View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13306_low_14 (Length: 365)

Name: NF13306_low_14
Description: NF13306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13306_low_14
NF13306_low_14
[»] chr5 (49 HSPs)
chr5 (30-350)||(37397454-37397780)
chr5 (23-103)||(5067295-5067375)
chr5 (30-103)||(13108579-13108652)
chr5 (30-103)||(32059570-32059643)
chr5 (30-98)||(4603776-4603844)
chr5 (23-103)||(25586926-25587006)
chr5 (19-105)||(23270641-23270727)
chr5 (30-103)||(22392695-22392768)
chr5 (20-98)||(15971242-15971320)
chr5 (30-96)||(38684209-38684275)
chr5 (30-103)||(13038584-13038657)
chr5 (30-103)||(15641235-15641308)
chr5 (30-103)||(31288076-31288149)
chr5 (30-103)||(34049816-34049889)
chr5 (30-98)||(8484791-8484859)
chr5 (30-98)||(36954817-36954885)
chr5 (30-98)||(38631091-38631159)
chr5 (19-91)||(42193491-42193563)
chr5 (23-98)||(10399772-10399847)
chr5 (39-98)||(25750750-25750809)
chr5 (35-98)||(27487690-27487753)
chr5 (21-103)||(1827651-1827733)
chr5 (24-98)||(22253269-22253343)
chr5 (30-103)||(6014410-6014482)
chr5 (30-95)||(10869695-10869760)
chr5 (30-103)||(11926632-11926705)
chr5 (30-103)||(34310136-34310209)
chr5 (30-98)||(19145541-19145609)
chr5 (20-103)||(28614604-28614686)
chr5 (30-93)||(33709631-33709694)
chr5 (48-106)||(3715057-3715115)
chr5 (30-80)||(12398578-12398628)
chr5 (30-103)||(27498861-27498934)
chr5 (30-103)||(30485822-30485895)
chr5 (23-103)||(11465030-11465110)
chr5 (24-84)||(16616132-16616192)
chr5 (30-85)||(37495059-37495114)
chr5 (53-103)||(204177-204227)
chr5 (50-104)||(12317300-12317354)
chr5 (30-98)||(930615-930683)
chr5 (30-102)||(2499308-2499380)
chr5 (30-103)||(15931053-15931126)
chr5 (31-80)||(19456340-19456389)
chr5 (30-73)||(18207231-18207274)
chr5 (24-98)||(8780477-8780551)
chr5 (48-98)||(42006792-42006842)
chr5 (243-292)||(26603928-26603977)
chr5 (23-74)||(31074262-31074314)
chr5 (39-103)||(33025474-33025538)
[»] scaffold0015 (1 HSPs)
scaffold0015 (106-348)||(21854-22115)
[»] chr8 (41 HSPs)
chr8 (24-103)||(24018380-24018459)
chr8 (30-103)||(3734753-3734826)
chr8 (30-103)||(28193472-28193545)
chr8 (30-104)||(18532104-18532178)
chr8 (30-103)||(32879277-32879350)
chr8 (30-103)||(34237785-34237858)
chr8 (30-103)||(42643248-42643321)
chr8 (30-98)||(27746465-27746533)
chr8 (30-103)||(4718643-4718716)
chr8 (30-103)||(20305906-20305979)
chr8 (30-103)||(21092539-21092612)
chr8 (29-98)||(21667553-21667622)
chr8 (30-103)||(39349254-39349327)
chr8 (30-98)||(264529-264597)
chr8 (30-98)||(651324-651392)
chr8 (30-98)||(837059-837127)
chr8 (30-98)||(15259536-15259604)
chr8 (30-98)||(19471612-19471680)
chr8 (30-98)||(19542536-19542604)
chr8 (30-98)||(19590092-19590160)
chr8 (30-98)||(34694706-34694774)
chr8 (30-104)||(2618183-2618257)
chr8 (31-98)||(8042657-8042724)
chr8 (23-105)||(7558066-7558148)
chr8 (30-90)||(21603241-21603301)
chr8 (50-98)||(36848899-36848947)
chr8 (31-98)||(34639337-34639404)
chr8 (30-80)||(14632975-14633025)
chr8 (30-104)||(28088283-28088357)
chr8 (30-103)||(26168978-26169051)
chr8 (243-304)||(32108222-32108283)
chr8 (30-95)||(41070767-41070832)
chr8 (30-103)||(2166695-2166770)
chr8 (30-74)||(20469944-20469988)
chr8 (50-98)||(28908824-28908872)
chr8 (34-98)||(39317023-39317087)
chr8 (30-98)||(42328008-42328075)
chr8 (302-349)||(32108309-32108356)
chr8 (30-74)||(8765656-8765700)
chr8 (54-113)||(24999230-24999287)
chr8 (50-98)||(28964036-28964084)
[»] chr3 (49 HSPs)
chr3 (30-104)||(48977381-48977455)
chr3 (30-103)||(40133579-40133652)
chr3 (19-103)||(7485644-7485728)
chr3 (30-104)||(30257617-30257691)
chr3 (30-103)||(21362937-21363010)
chr3 (30-103)||(25289844-25289917)
chr3 (30-103)||(40940819-40940892)
chr3 (30-104)||(45529884-45529958)
chr3 (30-103)||(7470345-7470418)
chr3 (30-103)||(30807283-30807356)
chr3 (30-103)||(35492905-35492978)
chr3 (30-103)||(46576342-46576415)
chr3 (30-98)||(25344187-25344255)
chr3 (30-98)||(25379760-25379828)
chr3 (233-305)||(29515552-29515624)
chr3 (30-98)||(52821765-52821833)
chr3 (30-98)||(53424306-53424374)
chr3 (30-103)||(8456280-8456353)
chr3 (23-96)||(26174114-26174187)
chr3 (30-103)||(34492705-34492778)
chr3 (30-98)||(52455779-52455847)
chr3 (30-105)||(18177017-18177092)
chr3 (29-103)||(29915398-29915472)
chr3 (29-103)||(29964551-29964625)
chr3 (23-100)||(11390599-11390676)
chr3 (24-93)||(32151428-32151497)
chr3 (30-103)||(49258392-49258465)
chr3 (23-104)||(50582985-50583066)
chr3 (30-90)||(9853623-9853683)
chr3 (30-90)||(26108299-26108359)
chr3 (23-83)||(49167070-49167130)
chr3 (30-93)||(15566629-15566692)
chr3 (23-85)||(53234033-53234095)
chr3 (30-103)||(31537968-31538041)
chr3 (30-103)||(45272546-45272619)
chr3 (23-103)||(38732960-38733040)
chr3 (48-103)||(9842915-9842970)
chr3 (30-103)||(25017510-25017582)
chr3 (19-104)||(51532782-51532867)
chr3 (30-103)||(55371415-55371488)
chr3 (30-98)||(4462632-4462700)
chr3 (50-105)||(4252546-4252601)
chr3 (23-74)||(39041975-39042026)
chr3 (31-102)||(50195410-50195481)
chr3 (53-98)||(24703703-24703748)
chr3 (30-83)||(53288842-53288895)
chr3 (30-103)||(55287797-55287870)
chr3 (63-99)||(26535036-26535072)
chr3 (34-98)||(36660769-36660833)
[»] chr1 (45 HSPs)
chr1 (30-103)||(46607804-46607877)
chr1 (19-103)||(27454985-27455069)
chr1 (23-98)||(1378744-1378819)
chr1 (19-103)||(7197365-7197449)
chr1 (23-103)||(8077641-8077721)
chr1 (30-105)||(4621367-4621442)
chr1 (30-103)||(24674387-24674460)
chr1 (23-103)||(15059525-15059605)
chr1 (30-105)||(29057467-29057542)
chr1 (24-98)||(52135129-52135203)
chr1 (30-103)||(34778336-34778409)
chr1 (30-98)||(46113532-46113600)
chr1 (23-106)||(1378889-1378972)
chr1 (19-98)||(2272343-2272422)
chr1 (30-84)||(17935782-17935836)
chr1 (30-104)||(20487320-20487394)
chr1 (30-103)||(7766857-7766930)
chr1 (29-98)||(37349522-37349591)
chr1 (23-103)||(18646847-18646927)
chr1 (19-103)||(23734110-23734194)
chr1 (19-103)||(23741302-23741386)
chr1 (30-98)||(24122022-24122090)
chr1 (30-98)||(24216977-24217045)
chr1 (30-104)||(168194-168268)
chr1 (30-103)||(32729539-32729612)
chr1 (30-103)||(23232395-23232468)
chr1 (30-103)||(30677170-30677243)
chr1 (30-82)||(37351591-37351643)
chr1 (30-85)||(7578421-7578476)
chr1 (30-80)||(33905640-33905690)
chr1 (30-103)||(21726723-21726796)
chr1 (30-103)||(25496618-25496691)
chr1 (59-99)||(1095154-1095194)
chr1 (67-103)||(8879260-8879296)
chr1 (52-104)||(47091683-47091735)
chr1 (29-84)||(8779865-8779920)
chr1 (23-74)||(9500478-9500529)
chr1 (32-109)||(1138567-1138644)
chr1 (30-103)||(7946838-7946911)
chr1 (255-304)||(36321861-36321910)
chr1 (30-79)||(45859173-45859222)
chr1 (30-98)||(1818733-1818801)
chr1 (45-93)||(6776148-6776196)
chr1 (50-98)||(9926298-9926346)
chr1 (23-83)||(19034509-19034569)
[»] scaffold0576 (1 HSPs)
scaffold0576 (30-103)||(5212-5285)
[»] scaffold0240 (1 HSPs)
scaffold0240 (30-103)||(12884-12957)
[»] scaffold0217 (1 HSPs)
scaffold0217 (30-103)||(7439-7512)
[»] scaffold0068 (1 HSPs)
scaffold0068 (30-103)||(41774-41847)
[»] chr7 (56 HSPs)
chr7 (30-103)||(2751269-2751342)
chr7 (30-103)||(10091186-10091259)
chr7 (19-103)||(21217952-21218036)
chr7 (23-98)||(8435818-8435893)
chr7 (30-104)||(2344296-2344370)
chr7 (30-104)||(40543040-40543114)
chr7 (30-103)||(7175992-7176065)
chr7 (30-103)||(7275275-7275348)
chr7 (30-103)||(23854394-23854467)
chr7 (30-98)||(2103058-2103126)
chr7 (30-98)||(22119891-22119959)
chr7 (30-103)||(18044105-18044178)
chr7 (30-103)||(22638290-22638363)
chr7 (30-103)||(27312150-27312223)
chr7 (30-98)||(7799962-7800030)
chr7 (23-103)||(17212051-17212131)
chr7 (30-98)||(21835154-21835222)
chr7 (23-103)||(40332097-40332177)
chr7 (30-104)||(31197588-31197662)
chr7 (30-103)||(11997847-11997920)
chr7 (30-103)||(28646967-28647040)
chr7 (30-103)||(32849589-32849662)
chr7 (30-98)||(13332553-13332621)
chr7 (31-103)||(25333417-25333489)
chr7 (31-103)||(27009357-27009429)
chr7 (23-98)||(12211658-12211733)
chr7 (31-98)||(28089819-28089886)
chr7 (29-92)||(42913642-42913705)
chr7 (18-98)||(3951108-3951189)
chr7 (30-84)||(22703503-22703557)
chr7 (48-98)||(28003839-28003889)
chr7 (23-105)||(31713018-31713100)
chr7 (29-98)||(19421234-19421303)
chr7 (30-98)||(21574233-21574301)
chr7 (30-85)||(22299865-22299920)
chr7 (48-103)||(39145800-39145855)
chr7 (30-108)||(17197080-17197158)
chr7 (32-98)||(23330871-23330937)
chr7 (29-98)||(1469115-1469184)
chr7 (30-103)||(21370595-21370668)
chr7 (29-98)||(27704005-27704074)
chr7 (30-79)||(31273936-31273985)
chr7 (30-103)||(43785429-43785502)
chr7 (30-98)||(9718117-9718185)
chr7 (30-94)||(22696327-22696391)
chr7 (50-98)||(42814867-42814915)
chr7 (51-85)||(24686132-24686166)
chr7 (37-98)||(9683829-9683890)
chr7 (186-238)||(16650692-16650745)
chr7 (243-304)||(16650775-16650836)
chr7 (186-238)||(17625052-17625105)
chr7 (243-304)||(17625135-17625196)
chr7 (30-82)||(14199796-14199848)
chr7 (30-98)||(23012638-23012706)
chr7 (50-86)||(31481062-31481098)
chr7 (30-98)||(36173038-36173106)
[»] chr6 (32 HSPs)
chr6 (30-103)||(11007159-11007232)
chr6 (30-103)||(12591631-12591704)
chr6 (30-103)||(15360228-15360301)
chr6 (30-104)||(9238968-9239042)
chr6 (23-97)||(11448871-11448945)
chr6 (23-98)||(8479311-8479386)
chr6 (23-98)||(9843937-9844012)
chr6 (30-103)||(654276-654349)
chr6 (23-104)||(13753233-13753314)
chr6 (30-103)||(22576061-22576134)
chr6 (23-103)||(33718581-33718661)
chr6 (30-103)||(9208246-9208319)
chr6 (30-103)||(28672061-28672134)
chr6 (30-103)||(34147340-34147413)
chr6 (30-103)||(34159956-34160029)
chr6 (30-98)||(21982450-21982518)
chr6 (30-103)||(3222765-3222837)
chr6 (30-103)||(3625868-3625941)
chr6 (34-103)||(33499468-33499537)
chr6 (186-238)||(3386570-3386623)
chr6 (30-103)||(5360201-5360274)
chr6 (243-304)||(11117028-11117089)
chr6 (243-304)||(22961764-22961825)
chr6 (243-304)||(23826568-23826629)
chr6 (30-98)||(14212891-14212959)
chr6 (48-104)||(17081202-17081258)
chr6 (30-82)||(17706437-17706489)
chr6 (250-304)||(3386479-3386533)
chr6 (29-95)||(9690767-9690833)
chr6 (30-98)||(1344936-1345002)
chr6 (54-103)||(21148664-21148713)
chr6 (24-80)||(28968166-28968222)
[»] chr4 (46 HSPs)
chr4 (30-103)||(25852208-25852281)
chr4 (29-104)||(46714385-46714460)
chr4 (23-105)||(40058975-40059057)
chr4 (34-103)||(54127476-54127545)
chr4 (19-103)||(19660651-19660735)
chr4 (30-98)||(51535612-51535680)
chr4 (30-104)||(52983612-52983686)
chr4 (30-103)||(1985830-1985903)
chr4 (34-103)||(32986191-32986260)
chr4 (23-104)||(34844881-34844962)
chr4 (30-98)||(13873425-13873493)
chr4 (19-99)||(32942368-32942448)
chr4 (30-98)||(42245745-42245813)
chr4 (30-93)||(35229172-35229235)
chr4 (19-98)||(45787823-45787901)
chr4 (24-98)||(43719189-43719263)
chr4 (30-103)||(22625200-22625273)
chr4 (30-95)||(27528925-27528990)
chr4 (34-103)||(33696413-33696482)
chr4 (30-103)||(35674871-35674944)
chr4 (23-103)||(5609325-5609405)
chr4 (30-98)||(34835528-34835596)
chr4 (48-103)||(34722164-34722219)
chr4 (30-80)||(7392093-7392143)
chr4 (48-98)||(20566348-20566398)
chr4 (30-103)||(44343507-44343581)
chr4 (23-96)||(43352447-43352520)
chr4 (186-309)||(27907705-27907828)
chr4 (23-103)||(33992620-33992700)
chr4 (23-83)||(49287872-49287932)
chr4 (243-304)||(31293010-31293071)
chr4 (30-103)||(36131640-36131713)
chr4 (48-97)||(55961890-55961939)
chr4 (30-90)||(2351020-2351080)
chr4 (30-98)||(13584384-13584452)
chr4 (20-84)||(18875636-18875700)
chr4 (30-98)||(40252297-40252365)
chr4 (23-103)||(41621719-41621799)
chr4 (20-99)||(9646336-9646415)
chr4 (19-98)||(41085025-41085104)
chr4 (19-73)||(51961899-51961953)
chr4 (37-98)||(13550207-13550268)
chr4 (30-79)||(20078114-20078163)
chr4 (56-96)||(10125783-10125823)
chr4 (20-104)||(13771603-13771687)
chr4 (23-98)||(39343473-39343548)
[»] chr2 (36 HSPs)
chr2 (30-103)||(15037953-15038026)
chr2 (30-103)||(44946183-44946256)
chr2 (30-105)||(25293158-25293233)
chr2 (34-103)||(11941344-11941413)
chr2 (30-98)||(4852557-4852625)
chr2 (30-104)||(18976555-18976629)
chr2 (30-103)||(33827703-33827776)
chr2 (34-98)||(40997484-40997548)
chr2 (30-98)||(44976284-44976352)
chr2 (30-103)||(24195998-24196071)
chr2 (30-98)||(8192481-8192549)
chr2 (30-98)||(17324765-17324833)
chr2 (23-103)||(30466953-30467033)
chr2 (30-85)||(27290600-27290655)
chr2 (30-105)||(32845083-32845158)
chr2 (30-84)||(10582120-10582174)
chr2 (20-73)||(29361578-29361630)
chr2 (23-103)||(36390691-36390769)
chr2 (30-103)||(41313986-41314059)
chr2 (23-98)||(4567560-4567635)
chr2 (23-98)||(14946778-14946853)
chr2 (30-80)||(5394034-5394084)
chr2 (30-103)||(6714411-6714484)
chr2 (19-103)||(20297557-20297642)
chr2 (30-103)||(32526215-32526288)
chr2 (50-98)||(918849-918897)
chr2 (30-98)||(18691981-18692049)
chr2 (30-98)||(19054024-19054092)
chr2 (30-98)||(41329842-41329910)
chr2 (30-81)||(34516538-34516589)
chr2 (30-96)||(1845787-1845853)
chr2 (29-95)||(4618814-4618880)
chr2 (45-103)||(27269495-27269553)
chr2 (30-80)||(43374455-43374505)
chr2 (31-81)||(44610090-44610140)
chr2 (30-98)||(38784309-38784377)
[»] scaffold0199 (1 HSPs)
scaffold0199 (23-103)||(8530-8610)
[»] scaffold0459 (1 HSPs)
scaffold0459 (23-98)||(10816-10891)
[»] scaffold0366 (2 HSPs)
scaffold0366 (23-98)||(12123-12198)
scaffold0366 (30-98)||(9429-9497)
[»] scaffold0049 (1 HSPs)
scaffold0049 (30-103)||(66756-66829)
[»] scaffold0026 (1 HSPs)
scaffold0026 (30-103)||(97496-97569)
[»] scaffold0623 (1 HSPs)
scaffold0623 (30-98)||(1186-1254)
[»] scaffold0028 (1 HSPs)
scaffold0028 (30-105)||(27768-27843)
[»] scaffold0460 (1 HSPs)
scaffold0460 (30-104)||(8309-8383)
[»] scaffold0328 (1 HSPs)
scaffold0328 (34-103)||(14985-15054)
[»] scaffold0070 (1 HSPs)
scaffold0070 (30-103)||(40319-40392)
[»] scaffold0051 (1 HSPs)
scaffold0051 (30-98)||(53001-53069)
[»] scaffold0717 (1 HSPs)
scaffold0717 (30-92)||(88-150)
[»] scaffold0019 (1 HSPs)
scaffold0019 (30-74)||(161832-161876)
[»] scaffold0086 (1 HSPs)
scaffold0086 (243-304)||(45731-45792)


Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 30 - 350
Target Start/End: Complemental strand, 37397780 - 37397454
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttgacattt---------taacacaatt 120  Q
    |||| ||||| ||| ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||         |||||| |||    
T  37397780 aatcaaaccttagacctttggaggagcaaactccaagatcacaagccaaccactagaccaaccccaaataggttgacatttggtgcattttaacactatt 37397681  T
Q  121 gtttgttgaaaattgcttaatcattctcatttaccacattcattcattcaatcattctcaataccttttaaaaacattcatttgctta-tggtaagcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37397680 gtttgttgaaaattgcttaatcattctcatttaccacattcattca----atcattctcaataccttttaaaaacattcatttgcttaatggtaagcatg 37397585  T
Q  220 tcttttaaaaatcaattcaatttatacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaaacaaagcgttgtgct 319  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  37397584 tctttgaaaaatcaattcaatttatacaaaagtacgcaaaatcaattttaaaacaatagaatactacaaatttatttacttttaaacaaagtgttgtgct 37397485  T
Q  320 acattacattatccctaaggatgttgtatct 350  Q
    ||||||||||||| |||||||||||| ||||    
T  37397484 acattacattatctctaaggatgttgcatct 37397454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 5067375 - 5067295
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  5067375 cagagaaaatcgaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactagaccaactccaaatgggtt 5067295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 13108579 - 13108652
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  13108579 aatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 13108652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 32059570 - 32059643
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  32059570 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32059643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 4603844 - 4603776
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  4603844 aatcgaacttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 4603776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 25587006 - 25586926
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||| ||||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  25587006 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 25586926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 23270641 - 23270727
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    ||||| ||| ||||||||| ||||| ||||||| ||||||||||||| |||||||| |||||||||| |||||||||||| ||||||    
T  23270641 gcatcggaggaaatcgaacttgagacctttggatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttga 23270727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 22392768 - 22392695
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  22392768 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22392695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 15971242 - 15971320
Alignment:
Q  20 catcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||| ||||||||||||||| || |||||||||||||||||| |||||||| |||||||||  ||||||| ||||    
T  15971242 catcagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccctaaat 15971320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 38684275 - 38684209
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaa 96  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  38684275 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaaccccaa 38684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 13038584 - 13038657
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||  |||||||||| |||||||||||| ||||    
T  13038584 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 13038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 15641235 - 15641308
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| | |||||||||| ||||    
T  15641235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgggtt 15641308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 31288076 - 31288149
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||| |||| ||||    
T  31288076 aatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacccaaaatgggtt 31288149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 34049889 - 34049816
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||| ||||| |||||||||||| ||||    
T  34049889 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaactactagcccaaccccaaatgggtt 34049816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 8484791 - 8484859
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  8484791 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 8484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 36954885 - 36954817
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || | |||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  36954885 aatcgaacctgagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaaccccaaat 36954817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 38631091 - 38631159
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||| |||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  38631091 aatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 38631159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 42193563 - 42193491
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaac 91  Q
    ||||||||| ||||||||||||||| || ||| | |||||||||||| ||||||||||||||||||| |||||    
T  42193563 gcatcagaggaaatcgaacctgagacctctggggaagcaaactccaagatcccaagtcaaccactaggccaac 42193491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 10399847 - 10399772
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||| |||| ||||||| ||||||| || |||||||||||| |||| |||||||||||||||||||| ||||||    
T  10399847 cagagagaatcaaacctgaaatctttgaagaagcaaactccaagatccaaagtcaaccactagaccaacaccaaat 10399772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 25750750 - 25750809
Alignment:
Q  39 tgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  25750750 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 25750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 27487690 - 27487753
Alignment:
Q  35 aacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||| || |||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  27487690 aacctgagacctctggaagagcaaactccaaaatcccaaatcaaccactaggccaaccccaaat 27487753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 1827651 - 1827733
Alignment:
Q  21 atcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||  |||||||||||||| || |||||||||||||||||| ||| |||| ||||||||||  ||||||||||| ||||    
T  1827651 atcagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgggtt 1827733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 22253269 - 22253343
Alignment:
Q  24 agagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||| |||||||||||||||   |||||||||| || || |||||||| |||||||||||||||||||||||    
T  22253269 agagaaagtcgaacctgagatctagagaggagcaaagtcaaagatcccaagccaaccactagaccaaccccaaat 22253343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 6014410 - 6014482
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| ||| |||||| |||| ||||||||||||    
T  6014410 aatcgaacctgagatctctggagaagcaaactccaagatcccaagccaatcactaggccaa-cccaaataggtt 6014482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 10869695 - 10869760
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaacccca 95  Q
    |||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |  |||||||||    
T  10869695 aatcgaacctgagacctttggaggagcaaactccaagatcgcaagtcaaccaccatgccaacccca 10869760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 11926632 - 11926705
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| ||||||||| || |||||||||||||||||| |||||||  |||||||||| |||||||||||| ||||    
T  11926632 aatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 11926705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 34310209 - 34310136
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| || ||||| | |||||||| |||||||||||| ||||    
T  34310209 aatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactaggccaaccccaaatgggtt 34310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 19145541 - 19145609
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||| |||| |||  |||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  19145541 aatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaat 19145609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 28614604 - 28614686
Alignment:
Q  20 catcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||  ||||||||||||||||||||||||| ||||||| || ||| |||| ||||||||  ||||||||||||| ||||    
T  28614604 catcagaggtaatcgaacctgagatctttggaggaacaaactctaagatctcaagccaaccact-caccaaccccaaatgggtt 28614686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 33709631 - 33709694
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccc 93  Q
    |||||||| ||||| || |||||||||||||||||| |||||||| |||||||||| |||||||    
T  33709631 aatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 33709694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 3715057 - 3715115
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttgac 106  Q
    |||||||||||||||||| |||||||  |||||||||| |||||||||||| |||||||    
T  3715057 tggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaattggttgac 3715115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 12398578 - 12398628
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacc 80  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  12398578 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 12398628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 27498861 - 27498934
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || | |||||||||||||||| || ||||| ||||||||||  ||||||||||| ||||    
T  27498861 aatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaatgggtt 27498934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 30485895 - 30485822
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || || ||||||||||||||| |||||||| ||||| || | |||||||||||| ||||    
T  30485895 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccgctgggccaaccccaaatgggtt 30485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 11465030 - 11465110
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||| |||||||||||||||  |||||||||||||||||||| ||  |||| ||| |||||| ||||||| |||| ||||    
T  11465030 cagaggaaatcgaacctgagacatttggaggagcaaactccaagatttcaagccaatcactaggccaacccgaaatgggtt 11465110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 16616192 - 16616132
Alignment:
Q  24 agagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccacta 84  Q
    |||| |||||||| ||||||||||| |||||||||||||||| |||||||| |||| ||||    
T  16616192 agagtaaatcgaatctgagatctttagaggagcaaactccaagatcccaagccaactacta 16616132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 37495114 - 37495059
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactag 85  Q
    |||||||||||||| || |||||||||||||||||| ||| |||| ||||||||||    
T  37495114 aatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactag 37495059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 204177 - 204227
Alignment:
Q  53 gagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||| |||||    
T  204177 gagcaaactccaagatcacaagtcaaccactagaccaactccaaagaggtt 204227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 12317300 - 12317354
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||||| || ||||| |||||||||| |||||||||||| |||||    
T  12317300 gaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggttg 12317354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 930615 - 930683
Alignment:
Q  30 aatcgaacctgagatctttg-gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| ||||| ||||||||||||| |||||| |||| |||||||| | ||||||||||||    
T  930615 aatcgaacctgaga-ctttgagaggagcaaactctaaaatctcaagccaaccactgggccaaccccaaat 930683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 2499308 - 2499380
Alignment:
Q  30 aatcgaacctgagatctttgga-ggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggt 102  Q
    |||||||||||||| ||||| | |||||||| ||||| ||||||||||| ||||||  ||||||||||||||||    
T  2499308 aatcgaacctgaga-ctttgaaaggagcaaattccaagatcccaagtcagccactaagccaaccccaaataggt 2499380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 15931126 - 15931053
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||  | || || |||||||||||| ||||||||  ||||||||| |||||||||||| ||||    
T  15931126 aatcgaacctgagacttgtgaagaagcaaactccaagatcccaagctaaccactaggccaaccccaaatgggtt 15931053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 19456340 - 19456389
Alignment:
Q  31 atcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacc 80  Q
    ||||||||||||| || |||||||||||||||||| |||||||| |||||    
T  19456340 atcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 19456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 18207274 - 18207231
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaa 73  Q
    |||||||||||||| || |||||||||||||||||| |||||||    
T  18207274 aatcgaacctgagacctctggaggagcaaactccaagatcccaa 18207231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 8780551 - 8780477
Alignment:
Q  24 agagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| |||||||||||||| |||  |||||||| ||||||| |||| | ||||||||||||  ||||| |||||    
T  8780551 agagacaatcgaacctgagaccttgagaggagcacactccaagatccgatgtcaaccactaggtcaacctcaaat 8780477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 42006842 - 42006792
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||||||||||| ||| |||| |||||||||| ||||||||||||    
T  42006842 tggatgagcaaactccaagatctcaagccaaccactagcccaaccccaaat 42006792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 26603928 - 26603977
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaattt 292  Q
    ||||| ||||||| ||||||||||  |||| |||||||||||||||||||    
T  26603928 atacacaagtacgtaaaatcaattccaaaataatagaatacgacaaattt 26603977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 31074314 - 31074262
Alignment:
Q  23 cagagaaaatcgaacctgagatctt-tggaggagcaaactccaaaatcccaag 74  Q
    |||||| ||||||||||||||||||  |||||| || ||||||||||||||||    
T  31074314 cagagagaatcgaacctgagatcttgaggaggaacacactccaaaatcccaag 31074262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 33025538 - 33025474
Alignment:
Q  39 tgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||  |||||||| ||||||| |||||||| ||||| | || |||||||||||| ||||    
T  33025538 tgagatcttgagaggagcacactccaagatcccaagccaaccgcgaggccaaccccaaatgggtt 33025474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 106 - 348
Target Start/End: Original strand, 21854 - 22115
Alignment:
Q  106 cattttaacacaattgtttgttgaaaattgctt-----aatcattctcatttaccacattcattcattcaatcattctcaataccttttaaaaac----- 195  Q
    ||||||||||| || ||||||||||||||||||     |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||         
T  21854 cattttaacactatagtttgttgaaaattgcttttttcaatcattcccatttaccatattcattcattcaatcattctcaataccttttaaaaacgttta 21953  T
Q  196 --------attcatttgctta-tggtaagcatgtcttttaaaaatcaattcaatttatacaaaagtacgcaaaatcaattttaaaacaatagaatacgac 286  Q
            |||||||| |||| |||||||||||||||  ||| |||||||||||| ||||| ||| ||||||  ||||||  |||| |||||||||||||    
T  21954 ttaaaaatattcattttcttaatggtaagcatgtcttagaaagatcaattcaattcatacacaagcacgcaatgtcaattccaaaataatagaatacgac 22053  T
Q  287 aaatttatttacttttaaacaaagcgttgtgctacattacattatccctaaggatgttgtat 348  Q
    |||||||| || |||||||||||| |||||| |||||  |||||||| ||||||||||||||    
T  22054 aaatttatctagttttaaacaaagtgttgtgttacataccattatccataaggatgttgtat 22115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 24018459 - 24018380
Alignment:
Q  24 agagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  24018459 agaggaaatcgaacctcagacctttggaggagcaaactccaagatcccaagtcaaccactagatcaaccccaaataggtt 24018380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 3734753 - 3734826
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  3734753 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 3734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 28193545 - 28193472
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||||||||    
T  28193545 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaataggtt 28193472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 18532178 - 18532104
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  18532178 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 18532104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 32879350 - 32879277
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || ||||||| ||||||| || |||||||||||||||||||||||||||||||| ||||    
T  32879350 aatcgaacctgagacctctggaggaccaaactcgaagatcccaagtcaaccactagaccaaccccaaatgggtt 32879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 34237785 - 34237858
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  34237785 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34237858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 42643248 - 42643321
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||| |||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  42643248 aatcgaatctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 42643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 27746465 - 27746533
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||| ||||||||||||    
T  27746465 aatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 27746533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 4718716 - 4718643
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || || ||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  4718716 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 4718643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 20305979 - 20305906
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||| |||||| |||||||||||||||||| || |||||||| |||||||||| |||||||||||| ||||    
T  20305979 aatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtt 20305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 21092612 - 21092539
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||| |||||| |||||||||||||||||| || |||||||| |||||||||| |||||||||||| ||||    
T  21092612 aatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtt 21092539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 21667622 - 21667553
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||| |||||||||||||||| |||||| || ||||| ||||||||||||||||| |||||    
T  21667622 aaatcgaacctgaaatctttggaggagcaacctccaagattccaagccaaccactagaccaacctcaaat 21667553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 39349327 - 39349254
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||| | |||||||||||| ||||    
T  39349327 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaatgggtt 39349254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 264529 - 264597
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||||| ||||||||||||||| || |||||||| |||||||||| ||||| ||||||    
T  264529 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 264597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 651392 - 651324
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||||| ||||||||||||||| || |||||||| |||||||||| ||||| ||||||    
T  651392 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 837127 - 837059
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||||| ||||||||||||||| || |||||||| |||||||||| ||||| ||||||    
T  837127 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 15259536 - 15259604
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||| ||||| |||||||  |||||||||||||||||||||||    
T  15259536 aatcgaacctgagacctctggaggagcaaaatccaagatcccaaaccaaccactagaccaaccccaaat 15259604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 19471680 - 19471612
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  19471680 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 19471612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 19542604 - 19542536
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  19542604 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 19542536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 19590092 - 19590160
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  19590092 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 19590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 34694706 - 34694774
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||| ||| |||  |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  34694706 aatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccactagaccaaccccaaat 34694774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 2618257 - 2618183
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||  ||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  2618257 aatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 2618183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 8042724 - 8042657
Alignment:
Q  31 atcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||  |||||||||||||||||||| |||||||| ||| ||||||  |||||||||||    
T  8042724 atcgaacctgagacttttggaggagcaaactccaagatcccaagccaagcactaggtcaaccccaaat 8042657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 7558066 - 7558148
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    ||||| |||||||| ||||||  | |||||||||||||||||| ||||||||  ||| ||||| |||||||||||| ||||||    
T  7558066 cagaggaaatcgaatctgagacttctggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggttga 7558148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 21603301 - 21603241
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaa 90  Q
    |||||||||||||| || ||||||||||||||| || |||||||| |||||||||| ||||    
T  21603301 aatcgaacctgagacctctggaggagcaaactctaagatcccaagccaaccactaggccaa 21603241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 36848899 - 36848947
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  36848899 gaggagcaaactccaaaaacccaagtcaaccactatgccaaccccaaat 36848947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 34639337 - 34639404
Alignment:
Q  31 atcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| ||||||| |||  |||||||| ||||||| |||||||| |||||||||||| ||||||||||    
T  34639337 atcgagcctgagaccttgagaggagcacactccaagatcccaagccaaccactagactaaccccaaat 34639404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 14633025 - 14632975
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacc 80  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||    
T  14633025 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 14632975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 28088357 - 28088283
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    ||||||| |||||| || |||| || |||||||||| ||||||||||||||||||  ||||||||| || |||||    
T  28088357 aatcgaatctgagacctctggatgaacaaactccaagatcccaagtcaaccactaagccaaccccagatgggttg 28088283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 26168978 - 26169051
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| ||||||||| |||  |||||||||||||||| ||||||||  ||||||||| ||||||| |||| ||||    
T  26168978 aatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaaccctaaatgggtt 26169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 32108222 - 32108283
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||| ||||||||||||||||||  ||||||||||||||||  || |||||||| ||||||    
T  32108222 atacacaagtacgcaaaatcaattccaaaacaatagaatacggtaactttatttagttttaa 32108283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 41070832 - 41070767
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaacccca 95  Q
    |||||||| ||||| |||  ||| |||| ||||||| ||||||||||||||||||| |||||||||    
T  41070832 aatcgaacttgagaccttgagagtagcacactccaagatcccaagtcaaccactaggccaacccca 41070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 2166770 - 2166695
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaac--cactagaccaaccccaaataggtt 103  Q
    |||||||||||||| |||||||| |||||||||||| |||||||  ||||  |||| | |||||||||||| ||||    
T  2166770 aatcgaacctgagacctttggagaagcaaactccaagatcccaaaccaactgcactgggccaaccccaaatgggtt 2166695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 20469988 - 20469944
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaag 74  Q
    |||||||||||||| || |||||||||||||||||| ||||||||    
T  20469988 aatcgaacctgagacctctggaggagcaaactccaagatcccaag 20469944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 28908872 - 28908824
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||||||| ||||  |||||||||||||||| ||||||    
T  28908872 gaggagcaaactccaaaattccaaaccaaccactagaccaactccaaat 28908824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 39317087 - 39317023
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||| |||  ||| |||| ||||||| ||| |||||||||||||||||||||| |||||    
T  39317087 gaacctgagagcttgagagaagcacactccaatatctcaagtcaaccactagaccaacctcaaat 39317023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 42328075 - 42328008
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||||| | || |||||||| ||||||||| |||||||| |||||||||| ||||||||||||    
T  42328075 aatcaaacctgacacctctggaggag-aaactccaagatcccaagccaaccactaggccaaccccaaat 42328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 32108309 - 32108356
Alignment:
Q  302 taaacaaagcgttgtgctacattacattatccctaaggatgttgtatc 349  Q
    |||||||||| ||||| ||||||||||| ||| |||||||||||||||    
T  32108309 taaacaaagccttgtgttacattacattctccgtaaggatgttgtatc 32108356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 8765656 - 8765700
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaag 74  Q
    ||||||||||||||||| ||| |||||||||||||| ||| ||||    
T  8765656 aatcgaacctgagatctctgggggagcaaactccaagatctcaag 8765700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 24999287 - 24999230
Alignment:
Q  54 agcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttgacattttaa 113  Q
    |||||||||||  ||||||||||||||||||||||  |||||||| |||| | |||||||    
T  24999287 agcaaactccatgatcccaagtcaaccactagacc--ccccaaatgggttaatattttaa 24999230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 28964084 - 28964036
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||| || ||| |||  |||||||||||||||||||||||    
T  28964084 gaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaat 28964036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 48977455 - 48977381
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  48977455 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggttg 48977381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 40133579 - 40133652
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||    
T  40133579 aatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatgggtt 40133652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 7485644 - 7485728
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||    
T  7485644 gcatcagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaaccccaaatgggtt 7485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 30257691 - 30257617
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  30257691 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 30257617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 21363010 - 21362937
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  21363010 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 21362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 25289844 - 25289917
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  25289844 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 25289917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 40940892 - 40940819
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  40940892 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 40940819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 45529884 - 45529958
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  45529884 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 45529958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 7470345 - 7470418
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| | |||||||||| ||||    
T  7470345 aatcgaacctgagacctttggaggagcaaactccaagatctcaagtcaaccactaggcaaaccccaaatgggtt 7470418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 30807283 - 30807356
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  30807283 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 30807356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 35492978 - 35492905
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  35492978 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 35492905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 46576415 - 46576342
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  46576415 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 46576342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 25344187 - 25344255
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| |||||||||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  25344187 aatcaaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactaggccaaccccaaat 25344255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 25379828 - 25379760
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  25379828 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 29515552 - 29515624
Alignment:
Q  233 aattcaatttatacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaaa 305  Q
    ||||||||| ||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  29515552 aattcaattcatacacaagtacccaaaatcaattcgaaaacaatagaatacgacaaatttatttacttataaa 29515624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 52821765 - 52821833
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  52821765 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacaccaaat 52821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 53424306 - 53424374
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  53424306 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 53424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 8456280 - 8456353
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || ||||||||||||||| || |||||||| |||||||||| |||||||||||| ||||    
T  8456280 aatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 8456353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 26174187 - 26174114
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaa 96  Q
    ||||| ||||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||| ||||    
T  26174187 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 34492705 - 34492778
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  34492705 aatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 52455779 - 52455847
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| ||||| || |||||||||| ||||||||||||    
T  52455779 aatcgaacctgagacctctggaggagcaaactccaagatccctagccaaccactaggccaaccccaaat 52455847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 18177017 - 18177092
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    |||||||||||| | || |||| ||||||||||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  18177017 aatcgaacctgatacctctggaagagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 18177092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 29915398 - 29915472
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||  |||||| |||| ||||    
T  29915398 aaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtt 29915472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 29964551 - 29964625
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||  |||||| |||| ||||    
T  29964551 aaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtt 29964625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 11390676 - 11390599
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaatag 100  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||| ||| |||  |||||||||| ||||||||||||||    
T  11390676 cagaggaaatcaaacctgaaatctttggaggagaaaactccaagatctcaaaccaaccactaggccaaccccaaatag 11390599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 32151497 - 32151428
Alignment:
Q  24 agagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccc 93  Q
    ||||| |||||||  ||| | ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  32151497 agagagaatcgaatttgaaacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccc 32151428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 49258392 - 49258465
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||| ||| |||||||| |||||||||| | |||||||||| ||||    
T  49258392 aatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaatgggtt 49258465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 50583066 - 50582985
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    ||||| ||||||||||||| | |||  |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||    
T  50583066 cagaggaaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttg 50582985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 9853683 - 9853623
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaa 90  Q
    |||||||||||||| ||||||||||||||||||||| |||||||   ||||||||||||||    
T  9853683 aatcgaacctgagacctttggaggagcaaactccaagatcccaaactaaccactagaccaa 9853623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 26108359 - 26108299
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaa 90  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||    
T  26108359 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 26108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 49167130 - 49167070
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccact 83  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||    
T  49167130 cagagagaatcgaacctgatatctttggaggagcaaactccaagatctcaagccaaccact 49167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 15566629 - 15566692
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccc 93  Q
    |||||||||||||| || |||||||||||||||||| ||| |||| |||||||||| |||||||    
T  15566629 aatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccc 15566692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 53234033 - 53234095
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactag 85  Q
    |||||| ||||||||||||||  | |||||||||||||||||| |||||||| ||||||||||    
T  53234033 cagagagaatcgaacctgagacttctggaggagcaaactccaagatcccaagccaaccactag 53234095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 31537968 - 31538041
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| ||| ||||| || |||||||||||||||||| |||| ||| |||||||||| |||||||||||| ||||    
T  31537968 aatcaaacatgagacctctggaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 31538041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 45272546 - 45272619
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||| ||||||  | |||||||||||||||||| |||||||| |||| ||||| |||||||||||| ||||    
T  45272546 aatcgaaactgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaatgggtt 45272619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 38733040 - 38732960
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| ||||| |||||||| || ||||||| |||||||||| || |||||||||||| ||| |||||| ||||| ||||    
T  38733040 cagagagaatcggacctgagacctctggaggaacaaactccaagattccaagtcaaccattagcccaacctcaaatgggtt 38732960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 9842970 - 9842915
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||||||| |||||||  ||||||||||||||||||||||| ||||    
T  9842970 tggaggagaaaactccaagatcccaaaccaaccactagaccaaccccaaatgggtt 9842915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 25017582 - 25017510
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| ||||||||||||||||||||||||| || ||||| ||||  || | |||||||||||| ||||    
T  25017582 aatcgaacctaagatctttggaggagcaaactccaagat-ccaagccaacatctgggccaaccccaaatgggtt 25017510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 51532867 - 51532782
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||| ||||| |||||||| ||||| |||||||| |||||||||||||||| |||  |||| | |||  ||||||||||| |||||    
T  51532867 gcattagagagaatcgaacatgagacctttggagaagcaaactccaaaatctcaaaccaactaataggtcaaccccaaatgggttg 51532782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 55371415 - 55371488
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||| |||  ||| |||| ||||||||||| |||| |||||||||| |||||| ||||||||||    
T  55371415 aatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctcaaataggtt 55371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 4462700 - 4462632
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||| |||||  |||| || |||||||||||| ||| |||| |||||||||| ||||||||||||    
T  4462700 aatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaaccccaaat 4462632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 4252546 - 4252601
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    |||||||| ||||||| ||| |||| |||||||||| |||||||||||| ||||||    
T  4252546 gaggagcacactccaagatctcaagccaaccactaggccaaccccaaatgggttga 4252601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 39041975 - 39042026
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaag 74  Q
    |||||| |||||||| ||||| || |||||||||||||||||| ||||||||    
T  39041975 cagagagaatcgaacttgagacctctggaggagcaaactccaagatcccaag 39042026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 50195410 - 50195481
Alignment:
Q  31 atcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggt 102  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||| |||||||||  | ||||||||| ||||    
T  50195410 atcgaacttgagatcttgagagaagcaaactccaagatcccaagacaaccactatgctaaccccaaacaggt 50195481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 24703748 - 24703703
Alignment:
Q  53 gagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||| || || |||||||||||||||||||||||||| |||||    
T  24703748 gagcaaattctaagatcccaagtcaaccactagaccaacctcaaat 24703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 53288842 - 53288895
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccact 83  Q
    |||||| ||||||| |||||||||||||||||| || |||||||  ||||||||    
T  53288842 aatcgagcctgagacctttggaggagcaaactctaatatcccaaaccaaccact 53288895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 55287870 - 55287797
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||| | || || |||||||||||| || || ||||| |||||||||  |||||||||||| ||||    
T  55287870 aatcgaacctgaaacctctgaaggagcaaactctaagattccaagccaaccactatgccaaccccaaatgggtt 55287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 26535072 - 26535036
Alignment:
Q  63 caaaatcccaagtcaaccactagaccaaccccaaata 99  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  26535072 caaaatctcaagtcaaccactagaccaatcccaaata 26535036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 36660833 - 36660769
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||| |||  |||||||||||||||| |||| ||  ||||||||||  |||||||||||    
T  36660833 gaacctgagaccttgagaggagcaaactccaagatcctaaaccaaccactaggtcaaccccaaat 36660769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 46607877 - 46607804
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  46607877 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 46607804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 27454985 - 27455069
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||  |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  27454985 gcatcagagtgaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 27455069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 1378819 - 1378744
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  1378819 cagagaaaatcgaacatgagacctttggaggagtaaactccaagattccaagtcaaccactagaccaaccccaaat 1378744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 7197365 - 7197449
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||  |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  7197365 gcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7197449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 8077721 - 8077641
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  8077721 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 8077641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 4621367 - 4621442
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||    
T  4621367 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttga 4621442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 24674460 - 24674387
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  24674460 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 24674387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 15059525 - 15059605
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| |||||||||||||| || |||||||||||||||||| || ||||| |||||||||| |||||||||||| ||||    
T  15059525 cagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggtt 15059605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 29057467 - 29057542
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    |||||||||||||| |||||||| |||||||||||| |||||||  |||||||||| |||||||||||| ||||||    
T  29057467 aatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttga 29057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 52135203 - 52135129
Alignment:
Q  24 agagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| ||||||||||||||  ||  || ||||||||||||| ||||||||||||||||||||||||||||||||    
T  52135203 agagataatcgaacctgagacattgagatgagcaaactccaagatcccaagtcaaccactagaccaaccccaaat 52135129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 34778409 - 34778336
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| ||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  34778409 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34778336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 46113532 - 46113600
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| |||||||  |||||||||| ||||||||||||    
T  46113532 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 1378972 - 1378889
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttgac 106  Q
    ||||| ||||||||| |||||  |||||||||||||||||||| ||||||||||||||||||  ||||||  |||| |||||||    
T  1378972 cagaggaaatcgaacatgagacttttggaggagcaaactccaagatcccaagtcaaccactaagccaaccttaaatgggttgac 1378889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 2272422 - 2272343
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||  |||| ||||||||| || || |||||||||||| || ||||||||||||||||||| ||||||||||||    
T  2272422 gcatcagagggaatcaaacctgagacctctgtaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaat 2272343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 17935836 - 17935782
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccacta 84  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  17935836 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccacta 17935782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 20487320 - 20487394
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||| ||||| || |||||||||||||||||| ||||| || ||||||||| ||||||||||||| |||||    
T  20487320 aatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgggttg 20487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 7766857 - 7766930
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| ||||||||  ||||||||| |||||||| ||| ||||    
T  7766857 aatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaaccccgaatgggtt 7766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 37349591 - 37349522
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||||| |  ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  37349591 aaatcgaacctgagatcatgagaggagcaaactctaagatctcaagtcaaccactaaaccaaccccaaat 37349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 18646927 - 18646847
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| |||||||||||||| || ||||| ||||||||| || ||| |||| ||||||||||  ||||||||||||||||    
T  18646927 cagagagaatcgaacctgagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaaccccaaataggtt 18646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 23734194 - 23734110
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||  |||||||||||||| || |||||||||||| || || |||||||| |||| |||| ||||||||||||| ||||    
T  23734194 gcatcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgggtt 23734110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 23741386 - 23741302
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||  |||||||||||||| || |||||||||||| || || |||||||| |||| |||| ||||||||||||| ||||    
T  23741386 gcatcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgggtt 23741302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 24122090 - 24122022
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || ||||||||||||| |||| |||||||| |||||||||  ||||||||||||    
T  24122090 aatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaaccccaaat 24122022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 24217045 - 24216977
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| |||  |||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  24217045 aatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaat 24216977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 168268 - 168194
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| ||||| | |||||||||| || |||||||| |||||||||| ||||| |||||| |||||    
T  168268 aatcgaacctgagacctttgaaagagcaaactctaagatcccaagccaaccactaggccaactccaaatgggttg 168194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 32729612 - 32729539
Alignment:
Q  30 aatcgaacctgagatctttg-gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||| ||||||||||||| || |||||||| |||||||||| |||||||||||| ||||    
T  32729612 aatcgaacctgaga-ctttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 32729539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 23232395 - 23232468
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||| | || |||| ||||||||| ||| ||||||||||||||||||| |||| ||||||| ||||    
T  23232395 aatcgaacctgaaacctctggaagagcaaacttcaagatcccaagtcaaccactaggccaatcccaaatgggtt 23232468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 30677243 - 30677170
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| ||||||||| ||||||||||||||||||| | |||||||  ||||||||||  ||||||||||| ||||    
T  30677243 aatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaatgggtt 30677170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 37351591 - 37351643
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccac 82  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| |||||||    
T  37351591 aatcgaacctgagacatttggaggagcaaactccaagatcccaagccaaccac 37351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 7578476 - 7578421
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactag 85  Q
    |||||||||||||| || ||||||| |||||||||| |||||||| ||||||||||    
T  7578476 aatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactag 7578421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 33905640 - 33905690
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacc 80  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||    
T  33905640 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 33905690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 21726796 - 21726723
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||| ||| | ||||| |||||||||||  ||||| ||||| ||||    
T  21726796 aatcgaacctgagacctctggaggagcaaacttcaagaacccaaatcaaccactaggtcaacctcaaatgggtt 21726723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 25496618 - 25496691
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||| |||  ||||||||| |||||| |||||||| ||| |||||| ||||| |||||||||||    
T  25496618 aatcgaacttgagaccttaagaggagcaatctccaagatcccaagccaatcactaggccaacgccaaataggtt 25496691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 1095154 - 1095194
Alignment:
Q  59 actccaaaatcccaagtcaaccactagaccaaccccaaata 99  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  1095154 actccaagatcccaagccaaccactagaccaaccccaaata 1095194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 8879260 - 8879296
Alignment:
Q  67 atcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||||||||||||||| |||||||||    
T  8879260 atcccaagtcaaccactagaccaaccctaaataggtt 8879296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 47091735 - 47091683
Alignment:
Q  52 ggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| ||| |||| |||||||||| |||||||||||| |||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggttg 47091683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 8779865 - 8779920
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccacta 84  Q
    |||||||| |||||| || ||||| |||||||||||| ||||||| ||||||||||    
T  8779865 aaatcgaagctgagacctctggagaagcaaactccaagatcccaaatcaaccacta 8779920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 9500478 - 9500529
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaag 74  Q
    |||||| |||||||||||||| || || ||||||||||||||| ||||||||    
T  9500478 cagagagaatcgaacctgagacctctgaaggagcaaactccaagatcccaag 9500529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 1138644 - 1138567
Alignment:
Q  32 tcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttgacatt 109  Q
    |||||||| ||| |||  |||||||| ||||||| ||| |||| ||||||||||  ||||||||||| |||| |||||    
T  1138644 tcgaacctaagaccttgagaggagcacactccaagatctcaagccaaccactaggtcaaccccaaatgggttaacatt 1138567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 7946911 - 7946838
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||| || |||||||||||||| ||| ||| |||| ||||||||||  | ||||||||| ||||    
T  7946911 aatcgaacttgagacctctggaggagcaaacttcaagatctcaagccaaccactaggtcgaccccaaatgggtt 7946838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 36321910 - 36321861
Alignment:
Q  255 gcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||| ||||||    
T  36321910 gcaaaatcattttcaaaataatagaatacgacaaatttctttagttttaa 36321861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 45859173 - 45859222
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaac 79  Q
    |||||||||||||| || | |||||||||||||||| |||||||| ||||    
T  45859173 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaac 45859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 1818801 - 1818733
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||| | || |||| ||||||||||||| |||| ||| |||| || || ||||||||||||    
T  1818801 aatcgaacctgaaacctctggaagagcaaactccaagatcctaagccaactaccaggccaaccccaaat 1818733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 6776196 - 6776148
Alignment:
Q  45 ctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccc 93  Q
    ||||| ||||||||||||||| |||||||  |||||||||| |||||||    
T  6776196 ctttgaaggagcaaactccaagatcccaaaccaaccactaggccaaccc 6776148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 9926298 - 9926346
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||| ||||||| ||||||||||||| ||||||||| | ||||||    
T  9926298 gaggagcacactccaagatcccaagtcaactactagaccagctccaaat 9926346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 19034509 - 19034569
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccact 83  Q
    |||||| |||||||||||| | |||| ||||| |||||||||| |||||||  ||||||||    
T  19034509 cagagataatcgaacctgaaaccttttgaggaacaaactccaagatcccaaaccaaccact 19034569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 5212 - 5285
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  5212 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 5285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 12884 - 12957
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||    
T  12884 aatcgaacctgagatctctggaggagcgaactccaagatcccaagtcaaccactaggccaatcccaaataggtt 12957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 7439 - 7512
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||| |||||||||||||||||    
T  7439 aatcgaacctgagatctctggaggagcaaactccaagatcccaagccaactactaggccaaccccaaataggtt 7512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 41774 - 41847
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  41774 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 41847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 2751342 - 2751269
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  2751342 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 2751269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 10091259 - 10091186
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  10091259 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 10091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 21217952 - 21218036
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||  |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  21217952 gcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 21218036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 8435818 - 8435893
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| ||||||||||| |||||||   ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8435818 cagaggaaatcgaacctaagatcttcaaaggagcaaactccaagatcccaagtcaaccactagaccaaccccaaat 8435893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 2344370 - 2344296
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    ||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  2344370 aatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 2344296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 40543040 - 40543114
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  40543040 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 40543114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 7175992 - 7176065
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  7175992 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7176065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 7275348 - 7275275
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  7275348 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7275275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 23854467 - 23854394
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  23854467 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 23854394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 2103126 - 2103058
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  2103126 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2103058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 22119959 - 22119891
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  22119959 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 22119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 18044178 - 18044105
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||| || || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  18044178 aatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 18044105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 22638363 - 22638290
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||| | |||||||||| || ||| |||||||||||||||||||||||||||| ||||    
T  22638363 aatcgaacctgagacctttgaaagagcaaactctaagatctcaagtcaaccactagaccaaccccaaatgggtt 22638290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 27312223 - 27312150
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||| | || | |||||||||||||||| |||||||| |||||||||| |||||||||||||||||    
T  27312223 aatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaataggtt 27312150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 7799962 - 7800030
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||  |||||||||||    
T  7799962 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaat 7800030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 17212131 - 17212051
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| ||| |||||||||| || |||||||||||||||||| |||||||| |||||||||  |||||||||||| ||||    
T  17212131 cagagagaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 17212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 21835222 - 21835154
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||  |||||| ||||    
T  21835222 aatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccctaaat 21835154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 40332177 - 40332097
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||| ||||||||||||||| |||| |||||||||||||||| ||  |||| |||||||||||||||| |||||| ||||    
T  40332177 cagaggaaatcgaacctgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaactccaaatgggtt 40332097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 31197662 - 31197588
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||| |||||||||  | |||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  31197662 aatcaaacctgagacatctggatgagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggttg 31197588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 11997920 - 11997847
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || | |||||||||||||||| |||||||| |||||||||| |||||| ||||| ||||    
T  11997920 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatgggtt 11997847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 28647040 - 28646967
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| |||  ||| |||| ||||||| |||||||||||| |||||| |||||||||||||||||    
T  28647040 aatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaataggtt 28646967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 32849662 - 32849589
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| |||| |||| || |||||||||||||||||| ||||||||||||||||||| | |||||||||| ||||    
T  32849662 aatcaaacccgagacctctggaggagcaaactccaagatcccaagtcaaccactaggctaaccccaaatgggtt 32849589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 13332553 - 13332621
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| |||||||| ||  ||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  13332553 aatcgtacctgagacctcaggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 13332621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 25333489 - 25333417
Alignment:
Q  31 atcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||| || ||||| |||||||||||| |||||||| |||||||||  |||||||||||| ||||    
T  25333489 atcgaacctgagacctctggagaagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 25333417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 27009429 - 27009357
Alignment:
Q  31 atcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||| || |||| ||||||||||||| |||| ||| |||||||||| |||||||||||| ||||    
T  27009429 atcgaacctgagacctctggatgagcaaactccaagatccgaagccaaccactaggccaaccccaaatgggtt 27009357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 12211658 - 12211733
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| ||||| |||||||||||||  |||||||| ||||||| |||| ||| |||||||||| ||||||||||||    
T  12211658 cagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaaccccaaat 12211733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 28089886 - 28089819
Alignment:
Q  31 atcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||  | |||||||||||||||||| ||| |||| |||||||||| ||||||||||||    
T  28089886 atcgaacctgagacatctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaat 28089819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 42913642 - 42913705
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaacc 92  Q
    ||||||||||||||| || | |||||||||||||||| |||||||| |||||||||| ||||||    
T  42913642 aaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaacc 42913705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 3951108 - 3951189
Alignment:
Q  18 agcatcagagaaaatcgaacctgagatctttg-gaggagcaaactccaaaatccc-aagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| |||||| |||| ||||| |||||||| ||||||| ||||| ||| |||||||||||||||||||||||    
T  3951108 agcatcagagaaaagcgaacccgaga-ctttgagaggagcacactccaagatccccaagccaaccactagaccaaccccaaat 3951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 22703557 - 22703503
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccacta 84  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||    
T  22703557 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 22703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 28003889 - 28003839
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  28003889 tggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaat 28003839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 31713018 - 31713100
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    ||||| ||||| | ||||||| || | |||||||||||||||| |||||||  |||||||||| |||||||||||| ||||||    
T  31713018 cagaggaaatcaatcctgagacctctcgaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttga 31713100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 19421303 - 19421234
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||| || | |||||||||||||||| |||||||| |||||||||   |||||||||||    
T  19421303 aaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaaccccaaat 19421234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 21574233 - 21574301
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||| || |||  |||||||| |||||||||||||||  |||||||||| ||||||||||||    
T  21574233 aatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaat 21574301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 22299920 - 22299865
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactag 85  Q
    |||||||| ||||| || |||||||||||||||||| |||||||| ||||||||||    
T  22299920 aatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactag 22299865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 39145800 - 39145855
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| ||||| ||||    
T  39145800 tggaggagcaaactccaagatcccaagtcaaccactaggtcaacctcaaatgggtt 39145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 17197080 - 17197158
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttgacat 108  Q
    |||||||| ||||| || |||||||||||||||||| ||| |||  |||||||||| || ||||||||| |||| ||||    
T  17197080 aatcgaacttgagacctatggaggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaatgggttaacat 17197158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 23330871 - 23330937
Alignment:
Q  32 tcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||| |||  |||||||| |||| ||||||||||| |||||||||| | ||||||||||    
T  23330871 tcgaacctgagaccttgagaggagcacactctaaaatcccaagccaaccactaggctaaccccaaat 23330937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 1469184 - 1469115
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||| |||  || || |||||||||| ||  ||||||||||||||| ||||||||||||    
T  1469184 aaatcgaacctgagaccttgagatgaacaaactccaagatttcaagtcaaccactaggccaaccccaaat 1469115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 21370668 - 21370595
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||  | || ||||| ||||||||| |||||||  |||||||||| |||||||||||| ||||    
T  21370668 aatcgaacctgagacatctgaaggagtaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 21370595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 27704074 - 27704005
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||| || || ||||||||||| ||| ||| |||| |||||||| ||||||| ||||||    
T  27704074 aaatcgaacctgagacctctgtaggagcaaacttcaagatctcaagccaaccactggaccaactccaaat 27704005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 31273985 - 31273936
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaac 79  Q
    |||||||| ||||| || |||||||||||||||||| |||||||||||||    
T  31273985 aatcgaacttgagagctctggaggagcaaactccaagatcccaagtcaac 31273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 43785429 - 43785502
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||| |||||||||||||| ||| || |||||||| |||||| |||  ||||||||||| ||||    
T  43785429 aatcgaacttgagacctttggaggagcaatctcaaagatcccaagccaaccattaggtcaaccccaaatgggtt 43785502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 9718117 - 9718185
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||| |||||  |||||||||||||||||||| ||| || | |||||||||| |||||| |||||    
T  9718117 aatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacctcaaat 9718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 22696391 - 22696327
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaacccc 94  Q
    |||| ||||||||| |||  |||||||| ||||||| ||||||| ||||||||||| ||||||||    
T  22696391 aatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacccc 22696327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 42814915 - 42814867
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||||| ||||||||||||||||||  ||||| ||||||    
T  42814915 gaggagcaaactccaagatcccaagtcaaccactaagccaactccaaat 42814867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 24686132 - 24686166
Alignment:
Q  51 aggagcaaactccaaaatcccaagtcaaccactag 85  Q
    ||||||||||||||| |||||||||||||||||||    
T  24686132 aggagcaaactccaagatcccaagtcaaccactag 24686166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 9683890 - 9683829
Alignment:
Q  37 cctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||| || | |||||||||||||| | ||| ||||||||||||||| |||||| |||||    
T  9683890 cctgagacctctagaggagcaaactcccagatctcaagtcaaccactaggccaaccgcaaat 9683829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 16650692 - 16650745
Alignment:
Q  186 ttttaaaaacattcatttgctt-atggtaagcatgtcttttaaaaatcaattca 238  Q
    ||||||||||||||||||| || ||||||||||||||||  ||| |||||||||    
T  16650692 ttttaaaaacattcatttggttaatggtaagcatgtcttagaaagatcaattca 16650745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 16650775 - 16650836
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||| |||||| |||||||||||  |||| |||| |||| |||||||||||||| ||||||    
T  16650775 atacacaagtacacaaaatcaattccaaaataataaaatatgacaaatttatttagttttaa 16650836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 17625052 - 17625105
Alignment:
Q  186 ttttaaaaacattcatttgctt-atggtaagcatgtcttttaaaaatcaattca 238  Q
    ||||||||||||||||||| || ||||||||||||||||  ||| |||||||||    
T  17625052 ttttaaaaacattcatttggttaatggtaagcatgtcttagaaagatcaattca 17625105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 17625135 - 17625196
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||| |||||| |||||||||||  |||| |||| |||| |||||||||||||| ||||||    
T  17625135 atacacaagtacacaaaatcaattccaaaataataaaatatgacaaatttatttagttttaa 17625196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 14199796 - 14199848
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccac 82  Q
    |||||||||||||| || |||||||| ||||||||| || |||| ||||||||    
T  14199796 aatcgaacctgagacctctggaggaggaaactccaagattccaaatcaaccac 14199848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 23012638 - 23012706
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||| ||| || ||||| |||||||||||| |||||||| |||||||| | ||||||| ||||    
T  23012638 aatcaaacctaagacctctggagaagcaaactccaagatcccaagccaaccactgggccaaccctaaat 23012706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 31481098 - 31481062
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactaga 86  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  31481098 gaggagcacactccaaaatctcaagtcaaccactaga 31481062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 36173106 - 36173038
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||| | |||  || || ||||||||||||||||||||||| ||  || ||||||||||||    
T  36173106 aatcgaacctgaaaccttgagatgaacaaactccaaaatcccaagtcaatcataaggccaaccccaaat 36173038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 11007232 - 11007159
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  11007232 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatgggtt 11007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 12591704 - 12591631
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  12591704 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 12591631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 15360228 - 15360301
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  15360228 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 15360301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 9239042 - 9238968
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  9239042 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 9238968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 11448945 - 11448871
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaa 97  Q
    |||||| |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||    
T  11448945 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 8479386 - 8479311
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| ||||||||||||| |||||  |||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  8479386 cagaggaaatcgaacctgaaatcttaagaggagcacactccaagatcccaagtcaaccactaggccaaccccaaat 8479311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 9844012 - 9843937
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| || |||||||||||| || | |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  9844012 cagaggaagtcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 9843937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 654276 - 654349
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||| ||||||| |||| ||||||| ||||    
T  654276 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcagccactaggccaaacccaaatgggtt 654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 13753314 - 13753233
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||| ||| |||||||||| || |||||||||||||||||| |||| ||| |||||||||| |||||||||||| |||||    
T  13753314 cagagagaattgaacctgagacctctggaggagcaaactccaagatccaaagccaaccactaggccaaccccaaatgggttg 13753233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 22576134 - 22576061
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||| |||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  22576134 aatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22576061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 33718581 - 33718661
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| ||||||||||||||||| ||||| || ||||||||| |||||||  |||||||||||||||||| |||| ||||    
T  33718581 cagagagaatcgaacctgagatctctggagaagtaaactccaagatcccaaaccaaccactagaccaaccctaaatgggtt 33718661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 9208319 - 9208246
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| |||  |||||||||||||||| |||||||  ||||||||||| ||||||||||| ||||    
T  9208319 aatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaaccccaaatgggtt 9208246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 28672134 - 28672061
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| ||| || | |||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||    
T  28672134 aatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 28672061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 34147413 - 34147340
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||  | |||| ||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  34147413 aatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34147340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 34160029 - 34159956
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||  | |||| ||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  34160029 aatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34159956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 21982450 - 21982518
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||| ||| || |||||||||||||| ||| |||||||| |||||||||| ||||||||||||    
T  21982450 aatcgaacctcagacctctggaggagcaaacttcaagatcccaagccaaccactaggccaaccccaaat 21982518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 3222765 - 3222837
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || || ||||||||||| ||| |||||||| |||||||||| |||||||||||| ||||    
T  3222765 aatcgaacctgagacctctg-aggagcaaactgcaagatcccaagccaaccactaggccaaccccaaatgggtt 3222837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 3625868 - 3625941
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| |||||||||||||||||||| ||||||  ||||| |||| | |||||||| ||||||||||||| ||||    
T  3625868 aatcaaacctgagatctttggaggaccaaactttaaaattccaaattaaccactaaaccaaccccaaatgggtt 3625941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 33499537 - 33499468
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| |||  |||||||||||||||| |||||||| ||||||| || |||||||||||| ||||    
T  33499537 gaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgggtt 33499468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 3386623 - 3386570
Alignment:
Q  186 ttttaaaaacattcatttgctt-atggtaagcatgtcttttaaaaatcaattca 238  Q
    |||||||||||||||||||||| ||||||||||||||||  ||| |||||||||    
T  3386623 ttttaaaaacattcatttgcttaatggtaagcatgtcttagaaagatcaattca 3386570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 5360201 - 5360274
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || | ||| |||||||||||| |||||||| ||||||| || ||||| |||||| ||||    
T  5360201 aatcgaacctgagacctcttgagaagcaaactccaagatcccaagccaaccaccaggccaactccaaatgggtt 5360274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 11117028 - 11117089
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||| || |||||||||| ||||  ||||||||||||| ||||||||||||||| ||||||    
T  11117028 atacacaaatacgcaaaattaattccaaaacaatagaatgcgacaaatttatttagttttaa 11117089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 22961764 - 22961825
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||| ||||||||||||||||||  ||||||||| ||||| | ||||||||||| ||||||    
T  22961764 atacataagtacgcaaaatcaattccaaaacaataaaatacaataaatttatttagttttaa 22961825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 23826629 - 23826568
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||| ||||||||||||||||||  ||||||||| ||||| | ||||||||||| ||||||    
T  23826629 atacataagtacgcaaaatcaattccaaaacaataaaatacaataaatttatttagttttaa 23826568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 14212959 - 14212891
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| ||||| || |||||| |||  ||| |||||||    
T  14212959 aatcgaacctgagacctctggaggagcaaactccaagatcccgagccaaccattaggtcaatcccaaat 14212891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 17081202 - 17081258
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||||||| |||| ||| |||||||||||| |||| ||||| |||||    
T  17081202 tggaggagcaaactccaagatcctaagccaaccactagactaacctcaaatgggttg 17081258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 17706437 - 17706489
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccac 82  Q
    |||||||| |||||  | |||||||||||||||||| ||||||||||||||||    
T  17706437 aatcgaacttgagacttctggaggagcaaactccaagatcccaagtcaaccac 17706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 3386533 - 3386479
Alignment:
Q  250 agtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||||||||| |||||  |||| ||||||||||||||||| |||||| ||||||    
T  3386533 agtacgcaaaaccaattccaaaataatagaatacgacaaatatatttagttttaa 3386479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 9690767 - 9690833
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaacccca 95  Q
    ||||||||||| ||| || |||| ||||||||||||||||| |||  ||||||||||  ||||||||    
T  9690767 aaatcgaacctaagacctctggaagagcaaactccaaaatctcaaaccaaccactaggtcaacccca 9690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 1345002 - 1344936
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || ||||||| |||||||||| ||||||   ||||||||||  |||||||||||    
T  1345002 aatcgaacctgagacctctggaggaacaaactccaagatccca--ccaaccactaggtcaaccccaaat 1344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 21148664 - 21148713
Alignment:
Q  54 agcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||| |||||||| |||||||||| ||||| |||||| ||||    
T  21148664 agcaaactccaagatcccaagccaaccactaggccaactccaaatgggtt 21148713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 28968166 - 28968222
Alignment:
Q  24 agagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacc 80  Q
    ||||| ||||||| |||||| || | |||||||||||||||| |||||||| |||||    
T  28968166 agagagaatcgaatctgagacctctagaggagcaaactccaagatcccaagccaacc 28968222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 25852281 - 25852208
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  25852281 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 25852208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 46714460 - 46714385
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    ||||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  46714460 aaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 46714385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 40058975 - 40059057
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    |||||| |||||||||||||| || | |||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||    
T  40058975 cagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttga 40059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 54127476 - 54127545
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  54127476 gaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 54127545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 19660651 - 19660735
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| |||| ||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||| |||||| ||||    
T  19660651 gcatcagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaaatgggtt 19660735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 51535680 - 51535612
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  51535680 aatcgaacctgagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaaccctaaat 51535612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 52983686 - 52983612
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||||||||| || |||||||||||||||||| ||| |||| |||||||||| |||||||||||| |||||    
T  52983686 aatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggttg 52983612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 1985903 - 1985830
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||| ||||||| ||||    
T  1985903 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggtt 1985830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 32986260 - 32986191
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  32986260 gaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32986191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 34844881 - 34844962
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||| |||||||||||||| || |||||||||||||||||| ||| ||||  ||||||||| |||||||||||| |||||    
T  34844881 cagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaatgggttg 34844962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 13873425 - 13873493
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||  ||||||||| ||||||||||||    
T  13873425 aatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaaccccaaat 13873493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 32942448 - 32942368
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaata 99  Q
    |||||||||| |||||||||| | | || |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  32942448 gcatcagagagaatcgaaccttaaacctctggaggagtaaactccaagatctcaagccaaccactagaccaaccccaaata 32942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 42245813 - 42245745
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||| |||| |||| ||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  42245813 aatcgaacccgagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaat 42245745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 35229235 - 35229172
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccc 93  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||    
T  35229235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 35229172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 45787823 - 45787901
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||  ||||||||||||||||| |||||||||||| ||||| || ||||| |||||||||| ||||||||||||    
T  45787823 gcatcagagggaatcgaacctgagatctctggaggagcaaa-tccaagattccaagccaaccactaggccaaccccaaat 45787901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 43719189 - 43719263
Alignment:
Q  24 agagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| |||||||||||| | || |||||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  43719189 agagagaatcgaacctgaaacctctggaggagcaaactccaagatctcaaaccaaccactagaccaaccccaaat 43719263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 22625200 - 22625273
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||| ||||||||| |||||||| |||||||||| |||||| ||||| ||||    
T  22625200 aatcgaacctgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacctcaaatgggtt 22625273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 27528925 - 27528990
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaacccca 95  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||  |||||||||    
T  27528925 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaacccca 27528990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 33696413 - 33696482
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||| |||| ||||    
T  33696413 gaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaatgggtt 33696482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 35674871 - 35674944
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||| || ||||||| ||||||||||||| |||||||| |||||||| | |||||||||||| ||||    
T  35674871 aatcgaacctgtgacctttggaagagcaaactccaagatcccaagccaaccacttggccaaccccaaatgggtt 35674944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 5609325 - 5609405
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| |||||||||||||| |  || | ||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  5609325 cagagagaatcgaacctgagaccactgaatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 5609405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 34835596 - 34835528
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||| ||||| |||  ||||||||||||| || |||||||| |||||||||||||||||||||||    
T  34835596 aatcgaacatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccccaaat 34835528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 34722219 - 34722164
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||||||| |||||||| |||||||||  |||||||||||||||||    
T  34722219 tggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaataggtt 34722164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 7392093 - 7392143
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacc 80  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  7392093 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 7392143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 20566398 - 20566348
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  20566398 tggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 20566348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 44343581 - 44343507
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtc-aaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||  |||||| |||||||||||||| |||||||| | ||||||||| |||||||||||||||||    
T  44343581 aatcgaacttgagtcctttgggggagcaaactccaagatcccaagccaaaccactagcccaaccccaaataggtt 44343507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 43352447 - 43352520
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaa 96  Q
    |||||| ||||||||||||| ||||  |||||||||||||||  ||| |||| |||||| ||||||||||||||    
T  43352447 cagagagaatcgaacctgagttcttgagaggagcaaactccatgatctcaagccaaccattagaccaaccccaa 43352520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 27907705 - 27907828
Alignment:
Q  186 ttttaaaaacattcatttgctta-tggtaagcatgtcttttaaaaatcaattcaatttatacaaaagtacgcaaaatcaattttaaaacaatagaatacg 284  Q
    |||||||||||||| |||  ||| |||||| ||||||||  ||| || ||||||||| ||| | || |||  ||||||||||  ||||||||| ||||||    
T  27907705 ttttaaaaacattcgtttttttaatggtaaacatgtcttagaaagattaattcaattcataaacaaatacttaaaatcaattcaaaaacaatataatacg 27907804  T
Q  285 acaaatttatttacttttaaacaaa 309  Q
    |||||||||| || |||||||||||    
T  27907805 acaaatttatcta-ttttaaacaaa 27907828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 33992700 - 33992620
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| |||||||||| ||| || |||||||||||||||||| |||||||  ||||||||||  |||||| |||| ||||    
T  33992700 cagagagaatcgaacctaagacctctggaggagcaaactccaagatcccaaaccaaccactaggtcaaccctaaatgggtt 33992620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 49287932 - 49287872
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccact 83  Q
    |||||| |||||||||||||| || |||||||||||||||||| |||||||  ||||||||    
T  49287932 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccact 49287872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 31293010 - 31293071
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||| ||||| ||||||||||||| |||| |||| ||||| ||||||||||||| ||||||    
T  31293010 atacataagtaagcaaaatcaatttcaaaataataaaatacaacaaatttatttaattttaa 31293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 36131640 - 36131713
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||||||||||||  | ||||||| | |||||||||||||||||  ||||||||  |||||||||||| ||||    
T  36131640 aatcgaacctgagacatctggaggaacgaactccaaaatcccaagcaaaccactatgccaaccccaaatgggtt 36131713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 55961890 - 55961939
Alignment:
Q  48 tggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaa 97  Q
    |||||||||||||||||| |||||||| |||||||||| |||| ||||||    
T  55961890 tggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaa 55961939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 2351080 - 2351020
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaa 90  Q
    |||||||||||||| || |||||||||||||| ||| || ||||| |||||||||| ||||    
T  2351080 aatcgaacctgagacctctggaggagcaaacttcaagattccaagccaaccactaggccaa 2351020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 13584384 - 13584452
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||| |||||  |||||||||||||||||||| ||| || | |||||||||| |||||| |||||    
T  13584384 aatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacctcaaat 13584452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 18875636 - 18875700
Alignment:
Q  20 catcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccacta 84  Q
    ||||||||  |||||||||||||||||||| || | ||||||| ||||||||||  |||||||||    
T  18875636 catcagagggaatcgaacctgagatctttgaagaaacaaactctaaaatcccaaaccaaccacta 18875700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 40252365 - 40252297
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||| ||||| |||  ||| |||| ||||||| || |||||||||| ||||||||||||||||||    
T  40252365 aatcgaacttgagaccttgagagaagcacactccaagattccaagtcaactactagaccaaccccaaat 40252297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 41621719 - 41621799
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||| ||||| ||| ||||| |||  |||||||||||||||| ||| |||| |||||| ||| |||||||||||| ||||    
T  41621719 cagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattaggccaaccccaaatgggtt 41621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 9646336 - 9646415
Alignment:
Q  20 catcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaata 99  Q
    ||||||||| |||| ||| ||||| |||   ||||||| |||| || |||||||  ||||||||||||||||||||||||    
T  9646336 catcagagagaatcaaacatgagaccttgacaggagcacactcaaagatcccaaaccaaccactagaccaaccccaaata 9646415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 41085104 - 41085025
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||| |||||||| | ||| |||   ||||| | ||||||| ||| |||||||||||||||| |||||||||||    
T  41085104 gcatcagagagaatcgaacattagaccttgaaaggaggacactccaagatctcaagtcaaccactagatcaaccccaaat 41085025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 51961953 - 51961899
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaa 73  Q
    ||||||||||||||||||||||| |||| |||| || |||| ||||| |||||||    
T  51961953 gcatcagagaaaatcgaacctgaaatctctggaagaacaaattccaagatcccaa 51961899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 13550268 - 13550207
Alignment:
Q  37 cctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||| || | |||||||||||||| | ||| ||||||||||||||| |||||| |||||    
T  13550268 cctgagacctctagaggagcaaactcccagatctcaagtcaaccactaggccaaccgcaaat 13550207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 20078114 - 20078163
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaac 79  Q
    |||| ||||||||| || |||||||||||||||||| |||||||| ||||    
T  20078114 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaac 20078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 10125823 - 10125783
Alignment:
Q  56 caaactccaaaatcccaagtcaaccactagaccaaccccaa 96  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  10125823 caaactccaagatcccaagtcaaccactaggccaactccaa 10125783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 13771603 - 13771687
Alignment:
Q  20 catcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    ||||||||  |||||||  ||||| |||  || ||||||||| ||| |||||||| ||||||  ||||||||||||||| |||||    
T  13771603 catcagagggaatcgaatttgagaccttgagatgagcaaacttcaagatcccaagccaaccatcagaccaaccccaaatgggttg 13771687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 39343548 - 39343473
Alignment:
Q  23 cagagaaaatcgaacctgagatctttgga-ggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||| |||||||||||| | ||||| | ||||||  ||||||||||| || ||||| ||||||||||||||||||    
T  39343548 cagagagaatcgaacctgaaa-ctttgaaaggagcacgctccaaaatcctaactcaacgactagaccaaccccaaat 39343473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 15038026 - 15037953
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||    
T  15038026 aatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaatgggtt 15037953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 44946183 - 44946256
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  44946183 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 44946256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 25293233 - 25293158
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    |||||||||||||| || | |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  25293233 aatcgaacctgagacctctcgaggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatgggttga 25293158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 11941344 - 11941413
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  11941344 gaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 11941413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 4852625 - 4852557
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||||||||||  |||||||||||    
T  4852625 aatcgaacctgagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaaccccaaat 4852557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 18976555 - 18976629
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||| ||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  18976555 aatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 18976629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 33827703 - 33827776
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || ||||||||||| |||||| |||||||| |||||||||| |||||||||||| ||||    
T  33827703 aatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaatgggtt 33827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 40997484 - 40997548
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  40997484 gaacatgagacctttggaggagcaaactccaagatcccaagtcaaccactagacccacctcaaat 40997548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 44976284 - 44976352
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || ||||||||||||| |||| |||||||| |||||||||| ||||||||||||    
T  44976284 aatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaaccccaaat 44976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 24196071 - 24195998
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||| | || ||||||||| ||| ||||||||||||| |||||||||| |||||||||||| ||||    
T  24196071 aatcgaacctgaaacctctggaggagcgaaccccaaaatcccaagccaaccactaggccaaccccaaatgggtt 24195998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 8192481 - 8192549
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| |||  |||||||| ||||||| |||||||| |||||||||| ||||||||||||    
T  8192481 aatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaat 8192549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 17324833 - 17324765
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| || ||||  |||||||||| ||||||||||||    
T  17324833 aatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaaccccaaat 17324765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 30466953 - 30467033
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| |||||||||||||| || | ||||| |||||||||| |||||||  |||||||||| |||||||||||| ||||    
T  30466953 cagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatgggtt 30467033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 27290655 - 27290600
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactag 85  Q
    |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||    
T  27290655 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 27290600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 32845158 - 32845083
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    |||||||||||| |  |||||||||||||||||||| ||||||||  ||| ||||| |||||||||||| ||||||    
T  32845158 aatcgaacctgaaacttttggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggttga 32845083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 10582120 - 10582174
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccacta 84  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||    
T  10582120 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 10582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 29361630 - 29361578
Alignment:
Q  20 catcagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaa 73  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  29361630 catcagaggaaatcga-cctgagatctttggaggagcaaactccaagatcccaa 29361578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 36390691 - 36390769
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    ||||| ||||||||||||||| |||||||| |||||||||  | |||||||  |||||||||| |||||||||||| ||||    
T  36390691 cagaggaaatcgaacctgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaaccccaaatgggtt 36390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 41314059 - 41313986
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || |||||||||||||||||| |||||||  |||||||||   ||||||||||| ||||    
T  41314059 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactacggcaaccccaaatgggtt 41313986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 4567560 - 4567635
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| |||||||||||||||  | || ||||||||||| ||| |||||||| |||| ||||| ||||||||||||    
T  4567560 cagaggaaatcgaacctgagacttctgaaggagcaaacttcaagatcccaagccaactactaggccaaccccaaat 4567635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 14946853 - 14946778
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||||| | | |||  |||||||||||| ||| ||| ||||||||||||||| ||||| ||||||    
T  14946853 cagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctcaagtcaaccactaggccaactccaaat 14946778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 5394084 - 5394034
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacc 80  Q
    |||||||||||||| ||||||||||||||||||||| ||| |||| |||||    
T  5394084 aatcgaacctgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 6714411 - 6714484
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| ||||||||| || |||||||||||||||||| ||| |||| |||||| ||| |||| ||||||| ||||    
T  6714411 aatcaaacctgagacctctggaggagcaaactccaagatctcaagccaaccattaggccaatcccaaatgggtt 6714484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 20297642 - 20297557
Alignment:
Q  19 gcatcagagaaaatcgaacctgagatctttggaggagcaaactccaaa-atcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||||||| |||||| |||  |||||||| | |||||| |||||||| |||||||| | |||||||||||| ||||    
T  20297642 gcatcagaaaaaatcgaatctgagaccttgagaggagcacattccaaagatcccaagccaaccactgggccaaccccaaatgggtt 20297557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 32526215 - 32526288
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| |||  |||||||||||| ||| ||||||| ||||||||||  ||||| |||||| ||||    
T  32526215 aatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaactccaaatgggtt 32526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 918849 - 918897
Alignment:
Q  50 gaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||| |||||||||||| ||||||||||  |||||||||||    
T  918849 gaggagcaaacttcaaaatcccaagccaaccactaggtcaaccccaaat 918897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 18692049 - 18691981
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||||||||  || ||||| |||||||||| |||||  ||||| ||| ||||||||||||    
T  18692049 aatcgaacctgagatcttgagatgagcacactccaaaattccaagcaaaccattaggccaaccccaaat 18691981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 19054092 - 19054024
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||| ||||||||| ||||||||||||| ||||||| ||| |||| ||| |||||| || |||||||||    
T  19054092 aatcaaacctgagacctttggaggagcagactccaagatctcaagccaatcactaggcccaccccaaat 19054024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 41329910 - 41329842
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||| |||| | |||||||||||||||||| || |||||||   ||||||||| ||||||||||||    
T  41329910 aatcgaatctgaaacctttggaggagcaaactctaagatcccaaactaaccactaggccaaccccaaat 41329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 34516538 - 34516589
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacca 81  Q
    |||||||||||| | || |||||||||||||||||| |||||||| ||||||    
T  34516538 aatcgaacctgaaacctctggaggagcaaactccaagatcccaagccaacca 34516589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 1845787 - 1845853
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaa 96  Q
    ||||||| |||| || ||| |||||||||||||||| |||||||| |||||| |  |||||||||||    
T  1845787 aatcgaatctgaaatttttagaggagcaaactccaagatcccaagccaaccaatgtaccaaccccaa 1845853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 4618814 - 4618880
Alignment:
Q  29 aaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaacccca 95  Q
    ||||||||||||| | |||  |||||||| ||||||| || ||||| |||||||||| |||||||||    
T  4618814 aaatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactaggccaacccca 4618880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 27269495 - 27269553
Alignment:
Q  45 ctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||| ||||||||||||| || |||||||| |||||||||  |||||||||||| ||||    
T  27269495 ctttagaggagcaaactcgaagatcccaagccaaccactatgccaaccccaaatgggtt 27269553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 43374455 - 43374505
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacc 80  Q
    |||||||||||||| || || ||||||||||||||| |||||||| |||||    
T  43374455 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaacc 43374505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 44610140 - 44610090
Alignment:
Q  31 atcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaacca 81  Q
    ||||||||||||| ||||||| ||||||||||||| ||| |||| ||||||    
T  44610140 atcgaacctgagacctttggaagagcaaactccaagatctcaagccaacca 44610090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 38784309 - 38784377
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||| ||| |||  |||||||||||||||| |||| ||  ||| ||||||| |||||||||||    
T  38784309 aatcgaaccttagaacttgagaggagcaaactccaagatcctaacccaaacactagatcaaccccaaat 38784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 8530 - 8610
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||| |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  8530 cagagataatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 8610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 10816 - 10891
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| ||||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  10816 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 10891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 12123 - 12198
Alignment:
Q  23 cagagaaaatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||| ||||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  12123 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 12198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 9429 - 9497
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  9429 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 9497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 66829 - 66756
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||    
T  66829 aatcgaacgtgagacctttggaggagcaaactccaagatcccaagccaaccactagaccaatcccaaatgggtt 66756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 97496 - 97569
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||| |||||||||||| ||||    
T  97496 aatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatgggtt 97569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 1186 - 1254
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  1186 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 1254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 27843 - 27768
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttga 105  Q
    ||||||||| |||| |||  ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  27843 aatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatgggttga 27768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 8309 - 8383
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggttg 104  Q
    |||||||| ||||| || |||||||||||||||||| ||||| || ||||||||| ||||||||||||| |||||    
T  8309 aatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgggttg 8383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 15054 - 14985
Alignment:
Q  34 gaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||| || |||||||||||||||||| |||||| | |||||||||| |||||||||||| ||||    
T  15054 gaacctgagacctctggaggagcaaactccaagatcccaggccaaccactaggccaaccccaaatgggtt 14985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 40392 - 40319
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaataggtt 103  Q
    |||||||||||||| || || ||||||||||||||| |||| ||| |||||||||| |||||||||||| ||||    
T  40392 aatcgaacctgagacctctgaaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 40319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 53001 - 53069
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaaccccaaat 98  Q
    ||||||||||||   || |||||||||||||||||| |||||||| |||||||||| |||| |||||||    
T  53001 aatcgaacctgaagcctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaat 53069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 88 - 150
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaagtcaaccactagaccaacc 92  Q
    |||||||||||||| || |||| ||||||||||||| ||| |||| |||||||||| ||||||    
T  88 aatcgaacctgagacctctggacgagcaaactccaagatcacaagccaaccactaggccaacc 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 161876 - 161832
Alignment:
Q  30 aatcgaacctgagatctttggaggagcaaactccaaaatcccaag 74  Q
    |||||||||||||| || |||||||||||||||||| ||||||||    
T  161876 aatcgaacctgagacctctggaggagcaaactccaagatcccaag 161832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 45731 - 45792
Alignment:
Q  243 atacaaaagtacgcaaaatcaattttaaaacaatagaatacgacaaatttatttacttttaa 304  Q
    ||||||||||| |||||||  |||  ||||  ||||||||||||||||||||||| ||||||    
T  45731 atacaaaagtatgcaaaatagattcgaaaatgatagaatacgacaaatttatttagttttaa 45792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University