 |
caattagccaaatataaggaaaaaaacaagagtagcgataatcccacttccagacgatagttatttatcattcgacgattctaagatgggagacatccag |
6380971 |
T |
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| Q |
121 |
cacatcaccttatgaggctatggaaggctcataacatggaagaggtgcccttcgatcggctccgattagcgaatccagctgtattttacattaaaaaatt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6380972 |
cacatcaccttatgaggctatggaaggctcataacatggaagaggtgcccttcgatcggctccgattagcgaatccagctgtattttacattaaaaaatt |
6381071 |
T |
|
| Q |
221 |
tatcctcaatgctttgaaggacaaccagttctcctggaattaaggactcagaagactgcatggaacatctaacacatttcttggaggcttgcaacactca |
320 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6381072 |
tatcctcaatgctttgaaggacaaccagttctccgggaattaaggactcagaagactgcatggaacatctaacacatttcttggaggcttgcaacactca |
6381171 |
T |
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| Q |
321 |
aaaccctgatg |
331 |
Q |
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||||||||||| |
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| T |
6381172 |
aaaccctgatg |
6381182 |
T |
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