View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13306_low_17 (Length: 339)
Name: NF13306_low_17
Description: NF13306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13306_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 42248305 - 42248470
Alignment:
| Q |
156 |
ttaaattgaaattatgtaaatccctttctaagcttatgttaaatttctacaagttcaagactggttagttgattacggtttgaaacaattcatatattat |
255 |
Q |
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| T |
42248305 |
ttaaattgaaattatgtaaatccctttctaagcttatgttaaatttctgcaagttcaagactggttagttgattacagtttgaaacaattcatatattat |
42248404 |
T |
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| Q |
256 |
cattaaggaagataattaaaaatgttcaagtttgaagtttagaaagtgaaattctcaagattgttc |
321 |
Q |
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| T |
42248405 |
cattaaggaagataattaaaaatgttcaagtttgaagtttagaaagtgaaattctcaagattgttc |
42248470 |
T |
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