View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13305_low_20 (Length: 284)
Name: NF13305_low_20
Description: NF13305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13305_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 18 - 278
Target Start/End: Original strand, 21721323 - 21721584
Alignment:
| Q |
18 |
acttctggtatagtatagttagaggaagcaattttgataagaaaataaaactagctagcacgcagaagaaacacttgcatgagaaattttgaataaaaat |
117 |
Q |
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| T |
21721323 |
acttctggtatagtatagttagaggaagcaattttcataagaaaataaaactagctagcccgcagaagaaacacttgcatgagaaattttgaataaaaat |
21721422 |
T |
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| Q |
118 |
taggtagacattagacaagttaattaatagtcaaaagggcaagaa-gctattggaagataatttgtgtccaaataagaagatatattatggggcatgcca |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21721423 |
taggtagacattagacaagttaattaatagtcaaaagggcaagaaggcaattggaagataatttgtgtccaaataagaagatatattatggggcatgcca |
21721522 |
T |
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| Q |
217 |
attcacaaattgcaaagacaaaagaaaacacgttccaaggagttgaattccctttcttctca |
278 |
Q |
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| T |
21721523 |
attcacaaattgcaaagacaaaagaaaacacgttccaatgagttgaattccctttcttctca |
21721584 |
T |
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