View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13305_low_5 (Length: 617)

Name: NF13305_low_5
Description: NF13305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13305_low_5
NF13305_low_5
[»] chr2 (40 HSPs)
chr2 (209-596)||(15890443-15890826)
chr2 (19-177)||(15890253-15890411)
chr2 (439-509)||(36449707-36449777)
chr2 (475-519)||(7939993-7940037)
chr2 (475-526)||(1366405-1366456)
chr2 (475-558)||(33476517-33476600)
chr2 (475-558)||(37199560-37199643)
chr2 (475-516)||(40947462-40947503)
chr2 (478-519)||(41078158-41078199)
chr2 (475-558)||(7939357-7939440)
chr2 (439-514)||(22298255-22298330)
chr2 (475-516)||(26196237-26196278)
chr2 (475-519)||(10357120-10357164)
chr2 (475-519)||(11051589-11051633)
chr2 (475-519)||(44332382-44332426)
chr2 (475-518)||(3044958-3045001)
chr2 (495-558)||(3045559-3045622)
chr2 (475-526)||(6229877-6229928)
chr2 (475-514)||(13873990-13874029)
chr2 (475-514)||(14014115-14014154)
chr2 (475-526)||(31597255-31597306)
chr2 (475-526)||(33146065-33146116)
chr2 (475-526)||(34173706-34173757)
chr2 (464-519)||(35175642-35175696)
chr2 (475-526)||(37009652-37009703)
chr2 (475-513)||(38910705-38910743)
chr2 (433-519)||(40768822-40768908)
chr2 (482-519)||(41521667-41521704)
chr2 (475-519)||(3515472-3515516)
chr2 (475-511)||(5475141-5475177)
chr2 (475-515)||(8313686-8313726)
chr2 (475-519)||(11796170-11796214)
chr2 (495-523)||(17449771-17449799)
chr2 (475-519)||(17829081-17829125)
chr2 (475-519)||(20894280-20894324)
chr2 (475-519)||(34173076-34173120)
chr2 (469-513)||(34579649-34579693)
chr2 (469-513)||(34585398-34585442)
chr2 (475-519)||(35899168-35899212)
chr2 (442-514)||(42706890-42706962)
[»] scaffold0068 (1 HSPs)
scaffold0068 (439-526)||(59255-59342)
[»] chr8 (40 HSPs)
chr8 (439-526)||(8438560-8438647)
chr8 (470-526)||(37266135-37266191)
chr8 (475-558)||(17564701-17564784)
chr8 (440-526)||(33452316-33452403)
chr8 (440-526)||(3075959-3076045)
chr8 (438-519)||(11140090-11140171)
chr8 (475-519)||(8437930-8437974)
chr8 (475-519)||(11141061-11141105)
chr8 (475-519)||(13422066-13422110)
chr8 (475-519)||(32905327-32905371)
chr8 (490-558)||(34925366-34925434)
chr8 (475-515)||(37304896-37304936)
chr8 (475-519)||(41311703-41311747)
chr8 (475-526)||(5551586-5551637)
chr8 (475-514)||(11760072-11760111)
chr8 (475-526)||(14094143-14094194)
chr8 (487-526)||(30354520-30354559)
chr8 (439-518)||(31846444-31846523)
chr8 (475-558)||(34363944-34364026)
chr8 (475-558)||(36016721-36016803)
chr8 (475-526)||(37836952-37837003)
chr8 (475-526)||(40791079-40791130)
chr8 (439-526)||(44284343-44284430)
chr8 (475-513)||(24778021-24778059)
chr8 (475-516)||(3075339-3075380)
chr8 (475-520)||(6099475-6099520)
chr8 (475-556)||(14879553-14879634)
chr8 (486-519)||(34923885-34923918)
chr8 (475-519)||(13421474-13421518)
chr8 (439-519)||(14093478-14093558)
chr8 (475-519)||(14363808-14363852)
chr8 (475-519)||(14880188-14880232)
chr8 (475-519)||(22934322-22934366)
chr8 (461-513)||(30991373-30991425)
chr8 (475-519)||(31739542-31739586)
chr8 (475-519)||(32904219-32904263)
chr8 (475-511)||(37872303-37872339)
chr8 (475-519)||(39998403-39998447)
chr8 (475-519)||(40791755-40791799)
chr8 (475-519)||(41312380-41312424)
[»] chr6 (28 HSPs)
chr6 (439-526)||(21802597-21802684)
chr6 (438-526)||(12767599-12767687)
chr6 (475-521)||(31881871-31881917)
chr6 (475-519)||(4125907-4125951)
chr6 (475-526)||(2522699-2522750)
chr6 (475-519)||(4100545-4100589)
chr6 (475-519)||(12026197-12026241)
chr6 (459-519)||(21847369-21847429)
chr6 (475-519)||(22022274-22022318)
chr6 (475-519)||(25527760-25527804)
chr6 (475-514)||(6936405-6936444)
chr6 (475-521)||(188431-188477)
chr6 (488-526)||(15499489-15499527)
chr6 (475-519)||(7127657-7127701)
chr6 (475-511)||(7448259-7448295)
chr6 (475-519)||(10702301-10702345)
chr6 (475-519)||(11522830-11522874)
chr6 (475-519)||(12033117-12033161)
chr6 (439-519)||(12409407-12409487)
chr6 (461-513)||(12767055-12767107)
chr6 (475-519)||(14313849-14313893)
chr6 (475-519)||(16326070-16326114)
chr6 (475-519)||(16349468-16349512)
chr6 (475-519)||(21801969-21802013)
chr6 (470-526)||(31282238-31282294)
chr6 (475-519)||(32113769-32113813)
chr6 (479-519)||(33950260-33950300)
chr6 (475-519)||(34280681-34280725)
[»] scaffold0361 (1 HSPs)
scaffold0361 (439-519)||(17148-17228)
[»] chr7 (47 HSPs)
chr7 (477-558)||(22711667-22711748)
chr7 (475-519)||(5228638-5228682)
chr7 (475-519)||(12677130-12677174)
chr7 (475-558)||(19333011-19333094)
chr7 (475-526)||(20261574-20261625)
chr7 (475-558)||(40401512-40401595)
chr7 (475-526)||(48872042-48872093)
chr7 (439-513)||(42813584-42813658)
chr7 (475-519)||(10412555-10412599)
chr7 (475-519)||(27144212-27144256)
chr7 (475-519)||(29615547-29615591)
chr7 (475-519)||(29823361-29823405)
chr7 (487-547)||(33576663-33576723)
chr7 (475-519)||(33869224-33869268)
chr7 (475-519)||(34999216-34999260)
chr7 (430-513)||(20115655-20115738)
chr7 (475-526)||(28308663-28308714)
chr7 (450-513)||(29736696-29736759)
chr7 (475-526)||(31221448-31221499)
chr7 (475-526)||(38987783-38987834)
chr7 (475-526)||(46011112-46011163)
chr7 (443-513)||(4518389-4518459)
chr7 (475-513)||(40344442-40344480)
chr7 (475-524)||(1573748-1573797)
chr7 (438-519)||(22263757-22263838)
chr7 (436-513)||(38669987-38670064)
chr7 (475-519)||(25287-25331)
chr7 (475-519)||(317309-317353)
chr7 (438-514)||(3341445-3341521)
chr7 (475-519)||(6184683-6184726)
chr7 (486-526)||(8123269-8123309)
chr7 (475-515)||(8535437-8535477)
chr7 (475-519)||(11639927-11639971)
chr7 (475-519)||(12679025-12679069)
chr7 (475-519)||(13068406-13068450)
chr7 (475-519)||(14078387-14078431)
chr7 (475-519)||(14388415-14388459)
chr7 (432-484)||(20096853-20096905)
chr7 (475-519)||(25607611-25607655)
chr7 (475-515)||(27619637-27619677)
chr7 (475-519)||(30738221-30738265)
chr7 (475-519)||(30870578-30870622)
chr7 (434-514)||(31388133-31388213)
chr7 (461-513)||(32867805-32867857)
chr7 (475-519)||(32867902-32867946)
chr7 (475-515)||(40400933-40400973)
chr7 (475-519)||(48982538-48982582)
[»] chr3 (49 HSPs)
chr3 (475-564)||(49765083-49765172)
chr3 (439-526)||(44500035-44500122)
chr3 (475-526)||(1262430-1262481)
chr3 (475-526)||(18364663-18364714)
chr3 (475-526)||(30605338-30605389)
chr3 (475-526)||(54605795-54605846)
chr3 (475-524)||(11345353-11345402)
chr3 (475-564)||(40036350-40036439)
chr3 (475-519)||(18365280-18365324)
chr3 (459-519)||(22518579-22518639)
chr3 (475-519)||(32737170-32737214)
chr3 (475-519)||(45241234-45241278)
chr3 (439-519)||(49080608-49080688)
chr3 (475-518)||(2756607-2756650)
chr3 (475-526)||(3090410-3090461)
chr3 (436-519)||(5963051-5963134)
chr3 (439-526)||(9830271-9830358)
chr3 (439-514)||(11397584-11397659)
chr3 (475-526)||(17764954-17765005)
chr3 (475-526)||(19066274-19066325)
chr3 (475-514)||(27255318-27255357)
chr3 (475-526)||(41587303-41587354)
chr3 (475-526)||(53490723-53490774)
chr3 (475-526)||(54403592-54403643)
chr3 (475-509)||(25259947-25259981)
chr3 (439-513)||(33115239-33115313)
chr3 (475-509)||(33979290-33979324)
chr3 (475-516)||(4757028-4757069)
chr3 (475-516)||(16067257-16067298)
chr3 (475-516)||(19547032-19547073)
chr3 (475-519)||(291782-291826)
chr3 (439-519)||(1364051-1364131)
chr3 (475-519)||(1763676-1763720)
chr3 (475-519)||(3089783-3089827)
chr3 (475-519)||(4558065-4558109)
chr3 (461-513)||(4757117-4757169)
chr3 (475-519)||(10887743-10887787)
chr3 (475-519)||(11055824-11055868)
chr3 (461-513)||(11388975-11389027)
chr3 (461-513)||(11581989-11582041)
chr3 (475-519)||(22129720-22129764)
chr3 (475-519)||(23309619-23309663)
chr3 (475-519)||(27638508-27638552)
chr3 (475-519)||(37183111-37183155)
chr3 (475-519)||(40927526-40927570)
chr3 (475-519)||(40974069-40974113)
chr3 (475-526)||(49079992-49080041)
chr3 (475-519)||(54606423-54606467)
chr3 (475-511)||(55204968-55205004)
[»] chr5 (30 HSPs)
chr5 (439-519)||(1406235-1406315)
chr5 (439-513)||(31849999-31850073)
chr5 (475-519)||(4877374-4877418)
chr5 (475-519)||(20570159-20570203)
chr5 (440-516)||(38497324-38497400)
chr5 (439-526)||(13279474-13279561)
chr5 (475-519)||(8573348-8573392)
chr5 (475-519)||(19408570-19408614)
chr5 (475-519)||(27979899-27979943)
chr5 (475-515)||(32458516-32458556)
chr5 (475-519)||(36742581-36742625)
chr5 (475-519)||(42598987-42599031)
chr5 (475-526)||(13685999-13686050)
chr5 (475-526)||(22731052-22731103)
chr5 (475-526)||(27979262-27979313)
chr5 (475-526)||(36737441-36737492)
chr5 (465-519)||(4717272-4717326)
chr5 (437-526)||(8437735-8437825)
chr5 (475-521)||(27028638-27028684)
chr5 (492-526)||(36853666-36853700)
chr5 (426-507)||(2074726-2074807)
chr5 (438-519)||(17780340-17780421)
chr5 (490-519)||(20217239-20217268)
chr5 (440-513)||(32050598-32050671)
chr5 (475-511)||(6029485-6029521)
chr5 (475-519)||(9017678-9017722)
chr5 (478-526)||(20570192-20570240)
chr5 (479-515)||(20570831-20570867)
chr5 (475-519)||(35751547-35751591)
chr5 (475-519)||(37658074-37658118)
[»] chr4 (42 HSPs)
chr4 (475-526)||(13482214-13482265)
chr4 (438-521)||(29429697-29429780)
chr4 (475-524)||(16192310-16192359)
chr4 (461-526)||(51019668-51019733)
chr4 (477-526)||(54096708-54096757)
chr4 (462-526)||(21037316-21037380)
chr4 (475-519)||(26705669-26705713)
chr4 (475-526)||(17730173-17730224)
chr4 (475-526)||(36898092-36898143)
chr4 (475-518)||(41919909-41919952)
chr4 (475-526)||(55814990-55815041)
chr4 (475-516)||(4949965-4950006)
chr4 (475-524)||(55068874-55068923)
chr4 (475-512)||(56310073-56310110)
chr4 (475-519)||(17722781-17722825)
chr4 (475-519)||(19313376-19313420)
chr4 (475-515)||(25010061-25010101)
chr4 (475-519)||(30192540-30192584)
chr4 (475-519)||(35667283-35667327)
chr4 (475-519)||(35667566-35667610)
chr4 (475-519)||(44665185-44665229)
chr4 (475-519)||(46095437-46095481)
chr4 (475-519)||(47030482-47030526)
chr4 (475-526)||(23722044-23722095)
chr4 (475-558)||(38720580-38720663)
chr4 (475-517)||(35667758-35667800)
chr4 (475-517)||(37423811-37423853)
chr4 (487-521)||(45847765-45847799)
chr4 (475-512)||(13772389-13772426)
chr4 (475-512)||(17723426-17723463)
chr4 (438-519)||(20545018-20545099)
chr4 (475-516)||(33047232-33047273)
chr4 (475-519)||(796414-796458)
chr4 (475-519)||(6233103-6233147)
chr4 (475-519)||(7166078-7166122)
chr4 (475-519)||(8192990-8193034)
chr4 (475-519)||(10155534-10155578)
chr4 (475-519)||(13771749-13771793)
chr4 (475-519)||(16960236-16960280)
chr4 (470-526)||(16960867-16960923)
chr4 (475-519)||(37708806-37708850)
chr4 (475-515)||(51268553-51268593)
[»] chr1 (36 HSPs)
chr1 (472-519)||(794747-794794)
chr1 (475-518)||(8061056-8061099)
chr1 (461-526)||(27225692-27225757)
chr1 (475-519)||(51362486-51362530)
chr1 (475-526)||(16536402-16536453)
chr1 (475-526)||(18406560-18406611)
chr1 (475-558)||(45738030-45738113)
chr1 (475-516)||(19071742-19071783)
chr1 (475-516)||(19119632-19119673)
chr1 (475-519)||(9091067-9091111)
chr1 (475-519)||(18407201-18407245)
chr1 (475-519)||(19072358-19072402)
chr1 (475-519)||(19120248-19120292)
chr1 (475-519)||(41321543-41321587)
chr1 (475-519)||(41575842-41575886)
chr1 (475-519)||(41576011-41576055)
chr1 (475-519)||(42831201-42831245)
chr1 (475-558)||(4007583-4007666)
chr1 (475-526)||(43320570-43320621)
chr1 (475-558)||(44645291-44645374)
chr1 (475-526)||(45737335-45737386)
chr1 (475-526)||(50143415-50143466)
chr1 (439-513)||(1114888-1114962)
chr1 (461-519)||(9997998-9998056)
chr1 (475-513)||(29344551-29344589)
chr1 (489-519)||(31766002-31766032)
chr1 (477-519)||(47553169-47553211)
chr1 (439-516)||(47233717-47233794)
chr1 (438-519)||(50144051-50144132)
chr1 (475-519)||(11916481-11916525)
chr1 (475-511)||(11917126-11917162)
chr1 (490-526)||(17109350-17109386)
chr1 (475-519)||(29510478-29510522)
chr1 (475-519)||(38011853-38011897)
chr1 (475-519)||(43319946-43319990)
chr1 (475-515)||(43504462-43504502)
[»] scaffold0115 (1 HSPs)
scaffold0115 (475-519)||(31353-31397)
[»] scaffold0189 (1 HSPs)
scaffold0189 (475-526)||(11320-11371)
[»] scaffold0051 (1 HSPs)
scaffold0051 (475-526)||(11622-11673)
[»] scaffold0034 (1 HSPs)
scaffold0034 (439-518)||(25901-25980)
[»] scaffold0368 (1 HSPs)
scaffold0368 (475-519)||(11257-11301)
[»] scaffold0289 (1 HSPs)
scaffold0289 (475-519)||(3439-3483)
[»] scaffold0003 (1 HSPs)
scaffold0003 (475-519)||(421178-421222)
[»] scaffold0695 (2 HSPs)
scaffold0695 (475-526)||(2254-2305)
scaffold0695 (439-519)||(2889-2969)
[»] scaffold0340 (1 HSPs)
scaffold0340 (475-518)||(12860-12903)
[»] scaffold0043 (1 HSPs)
scaffold0043 (436-513)||(67707-67784)
[»] scaffold2113 (1 HSPs)
scaffold2113 (475-519)||(757-801)
[»] scaffold0105 (1 HSPs)
scaffold0105 (475-519)||(19646-19690)
[»] scaffold0006 (1 HSPs)
scaffold0006 (475-519)||(161288-161332)


Alignment Details
Target: chr2 (Bit Score: 287; Significance: 1e-161; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 209 - 596
Target Start/End: Original strand, 15890443 - 15890826
Alignment:
Q  209 agttcctaagtttgtggataaaactgaaacacacaagctacatggaaactgtgtgagtgagagttggatttattattggacttattccttttccatctta 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||||    
T  15890443 agttcctaagtttgtggataaaactgaaacacacaagctacatggaaactgtgtga----gagttggatttgttattggacttattccttttccatctta 15890538  T
Q  309 tgaaatgtctatgaaatttttggattatataattgaaaatgagttttctctgtcttggacatcaatttagatgatacaattcgaacacctcaaaaaatag 408  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15890539 tgaaatgtccatgaaatttttggattatataattgaaaatgagttttctctgttttggacatcaatttagatgatacaatttgaacacctcaaaaaatag 15890638  T
Q  409 gatgtannnnnnnnattattattataaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatat 508  Q
    |||| |        ||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||  ||||| |||||||||||||||||    
T  15890639 gatgcattttttttattattattataaaatgagtaaattacactctcctcccctaagagaatctttaattacacttccctccccttttatgttaaaatat 15890738  T
Q  509 acactcccctctcttgaagggtagaatgcatactctccttccctataagacacttgtttatgtacatatttctcagaatcagaatcac 596  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15890739 acactcctctcttttgaagggtagaatgcatactctccttccctataagacacttgtttatgtacatatttctctgaatcagaatcac 15890826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 15890253 - 15890411
Alignment:
Q  19 agtgtgagtaatataaacagttccagaaagctaccataagaataataatgagctacaattgtgaaactgataatttagtttttggaagaagttttgtgcc 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15890253 agtgtgagtaatatgaacagttccagaaagctaccataagaataataatgagctataattgtgaaactgataatttagtttttggaagaagttttgtgcc 15890352  T
Q  119 aaagatgatgatagaaagtattttctttcttgattggctgacattgattttgtatgatg 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890353 aaagatgatgatagaaagtattttctttcttgattggctgacattgattttgtatgatg 15890411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 439 - 509
Target Start/End: Original strand, 36449707 - 36449777
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatata 509  Q
    ||||||||||||||||| || |||||||||| ||| |||||||||| |||  |||||||||||||||||||    
T  36449707 gagtaaattacactctccttctctaagagaagcttgaattacactccccttttcttttatgttaaaatata 36449777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 7940037 - 7939993
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  7940037 aattacactctcctccccttttatgttaaaatatacactcccctc 7939993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 1366456 - 1366405
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  1366456 aattacactctcctcctctcttatgttaaaatatacatttccctctcttgaa 1366405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 558
Target Start/End: Complemental strand, 33476600 - 33476517
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    ||||||||||  ||||||| |||||||||||||||| |||||||||||||||  ||| |||  | |||||||| ||||||||||    
T  33476600 aattacactcatctcctctcttatgttaaaatatacgctcccctctcttgaaaagtaaaatttacactctcctcccctataaga 33476517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 558
Target Start/End: Complemental strand, 37199643 - 37199560
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| ||||||  ||| |||  |||||| ||| ||||||||||    
T  37199643 aattacactcccctcccctcttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcccctataaga 37199560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 40947462 - 40947503
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  40947462 aattacactctcctccccttttatgttaaaatatacactccc 40947503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 41078199 - 41078158
Alignment:
Q  478 tacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  41078199 tacactctcctcctctcttatgttaaaatatacactcccctc 41078158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 558
Target Start/End: Original strand, 7939357 - 7939440
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||||||| | || |||||||||||||||||||  |||| ||||||  ||| |||  ||||||||||| |||||||||    
T  7939357 aattacactctccttccctcttatgttaaaatatacacttacctcccttgaaaagtaaaatttatactctcctttcctataaga 7939440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 439 - 514
Target Start/End: Complemental strand, 22298330 - 22298255
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 514  Q
    |||||||||||||||   | ||||||||||| ||| ||||||||||  |||| || ||||||||||||||||||||    
T  22298330 gagtaaattacactcctctcttctaagagaagcttgaattacactcctctcccctcttatgttaaaatatacactc 22298255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 26196237 - 26196278
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  26196237 aattacactctcatcctctcttatgttaaaatatacactccc 26196278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 10357164 - 10357120
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  10357164 aattacactcccctcccctcttatgttaaaatatacactcccctc 10357120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 11051589 - 11051633
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| || ||||| |||||||||||||||||||||||||    
T  11051589 aattacactccccacctctcttatgttaaaatatacactcccctc 11051633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 44332426 - 44332382
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  44332426 aattacactctcatcccctcttatgttaaaatatacactcccctc 44332382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 3044958 - 3045001
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccct 518  Q
    |||||||||||||||  || ||||||||||||||||||||||||    
T  3044958 aattacactctcctcacctcttatgttaaaatatacactcccct 3045001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 558
Target Start/End: Complemental strand, 3045622 - 3045559
Alignment:
Q  495 ttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    ||||||||||||||||||| ||||||||||||  ||| |||  |||||| ||| ||||||||||    
T  3045622 ttatgttaaaatatacacttccctctcttgaaaagtaaaatttatactcccctcccctataaga 3045559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 6229928 - 6229877
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||| | || ||||||||||||||||||||||||| ||||||    
T  6229928 aattacactccccttccctcttatgttaaaatatacactcccctcccttgaa 6229877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 514
Target Start/End: Complemental strand, 13874029 - 13873990
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactc 514  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  13874029 aattacactcttctcctctcttatgttaaaatatacactc 13873990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 514
Target Start/End: Complemental strand, 14014154 - 14014115
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactc 514  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  14014154 aattacactcttctcctctcttatgttaaaatatacactc 14014115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 31597255 - 31597306
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||| ||||||||| ||||||    
T  31597255 aattacactcacctcccctcttatgttaaaatataaactcccctcccttgaa 31597306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 33146065 - 33146116
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||| ||||| ||||| || ||||||||||||||||||||||||| ||||||    
T  33146065 aattgcactcccctcccctcttatgttaaaatatacactcccctcccttgaa 33146116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 34173757 - 34173706
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||| ||||||    
T  34173757 aattacactcccctcccctcttatgttaaaatatacattcccctcccttgaa 34173706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 35175642 - 35175696
Alignment:
Q  464 agagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||| |||||| ||||||| ||||| || |||||||||||||||||||||||||    
T  35175642 agagaagctttaactacactc-cctcccctcttatgttaaaatatacactcccctc 35175696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 37009703 - 37009652
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||  |||| || ||||||||||||||||||||||||| ||||||    
T  37009703 aattacactcctctcccctcttatgttaaaatatacactcccctcccttgaa 37009652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 513
Target Start/End: Original strand, 38910705 - 38910743
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  38910705 aattacactcccctcctctcttatgttaaaatatacact 38910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 519
Target Start/End: Original strand, 40768822 - 40768908
Alignment:
Q  433 taaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||| |||||||||||| |  | |||||| | |||  ||| ||||||| ||||||   ||||||||||||||||||||||||||||    
T  40768822 taaaaagagtaaattacatttcccttttctcaaagatgcttgaattacattctcctttccttttatgttaaaatatacactcccctc 40768908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Complemental strand, 41521704 - 41521667
Alignment:
Q  482 ctctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| || |||||||||||||||||||||||||    
T  41521704 ctctcctcccctcttatgttaaaatatacactcccctc 41521667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 3515516 - 3515472
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||| | ||||| || |||||||||||||||||||||||||    
T  3515516 aattacacccccctcccctcttatgttaaaatatacactcccctc 3515472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 5475177 - 5475141
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatataca 511  Q
    |||||||||||||||| || |||||||||||||||||    
T  5475177 aattacactctcctcccctcttatgttaaaatataca 5475141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 8313686 - 8313726
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  8313686 aattacactcccctcccctcttatgttaaaatatacactcc 8313726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 11796170 - 11796214
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||| ||||||||||||    
T  11796170 aattacactcccctcccctcttatgttaaaatgtacactcccctc 11796214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 495 - 523
Target Start/End: Original strand, 17449771 - 17449799
Alignment:
Q  495 ttatgttaaaatatacactcccctctctt 523  Q
    |||||||||||||||||||||||||||||    
T  17449771 ttatgttaaaatatacactcccctctctt 17449799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 17829081 - 17829125
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||  |||| || |||||||||||||||||||||||||    
T  17829081 aattacactccactcccctcttatgttaaaatatacactcccctc 17829125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 20894324 - 20894280
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  20894324 aattacactcccctcccctcttaagttaaaatatacactcccctc 20894280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 34173076 - 34173120
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  34173076 aattacactaccctcccctcttatgttaaaatatacactcccctc 34173120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 34579649 - 34579693
Alignment:
Q  469 atctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||| ||||||| | | |||||||||||||||||||||||||||    
T  34579649 atcttaaattacattattctcctcttttatgttaaaatatacact 34579693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 34585398 - 34585442
Alignment:
Q  469 atctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||| ||||||| | | |||||||||||||||||||||||||||    
T  34585398 atcttaaattacattattctcctcttttatgttaaaatatacact 34585442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 35899168 - 35899212
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  35899168 aattacactcccctcccctcttaagttaaaatatacactcccctc 35899212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 514
Target Start/End: Complemental strand, 42706962 - 42706890
Alignment:
Q  442 taaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 514  Q
    ||||||||| | ||||||  ||||| || ||| ||||||||||| ||| ||| |||||||||||||| |||||    
T  42706962 taaattacattatcttttcgtaagataaacttgaattacactcttctcatctcttatgttaaaatatgcactc 42706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 439 - 526
Target Start/End: Original strand, 59255 - 59342
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||||| |  ||||| |||  ||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  59255 gagtaaattacactctcctcctctaaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactcccctcccttgaa 59342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 4e-18; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 439 - 526
Target Start/End: Complemental strand, 8438647 - 8438560
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||| | ||| ||||||||||| ||| ||||||||||  || |||| |||||||||||||||||||||||||| |||||    
T  8438647 gagtaaattacacccccttcttctaagagaaacttgaattacactccacttctctcttatgttaaaatatacactcccctctattgaa 8438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 470 - 526
Target Start/End: Complemental strand, 37266191 - 37266135
Alignment:
Q  470 tctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| ||| ||||||    
T  37266191 tctttaattacactctcctcccctcttatgttaaaatatacactccactcccttgaa 37266135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 558
Target Start/End: Original strand, 17564701 - 17564784
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||  ||||| || ||||||||||||||||||||||||| ||||||  ||| |||  |||||| ||| ||||||||||    
T  17564701 aattacacttccctcccctcttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcccctataaga 17564784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 440 - 526
Target Start/End: Complemental strand, 33452403 - 33452316
Alignment:
Q  440 agtaaattacactctctttttctaagagaatctttaattacactctcctcctc-ttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||   ||||||||||||| | | ||||||||| | |||||| |||||||||||||||||||| |  ||||||||||    
T  33452403 agtaaattacactcatcttttctaagagaagcataaattacacttttctcctctttttatgttaaaatatacacacttctctcttgaa 33452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 526
Target Start/End: Complemental strand, 3076045 - 3075959
Alignment:
Q  440 agtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||||||| |  ||| | |||  ||| |||||||||| ||||  || |||| |||||||||||||||||||||||||||    
T  3076045 agtaaattacactctcctcctctcaaagatgcttgaattacactcccctctcctcttatattaaaatatacactcccctctcttgaa 3075959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 11140090 - 11140171
Alignment:
Q  438 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||| ||||||||||| | | | |||| |||  ||| |||||||||| ||||| || |||||||||||||||||||||||||    
T  11140090 tgagcaaattacactcccgtctcctaaaagatacttgaattacactcccctcccctcttatgttaaaatatacactcccctc 11140171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 8437930 - 8437974
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||    
T  8437930 aattacactccactcctctcttatgttaaaatatacactcccctc 8437974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 11141105 - 11141061
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||| || |||||||| |||||||||||||||||||||||||    
T  11141105 aattacattcccctcctctcttatgttaaaatatacactcccctc 11141061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 13422110 - 13422066
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  13422110 aattacactcccctcccctcttatgttaaaatatacactcccctc 13422066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 32905371 - 32905327
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||    
T  32905371 aattacactctcctccctttttatgttaaaatatacacttccctc 32905327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 34925434 - 34925366
Alignment:
Q  490 ctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||| ||||||||||||||||||||||||| ||||||  ||| |||| |||||||| | || |||||||    
T  34925434 ctctcttatgttaaaatatacactcccctcccttgaaaagtaaaatgtatactctcttcccttataaga 34925366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 37304936 - 37304896
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  37304936 aattacactctccttctcttttatgttaaaatatagactcc 37304896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 41311703 - 41311747
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||    
T  41311703 aattacactctactccccttttatgttaaaatatacattcccctc 41311747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 5551586 - 5551637
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||||||| ||||| ||||||||||| || |||| ||||||    
T  5551586 aattacactctcctcctctcttatgctaaaatatacaatctcctcccttgaa 5551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 514
Target Start/End: Complemental strand, 11760111 - 11760072
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactc 514  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  11760111 aattacattctcctcctctcttatgttaaaatatacactc 11760072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 14094194 - 14094143
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || |||||||||||| |||||||||||| ||||||    
T  14094194 aattacactcccctcccctcttatgttaaaatttacactcccctcccttgaa 14094143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 526
Target Start/End: Complemental strand, 30354559 - 30354520
Alignment:
Q  487 ctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  30354559 ctcctcttttatgttaaaatatacactcctctcccttgaa 30354520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 518
Target Start/End: Original strand, 31846444 - 31846523
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccct 518  Q
    ||||||||||||||||| ||  |||| |||   || |||||||||  ||||| || ||||||||||||||||||||||||    
T  31846444 gagtaaattacactctccttccctaaaagatgattgaattacacttccctcccctcttatgttaaaatatacactcccct 31846523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 558
Target Start/End: Original strand, 34363944 - 34364026
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||| ||||| |||| ||||||||||||||| | ||||| ||||||  ||| |||  |||||| ||||||||||||||    
T  34363944 aattacactcccctccccttt-atgttaaaatatacatttccctcccttgaaaagtaaaatttatactccccttccctataaga 34364026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 558
Target Start/End: Complemental strand, 36016803 - 36016721
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    ||||||| || |||||||| ||||||||||||||||||| ||||| ||||||  ||| |||  |||||||||| || |||||||    
T  36016803 aattacaatcccctcctctcttatgttaaaatatacact-ccctcccttgaaaagtaaaatttatactctcctcccttataaga 36016721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 37836952 - 37837003
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||| ||||||    
T  37836952 aattacactccccttctctattatgttaaaatatacattcccctcccttgaa 37837003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 40791079 - 40791130
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||| |||||||||| || ||||||||||||||||||| ||||| ||||||    
T  40791079 aattatactctcctcccctcttatgttaaaatatacactaccctcccttgaa 40791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 526
Target Start/End: Complemental strand, 44284430 - 44284343
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||| | |   ||||||||  ||| |||||||||| ||||| || |||||||||||||||||||  |||| ||||||    
T  44284430 gagtaaattacactcccctcccctaagagatgcttgaattacactcccctcccctcttatgttaaaatatacactttcctcccttgaa 44284343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 513
Target Start/End: Original strand, 24778021 - 24778059
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||||||||||||| || |||||||||||||||||||    
T  24778021 aattacactctcctcccctcttatgttaaaatatacact 24778059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 3075339 - 3075380
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||| ||||| || ||||||||||||||||||||||    
T  3075339 aattacactcccctcccctcttatgttaaaatatacactccc 3075380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 6099520 - 6099475
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctct 520  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||    
T  6099520 aattacactctcctctcctcttatgttaaaatatacaatcccctct 6099475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 556
Target Start/End: Original strand, 14879553 - 14879634
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataa 556  Q
    |||||||||||||||| || ||||||||||||||||| | || || ||||||  ||| |||  |||||| ||| ||||||||    
T  14879553 aattacactctcctcccctcttatgttaaaatatacatttccgtcccttgaaaagtaaaatttatactcccctcccctataa 14879634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 519
Target Start/End: Original strand, 34923885 - 34923918
Alignment:
Q  486 cctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||| |||||||||||||||||||||||||    
T  34923885 cctcctctcttatgttaaaatatacactcccctc 34923918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 13421474 - 13421518
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||| ||  || |||||||||||||||||||||||||    
T  13421474 aattacactctcatctcctcttatgttaaaatatacactcccctc 13421518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 519
Target Start/End: Original strand, 14093478 - 14093558
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||||||   || | |||  ||| ||||||||||  ||| ||| ||| |||||||||||||||||||||    
T  14093478 gagtaaattacactctcttccccttaaagatgcttaaattacactcctctcatctcttaagttaaaatatacactcccctc 14093558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 14363808 - 14363852
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  14363808 aattacactcccctcccctcttaagttaaaatatacactcccctc 14363852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 14880232 - 14880188
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||||||||||||||||||| |||||    
T  14880232 aattacactcccctcccctcttatgttaaaatatacacttccctc 14880188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 22934322 - 22934366
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  22934322 aattacactcccctcccctcttaagttaaaatatacactcccctc 22934366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 513
Target Start/End: Complemental strand, 30991425 - 30991373
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||| ||| ||||||| || |||||||| |||||||||||| ||||||    
T  30991425 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacact 30991373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 31739542 - 31739586
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| || ||| || |||||||||||||||||||||||||    
T  31739542 aattacactgtcatcccctcttatgttaaaatatacactcccctc 31739586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 32904263 - 32904219
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||||||||||||||||||| |||||    
T  32904263 aattacactcccctcccctcttatgttaaaatatacacttccctc 32904219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 511
Target Start/End: Original strand, 37872303 - 37872339
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatataca 511  Q
    |||||||||| |||||||| |||||||||||||||||    
T  37872303 aattacactcccctcctctcttatgttaaaatataca 37872339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 39998403 - 39998447
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||| ||||||||| |||||||||||    
T  39998403 aattacactctcctcccctcttaagttaaaatacacactcccctc 39998447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 40791799 - 40791755
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||  |||| || |||||||||||||||||||||||||    
T  40791799 aattacactcctctcccctcttatgttaaaatatacactcccctc 40791755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 41312424 - 41312380
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||||||||||||||||| |||||||    
T  41312424 aattacactcccctcccctcttatgttaaaatatacattcccctc 41312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 439 - 526
Target Start/End: Complemental strand, 21802684 - 21802597
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||||| |  ||||| |||  ||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  21802684 gagtaaattacactctcctcctctaaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactcccctcccttgaa 21802597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 438 - 526
Target Start/End: Complemental strand, 12767687 - 12767599
Alignment:
Q  438 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||||||| | | | ||||||||| ||| |||||||||| ||||| || ||||||||||||||||||| ||||| ||||||    
T  12767687 tgagtaaattacactcccctctcctaagagaagcttgaattacactcccctcccctcttatgttaaaatatacacttccctcccttgaa 12767599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 475 - 521
Target Start/End: Original strand, 31881871 - 31881917
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctc 521  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  31881871 aattacactcccctccccttttatgttaaaatatacactcccctctc 31881917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 4125907 - 4125951
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  4125907 aattacactctcctcccctcttatgttaaaatatacactcccctc 4125951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 2522699 - 2522750
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||||||| || |||| |||||||||||||||||||| ||||||    
T  2522699 aattacactctcctcccctcttatattaaaatatacactcccctcccttgaa 2522750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 4100545 - 4100589
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  4100545 aattacactcccctcccctcttatgttaaaatatacactcccctc 4100589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 12026241 - 12026197
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  12026241 aattacactcccctcccctcttatgttaaaatatacactcccctc 12026197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 21847429 - 21847369
Alignment:
Q  459 ttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||| || ||| ||||| |||||||||| || ||||||||||||||||||| |||||    
T  21847429 ttctaagaaaagcttgaattagactctcctcccctcttatgttaaaatatacacttccctc 21847369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 22022318 - 22022274
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  22022318 aattacactctcatcccctcttatgttaaaatatacactcccctc 22022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 25527760 - 25527804
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  25527760 aattacactctcctcccctcttaagttaaaatatacactcccctc 25527804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 514
Target Start/End: Original strand, 6936405 - 6936444
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactc 514  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  6936405 aattacactctcctcccctcttatgttaaaatatacactc 6936444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 521
Target Start/End: Complemental strand, 188477 - 188431
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctc 521  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||||    
T  188477 aattacactcccctcccctcttaagttaaaatatacactcccctctc 188431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 526
Target Start/End: Complemental strand, 15499527 - 15499489
Alignment:
Q  488 tcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  15499527 tcctctcttatgttaaaatatacactcccctcccttgaa 15499489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 7127701 - 7127657
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| |||||| |||||||| ||||||||||||    
T  7127701 aattacactcccctccccttttaagttaaaatgtacactcccctc 7127657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 511
Target Start/End: Original strand, 7448259 - 7448295
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatataca 511  Q
    |||||||||||||| |||| |||||||||||||||||    
T  7448259 aattacactctccttctctcttatgttaaaatataca 7448295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 10702301 - 10702345
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  10702301 aattacacttccctcccctcttatgttaaaatatacactcccctc 10702345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 11522830 - 11522874
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  11522830 aattacactcccctcccctcttaagttaaaatatacactcccctc 11522874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 12033161 - 12033117
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  12033161 aattacactcccctcccctcttaagttaaaatatacactcccctc 12033117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 519
Target Start/End: Original strand, 12409407 - 12409487
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||| | |   ||||||||| ||| ||| |||||| ||||| ||  ||||||||||||||||||| ||||    
T  12409407 gagtaaattacactcccctcccctaagagaagcttgaatcacactcccctcccctcctatgttaaaatatacactctcctc 12409487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 513
Target Start/End: Original strand, 12767055 - 12767107
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||| ||| ||||||| |||||||| || |||||||||||| ||||||    
T  12767055 ctaagagaagcttgaattacattctcctcccctcttatgttaaaatttacact 12767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 14313893 - 14313849
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||||||||||||||||| |||||||    
T  14313893 aattacactcccctcccctcttatgttaaaatatacaatcccctc 14313849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 16326114 - 16326070
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||| ||||||||||||||||||||    
T  16326114 aattacactcacctcccctcttatattaaaatatacactcccctc 16326070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 16349512 - 16349468
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||| ||||||||||||||||||||    
T  16349512 aattacactcacctcccctcttatattaaaatatacactcccctc 16349468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 21801969 - 21802013
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| |||||  | |||||||||||||||||||||||||    
T  21801969 aattacactcccctccattcttatgttaaaatatacactcccctc 21802013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 470 - 526
Target Start/End: Complemental strand, 31282294 - 31282238
Alignment:
Q  470 tctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||| ||||||||||||||   || |||||||||||||||||| |||||| ||||||    
T  31282294 tcttgaattacactctcctatcctcttatgttaaaatatacacccccctcccttgaa 31282238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 32113769 - 32113813
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  32113769 aattacacttccctcccctcttatgttaaaatatacactcccctc 32113813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 519
Target Start/End: Original strand, 33950260 - 33950300
Alignment:
Q  479 acactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  33950260 acactctcctcccctcttattttaaaatatacactcccctc 33950300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 34280725 - 34280681
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  34280725 aattacactcccctcccctcttaagttaaaatatacactcccctc 34280681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 439 - 519
Target Start/End: Complemental strand, 17228 - 17148
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||| | | ||||||||||| ||| |||||||||| | ||| || |||||||||||||||||||||||||    
T  17228 gagtaaattacactcccctcttctaagagaagcttgaattacactcacatcccctcttatgttaaaatatacactcccctc 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 558
Target Start/End: Original strand, 22711667 - 22711748
Alignment:
Q  477 ttacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||  ||| |||  |||||| ||| ||||||||||    
T  22711667 ttacactctcctcccctcttatgttaaaatatacactccactctcttgaaaagtaaaatttatactcccctcccctataaga 22711748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 5228682 - 5228638
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  5228682 aattacactctcctccccttttatgttaaaatatacactcccctc 5228638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 12677130 - 12677174
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  12677130 aattacactctcctcccctcttatgttaaaatatacactcccctc 12677174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 558
Target Start/End: Complemental strand, 19333094 - 19333011
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    ||||||||||  ||||||||||| |||||||||||||||| ||| |||||||  ||| |||  |||||| ||| ||||||||||    
T  19333094 aattacactcctctcctcttttaagttaaaatatacactctcctttcttgaaaagtaaaatttatactcccctcccctataaga 19333011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 20261625 - 20261574
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||    
T  20261625 aattacactctcatcccctcttatgttaaaatatacactcccctcccttgaa 20261574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 558
Target Start/End: Complemental strand, 40401595 - 40401512
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||| ||||| || |||||||||||||||||||||| || ||||||  ||| |||  |||||||||| || |||||||    
T  40401595 aattacactcccctcccctcttatgttaaaatatacactcccttcccttgaaaagtaaaatttatactctcctcccttataaga 40401512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 48872042 - 48872093
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||| || |||||||| ||||||||||||||||||||||||| ||||||    
T  48872042 aattacattcccctcctctcttatgttaaaatatacactcccctcccttgaa 48872093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 513
Target Start/End: Complemental strand, 42813658 - 42813584
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||||||||||| ||  || | |||  ||| |||||||||| |||||||| |||||||||||||||||||    
T  42813658 gagtaaattacactctcattccctcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacact 42813584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 10412599 - 10412555
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  10412599 aattacactctcctcccctcttatgttaaaatatacacttccctc 10412555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 27144212 - 27144256
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  27144212 aattacactcccctcccctcttatgttaaaatatacactcccctc 27144256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 29615547 - 29615591
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||||||||||||||||| |||||||    
T  29615547 aattacactctcctcccctcttatgttaaaatatacattcccctc 29615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 29823361 - 29823405
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  29823361 aattacactctcctcccctcttaagttaaaatatacactcccctc 29823405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 33576723 - 33576663
Alignment:
Q  487 ctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctcct 547  Q
    ||||||| |||||||||||||||||||||||||| |||||  ||| |||  ||||||||||    
T  33576723 ctcctctcttatgttaaaatatacactcccctcttttgaaaagtaaaatttatactctcct 33576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 33869224 - 33869268
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||  || |||||||||||||||||||||||||    
T  33869224 aattacactctcctctcctcttatgttaaaatatacactcccctc 33869268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 34999216 - 34999260
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  34999216 aattacactcccctcccctcttatgttaaaatatacactcccctc 34999260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 513
Target Start/End: Complemental strand, 20115738 - 20115655
Alignment:
Q  430 ttataaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||| ||| |||||||||||| |||| |||||||||| ||| ||||||||||   |  ||| ||||||| |||||||||||    
T  20115738 ttataaattgattaaattacactccctttctctaagagaagcttgaattacactcatattttctcttatgttgaaatatacact 20115655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 28308714 - 28308663
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||| ||  || ||||||||||||||||||||||||| ||||||    
T  28308714 aattacactctcatctcctcttatgttaaaatatacactcccctcccttgaa 28308663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 513
Target Start/End: Complemental strand, 29736759 - 29736696
Alignment:
Q  450 actctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||||| ||||||||||| ||| ||||||| |||| ||| || |||||||||||| ||||||    
T  29736759 actctcttcttctaagagaagcttgaattacattctcatcccctcttatgttaaaatctacact 29736696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 31221499 - 31221448
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| |||||  | ||||||||||||||||||||||||| ||||||    
T  31221499 aattacactcccctcccttcttatgttaaaatatacactcccctcccttgaa 31221448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 38987783 - 38987834
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||| |||| ||||| || ||||||||||||||||||||| ||||||||||    
T  38987783 aattaaactcccctcccctcttatgttaaaatatacactccactctcttgaa 38987834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 46011163 - 46011112
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||| |||| |||||||||||||| |||||||||| ||||||    
T  46011163 aattacactccccttctctcttatgttaaaatatgcactcccctcccttgaa 46011112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 443 - 513
Target Start/End: Original strand, 4518389 - 4518459
Alignment:
Q  443 aaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||||||||||  ||||||||| ||| ||||||| |||| ||| || | |||||||||| ||||||    
T  4518389 aaattacactctctttccctaagagaagcttaaattacattctcatcccctctaatgttaaaatctacact 4518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 513
Target Start/End: Complemental strand, 40344480 - 40344442
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||||||||||||| || |||||||||||||||||||    
T  40344480 aattacactctcctcccctcttatgttaaaatatacact 40344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 1573797 - 1573748
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 524  Q
    |||||||||| ||||| || |||||||||||||||||||| |||| ||||    
T  1573797 aattacactcccctcccctcttatgttaaaatatacactcacctcccttg 1573748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 22263757 - 22263838
Alignment:
Q  438 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| | |  ||| | |||  ||| ||||||| ||| ||||||| ||||||||||||||||||| |||||    
T  22263757 tgagtaaattacactcccctcctctcaaagatgcttgaattacattcttctcctctcttatgttaaaatatacacttccctc 22263838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 513
Target Start/End: Original strand, 38669987 - 38670064
Alignment:
Q  436 aatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||||||||||||||| | | | || | |||  ||| |||||||||||||||| || ||| |||||||||||||||    
T  38669987 aatgagtaaattacactcccctctccttaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 38670064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 25287 - 25331
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  25287 aattacactcccctcccctcttaagttaaaatatacactcccctc 25331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 317309 - 317353
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  317309 aattacactcccctcccctcttaagttaaaatatacactcccctc 317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 514
Target Start/End: Complemental strand, 3341521 - 3341445
Alignment:
Q  438 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 514  Q
    ||||||||||||||||  |||  || | |||  ||| |||||||||||||||  || ||||||||||||||||||||    
T  3341521 tgagtaaattacactccatttccctcaaagatgcttgaattacactctcctctcctcttatgttaaaatatacactc 3341445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 6184683 - 6184726
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  6184683 aattacactctcctcc-ctcttaagttaaaatatacactcccctc 6184726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 526
Target Start/End: Complemental strand, 8123309 - 8123269
Alignment:
Q  486 cctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  8123309 cctcccctcttatgttaaaatatacacttccctctcttgaa 8123269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 8535477 - 8535437
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    |||||||||| ||||| |||||||||||||||||| |||||    
T  8535477 aattacactcccctccccttttatgttaaaatatatactcc 8535437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 11639927 - 11639971
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||| ||||    
T  11639927 aattacactcccctcccctcttatgttaaaatatacactctcctc 11639971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 12679025 - 12679069
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||| |||||||||| || ||||||||||||||||| |||||||    
T  12679025 aattatactctcctcccctcttatgttaaaatatacattcccctc 12679069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 13068450 - 13068406
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  |||||| | |||||||||||||||||||||||||    
T  13068450 aattacacttccctcctttcttatgttaaaatatacactcccctc 13068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 14078387 - 14078431
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||| |||||| ||| || |||||||||||||||||||||||||    
T  14078387 aattaaactctcttcccctcttatgttaaaatatacactcccctc 14078431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 14388415 - 14388459
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||| |||||| ||| || |||||||||||||||||||||||||    
T  14388415 aattaaactctcttcccctcttatgttaaaatatacactcccctc 14388459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 432 - 484
Target Start/End: Complemental strand, 20096905 - 20096853
Alignment:
Q  432 ataaaatgagtaaattacactctctttttctaagagaatctttaattacactc 484  Q
    ||||| ||||||||||||||||  ||||||||||||||  || ||||||||||    
T  20096905 ataaattgagtaaattacactccatttttctaagagaagtttgaattacactc 20096853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 25607655 - 25607611
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  25607655 aattacactcccctcccctcttaagttaaaatatacactcccctc 25607611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 27619677 - 27619637
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  27619677 aattacactcccctcccctcttatgttaaaatatacactcc 27619637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 30738221 - 30738265
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||| |||||| |||||||||||| |||| |||||||    
T  30738221 aattacactctcatcctctcttatgttaaaatttacattcccctc 30738265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 30870622 - 30870578
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||    
T  30870622 aattacacgctcctcctttcttaggttaaaatatacactcccctc 30870578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 514
Target Start/End: Complemental strand, 31388213 - 31388133
Alignment:
Q  434 aaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 514  Q
    |||| ||||||||||||||||| ||  ||||||||| ||| ||||||| | | ||  ||| |||||||||||| |||||||    
T  31388213 aaaaagagtaaattacactctccttccctaagagaagcttgaattacattattcttttctcttatgttaaaatctacactc 31388133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 513
Target Start/End: Complemental strand, 32867857 - 32867805
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||| ||| ||||||| || |||||||| |||||||||||| ||||||    
T  32867857 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacact 32867805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 32867946 - 32867902
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||  |||| || |||||||||||||||||||||||||    
T  32867946 aattacactcctctcccctcttatgttaaaatatacactcccctc 32867902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 40400933 - 40400973
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  40400933 aattacactctcatcccctcttatgttaaaatatacactcc 40400973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 48982582 - 48982538
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  48982582 aattacacttccctcccctcttatgttaaaatatacactcccctc 48982538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 475 - 564
Target Start/End: Complemental strand, 49765172 - 49765083
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataagacacttg 564  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||| |||||| |||| |||  |||||| ||| |||||||||| |||||    
T  49765172 aattacactcccctcccctcttatgttaaaatatacattcccctcccttgaaaggtaaaatttatactcccctcccctataagatacttg 49765083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 526
Target Start/End: Complemental strand, 44500122 - 44500035
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||||| ||  || | |||  ||| |||||||||| ||||| || ||||||||||||||||||| ||||||||||||    
T  44500122 gagtaaattacactctccttccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacacttccctctcttgaa 44500035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 1262430 - 1262481
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || |||||||||||||||||||| |||||||||||    
T  1262430 aattacactcccctcccctcttatgttaaaatatacactctcctctcttgaa 1262481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 18364663 - 18364714
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| ||||||    
T  18364663 aattacactcccctcccctcttatgttaaaatatacactcccctcccttgaa 18364714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 30605389 - 30605338
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||||||||||    
T  30605389 aattacactcccctccactcttatgttaaaatatacacttccctctcttgaa 30605338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 54605795 - 54605846
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| ||||||    
T  54605795 aattacactcccctcccctcttatgttaaaatatacactcccctcccttgaa 54605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 11345402 - 11345353
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 524  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| ||||    
T  11345402 aattacactcccctcccctcttatgttaaaatatacactcccctcccttg 11345353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 564
Target Start/End: Complemental strand, 40036439 - 40036350
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataagacacttg 564  Q
    ||||||| || ||||| || ||||||||||||||||||||||||| |||| |  ||| |||  |||||| ||| |||||||||| |||||    
T  40036439 aattacattcccctcccctcttatgttaaaatatacactcccctcccttgcaaagtaaaatttatactcccctcccctataagatacttg 40036350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 18365324 - 18365280
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  18365324 aattacactcccctcccctcttatgttaaaatatacactcccctc 18365280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 22518639 - 22518579
Alignment:
Q  459 ttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||| |||||||||   |||| || ||||||||||||||||||| |||||    
T  22518639 ttctaagagaatcttgaattacacttctctcccctcttatgttaaaatatacacttccctc 22518579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 32737214 - 32737170
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||    
T  32737214 aattacactttcctccccttttaagttaaaatatacactcccctc 32737170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 45241234 - 45241278
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||    
T  45241234 aattacactcccctcctctcttatgttaaaatatacactctcctc 45241278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 519
Target Start/End: Complemental strand, 49080688 - 49080608
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||||| |  ||| | |||  ||| ||||||| || ||||| || |||||||||||||||||||||||||    
T  49080688 gagtaaattacactctcctcctctcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacactcccctc 49080608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 2756650 - 2756607
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccct 518  Q
    |||||||||| ||||| || ||||||||||||||||||||||||    
T  2756650 aattacactcccctcccctcttatgttaaaatatacactcccct 2756607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 3090461 - 3090410
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||| ||||| ||||| || ||||||||||||||||||||||||| ||||||    
T  3090461 aattgcactcccctcccctcttatgttaaaatatacactcccctcccttgaa 3090410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 519
Target Start/End: Original strand, 5963051 - 5963134
Alignment:
Q  436 aatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||||||| ||  || | | || ||| |||| |||||  |||| || |||||||||||||||||||||||||    
T  5963051 aatgagtaaattacactctccttccctgacacaagcttgaattgcactcctctcccctcttatgttaaaatatacactcccctc 5963134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 526
Target Start/End: Original strand, 9830271 - 9830358
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| |||| |||   |||| |||| ||| ||||||||| || ||| || ||| ||||||||||||||||||||| ||||||    
T  9830271 gagtaaattatactcccttcccctaaaagaagcttgaattacactttcatcccctcttaagttaaaatatacactcccctcccttgaa 9830358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 514
Target Start/End: Original strand, 11397584 - 11397659
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 514  Q
    ||||||||||||||  |||   ||||||||| ||| |||||||||  ||||| || ||||||||||||||||||||    
T  11397584 gagtaaattacacttccttcccctaagagaagcttgaattacacttccctcccctcttatgttaaaatatacactc 11397659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 17765005 - 17764954
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||| |||| ||||| || ||||||||||||||||||||||||| ||||||    
T  17765005 aattaaactcccctcccctcttatgttaaaatatacactcccctcccttgaa 17764954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 19066325 - 19066274
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||| |||| ||||| || ||||||||||||||||||||||||| ||||||    
T  19066325 aattaaactcccctcccctcttatgttaaaatatacactcccctcccttgaa 19066274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 514
Target Start/End: Original strand, 27255318 - 27255357
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactc 514  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  27255318 aattacactctcctcccctcttatgttaaaatatacactc 27255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 41587354 - 41587303
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||  |||| || ||||||||||||||||||||||||| ||||||    
T  41587354 aattacactcctctcccctcttatgttaaaatatacactcccctcccttgaa 41587303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 53490774 - 53490723
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||  || |||| ||||||||||||||||||||||||| ||||||    
T  53490774 aattacactcatcttctctcttatgttaaaatatacactcccctcccttgaa 53490723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 54403592 - 54403643
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||| ||||||    
T  54403592 aattacactcccctcccctcttatgttaaaatatacacttccctcccttgaa 54403643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 509
Target Start/End: Complemental strand, 25259981 - 25259947
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatata 509  Q
    |||||||||| ||||||||||||||||||||||||    
T  25259981 aattacactcccctcctcttttatgttaaaatata 25259947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 513
Target Start/End: Complemental strand, 33115313 - 33115239
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||||||||||| | |||| | |||  ||| |||||||||  ||||| || |||||||||||||||||||    
T  33115313 gagtaaattacactctcctcttctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 33115239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 509
Target Start/End: Complemental strand, 33979324 - 33979290
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatata 509  Q
    ||||| |||||||||||||||||||||||||||||    
T  33979324 aattatactctcctcctcttttatgttaaaatata 33979290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 4757028 - 4757069
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||||||||| || ||| ||||||||||||||||||    
T  4757028 aattacactctcctcccctcttaagttaaaatatacactccc 4757069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 16067257 - 16067298
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||||||||| || ||||||||||||||||| ||||    
T  16067257 aattacactctcctcccctcttatgttaaaatatacattccc 16067298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 19547073 - 19547032
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  19547073 aattacactattctcctctcttatgttaaaatatacactccc 19547032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 291826 - 291782
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||| ||||||| || ||||||| |||||||||||||||||    
T  291826 aattacaccctcctcccctcttatgttcaaatatacactcccctc 291782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 519
Target Start/End: Complemental strand, 1364131 - 1364051
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||| ||| |||| | |||   || |||||||||| | ||  || |||||||||||||||||||||||||    
T  1364131 gagtaaattacactcccttcttctcaaagatgtttgaattacactcccatctcctcttatgttaaaatatacactcccctc 1364051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 1763676 - 1763720
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||||    
T  1763676 aattacactttcctccctttttatgttaaaatatacactctcctc 1763720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 3089783 - 3089827
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  3089783 aattacacttccctcccctcttatgttaaaatatacactcccctc 3089827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 4558065 - 4558109
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  4558065 aattacactcccctcccctcttaagttaaaatatacactcccctc 4558109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 513
Target Start/End: Original strand, 4757117 - 4757169
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||| ||| ||||||| |||||||| || |||||||||||| ||||||    
T  4757117 ctaagagaagcttgaattacattctcctccactcttatgttaaaatctacact 4757169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 10887743 - 10887787
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  10887743 aattacactcccctcccctcttaagttaaaatatacactcccctc 10887787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 11055824 - 11055868
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  11055824 aattacactcccctcccctcttaagttaaaatatacactcccctc 11055868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 513
Target Start/End: Complemental strand, 11389027 - 11388975
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||| ||| ||||||| |||||||| || |||||||||||| ||||||    
T  11389027 ctaagagaagcttgaattacattctcctcccctcttatgttaaaatctacact 11388975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 513
Target Start/End: Original strand, 11581989 - 11582041
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||| ||| ||||||| || |||||||| |||||||||||| ||||||    
T  11581989 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacact 11582041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 22129720 - 22129764
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  22129720 aattacactcccctcccctcttaagttaaaatatacactcccctc 22129764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 23309663 - 23309619
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| |||||||| |||  ||||||||||||||||||||    
T  23309663 aattacactcccctcctctcttaacttaaaatatacactcccctc 23309619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 27638508 - 27638552
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  |||||||||||||||||||||||| | |||||||    
T  27638508 aattacacttccctcctcttttatgttaaaatatatattcccctc 27638552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 37183111 - 37183155
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  37183111 aattacactcccctcccctcttaagttaaaatatacactcccctc 37183155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 40927526 - 40927570
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  40927526 aattacacttccctcccctcttatgttaaaatatacactcccctc 40927570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 40974069 - 40974113
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||||||||||||||||| |||||||    
T  40974069 aattacactcccctcccctcttatgttaaaatatacaatcccctc 40974113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 49079992 - 49080041
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||||||| || ||||||||||||||  ||||||||| ||||||    
T  49079992 aattacactctcctcccctcttatgttaaaatat--actcccctcccttgaa 49080041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 54606467 - 54606423
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||  || |||||||||||||||||||||||||    
T  54606467 aattacactcccctctcctcttatgttaaaatatacactcccctc 54606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 55205004 - 55204968
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatataca 511  Q
    |||||||||| | ||||||||||||||||||||||||    
T  55205004 aattacactcacatcctcttttatgttaaaatataca 55204968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 439 - 519
Target Start/End: Complemental strand, 1406315 - 1406235
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||| | || |||||||||| ||| |||||||||||| ||  || |||||||||||||||||||| ||||    
T  1406315 gagtaaattacactccccttctctaagagaagcttgaattacactctcatctcctcttatgttaaaatatacactctcctc 1406235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 439 - 513
Target Start/End: Original strand, 31849999 - 31850073
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    ||||||||||||||| | |  |||||||||  ||| |||||||||||| |||||| |||||||||||||||||||    
T  31849999 gagtaaattacactcccctcgtctaagagatgcttgaattacactctcatcctctcttatgttaaaatatacact 31850073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 4877418 - 4877374
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  4877418 aattacactctcctcccctcttatgttaaaatatacactcccctc 4877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 20570159 - 20570203
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  20570159 aattacactcccctcctctcttatgttaaaatatacactcccctc 20570203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 516
Target Start/End: Original strand, 38497324 - 38497400
Alignment:
Q  440 agtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||||||| | |  |||||||||| ||| ||||||||||| |||| || ||||||||||||||||| ||||    
T  38497324 agtaaattacactcccctcctctaagagaagcttgaattacactcttctcccctcttatgttaaaatatacattccc 38497400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 439 - 526
Target Start/End: Original strand, 13279474 - 13279561
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||| | |  |||||||||| ||| |||||||||  |||||||| |||||||||||| |||| || |||| ||||||    
T  13279474 gagtaaattacactcccctcctctaagagaagcttgaattacacttccctcctctcttatgttaaaatctacattctcctcccttgaa 13279561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 8573392 - 8573348
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||| | || |||||||||||||||||||||||||    
T  8573392 aattacactctccttccctcttatgttaaaatatacactcccctc 8573348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 19408570 - 19408614
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  19408570 aattacactcccctcccctcttatgttaaaatatacactcccctc 19408614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 27979943 - 27979899
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||| |||||| ||| |||||||||||||||||||||||||    
T  27979943 aattacaccctcctcatctcttatgttaaaatatacactcccctc 27979899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 32458556 - 32458516
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  32458556 aattacactctcctccccttttatattaaaatatacactcc 32458516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 36742625 - 36742581
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  36742625 aattacactcccctcccctcttatgttaaaatatacactcccctc 36742581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 42599031 - 42598987
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  42599031 aattacactctcctccactcttatgttaaaatatacacttccctc 42598987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 13685999 - 13686050
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||| ||| || |||||||||||||||||||| ||| |||||||    
T  13685999 aattacactctcatcccctcttatgttaaaatatacactctcctttcttgaa 13686050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 22731103 - 22731052
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| |||||  | |||||||||||||||||||||||||| |||||    
T  22731103 aattacactcccctcccttcttatgttaaaatatacactcccctcttttgaa 22731052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 27979262 - 27979313
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||| ||||||    
T  27979262 aattacactcccctcccctcttatgttaaaatatacattcccctcccttgaa 27979313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 36737492 - 36737441
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||| ||||||    
T  36737492 aattacactcccctcccctcttatgttaaaatatacacttccctcccttgaa 36737441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 519
Target Start/End: Complemental strand, 4717326 - 4717272
Alignment:
Q  465 gagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||| ||| |||||||||||| |||  | |||||||||||||||||||||||||    
T  4717326 gagaagcttgaattacactctcatcccttcttatgttaaaatatacactcccctc 4717272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 526
Target Start/End: Original strand, 8437735 - 8437825
Alignment:
Q  437 atgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacac-tcccctctcttgaa 526  Q
    ||||||||||||||||||||| |  ||||| || ||| |||||||||  ||||   | ||||||||||||||| || ||||||||||||||    
T  8437735 atgagtaaattacactctcttctcttaagaaaagcttaaattacacttccctcacttcttatgttaaaatatatacttcccctctcttgaa 8437825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 521
Target Start/End: Complemental strand, 27028684 - 27028638
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctc 521  Q
    |||||||||| |||||||| ||||||||||||||| ||||| |||||    
T  27028684 aattacactcccctcctctcttatgttaaaatatatactcctctctc 27028638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 526
Target Start/End: Original strand, 36853666 - 36853700
Alignment:
Q  492 cttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||||||||||||||||||| ||||||    
T  36853666 cttttatgttaaaatatacactcccctcccttgaa 36853700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 507
Target Start/End: Complemental strand, 2074807 - 2074726
Alignment:
Q  426 attattataaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaata 507  Q
    ||||||||  || |||||||||| |||| | ||  ||||||||| ||| |||||||||| ||||| || |||||||||||||    
T  2074807 attattatttaaagagtaaattatactccccttccctaagagaaacttgaattacactcccctcccctcttatgttaaaata 2074726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 17780340 - 17780421
Alignment:
Q  438 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||| ||||  ||| | |||  ||| |||||||||   ||||||| |||||||||||||||||||| ||||    
T  17780340 tgagtaaattacactttcttcctctcaaagatgcttgaattacactactctcctctcttatgttaaaatatacactctcctc 17780421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 519
Target Start/End: Complemental strand, 20217268 - 20217239
Alignment:
Q  490 ctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||||||||||||||||||    
T  20217268 ctcttttatgttaaaatatacactcccctc 20217239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 513
Target Start/End: Original strand, 32050598 - 32050671
Alignment:
Q  440 agtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||||||||||| | |||||| | |||  ||| |||||||||||| | |||| |||||||||||| ||||||    
T  32050598 agtaaattacactcccgttttctcaaagatgcttgaattacactctcattctctcttatgttaaaatgtacact 32050671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 511
Target Start/End: Original strand, 6029485 - 6029521
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatataca 511  Q
    |||||||||||| |||||| |||||||||||||||||    
T  6029485 aattacactctcatcctctcttatgttaaaatataca 6029521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 9017678 - 9017722
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||||||||||||||||||| |||||    
T  9017678 aattacactcccctcccctcttatgttaaaatatacacttccctc 9017722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 526
Target Start/End: Original strand, 20570192 - 20570240
Alignment:
Q  478 tacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||| ||||| || ||||||||||||||||| ||||||| ||||||    
T  20570192 tacactcccctcccctcttatgttaaaatatacattcccctcccttgaa 20570240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 20570867 - 20570831
Alignment:
Q  479 acactctcctcctcttttatgttaaaatatacactcc 515  Q
    |||||||||||| || |||||||||||||||||||||    
T  20570867 acactctcctcccctcttatgttaaaatatacactcc 20570831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 35751547 - 35751591
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| | ||| || |||||||||||||||||||||||||    
T  35751547 aattacactcccttcccctcttatgttaaaatatacactcccctc 35751591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 37658118 - 37658074
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  37658118 aattacactcccctcccctcttaagttaaaatatacactcccctc 37658074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 13482214 - 13482265
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  13482214 aattacactctcctcccctcttatgttaaaatatacactcccctcccttgaa 13482265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 29429780 - 29429697
Alignment:
Q  438 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctc 521  Q
    |||||||||| ||||| | ||  ||||||||  ||| |||||||||||||| |||| ||||||||||||||||||| |||||||    
T  29429780 tgagtaaattgcactccccttccctaagagatgcttgaattacactctccttctctcttatgttaaaatatacacttccctctc 29429697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 16192359 - 16192310
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 524  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  16192359 aattacactcccctcctctcttatgttaaaatatacactcccctcacttg 16192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 526
Target Start/End: Original strand, 51019668 - 51019733
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||  ||| |||||||||||||||| || ||||||||||||||||||| ||||| ||||||    
T  51019668 ctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacacttccctcccttgaa 51019733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 526
Target Start/End: Complemental strand, 54096757 - 54096708
Alignment:
Q  477 ttacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  54096757 ttacactctcctccccttttatgttaaaatatacactcccatcccttgaa 54096708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 526
Target Start/End: Original strand, 21037316 - 21037380
Alignment:
Q  462 taagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||| ||| |||||||||| |||||||| |||||||||||||||||||  |||| ||||||    
T  21037316 taagagaagcttgaattacactcccctcctctcttatgttaaaatatacactttcctcccttgaa 21037380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 26705713 - 26705669
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  26705713 aattacactcccctcctctcttatgttaaaatatacactcccctc 26705669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 17730224 - 17730173
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||||||||  |||||||||||||||||||||| ||||| ||||||    
T  17730224 aattacactctcctctccttttatgttaaaatatacactaccctcccttgaa 17730173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 36898143 - 36898092
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||  |||||||||||||||||||||||||||| ||||||    
T  36898143 aattacactcccctctccttttatgttaaaatatacactcccctcccttgaa 36898092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 41919952 - 41919909
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccct 518  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  41919952 aattacactcttctcctctcttatgttaaaatatacactcccct 41919909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 55815041 - 55814990
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||    
T  55815041 aattacactctcctcctctcttacgttaaaatatacactcctctcccttgaa 55814990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 4949965 - 4950006
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  4949965 aattacactcccctcctctcttatgttaaaatatacactccc 4950006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 524
Target Start/End: Original strand, 55068874 - 55068923
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 524  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| ||||    
T  55068874 aattacactcccctcccctcttatgttaaaatatacactcccctcccttg 55068923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 56310110 - 56310073
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacac 512  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  56310110 aattacactctcctcctctcttatgttaaaatatacac 56310073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 17722781 - 17722825
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  17722781 aattacactcccctcccctcttatgttaaaatatacactcccctc 17722825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 19313376 - 19313420
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  19313376 aattacactctcatcccctcttatgttaaaatatacactcccctc 19313420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 25010101 - 25010061
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  25010101 aattacactctcctcccctcttatgttaaaatatacactcc 25010061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 30192540 - 30192584
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  30192540 aattacactctcctcccctcttatgttaaaatatacacttccctc 30192584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 35667327 - 35667283
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  35667327 aattacactcccctcccctcttatgttaaaatatacactcccctc 35667283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 35667610 - 35667566
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| |||||| || |||||||||||||||||||||||||    
T  35667610 aattacactttcctcccctcttatgttaaaatatacactcccctc 35667566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 44665229 - 44665185
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||| ||| ||||| ||||||||||||||||||||||||||||    
T  44665229 aattacgctcccctccccttttatgttaaaatatacactcccctc 44665185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 46095437 - 46095481
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  46095437 aattacactctcctcccctcttaagttaaaatatacactcccctc 46095481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 47030526 - 47030482
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  47030526 aattacactctcctcccctcttaagttaaaatatacactcccctc 47030482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 23722095 - 23722044
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||| ||||||    
T  23722095 aattacactcccctcccctcttatgttaaaatatacactaccctcccttgaa 23722044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 558
Target Start/End: Complemental strand, 38720663 - 38720580
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||||| |||||| |||||||||||||||||||  |||| |||| |  ||| |||  | |||| ||||||||||||||    
T  38720663 aattacactctcatcctctcttatgttaaaatatacactttcctcccttgtaaagtaaaatctacactccccttccctataaga 38720580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 517
Target Start/End: Complemental strand, 35667800 - 35667758
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccc 517  Q
    |||||||||| ||||| || |||||||||||||||||||||||    
T  35667800 aattacactcccctcccctcttatgttaaaatatacactcccc 35667758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 517
Target Start/End: Original strand, 37423811 - 37423853
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccc 517  Q
    |||||||||| ||||| || |||||||||||||||||||||||    
T  37423811 aattacactcccctcccctcttatgttaaaatatacactcccc 37423853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 521
Target Start/End: Complemental strand, 45847799 - 45847765
Alignment:
Q  487 ctcctcttttatgttaaaatatacactcccctctc 521  Q
    ||||||| |||||||||||||||||||||||||||    
T  45847799 ctcctctcttatgttaaaatatacactcccctctc 45847765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 13772426 - 13772389
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacac 512  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  13772426 aattacactctcatcctctcttatgttaaaatatacac 13772389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 17723463 - 17723426
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacac 512  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  17723463 aattacactcccctccccttttatgttaaaatatacac 17723426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 20545099 - 20545018
Alignment:
Q  438 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| | |   || |||||  ||| |||||||||| ||||| || ||||||||||||||||| |||||||    
T  20545099 tgagtaaattacactcccctcccctcagagatgcttgaattacactcccctcccctcttatgttaaaatatacattcccctc 20545018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 33047273 - 33047232
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||| ||||| || ||||||||||||||||||||||    
T  33047273 aattacactcccctcccctcttatgttaaaatatacactccc 33047232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 796414 - 796458
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  796414 aattacactcccctcccctcttaagttaaaatatacactcccctc 796458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 6233147 - 6233103
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  6233147 aattacactcccctcccctcttaagttaaaatatacactcccctc 6233103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 7166122 - 7166078
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  |||||||| ||| |||||||||||||||||||||    
T  7166122 aattacacttccctcctctcttaagttaaaatatacactcccctc 7166078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 8193034 - 8192990
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  8193034 aattacactcccctcccctcttaagttaaaatatacactcccctc 8192990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 10155534 - 10155578
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||||  ||||| ||||||||||||||| |||||    
T  10155534 aattacactctcctccctttttaagttaaaatatacacttccctc 10155578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 13771749 - 13771793
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| || ||| || |||||||||||||||||||||||||    
T  13771749 aattacactttcatcccctcttatgttaaaatatacactcccctc 13771793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 16960236 - 16960280
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  16960236 aattacacttccctcccctcttatgttaaaatatacactcccctc 16960280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 470 - 526
Target Start/End: Complemental strand, 16960923 - 16960867
Alignment:
Q  470 tctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||| ||||| |||| ||||  || ||||||||||||||||||||| ||||||||||    
T  16960923 tcttgaattatactcccctctcctcttatgttaaaatatacactcctctctcttgaa 16960867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 37708806 - 37708850
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||  |||| || |||||||||||||||||||||||||    
T  37708806 aattacactcctctcccctcttatgttaaaatatacactcccctc 37708850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 51268593 - 51268553
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  51268593 aattacactcctctcctctcttatgttaaaatatacactcc 51268553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 519
Target Start/End: Complemental strand, 794794 - 794747
Alignment:
Q  472 tttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  794794 tttaattacactctcctcccctcttatgttaaaatatacactcccctc 794747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 8061056 - 8061099
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccct 518  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  8061056 aattacactctcctcctctcttatgttaaaatatacactcccct 8061099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 526
Target Start/End: Original strand, 27225692 - 27225757
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||  ||| |||||||||||||||| || ||||||||||||||||||| ||||| ||||||    
T  27225692 ctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacacttccctcccttgaa 27225757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 51362530 - 51362486
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  51362530 aattacactttcctccccttttatgttaaaatatacactcccctc 51362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 16536402 - 16536453
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| ||||||    
T  16536402 aattacactcccctcccctcttatgttaaaatatacactcccctcccttgaa 16536453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 18406560 - 18406611
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||| ||||||    
T  18406560 aattacactcccctcctctcttatgttaaaatatacactaccctcccttgaa 18406611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 558
Target Start/End: Original strand, 45738030 - 45738113
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||||||||| || ||||||||||||||||||| ||||| ||| ||  ||| |||  |||||| ||| ||||||||||    
T  45738030 aattacactctcctcccctcttatgttaaaatatacacttccctcccttaaaaagtaaaatttatactcccctcccctataaga 45738113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 19071742 - 19071783
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  19071742 aattacactctcctcccctcttatgttaaaatatacactccc 19071783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 19119632 - 19119673
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  19119632 aattacactctcctcccctcttatgttaaaatatacactccc 19119673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 9091067 - 9091111
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||    
T  9091067 aattacattcccctccccttttatgttaaaatatacactcccctc 9091111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 18407245 - 18407201
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||||||||||||||||| |||||||    
T  18407245 aattacactctcctcccctcttatgttaaaatatacattcccctc 18407201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 19072402 - 19072358
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||    
T  19072402 aattacactcccctcctctcttatattaaaatatacactcccctc 19072358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 19120292 - 19120248
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||    
T  19120292 aattacactcccctcctctcttatattaaaatatacactcccctc 19120248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 41321543 - 41321587
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  41321543 aattacactctcctcccctcttaagttaaaatatacactcccctc 41321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 41575886 - 41575842
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  41575886 aattacactctcctcccctcttatgttaaaatatacacttccctc 41575842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 41576055 - 41576011
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||| || |||||||||||||||||||||||||||| |||||    
T  41576055 aattacattcccctcctcttttatgttaaaatatacacttccctc 41576011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 42831245 - 42831201
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  42831245 aattacactcccctccgctcttatgttaaaatatacactcccctc 42831201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 558
Target Start/End: Original strand, 4007583 - 4007666
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||||||||| || |||||||||||||||||| || |||  |||||  ||| |||  ||||||  |||||||||||||    
T  4007583 aattacactctcctcccctcttatgttaaaatatacacccctctcctttgaaaagtaaaatttatactcctcttccctataaga 4007666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 43320621 - 43320570
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| |||||||||||||||||| ||| ||||| ||||||    
T  43320621 aattacactcccctccccttttatgttaaaatatagacttccctcccttgaa 43320570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 558
Target Start/End: Original strand, 44645291 - 44645374
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaagggtagaatgcatactctccttccctataaga 558  Q
    |||||||||||| |||||| |||||||||||||||||||  |||| |||| |  ||| |||  | |||| ||||||||||||||    
T  44645291 aattacactctcatcctctcttatgttaaaatatacactttcctcccttgtaaagtaaaatctacactccccttccctataaga 44645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 45737335 - 45737386
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || |||||||||||||||||||| |||| ||||||    
T  45737335 aattacactcccctcccctcttatgttaaaatatacactctcctcccttgaa 45737386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 50143415 - 50143466
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||| ||||||    
T  50143415 aattacactcccctcccctcttatgttaaaatatacattcccctcccttgaa 50143466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 513
Target Start/End: Complemental strand, 1114962 - 1114888
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||||||| |||  ||| ||||||||||   || |||||||||| ||||| || |||||||||||||||||||    
T  1114962 gagtaaattatactaccttcttctaagagatgtttgaattacactcccctcccctcttatgttaaaatatacact 1114888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 519
Target Start/End: Complemental strand, 9998056 - 9997998
Alignment:
Q  461 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| ||| |||||| ||  ||||| || |||||||||||||||||||||||||    
T  9998056 ctaagagaagcttgaattacccttccctcccctcttatgttaaaatatacactcccctc 9997998  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 513
Target Start/End: Original strand, 29344551 - 29344589
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||||||||||||| || |||||||||||||||||||    
T  29344551 aattacactctcctcccctcttatgttaaaatatacact 29344589  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 31766032 - 31766002
Alignment:
Q  489 cctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||||||||||||||||||    
T  31766032 cctcttttatgttaaaatatacactcccctc 31766002  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 519
Target Start/End: Original strand, 47553169 - 47553211
Alignment:
Q  477 ttacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||| || ||||||||||||||||| |||||||    
T  47553169 ttacactctcctcccctcttatgttaaaatatacattcccctc 47553211  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 516
Target Start/End: Complemental strand, 47233794 - 47233717
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactccc 516  Q
    |||||||||||||||   |||| |||||||  ||| ||||||| || ||| |||| ||||||||||||||||| ||||    
T  47233794 gagtaaattacactccacttttttaagagatgcttgaattacattccccttctctcttatgttaaaatatacattccc 47233717  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 50144132 - 50144051
Alignment:
Q  438 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||||| |   || | |||  ||| |||||||||||| ||| || |||||||||||||||||||| ||||    
T  50144132 tgagtaaattacactctcctcccctcaaagatacttgaattacactctcatcccctcttatgttaaaatatacactctcctc 50144051  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 11916481 - 11916525
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||    
T  11916481 aattacactcccctcctttattatgttaaaatatacacttccctc 11916525  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 11917162 - 11917126
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatataca 511  Q
    ||||||||||||||||| || ||||||||||||||||    
T  11917162 aattacactctcctcctattctatgttaaaatataca 11917126  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 526
Target Start/End: Original strand, 17109350 - 17109386
Alignment:
Q  490 ctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  17109350 ctctcttatgttaaaatatacactcccctcccttgaa 17109386  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 29510522 - 29510478
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||| | || |||||||||||||||||||||||||    
T  29510522 aattacactccccttccctcttatgttaaaatatacactcccctc 29510478  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 38011897 - 38011853
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  38011897 aattacactcccctccactcttaagttaaaatatacactcccctc 38011853  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 43319946 - 43319990
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||  |||||||||||||||||||| |||||||    
T  43319946 aattacactcccctctccttttatgttaaaatatacattcccctc 43319990  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 43504502 - 43504462
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcc 515  Q
    ||||| |||||||||| || |||||||||||||||||||||    
T  43504502 aattatactctcctcccctcttatgttaaaatatacactcc 43504462  T

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Target: scaffold0115 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 31397 - 31353
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  31397 aattacactttcctccccttttatgttaaaatatacactcccctc 31353  T

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Target: scaffold0189 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 11320 - 11371
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    ||||||||| |||||| || ||||||||||||||||||||||||| ||||||    
T  11320 aattacactttcctcccctcttatgttaaaatatacactcccctcccttgaa 11371  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 11673 - 11622
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || |||||||||| |||||||||||||||||||||    
T  11673 aattacactcacctcccctcttatgttaaattatacactcccctctcttgaa 11622  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 439 - 518
Target Start/End: Original strand, 25901 - 25980
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccct 518  Q
    ||||||||||||||| | | | ||||||||| ||| ||||||||||| |||   | ||||||||||||||||||||||||    
T  25901 gagtaaattacactcccctctcctaagagaagcttgaattacactctactctcatcttatgttaaaatatacactcccct 25980  T

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Target: scaffold0368 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 11301 - 11257
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  11301 aattacactcccctccgctcttatgttaaaatatacactcccctc 11257  T

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Target: scaffold0289 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 3439 - 3483
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||| ||||||| || |||||||||||||||||||||||||    
T  3439 aattacacactcctcccctcttatgttaaaatatacactcccctc 3483  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 421178 - 421222
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  421178 aattacactcccctcccctcttatgttaaaatatacactcccctc 421222  T

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Target: scaffold0695 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 2254 - 2305
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgaa 526  Q
    |||||||||| ||||| || |||||||||||| |||||||||||| ||||||    
T  2254 aattacactcccctcccctcttatgttaaaatttacactcccctcccttgaa 2305  T

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Target: scaffold0695; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 519
Target Start/End: Complemental strand, 2969 - 2889
Alignment:
Q  439 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||||||||||||   || | |||  ||| ||||||||||  ||| ||| ||| |||||||||||||||||||||    
T  2969 gagtaaattacactctcttccccttaaagatgcttaaattacactcctctcatctcttaagttaaaatatacactcccctc 2889  T

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Target: scaffold0340 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 12903 - 12860
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccct 518  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||    
T  12903 aattacactctcttcctctcttatgttaaaatatacattcccct 12860  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 513
Target Start/End: Original strand, 67707 - 67784
Alignment:
Q  436 aatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 513  Q
    |||||| ||||||||||| | ||  ||||||||| | | |||||||||| ||||| || ||||| |||||||||||||    
T  67707 aatgagaaaattacactccccttccctaagagaaacatgaattacactcccctcccctcttatgataaaatatacact 67784  T

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Target: scaffold2113 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 757 - 801
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  757 aattacactcccctccactcttaagttaaaatatacactcccctc 801  T

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Target: scaffold0105 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 19690 - 19646
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  19690 aattacactcccctcccctcttaagttaaaatatacactcccctc 19646  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 161288 - 161332
Alignment:
Q  475 aattacactctcctcctcttttatgttaaaatatacactcccctc 519  Q
    ||||||||| | |||| || |||||||||||||||||||||||||    
T  161288 aattacacttttctcccctcttatgttaaaatatacactcccctc 161332  T

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