View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13307_high_1 (Length: 631)

Name: NF13307_high_1
Description: NF13307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13307_high_1
NF13307_high_1
[»] chr3 (81 HSPs)
chr3 (150-309)||(12917211-12917370)
chr3 (156-309)||(3527068-3527221)
chr3 (137-309)||(25202124-25202295)
chr3 (176-309)||(22841210-22841343)
chr3 (159-308)||(14641463-14641611)
chr3 (170-309)||(45803257-45803395)
chr3 (140-309)||(48043372-48043540)
chr3 (375-500)||(16979712-16979837)
chr3 (150-308)||(29907628-29907785)
chr3 (150-308)||(29948794-29948951)
chr3 (150-308)||(29997948-29998105)
chr3 (245-309)||(54875474-54875538)
chr3 (150-307)||(24548867-24549016)
chr3 (413-500)||(26054598-26054685)
chr3 (235-309)||(14442163-14442237)
chr3 (413-499)||(22652574-22652660)
chr3 (240-309)||(2841501-2841570)
chr3 (240-297)||(6156710-6156767)
chr3 (241-309)||(6159393-6159461)
chr3 (240-308)||(14520435-14520503)
chr3 (150-275)||(21845561-21845682)
chr3 (375-459)||(6805054-6805138)
chr3 (244-308)||(14152398-14152462)
chr3 (240-308)||(17208513-17208581)
chr3 (245-309)||(17669698-17669762)
chr3 (245-309)||(17684835-17684899)
chr3 (413-500)||(15465896-15465983)
chr3 (413-499)||(5224126-5224211)
chr3 (244-309)||(24547188-24547253)
chr3 (378-450)||(12917443-12917515)
chr3 (257-309)||(50755266-50755318)
chr3 (180-308)||(3160561-3160689)
chr3 (240-308)||(5215636-5215704)
chr3 (566-621)||(12918472-12918526)
chr3 (241-308)||(15566733-15566800)
chr3 (566-617)||(25200864-25200914)
chr3 (566-621)||(48630228-48630282)
chr3 (244-309)||(16050915-16050980)
chr3 (240-293)||(19568203-19568256)
chr3 (566-621)||(3528589-3528643)
chr3 (240-275)||(13185917-13185952)
chr3 (240-275)||(40808018-40808053)
chr3 (240-275)||(40812855-40812890)
chr3 (240-275)||(44274440-44274475)
chr3 (412-478)||(43549818-43549884)
chr3 (412-478)||(55291764-55291830)
chr3 (256-309)||(2247877-2247930)
chr3 (242-275)||(5200240-5200273)
chr3 (159-208)||(10558981-10559030)
chr3 (112-208)||(48631435-48631538)
chr3 (234-302)||(6003181-6003248)
chr3 (159-203)||(6468254-6468298)
chr3 (159-203)||(10380031-10380075)
chr3 (573-621)||(15026304-15026351)
chr3 (240-275)||(10563730-10563765)
chr3 (244-275)||(15446867-15446898)
chr3 (240-275)||(33565109-33565144)
chr3 (240-275)||(35960923-35960958)
chr3 (375-450)||(45803464-45803539)
chr3 (235-293)||(9510906-9510964)
chr3 (235-293)||(9518881-9518939)
chr3 (241-275)||(11563747-11563781)
chr3 (245-275)||(17044988-17045018)
chr3 (245-275)||(17047148-17047178)
chr3 (241-275)||(17518869-17518903)
chr3 (241-275)||(17533731-17533765)
chr3 (245-275)||(17541456-17541486)
chr3 (245-275)||(22306583-22306613)
chr3 (390-468)||(29907468-29907546)
chr3 (390-468)||(29948634-29948712)
chr3 (390-468)||(29997788-29997866)
chr3 (159-193)||(46823180-46823214)
chr3 (237-275)||(48631353-48631391)
chr3 (241-275)||(49900752-49900786)
chr3 (412-474)||(50350981-50351043)
chr3 (244-293)||(24177735-24177784)
chr3 (412-476)||(42353-42417)
chr3 (573-621)||(6002012-6002059)
chr3 (412-468)||(13437072-13437128)
chr3 (375-459)||(13522475-13522559)
chr3 (245-273)||(41172371-41172399)
[»] chr8 (65 HSPs)
chr8 (150-309)||(22610172-22610331)
chr8 (150-307)||(20879463-20879619)
chr8 (156-309)||(23884159-23884309)
chr8 (176-309)||(22483926-22484058)
chr8 (176-309)||(22345152-22345286)
chr8 (176-309)||(22356812-22356946)
chr8 (159-308)||(22208258-22208405)
chr8 (240-309)||(21399705-21399774)
chr8 (240-309)||(21794198-21794267)
chr8 (375-500)||(16198636-16198761)
chr8 (375-497)||(25657641-25657763)
chr8 (93-307)||(36305988-36306212)
chr8 (79-187)||(36732246-36732353)
chr8 (413-500)||(14397074-14397160)
chr8 (375-479)||(12037291-12037395)
chr8 (240-308)||(18816290-18816358)
chr8 (249-309)||(22483774-22483834)
chr8 (375-497)||(23478885-23479007)
chr8 (91-156)||(36404982-36405047)
chr8 (245-297)||(18834422-18834474)
chr8 (244-308)||(36732411-36732475)
chr8 (245-308)||(21514680-21514743)
chr8 (245-308)||(22258306-22258369)
chr8 (91-156)||(22474897-22474962)
chr8 (244-308)||(4380616-4380680)
chr8 (244-308)||(12577869-12577932)
chr8 (91-178)||(4380463-4380550)
chr8 (235-293)||(22532122-22532180)
chr8 (235-293)||(22536807-22536865)
chr8 (413-500)||(19880630-19880710)
chr8 (92-156)||(17978263-17978327)
chr8 (235-275)||(20397500-20397540)
chr8 (234-302)||(22708313-22708380)
chr8 (237-308)||(21678838-21678907)
chr8 (566-621)||(23885394-23885448)
chr8 (241-275)||(20022036-20022070)
chr8 (159-208)||(17611210-17611259)
chr8 (244-293)||(17906848-17906897)
chr8 (256-309)||(18023567-18023620)
chr8 (239-308)||(21676494-21676561)
chr8 (413-496)||(26454517-26454593)
chr8 (256-309)||(38184923-38184976)
chr8 (573-621)||(22310686-22310733)
chr8 (244-275)||(5761555-5761586)
chr8 (240-275)||(6101748-6101783)
chr8 (244-275)||(17158962-17158993)
chr8 (244-275)||(19880844-19880875)
chr8 (375-450)||(22483630-22483705)
chr8 (244-275)||(23479104-23479135)
chr8 (566-617)||(23882777-23882827)
chr8 (240-275)||(23899982-23900017)
chr8 (244-275)||(26454730-26454761)
chr8 (240-275)||(31722488-31722523)
chr8 (240-275)||(36727033-36727068)
chr8 (240-275)||(45469214-45469249)
chr8 (237-275)||(20517028-20517066)
chr8 (242-308)||(21676590-21676654)
chr8 (412-476)||(8413911-8413975)
chr8 (159-191)||(18834541-18834573)
chr8 (412-476)||(19882773-19882837)
chr8 (235-275)||(22317901-22317941)
chr8 (589-621)||(22343817-22343849)
chr8 (589-621)||(22355477-22355509)
chr8 (235-275)||(22474778-22474818)
chr8 (235-275)||(36405122-36405162)
[»] chr1 (71 HSPs)
chr1 (150-309)||(34392756-34392915)
chr1 (375-500)||(17901929-17902055)
chr1 (390-498)||(6833968-6834076)
chr1 (159-309)||(8306594-8306743)
chr1 (170-309)||(17901719-17901858)
chr1 (375-476)||(21239170-21239271)
chr1 (375-500)||(46197872-46197997)
chr1 (150-309)||(35895087-35895246)
chr1 (180-308)||(39061310-39061437)
chr1 (375-478)||(8306426-8306529)
chr1 (103-308)||(28476579-28476797)
chr1 (241-309)||(45499530-45499598)
chr1 (240-308)||(50544861-50544929)
chr1 (375-478)||(7052140-7052243)
chr1 (245-308)||(22145666-22145729)
chr1 (241-308)||(38056668-38056735)
chr1 (239-309)||(20588624-20588696)
chr1 (239-309)||(20593162-20593234)
chr1 (375-500)||(50001276-50001401)
chr1 (390-478)||(24723602-24723690)
chr1 (242-305)||(635001-635064)
chr1 (77-307)||(12710857-12711101)
chr1 (176-309)||(6834164-6834297)
chr1 (180-265)||(21187968-21188054)
chr1 (421-500)||(29763805-29763884)
chr1 (375-444)||(21243864-21243933)
chr1 (91-156)||(24719357-24719422)
chr1 (91-156)||(44892594-44892659)
chr1 (235-279)||(7703140-7703184)
chr1 (248-308)||(24719514-24719573)
chr1 (85-156)||(14792403-14792474)
chr1 (235-297)||(21168933-21168995)
chr1 (235-293)||(24723341-24723399)
chr1 (566-620)||(34391776-34391829)
chr1 (240-293)||(7051917-7051970)
chr1 (244-309)||(51336467-51336532)
chr1 (244-308)||(8275988-8276052)
chr1 (245-309)||(16401901-16401963)
chr1 (377-449)||(22145798-22145870)
chr1 (412-478)||(23194675-23194741)
chr1 (446-500)||(35894010-35894064)
chr1 (384-450)||(35894949-35895015)
chr1 (244-309)||(12327742-12327807)
chr1 (91-144)||(18121741-18121794)
chr1 (240-293)||(21239044-21239097)
chr1 (412-476)||(297181-297245)
chr1 (159-203)||(20846338-20846382)
chr1 (89-145)||(21187889-21187945)
chr1 (244-308)||(24007224-24007287)
chr1 (159-203)||(28193561-28193605)
chr1 (240-275)||(4595848-4595883)
chr1 (240-275)||(13302924-13302959)
chr1 (244-275)||(29763631-29763662)
chr1 (240-275)||(42913071-42913106)
chr1 (244-275)||(46197744-46197775)
chr1 (235-265)||(7320584-7320614)
chr1 (241-275)||(16058310-16058344)
chr1 (245-275)||(19676733-19676763)
chr1 (234-308)||(20708048-20708121)
chr1 (245-275)||(21046049-21046079)
chr1 (412-478)||(22130188-22130254)
chr1 (159-193)||(38056589-38056623)
chr1 (235-293)||(51324508-51324566)
chr1 (171-208)||(14237582-14237619)
chr1 (379-500)||(21188164-21188284)
chr1 (176-275)||(21243688-21243788)
chr1 (171-208)||(46560166-46560203)
chr1 (573-621)||(6832971-6833018)
chr1 (573-621)||(12709490-12709537)
chr1 (573-621)||(20709262-20709309)
chr1 (573-617)||(21190538-21190581)
[»] chr7 (85 HSPs)
chr7 (137-307)||(38299738-38299908)
chr7 (137-309)||(36300533-36300705)
chr7 (375-497)||(19282849-19282971)
chr7 (375-500)||(13315208-13315333)
chr7 (176-309)||(13315012-13315146)
chr7 (176-309)||(13744440-13744574)
chr7 (176-309)||(18570635-18570768)
chr7 (375-478)||(47975018-47975121)
chr7 (176-309)||(15700666-15700799)
chr7 (241-309)||(58409-58477)
chr7 (244-308)||(8488093-8488157)
chr7 (244-308)||(8513752-8513816)
chr7 (237-309)||(33556097-33556169)
chr7 (180-309)||(8930700-8930829)
chr7 (375-478)||(12754792-12754895)
chr7 (375-500)||(16550129-16550254)
chr7 (375-500)||(16615408-16615533)
chr7 (375-500)||(32160327-32160452)
chr7 (240-308)||(708424-708492)
chr7 (161-275)||(12127080-12127193)
chr7 (240-308)||(15575644-15575712)
chr7 (413-500)||(1856564-1856651)
chr7 (413-500)||(13917736-13917823)
chr7 (242-309)||(16250219-16250286)
chr7 (235-309)||(15720767-15720841)
chr7 (240-309)||(20252177-20252246)
chr7 (375-468)||(38295434-38295527)
chr7 (235-308)||(47095441-47095514)
chr7 (245-298)||(43276744-43276797)
chr7 (245-309)||(25943255-25943319)
chr7 (244-308)||(43745645-43745709)
chr7 (240-299)||(18874660-18874719)
chr7 (241-308)||(19195601-19195667)
chr7 (413-500)||(25926463-25926550)
chr7 (566-621)||(36301872-36301926)
chr7 (91-157)||(4690510-4690575)
chr7 (245-302)||(19283051-19283108)
chr7 (91-156)||(43745797-43745862)
chr7 (102-187)||(48212584-48212668)
chr7 (249-309)||(15700887-15700947)
chr7 (244-309)||(48212726-48212793)
chr7 (566-621)||(37538116-37538170)
chr7 (240-298)||(3287743-3287801)
chr7 (171-275)||(44374865-44374968)
chr7 (171-275)||(44383730-44383833)
chr7 (566-619)||(38294197-38294249)
chr7 (244-308)||(4690662-4690726)
chr7 (170-269)||(16463097-16463196)
chr7 (235-275)||(24269937-24269977)
chr7 (573-621)||(33059348-33059395)
chr7 (176-275)||(37539470-37539570)
chr7 (375-427)||(48274357-48274409)
chr7 (240-275)||(20586374-20586409)
chr7 (240-275)||(48807320-48807355)
chr7 (412-478)||(4325919-4325985)
chr7 (412-478)||(14105590-14105656)
chr7 (412-478)||(14415607-14415673)
chr7 (170-208)||(19195714-19195752)
chr7 (390-459)||(708663-708732)
chr7 (413-500)||(29052347-29052427)
chr7 (204-275)||(8851120-8851189)
chr7 (573-621)||(11314302-11314349)
chr7 (241-293)||(20214151-20214203)
chr7 (414-478)||(37539270-37539334)
chr7 (244-275)||(4071842-4071873)
chr7 (244-275)||(12754611-12754642)
chr7 (240-275)||(14218890-14218925)
chr7 (244-275)||(29052181-29052212)
chr7 (566-621)||(33557329-33557383)
chr7 (244-275)||(35771440-35771471)
chr7 (245-275)||(12372296-12372326)
chr7 (245-275)||(12465260-12465290)
chr7 (245-275)||(13147472-13147502)
chr7 (245-275)||(16078352-16078382)
chr7 (412-478)||(44190379-44190445)
chr7 (256-309)||(831861-831914)
chr7 (256-309)||(1197041-1197094)
chr7 (244-293)||(47974819-47974868)
chr7 (204-275)||(12322891-12322960)
chr7 (235-275)||(15095627-15095667)
chr7 (573-621)||(21660083-21660130)
chr7 (245-293)||(33002157-33002205)
chr7 (231-275)||(33060460-33060504)
chr7 (112-160)||(42565691-42565739)
chr7 (412-468)||(42565996-42566052)
[»] scaffold0086 (2 HSPs)
scaffold0086 (150-309)||(35091-35250)
scaffold0086 (414-478)||(35652-35716)
[»] chr4 (50 HSPs)
chr4 (156-309)||(9622477-9622630)
chr4 (156-309)||(10273371-10273525)
chr4 (176-309)||(55583184-55583322)
chr4 (150-275)||(13165154-13165279)
chr4 (102-309)||(25513839-25514059)
chr4 (375-497)||(10694372-10694494)
chr4 (375-478)||(16296693-16296796)
chr4 (376-478)||(35660710-35660812)
chr4 (240-308)||(14631124-14631192)
chr4 (240-308)||(16296927-16296995)
chr4 (375-478)||(14549472-14549575)
chr4 (413-500)||(15008768-15008855)
chr4 (413-497)||(10908176-10908260)
chr4 (241-308)||(9638999-9639066)
chr4 (375-478)||(19434786-19434889)
chr4 (198-308)||(33186892-33187000)
chr4 (91-153)||(2424233-2424295)
chr4 (245-308)||(12424290-12424355)
chr4 (244-305)||(13847193-13847254)
chr4 (375-500)||(40620332-40620457)
chr4 (91-178)||(19565764-19565851)
chr4 (240-308)||(15239811-15239879)
chr4 (244-307)||(26446197-26446260)
chr4 (240-293)||(19434554-19434607)
chr4 (91-144)||(26921354-26921407)
chr4 (251-308)||(35660945-35661002)
chr4 (569-621)||(9621355-9621406)
chr4 (159-203)||(15191285-15191329)
chr4 (566-621)||(10282899-10282953)
chr4 (91-178)||(12623419-12623506)
chr4 (240-275)||(15115244-15115279)
chr4 (182-307)||(18463014-18463139)
chr4 (89-157)||(18463152-18463220)
chr4 (244-307)||(2424386-2424449)
chr4 (240-275)||(9924176-9924211)
chr4 (240-275)||(14549782-14549817)
chr4 (244-275)||(15008985-15009016)
chr4 (244-275)||(21062663-21062694)
chr4 (240-275)||(37019692-37019727)
chr4 (245-275)||(11425965-11425995)
chr4 (231-305)||(14477624-14477697)
chr4 (259-309)||(15747787-15747837)
chr4 (245-275)||(25091675-25091705)
chr4 (245-275)||(35811376-35811406)
chr4 (241-275)||(40230328-40230362)
chr4 (245-275)||(53630474-53630504)
chr4 (235-275)||(12623338-12623378)
chr4 (573-617)||(14476524-14476567)
chr4 (241-277)||(19022364-19022400)
chr4 (412-476)||(28386069-28386133)
[»] scaffold0048 (2 HSPs)
scaffold0048 (156-309)||(68637-68790)
scaffold0048 (91-187)||(57084-57179)
[»] chr5 (41 HSPs)
chr5 (148-309)||(20313265-20313424)
chr5 (176-308)||(16063740-16063873)
chr5 (153-275)||(21504161-21504282)
chr5 (159-309)||(32607229-32607380)
chr5 (78-298)||(21398464-21398697)
chr5 (240-308)||(18744863-18744931)
chr5 (375-500)||(17011528-17011653)
chr5 (375-500)||(265838-265963)
chr5 (375-500)||(29448640-29448765)
chr5 (245-308)||(23199207-23199270)
chr5 (375-478)||(36508870-36508973)
chr5 (91-187)||(26750142-26750237)
chr5 (176-293)||(31622121-31622239)
chr5 (137-208)||(26758599-26758670)
chr5 (250-309)||(31621964-31622023)
chr5 (240-308)||(6551285-6551353)
chr5 (91-178)||(660907-660994)
chr5 (249-299)||(1627071-1627121)
chr5 (91-157)||(20197504-20197570)
chr5 (91-156)||(8833052-8833117)
chr5 (102-187)||(14025664-14025748)
chr5 (89-208)||(21404189-21404305)
chr5 (240-275)||(20469171-20469206)
chr5 (375-438)||(20765373-20765436)
chr5 (241-275)||(21300040-21300074)
chr5 (412-474)||(21398962-21399024)
chr5 (241-275)||(21617924-21617958)
chr5 (244-301)||(660785-660841)
chr5 (235-275)||(20566568-20566608)
chr5 (412-476)||(33472726-33472790)
chr5 (245-309)||(36508633-36508697)
chr5 (244-275)||(17011750-17011781)
chr5 (245-275)||(266060-266090)
chr5 (91-140)||(1626767-1626815)
chr5 (375-468)||(21503971-21504064)
chr5 (248-309)||(30616602-30616663)
chr5 (589-621)||(21402109-21402141)
chr5 (573-621)||(21403479-21403526)
chr5 (231-275)||(21404107-21404151)
chr5 (573-621)||(21419703-21419750)
chr5 (412-476)||(27868737-27868801)
[»] chr2 (54 HSPs)
chr2 (156-309)||(28344899-28345052)
chr2 (150-309)||(23801484-23801649)
chr2 (91-308)||(21369282-21369511)
chr2 (170-309)||(36734376-36734513)
chr2 (159-275)||(17307508-17307623)
chr2 (240-308)||(21315471-21315539)
chr2 (240-308)||(21335261-21335329)
chr2 (375-478)||(149633-149736)
chr2 (413-500)||(18358132-18358219)
chr2 (375-500)||(25183989-25184114)
chr2 (413-500)||(31345921-31346008)
chr2 (103-208)||(14179573-14179679)
chr2 (379-470)||(14183597-14183688)
chr2 (413-500)||(21915424-21915511)
chr2 (103-208)||(14183311-14183417)
chr2 (413-498)||(21081134-21081219)
chr2 (375-459)||(1383779-1383863)
chr2 (244-308)||(23610615-23610679)
chr2 (375-459)||(28652678-28652762)
chr2 (375-442)||(23801351-23801418)
chr2 (241-299)||(149497-149555)
chr2 (91-178)||(23610745-23610830)
chr2 (566-621)||(19196946-19197000)
chr2 (126-208)||(45528635-45528715)
chr2 (126-208)||(45536029-45536109)
chr2 (85-145)||(19647388-19647448)
chr2 (375-458)||(14179855-14179938)
chr2 (126-208)||(20005839-20005919)
chr2 (240-275)||(24516208-24516243)
chr2 (240-275)||(27852690-27852725)
chr2 (241-275)||(3539859-3539893)
chr2 (241-275)||(22501993-22502027)
chr2 (241-275)||(22509927-22509961)
chr2 (241-275)||(25142226-25142260)
chr2 (244-293)||(357885-357934)
chr2 (379-480)||(19647054-19647155)
chr2 (171-208)||(27852765-27852802)
chr2 (573-621)||(14184904-14184951)
chr2 (412-476)||(23338562-23338626)
chr2 (231-275)||(45535947-45535991)
chr2 (232-307)||(20005958-20006032)
chr2 (244-275)||(21080968-21080999)
chr2 (244-275)||(40912342-40912373)
chr2 (245-275)||(2523747-2523777)
chr2 (245-275)||(5031129-5031159)
chr2 (412-478)||(20590445-20590511)
chr2 (245-275)||(24780840-24780870)
chr2 (244-309)||(34491239-34491304)
chr2 (412-478)||(41301092-41301158)
chr2 (231-265)||(45528563-45528597)
chr2 (379-489)||(45535737-45535847)
chr2 (171-208)||(22695322-22695359)
chr2 (566-606)||(28346457-28346496)
chr2 (573-621)||(30212667-30212714)
[»] scaffold0035 (2 HSPs)
scaffold0035 (150-309)||(43692-43849)
scaffold0035 (150-283)||(39000-39132)
[»] chr6 (46 HSPs)
chr6 (375-500)||(29045064-29045189)
chr6 (150-275)||(1818974-1819099)
chr6 (156-306)||(13285739-13285890)
chr6 (159-308)||(19825401-19825549)
chr6 (203-309)||(10446205-10446311)
chr6 (170-264)||(35057577-35057671)
chr6 (176-309)||(29045259-29045392)
chr6 (375-500)||(15891696-15891821)
chr6 (375-500)||(15900781-15900906)
chr6 (413-497)||(27557467-27557551)
chr6 (413-500)||(23415706-23415793)
chr6 (235-308)||(18982561-18982634)
chr6 (244-308)||(21683074-21683138)
chr6 (241-308)||(23658078-23658145)
chr6 (86-187)||(21682916-21683016)
chr6 (375-459)||(25921842-25921926)
chr6 (432-499)||(15173637-15173704)
chr6 (245-308)||(20410512-20410575)
chr6 (235-275)||(30673392-30673432)
chr6 (180-283)||(34140390-34140493)
chr6 (180-283)||(34153006-34153109)
chr6 (566-621)||(10444944-10444998)
chr6 (240-275)||(15890707-15890742)
chr6 (566-621)||(35056134-35056188)
chr6 (235-293)||(19167843-19167901)
chr6 (235-293)||(19235127-19235185)
chr6 (235-293)||(28948579-28948637)
chr6 (569-621)||(1817795-1817846)
chr6 (573-621)||(13803022-13803069)
chr6 (244-308)||(15998878-15998942)
chr6 (375-459)||(25601453-25601537)
chr6 (237-307)||(18459296-18459366)
chr6 (240-275)||(24267871-24267906)
chr6 (245-275)||(7827994-7828024)
chr6 (235-293)||(18585809-18585867)
chr6 (241-275)||(18928703-18928737)
chr6 (245-275)||(23150287-23150317)
chr6 (159-193)||(23658190-23658224)
chr6 (159-193)||(34964099-34964133)
chr6 (122-187)||(22557358-22557422)
chr6 (412-476)||(13765172-13765236)
chr6 (204-275)||(19655192-19655261)
chr6 (412-476)||(23956688-23956752)
chr6 (204-275)||(27125438-27125507)
chr6 (412-476)||(31021884-31021948)
chr6 (414-478)||(35057366-35057430)
[»] scaffold0004 (6 HSPs)
scaffold0004 (375-500)||(66206-66330)
scaffold0004 (176-309)||(73075-73209)
scaffold0004 (176-309)||(75925-76059)
scaffold0004 (241-309)||(111348-111416)
scaffold0004 (173-309)||(66000-66136)
scaffold0004 (244-275)||(328287-328318)
[»] scaffold0369 (1 HSPs)
scaffold0369 (176-308)||(15547-15678)
[»] scaffold0031 (1 HSPs)
scaffold0031 (176-309)||(127273-127407)
[»] scaffold1939 (1 HSPs)
scaffold1939 (163-275)||(149-261)
[»] scaffold0878 (1 HSPs)
scaffold0878 (176-308)||(3353-3485)
[»] scaffold0057 (2 HSPs)
scaffold0057 (375-500)||(69980-70105)
scaffold0057 (244-275)||(69852-69883)
[»] scaffold0594 (2 HSPs)
scaffold0594 (375-474)||(2066-2165)
scaffold0594 (238-309)||(2235-2306)
[»] scaffold0148 (2 HSPs)
scaffold0148 (176-298)||(8843-8966)
scaffold0148 (375-468)||(8673-8766)
[»] scaffold0138 (4 HSPs)
scaffold0138 (375-500)||(20897-21022)
scaffold0138 (422-500)||(33913-33990)
scaffold0138 (244-275)||(21119-21150)
scaffold0138 (244-275)||(34134-34165)
[»] scaffold0098 (1 HSPs)
scaffold0098 (240-309)||(40095-40164)
[»] scaffold0046 (1 HSPs)
scaffold0046 (375-500)||(21904-22029)
[»] scaffold0730 (2 HSPs)
scaffold0730 (178-309)||(6437-6569)
scaffold0730 (375-468)||(6631-6724)
[»] scaffold0676 (2 HSPs)
scaffold0676 (241-308)||(2870-2937)
scaffold0676 (375-478)||(2636-2739)
[»] scaffold0149 (3 HSPs)
scaffold0149 (375-478)||(21362-21465)
scaffold0149 (240-292)||(21616-21668)
scaffold0149 (240-275)||(29568-29603)
[»] scaffold0026 (1 HSPs)
scaffold0026 (375-478)||(21944-22047)
[»] scaffold0213 (2 HSPs)
scaffold0213 (91-208)||(19308-19426)
scaffold0213 (241-308)||(19196-19263)
[»] scaffold0083 (3 HSPs)
scaffold0083 (375-500)||(1737-1862)
scaffold0083 (244-291)||(5044-5091)
scaffold0083 (244-291)||(10754-10801)
[»] scaffold0034 (1 HSPs)
scaffold0034 (375-500)||(29343-29468)
[»] scaffold1186 (1 HSPs)
scaffold1186 (240-308)||(2009-2077)
[»] scaffold0174 (3 HSPs)
scaffold0174 (241-309)||(19844-19912)
scaffold0174 (162-306)||(5445-5588)
scaffold0174 (245-309)||(11604-11668)
[»] scaffold0005 (1 HSPs)
scaffold0005 (240-308)||(186191-186259)
[»] scaffold0220 (3 HSPs)
scaffold0220 (241-308)||(13938-14005)
scaffold0220 (244-275)||(19976-20007)
scaffold0220 (159-191)||(14052-14084)
[»] scaffold0200 (1 HSPs)
scaffold0200 (413-500)||(18395-18482)
[»] scaffold0061 (4 HSPs)
scaffold0061 (185-307)||(14526-14648)
scaffold0061 (185-307)||(23584-23706)
scaffold0061 (413-476)||(14751-14814)
scaffold0061 (413-476)||(23809-23872)
[»] scaffold0282 (1 HSPs)
scaffold0282 (91-157)||(19099-19165)
[»] scaffold0436 (2 HSPs)
scaffold0436 (375-500)||(8760-8885)
scaffold0436 (244-275)||(8982-9013)
[»] scaffold0414 (1 HSPs)
scaffold0414 (245-306)||(11160-11221)
[»] scaffold0007 (3 HSPs)
scaffold0007 (235-308)||(16409-16482)
scaffold0007 (235-306)||(18691-18762)
scaffold0007 (585-620)||(83234-83269)
[»] scaffold0379 (3 HSPs)
scaffold0379 (77-309)||(10936-11180)
scaffold0379 (77-135)||(8286-8344)
scaffold0379 (77-135)||(15478-15536)
[»] scaffold0205 (1 HSPs)
scaffold0205 (150-309)||(5520-5678)
[»] scaffold0056 (3 HSPs)
scaffold0056 (244-308)||(18264-18328)
scaffold0056 (102-157)||(18415-18469)
scaffold0056 (240-275)||(67143-67178)
[»] scaffold0555 (1 HSPs)
scaffold0555 (241-304)||(8742-8805)
[»] scaffold0117 (1 HSPs)
scaffold0117 (413-500)||(42473-42560)
[»] scaffold0431 (1 HSPs)
scaffold0431 (245-308)||(5620-5685)
[»] scaffold0051 (1 HSPs)
scaffold0051 (413-495)||(31950-32031)
[»] scaffold0515 (2 HSPs)
scaffold0515 (423-500)||(4836-4913)
scaffold0515 (244-275)||(5051-5082)
[»] scaffold0401 (1 HSPs)
scaffold0401 (91-156)||(8962-9027)
[»] scaffold0306 (2 HSPs)
scaffold0306 (423-500)||(4836-4913)
scaffold0306 (244-275)||(5051-5082)
[»] scaffold0011 (2 HSPs)
scaffold0011 (102-187)||(33565-33649)
scaffold0011 (235-275)||(33476-33516)
[»] scaffold0231 (2 HSPs)
scaffold0231 (240-308)||(17516-17584)
scaffold0231 (159-203)||(23710-23754)
[»] scaffold0394 (2 HSPs)
scaffold0394 (566-621)||(8477-8531)
scaffold0394 (237-307)||(7506-7575)
[»] scaffold0293 (1 HSPs)
scaffold0293 (413-500)||(19463-19550)
[»] scaffold0247 (1 HSPs)
scaffold0247 (245-308)||(1065-1128)
[»] scaffold0139 (3 HSPs)
scaffold0139 (150-205)||(40051-40106)
scaffold0139 (244-304)||(23527-23587)
scaffold0139 (237-308)||(40153-40226)
[»] scaffold0853 (1 HSPs)
scaffold0853 (245-299)||(2454-2508)
[»] scaffold0462 (1 HSPs)
scaffold0462 (375-497)||(11026-11148)
[»] scaffold0039 (1 HSPs)
scaffold0039 (102-156)||(9785-9839)
[»] scaffold0017 (3 HSPs)
scaffold0017 (235-308)||(26716-26789)
scaffold0017 (85-145)||(23754-23814)
scaffold0017 (181-307)||(23604-23730)
[»] scaffold0516 (2 HSPs)
scaffold0516 (244-308)||(5304-5368)
scaffold0516 (150-208)||(5102-5160)
[»] scaffold0256 (1 HSPs)
scaffold0256 (378-438)||(1971-2031)
[»] scaffold0003 (1 HSPs)
scaffold0003 (237-309)||(96386-96458)
[»] scaffold1437 (1 HSPs)
scaffold1437 (91-178)||(183-270)
[»] scaffold0505 (1 HSPs)
scaffold0505 (245-308)||(4926-4988)
[»] scaffold0203 (1 HSPs)
scaffold0203 (241-308)||(17936-18003)
[»] scaffold1256 (2 HSPs)
scaffold1256 (150-208)||(2094-2152)
scaffold1256 (244-308)||(2199-2263)
[»] scaffold0439 (1 HSPs)
scaffold0439 (103-156)||(4562-4615)
[»] scaffold0337 (1 HSPs)
scaffold0337 (89-275)||(3226-3402)
[»] scaffold0328 (1 HSPs)
scaffold0328 (241-286)||(18636-18681)
[»] scaffold0116 (1 HSPs)
scaffold0116 (154-206)||(46003-46055)
[»] scaffold0112 (1 HSPs)
scaffold0112 (237-293)||(2893-2949)
[»] scaffold0108 (1 HSPs)
scaffold0108 (235-307)||(6408-6480)
[»] scaffold0092 (1 HSPs)
scaffold0092 (185-307)||(38381-38503)
[»] scaffold1941 (1 HSPs)
scaffold1941 (240-275)||(160-195)
[»] scaffold0802 (1 HSPs)
scaffold0802 (240-275)||(4704-4739)
[»] scaffold0207 (1 HSPs)
scaffold0207 (240-275)||(13387-13422)
[»] scaffold0058 (4 HSPs)
scaffold0058 (566-621)||(60797-60851)
scaffold0058 (237-308)||(59648-59718)
scaffold0058 (412-478)||(39975-40041)
scaffold0058 (89-145)||(59511-59567)
[»] scaffold0488 (1 HSPs)
scaffold0488 (159-209)||(12580-12630)
[»] scaffold0298 (1 HSPs)
scaffold0298 (256-309)||(373-426)
[»] scaffold1102 (2 HSPs)
scaffold1102 (231-307)||(1937-2012)
scaffold1102 (126-208)||(1819-1899)
[»] scaffold0285 (1 HSPs)
scaffold0285 (235-275)||(19775-19815)
[»] scaffold0261 (1 HSPs)
scaffold0261 (109-153)||(6284-6328)
[»] scaffold0125 (3 HSPs)
scaffold0125 (573-621)||(24439-24486)
scaffold0125 (159-206)||(33612-33659)
scaffold0125 (573-621)||(360-407)
[»] scaffold0059 (1 HSPs)
scaffold0059 (235-275)||(49751-49791)
[»] scaffold0040 (2 HSPs)
scaffold0040 (240-292)||(106046-106098)
scaffold0040 (390-478)||(106303-106391)
[»] scaffold1434 (1 HSPs)
scaffold1434 (234-301)||(1348-1414)
[»] scaffold0628 (1 HSPs)
scaffold0628 (241-272)||(1054-1085)
[»] scaffold0334 (1 HSPs)
scaffold0334 (240-275)||(540-575)
[»] scaffold0241 (1 HSPs)
scaffold0241 (240-275)||(3204-3239)
[»] scaffold0113 (1 HSPs)
scaffold0113 (240-275)||(35512-35547)
[»] scaffold0100 (1 HSPs)
scaffold0100 (235-298)||(26624-26687)
[»] scaffold0077 (1 HSPs)
scaffold0077 (213-275)||(34361-34421)
[»] scaffold0071 (1 HSPs)
scaffold0071 (244-275)||(15294-15325)
[»] scaffold0037 (2 HSPs)
scaffold0037 (240-275)||(112961-112996)
scaffold0037 (244-275)||(117806-117837)
[»] scaffold1633 (1 HSPs)
scaffold1633 (245-275)||(1227-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (245-275)||(468-498)
[»] scaffold0956 (1 HSPs)
scaffold0956 (241-275)||(2577-2611)
[»] scaffold0601 (1 HSPs)
scaffold0601 (245-275)||(196-226)
[»] scaffold0230 (1 HSPs)
scaffold0230 (235-293)||(6675-6733)
[»] scaffold0151 (1 HSPs)
scaffold0151 (412-478)||(9918-9984)
[»] scaffold0064 (1 HSPs)
scaffold0064 (245-275)||(58768-58798)
[»] scaffold0036 (1 HSPs)
scaffold0036 (245-275)||(78185-78215)
[»] scaffold0032 (1 HSPs)
scaffold0032 (241-275)||(61844-61878)
[»] scaffold0023 (1 HSPs)
scaffold0023 (159-193)||(16649-16683)
[»] scaffold0019 (1 HSPs)
scaffold0019 (245-275)||(24131-24161)
[»] scaffold0001 (1 HSPs)
scaffold0001 (241-275)||(77709-77743)
[»] scaffold0716 (1 HSPs)
scaffold0716 (159-200)||(5590-5631)
[»] scaffold0546 (1 HSPs)
scaffold0546 (171-208)||(8021-8058)
[»] scaffold0109 (1 HSPs)
scaffold0109 (171-208)||(5249-5286)
[»] scaffold1276 (1 HSPs)
scaffold1276 (412-476)||(965-1029)
[»] scaffold0422 (1 HSPs)
scaffold0422 (412-476)||(3789-3853)


Alignment Details
Target: chr3 (Bit Score: 128; Significance: 7e-66; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 150 - 309
Target Start/End: Original strand, 12917211 - 12917370
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| | ||||||| |||||||| ||||||||||||||||||||     
T  12917211 aatacgtagaaactgcttttgggagaaaaagggaaaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaaga 12917310  T
Q  250 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12917311 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 12917370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 3527068 - 3527221
Alignment:
Q  156 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 255  Q
    ||||||||| ||| ||||||||||||||||||   ||| ||||||||| |||| | ||||||  |||||||| |||||||||||  ||||||||||||||    
T  3527068 tagaaactgtttttgggagaaaaagggagaaatgaagaagtcagagaatagaagaggagcaaacttgtagagtccgaattcaacttatctaaggtaaggg 3527167  T
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  3527168 tgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaaca 3527221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 137 - 309
Target Start/End: Complemental strand, 25202295 - 25202124
Alignment:
Q  137 aatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaatt 235  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| | ||||||| |||||||| |||||||    
T  25202295 aatagagagtcagaatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtccgaatt 25202196  T
Q  236 caaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||  ||||||||||||||||||||||| | ||| ||||||||||||| ||| | ||| ||| |||||||||||    
T  25202195 caataaatctaaggtaagggtgggactagc-ttcgctaataatgggtt-tataaatctgaaatagggtttaaca 25202124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 22841210 - 22841343
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  22841210 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaattcaaccaatctaatgtaagggtgggactagctttctctaa 22841308  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||| ||||| |||||||||||||||    
T  22841309 taatgggttgtataattctgaaaaagggtttaaca 22841343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 159 - 308
Target Start/End: Original strand, 14641463 - 14641611
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 257  Q
    ||||||| || |||||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  14641463 aaactgcatttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtg 14641560  T
Q  258 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  14641561 ggattagctttctctaataatgggttgtataattctaaaaaagggtttaac 14641611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 45803257 - 45803395
Alignment:
Q  170 gggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 268  Q
    |||||||||||| ||||||||||| ||||||||| ||||| | ||||||  || ||||| ||||||||||||||||||| || |||||||||||| ||||    
T  45803257 gggagaaaaagg-agaaagtgagaagtcagagaaagagaagaggagcaaactt-tagagtccgaattcaaccaatctaaagttagggtgggactagcttt 45803354  T
Q  269 ctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  45803355 ctctaataatgggttgtataattctgaaaaagggtttaaca 45803395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 309
Target Start/End: Original strand, 48043372 - 48043540
Alignment:
Q  140 agagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaa 238  Q
    |||||| || ||||||||||||||||||| ||||||||||| || ||||||||| ||||||| ||||||| | ||||||| |||||||  ||||||||||    
T  48043372 agagagtcagaatacgtagaaactgcttttgggagaaaaagagaaaaagtgagaagtcagagaaagagaagaggagcaagcttgtagaatccgaattcaa 48043471  T
Q  239 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
     ||||||||||||||||||  |||| | |||||||||||||| || ||| ||| | ||| |||||||||||    
T  48043472 tcaatctaaggtaagggtgtaactagc-ttctctaataatggatt-tataattttgaaatagggtttaaca 48043540  T

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Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 16979837 - 16979712
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||||||||||||||||||    
T  16979837 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggaatttgggttgatga 16979738  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  16979737 aattggggcttttggagtgaaaactg 16979712  T

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Target: chr3; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 150 - 308
Target Start/End: Complemental strand, 29907785 - 29907628
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 248  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29907785 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29907688  T
Q  249 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29907687 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29907628  T

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Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 150 - 308
Target Start/End: Complemental strand, 29948951 - 29948794
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 248  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29948951 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29948854  T
Q  249 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29948853 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29948794  T

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Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 150 - 308
Target Start/End: Complemental strand, 29998105 - 29997948
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 248  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29998105 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29998008  T
Q  249 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29998007 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29997948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 54875474 - 54875538
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 54875538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 24548867 - 24549016
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcc---cgaattcaaccaatcta 246  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  |         ||||| ||   |||  ||| | || |||    
T  24548867 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaagagaaagcg---------gtagaaccttgcga--tcatctaaccta 24548955  T
Q  247 aggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    | ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  24548956 aagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaa 24549016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 26054598 - 26054685
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  26054598 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactg 26054685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 14442237 - 14442163
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||    
T  14442237 tcaatcaatctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaaca 14442163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 413 - 499
Target Start/End: Complemental strand, 22652660 - 22652574
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaact 499  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  22652660 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaact 22652574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 2841501 - 2841570
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  2841501 caatctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaaca 2841570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 6156767 - 6156710
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 297  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6156767 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 6156710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 6159461 - 6159393
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  6159461 aatctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaaca 6159393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 14520503 - 14520435
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||    
T  14520503 caatctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaac 14520435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 150 - 275
Target Start/End: Original strand, 21845561 - 21845682
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||| | ||| ||  ||||| || || ||||    ||||||||||    
T  21845561 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagttagataagagaagaggagaaaacttgtaaagtccaaatt----caatctaagg 21845656  T
Q  250 taagggtgggactaactttctctaat 275  Q
    |||||||||||||||| |||| ||||    
T  21845657 taagggtgggactaaccttctttaat 21845682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 6805054 - 6805138
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 459  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||  ||||||||||||| |||||    
T  6805054 aagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttgg 6805138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 14152398 - 14152462
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  14152398 ctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaac 14152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 17208581 - 17208513
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||| ||||||    
T  17208581 caatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaac 17208513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 17669698 - 17669762
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  17669698 taaggtaatgatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 17669762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 17684835 - 17684899
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||    
T  17684835 taaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaaca 17684899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 15465983 - 15465896
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| | ||| |||||||||||||||||||| |||||| ||||||||||||    
T  15465983 gttcaggctgtagaataaacataggttgagtttcctatcaaatatgggatttgggttgatgaaattggggcttttagagtgaaaactg 15465896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 499
Target Start/End: Complemental strand, 5224211 - 5224126
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaact 499  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| | ||||||||||||||||    
T  5224211 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattgg-ggttttggagtgaaaact 5224126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 24547253 - 24547188
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  24547253 ctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaaca 24547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 378 - 450
Target Start/End: Original strand, 12917443 - 12917515
Alignment:
Q  378 agtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctat 450  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||| || || |||||||||||||| ||||    
T  12917443 agtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtaaaataatcataggtagagtttcctat 12917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 50755266 - 50755318
Alignment:
Q  257 gggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  50755266 gggactaactttctctaataatggattgtatgattctaaaaaggggtttaaca 50755318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 3160561 - 3160689
Alignment:
Q  180 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataat 278  Q
    |||||||||||||| |||||||||||||| | | | ||| |||||||   | ||||| ||||||||||||||||||||| ||||||| |||| |||| ||    
T  3160561 gggagaaagtgagaagtcagagaagagaagaagggaaagcttgtagaattctgaatttaaccaatctaaggtaagggtgagactaaccttctttaatcat 3160660  T
Q  279 gggttgtatgattctaaaaaagggtttaac 308  Q
    | | | ||| |||||||||| |||||||||    
T  3160661 gag-tatataattctaaaaatgggtttaac 3160689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 5215704 - 5215636
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||| |||||||||||||| |||| ||||||||||||||| ||||||| ||| | ||||||||||||||    
T  5215704 caatataaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaac 5215636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 12918472 - 12918526
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  12918472 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatgatg 12918526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 15566800 - 15566733
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||| |||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  15566800 aatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 15566733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 566 - 617
Target Start/End: Complemental strand, 25200914 - 25200864
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgat 617  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  25200914 agcaaaattaattgatgattt-gtagttggaattatgtgaagcattgttgat 25200864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 566 - 621
Target Start/End: Complemental strand, 48630282 - 48630228
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  48630282 agcaaaattaattgatgattt-gtagttgaaattatgtgaagcattgttgatgatg 48630228  T

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Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 16050980 - 16050915
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||| |||  ||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaaca 16050915  T

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Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 19568203 - 19568256
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  19568203 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 19568256  T

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Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 3528589 - 3528643
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| |||||| ||||||||||||| ||||||| |||||    
T  3528589 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgttgatg 3528643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 13185952 - 13185917
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  13185952 caatctaaggtaagggtgggactaactttctctaat 13185917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 40808053 - 40808018
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  40808053 caatctaaggtaagggtgggactaactttctctaat 40808018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 40812890 - 40812855
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  40812890 caatctaaggtaagggtgggactaactttctctaat 40812855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 44274475 - 44274440
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  44274475 caatctaaggtaagggtgggactaactttctctaat 44274440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 43549818 - 43549884
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||||||    
T  43549818 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatt 43549884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 55291764 - 55291830
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  |||||||||||||||||    
T  55291764 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatt 55291830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 2247877 - 2247930
Alignment:
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  2247877 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 2247930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 275
Target Start/End: Original strand, 5200240 - 5200273
Alignment:
Q  242 atctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||    
T  5200240 atctaaggtaagggtgggactaactttctctaat 5200273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 10559030 - 10558981
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    |||||||||| | |||||||||||||||||||||| || |||||||||||    
T  10559030 aaactgcttttgagagaaaaagggagaaagtgagaagtaagagaagagaa 10558981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 48631538 - 48631435
Alignment:
Q  112 taggtttataaaaagagaggttaggaatagagagacataatacg-------tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaag 204  Q
    ||||||||||| |||||||||||||| |||| || |||||||||       |||||||  ||||  ||||||||||||||||||||||| ||  ||||||    
T  48631538 taggtttataataagagaggttaggattagaaagtcataatacggaatacgtagaaacaacttttaggagaaaaagggagaaagtgagaagttggagaag 48631439  T
Q  205 agaa 208  Q
    ||||    
T  48631438 agaa 48631435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 6003248 - 6003181
Alignment:
Q  234 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 302  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||| ||||||||    
T  6003248 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctgaaaaaggg 6003181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 6468254 - 6468298
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 203  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||    
T  6468254 aaacggcttttgggagaaaaagggagaaagtgagaagtcagagaa 6468298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 10380075 - 10380031
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 203  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||    
T  10380075 aaactgtttttgggagaaaaagggagaaagtgagaagtcagagaa 10380031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 15026304 - 15026351
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  15026304 ttaattgatgattta-tagttggaattatgtgaagcattgttgatgatg 15026351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 10563765 - 10563730
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10563765 caatctaaggtaatggtgggactaactttctctaat 10563730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 15446867 - 15446898
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  15446867 ctaaggtaagggtgggactaactttctctaat 15446898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 33565144 - 33565109
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  33565144 caatctaaggtaagggtgtgactaactttctctaat 33565109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 35960923 - 35960958
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35960923 caatctaaggtaagggtgggattaactttctctaat 35960958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 450
Target Start/End: Original strand, 45803464 - 45803539
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctat 450  Q
    |||||||| ||||||||||||||||  ||| || || ||| |||||||||||| || ||||||| |||||| ||||    
T  45803464 aagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaacataggttgagtttcctat 45803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 9510906 - 9510964
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| ||||||||||||||||||  ||||||||||||||||  |  |||||||||||||    
T  9510906 tcaatcaatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattct 9510964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 9518881 - 9518939
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| ||||||||||||||||||  ||||||||||||||||  |  |||||||||||||    
T  9518881 tcaatcaatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattct 9518939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 11563781 - 11563747
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||| |||||||||    
T  11563781 aatctaaggtaagggtgggactaaccttctctaat 11563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 17045018 - 17044988
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaat 17044988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 17047178 - 17047148
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaat 17047148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 17518869 - 17518903
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||| |||||||||||||||||||||||||    
T  17518869 aatctaaggcaagggtgggactaactttctctaat 17518903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 17533731 - 17533765
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||| |||||||||||||||||||||||||    
T  17533731 aatctaaggcaagggtgggactaactttctctaat 17533765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 17541486 - 17541456
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaat 17541456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 22306583 - 22306613
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaat 22306613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 29907546 - 29907468
Alignment:
Q  390 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    ||||||||| |||| | | ||||||||  |||| |||| || |||||||||| ||| ||||||| ||||||||||||||    
T  29907546 gatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttggaatttgggt 29907468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 29948712 - 29948634
Alignment:
Q  390 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    ||||||||| |||| | | ||||||||  |||| |||| || |||||||||| ||| ||||||| ||||||||||||||    
T  29948712 gatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttggaatttgggt 29948634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 29997866 - 29997788
Alignment:
Q  390 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    ||||||||| |||| | | ||||||||  |||| |||| || |||||||||| ||| ||||||| ||||||||||||||    
T  29997866 gatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttggaatttgggt 29997788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 46823214 - 46823180
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgaga 193  Q
    |||||||||| ||||||||||||||||||||||||    
T  46823214 aaactgcttttgggagaaaaagggagaaagtgaga 46823180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 275
Target Start/End: Complemental strand, 48631391 - 48631353
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  48631391 aaccaatctaaggtaagggtgggactaaccttctttaat 48631353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 49900786 - 49900752
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||| ||||||||||    
T  49900786 aatctaaggtaagggtgggactaattttctctaat 49900752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 474
Target Start/End: Original strand, 50350981 - 50351043
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    ||||||||||||| || || |||||| |||||||||||| || ||||| |||||||| |||||    
T  50350981 tgttcaggttgtataataaacataggaagagttttctataaaatttgggatttgggtagatga 50351043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 24177735 - 24177784
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||| |||||    
T  24177735 ctaaggtaagggtgggacaaactttctctaattataagttgtataattct 24177784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 42417 - 42353
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  42417 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 42353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 6002059 - 6002012
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  6002059 ttaattgatgattt-gtagttggacttatgtgaagcattgttaatgatg 6002012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 13437128 - 13437072
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    |||||||||||||||| || ||||||| |||||| ||||||| |||||  |||||||    
T  13437128 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 13437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 13522475 - 13522559
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 459  Q
    |||||||| |||||| |||||||||  ||| || || |||||||||||||||| ||| ||||||   |||| ||||||| |||||    
T  13522475 aagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttgg 13522559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 273
Target Start/End: Original strand, 41172371 - 41172399
Alignment:
Q  245 taaggtaagggtgggactaactttctcta 273  Q
    |||||||||||||||||||||||||||||    
T  41172371 taaggtaagggtgggactaactttctcta 41172399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 1e-58; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 150 - 309
Target Start/End: Original strand, 22610172 - 22610331
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| | || |||| |||||| | |||||||||||||||||||||    
T  22610172 aatacgtagaaaccgcttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggaacaagcttgtagggtccgaattcaaccaatctaagg 22610271  T
Q  250 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  22610272 taagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaaca 22610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 20879619 - 20879463
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| |||||||||||||||||||||    
T  20879619 aatacgtagaaactacttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaaacttgtagagtccgaattcaaccaatctaagg 20879520  T
Q  250 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    |||||||||||||||| |||| |||| ||  | | |||| ||||||||||||||||||    
T  20879519 taagggtgggactaaccttctttaatcataag-tatatggttctaaaaaagggtttaa 20879463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 156 - 309
Target Start/End: Complemental strand, 23884309 - 23884159
Alignment:
Q  156 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 255  Q
    ||||||||||||| ||||||||| |||||||||||| | |||||||||||||| | ||||||  |||||||| | ||||||| | |||||||||||||||    
T  23884309 tagaaactgcttttgggagaaaa-gggagaaagtgaaaagtcagagaagagaagaggagcaaacttgtagagtctgaattcatctaatctaaggtaaggg 23884211  T
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
     ||||||| |||||||||  ||||||||||||||||||||||| ||||||||||    
T  23884210 cgggactagctttctcta--aatgggttgtatgattctaaaaaggggtttaaca 23884159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 22484058 - 22483926
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  22484058 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaattcaaccaatctaaggtaagcg-gggactaactttctctaa 22483961  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||| ||||||| ||||| |||||||||||||||    
T  22483960 taatgagttgtataattcttaaaaagggtttaaca 22483926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 22345286 - 22345152
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  22345286 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 22345187  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||  |||| ||||||||||    
T  22345186 taatgggttgtatgattccgaaaaggggtttaaca 22345152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 22356946 - 22356812
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  22356946 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 22356847  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||  |||| ||||||||||    
T  22356846 taatgggttgtatgattccgaaaaggggtttaaca 22356812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 22208405 - 22208258
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 257  Q
    |||||||||| ||||||||| |||||||||||||| |||| |||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  22208405 aaactgcttttgggagaaaa-gggagaaagtgagaagtcaaagaaagagaagaggagcaatctggtagagaccga--tcatctaatctaaggtaagggtg 22208309  T
Q  258 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  22208308 ggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22208258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 21399774 - 21399705
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21399774 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 21399705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 21794267 - 21794198
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21794267 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 21794198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 16198761 - 16198636
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  16198761 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 16198662  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  16198661 aattggggcttttggagtgaaaactg 16198636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 375 - 497
Target Start/End: Original strand, 25657641 - 25657763
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || || |||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  25657641 aagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 25657740  T
Q  475 aattggtgcttttggagtgaaaa 497  Q
    |||||| |||||| |||||||||    
T  25657741 aattggggcttttagagtgaaaa 25657763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 93 - 307
Target Start/End: Complemental strand, 36306212 - 36305988
Alignment:
Q  93 ggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgag 192  Q
    |||||||  |||||||||||||||||||||||||| ||||||| ||   | | | |||||||||  ||||| |||| |||||||||||||||||||||||    
T  36306212 ggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcaaa-agataatacgtgcaaacttcttttgggagaaaaagggagaaagtgag 36306114  T
Q  193 aggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 278  Q
    | |||||||||||||| |||             ||||||  |||||||| ||||  ||| | ||||||||||||||||| ||||| |||||||||||||     
T  36306113 aagtcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccga--tcatctaatctaaggtaagggtgagactagctttctctaataa- 36306017  T
Q  279 gggttgtatgattctaaaaaagggtttaa 307  Q
     |||||||||||||| ||||||| |||||    
T  36306016 cggttgtatgattctgaaaaaggttttaa 36305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 36732246 - 36732353
Alignment:
Q  79 tgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 178  Q
    ||||| ||||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||  |||| | ||| ||||| |||    
T  36732246 tgaggggcaaatttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgtgaaaacagtttttgggag-aaa 36732344  T
Q  179 agggagaaa 187  Q
    |||||||||    
T  36732345 agggagaaa 36732353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 14397074 - 14397160
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  14397074 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgga-tttgggttgatgaaattggggcttttggagtgaaaactg 14397160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 479
Target Start/End: Original strand, 12037291 - 12037395
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||||||||||||| | |||||| ||||||| ||||||||||| || |||||||||||  | ||||||| ||||| ||||||||||  ||    
T  12037291 aagagtagataatccgatgaattaggttaataattggtgtttaggttgtagaataatcataggtagagactcctatcaaatttgggatttgggttggaga 12037390  T
Q  475 aattg 479  Q
    |||||    
T  12037391 aattg 12037395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 18816290 - 18816358
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||    
T  18816290 caatataaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaac 18816358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 22483834 - 22483774
Alignment:
Q  249 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaca 22483774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 497
Target Start/End: Complemental strand, 23479007 - 23478885
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||| | ||||||||||||||    
T  23479007 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttaggatttgggttgatga 23478908  T
Q  475 aattggtgcttttggagtgaaaa 497  Q
    |||||| ||||| ||||||||||    
T  23478907 aattggggctttaggagtgaaaa 23478885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 36404982 - 36405047
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  36404982 ttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgt 36405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 18834474 - 18834422
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 297  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18834474 taaggtaagggtgggactagctttctctaataatggattgtatgattctaaaa 18834422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 36732411 - 36732475
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||| |||||||    
T  36732411 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaac 36732475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 21514743 - 21514680
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||  |||||||||||||| ||||||| ||||| ||||||||||||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaac 21514680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 22258306 - 22258369
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||| |||| |||||||||||||||    
T  22258306 taaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaac 22258369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 22474962 - 22474897
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    |||||||||  |||||| ||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  22474962 ttggaataagggagaatatgttaagtttataaaaagagaggttaggaatagagaaacagaatacgt 22474897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 4380616 - 4380680
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 4380680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 12577932 - 12577869
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||  ||||||||||||||    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaaaagggtttaac 12577869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 4380463 - 4380550
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 178  Q
    |||||||||  |||||| ||||||||||||||||||||||||||| |||||||| ||| |||| ||  |||| | ||| |||||||||    
T  4380463 ttggaataagggagaatatgttaggtttataaaaagagaggttagtaatagagaaacagaataggtgaaaacagtttttgggagaaaa 4380550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 22532122 - 22532180
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  22532122 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 22532180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 22536807 - 22536865
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  22536807 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 22536865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 19880710 - 19880630
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| |||||||       |||||||||||||||||||| |||||||||||||||||||    
T  19880710 gttcaggctgtagaataaacataggttgagtttcctatcaa-------atttgggttgatgaaattggggcttttggagtgaaaactg 19880630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 17978263 - 17978327
Alignment:
Q  92 tggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    ||||||||  |||||| ||||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  17978263 tggaataagggagaatatgttaggtttatataaagagagcttaggaatagagaaacagaatacgt 17978327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 20397500 - 20397540
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  20397500 tcaaccaatctaaggtaagggtgggattaactttctctaat 20397540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 22708313 - 22708380
Alignment:
Q  234 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 302  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||||||||||||    
T  22708313 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctaaaaaaggg 22708380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 21678838 - 21678907
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21678838 aaccaatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21678907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 621
Target Start/End: Complemental strand, 23885448 - 23885394
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  23885448 agcaaaattaattgatgattt-gtagtgggaattatgtgaagtattgttgatgatg 23885394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 20022036 - 20022070
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||||||    
T  20022036 aatctaaggtaagggtgggactaactttctctaat 20022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 17611210 - 17611259
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    |||||||||| |||||||||||||| ||||||||| || |||||||||||    
T  17611210 aaactgcttttgggagaaaaagggaaaaagtgagaagtaagagaagagaa 17611259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 17906848 - 17906897
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  17906848 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 17906897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 18023567 - 18023620
Alignment:
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  18023567 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 18023620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 21676494 - 21676561
Alignment:
Q  239 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21676494 ccaatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 26454593 - 26454517
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaa 496  Q
    ||||||| ||||||| || ||||||| |||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  26454593 gttcaggctgtagaataaacataggttgagtttcctatcaa-------atttgggttgatgaaattggggcttttggagtgaaa 26454517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 38184923 - 38184976
Alignment:
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  38184923 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 38184976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 22310686 - 22310733
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||    
T  22310686 ttaattgatgattt-gtatttggaattatgtgaagcattgttgatgatg 22310733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 5761586 - 5761555
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaat 5761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 6101748 - 6101783
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6101748 caatctaaggtaaaggtgggactaactttctctaat 6101783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 17158962 - 17158993
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  17158962 ctaaggtaagggtgggactaactttctctaat 17158993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 19880875 - 19880844
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  19880875 ctaaggtaagggtgggactaactttctctaat 19880844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 450
Target Start/End: Complemental strand, 22483705 - 22483630
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctat 450  Q
    |||||||| ||||| ||||||||||  ||| || || |||||||||||||||| || ||||||| |||||| ||||    
T  22483705 aagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaacataggttgagtttcctat 22483630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 23479135 - 23479104
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  23479135 ctaaggtaagggtgggactaactttctctaat 23479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 617
Target Start/End: Complemental strand, 23882827 - 23882777
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgat 617  Q
    ||||||||||||||||||||| |||||  ||||||||||||| |||||||||    
T  23882827 agcaaaattaattgatgattt-gtagtgggaattatgtgaagtattgttgat 23882777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 23899982 - 23900017
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  23899982 caatctaaggtaagggtgtgactaactttctctaat 23900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 26454761 - 26454730
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  26454761 ctaaggtaagggtgggactaactttctctaat 26454730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 31722488 - 31722523
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||| ||||||||||||||||||||||||||    
T  31722488 caatctaagataagggtgggactaactttctctaat 31722523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 36727033 - 36727068
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  36727033 caatctaaggtaagggtgagactaactttctctaat 36727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 45469214 - 45469249
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  45469214 caatctaaggtaagggtgagactaactttctctaat 45469249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 275
Target Start/End: Original strand, 20517028 - 20517066
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  20517028 aaccaatctaaggtaagggtgggactaaccttctttaat 20517066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 21676590 - 21676654
Alignment:
Q  242 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21676590 atctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21676654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 8413911 - 8413975
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  8413911 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 8413975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 18834573 - 18834541
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtga 191  Q
    |||||||||| ||||||||||||||||||||||    
T  18834573 aaactgcttttgggagaaaaagggagaaagtga 18834541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 19882837 - 19882773
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  19882837 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 19882773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 22317901 - 22317941
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||| |||||||||||||||||||||||||| ||| |||||    
T  22317901 tcaatcaatctaaggtaagggtgggactaaccttcactaat 22317941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 589 - 621
Target Start/End: Complemental strand, 22343849 - 22343817
Alignment:
Q  589 tagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||| |||||||||||||||||||||||||||    
T  22343849 tagttggaattatgtgaagcattgttgatgatg 22343817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 589 - 621
Target Start/End: Complemental strand, 22355509 - 22355477
Alignment:
Q  589 tagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||| |||||||||||||||||||||||||||    
T  22355509 tagttggaattatgtgaagcattgttgatgatg 22355477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 22474818 - 22474778
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  22474818 tcaatcaatctaaggtaagggtgggactaaccttctttaat 22474778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 36405122 - 36405162
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||| |||||||||||||||||| |||||||||||| ||||    
T  36405122 tcaatcaatctaaggtaagggtgtgactaactttctttaat 36405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 3e-56; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 150 - 309
Target Start/End: Complemental strand, 34392915 - 34392756
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    |||||||||||||| |||| |||||||||| ||||||||||||| |||||||||||||| ||||||||  |||||||| || ||||||||||||||||||    
T  34392915 aatacgtagaaactccttttgggagaaaaaaggagaaagtgagaagtcagagaagagaatatgagcaatcttgtagagtccaaattcaaccaatctaagg 34392816  T
Q  250 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  34392815 taagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 34392756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 17901929 - 17902055
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  17901929 aagagtagataatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatga 17902028  T
Q  475 aattggtgc-ttttggagtgaaaactg 500  Q
    |||||| || |||||||||||||||||    
T  17902029 aattggggctttttggagtgaaaactg 17902055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 390 - 498
Target Start/End: Complemental strand, 6834076 - 6833968
Alignment:
Q  390 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttgg 489  Q
    |||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||||     
T  6834076 gatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggattttggttgatgaaattggggcttttgt 6833977  T
Q  490 agtgaaaac 498  Q
    |||||||||    
T  6833976 agtgaaaac 6833968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 159 - 309
Target Start/End: Complemental strand, 8306743 - 8306594
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 257  Q
    |||||||||| | |||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||| |||    
T  8306743 aaactgcttttgagagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagagtg 8306646  T
Q  258 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  8306645 ggactagctttctctaataatgggttgtataattctaaaaaggggtttaaca 8306594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 17901719 - 17901858
Alignment:
Q  170 gggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 268  Q
    |||||||||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||| | ||| | | ||||||||||||||| ||||| ||||    
T  17901719 gggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgagactagcttt 17901817  T
Q  269 ctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  17901818 ctctaataatgggttgtataattctgaaaaagggtttaaca 17901858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 375 - 476
Target Start/End: Original strand, 21239170 - 21239271
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||| ||||||||||| |||||||||| |||||||| || |||||||||||||||||||||| ||| | ||||||||||||||    
T  21239170 aagagtaggtaatccgatgaactaaggtaataattggtgttcagtttgtagaataatcataggtagagttttctatcaaatttaggatttgggttgatga 21239269  T
Q  475 aa 476  Q
    ||    
T  21239270 aa 21239271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 46197872 - 46197997
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||| |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  46197872 aagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 46197971  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  46197972 aattggggcttttggagtgaaaactg 46197997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 150 - 309
Target Start/End: Complemental strand, 35895246 - 35895087
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 248  Q
    |||||||  |||||| ||| ||||||||| ||||||||| |||| ||||||||| ||||| | ||||||| ||||||||   ||| ||| | ||||||||    
T  35895246 aatacgtgaaaactgtttttgggagaaaa-gggagaaagagagaagtcagagaaagagaagaggagcaagcttgtagagtttgaaatcatctaatctaag 35895148  T
Q  249 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||| |||| |||||| |||| |||||||||||||||||||||||| ||||||| |||||||    
T  35895147 gtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaaca 35895087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 39061437 - 39061310
Alignment:
Q  180 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatg 279  Q
    |||||||||||||| |||||||||||||| ||||||||  |||||||| | |||||||||| |||||||||||| ||||||||||| |||| |||| |||    
T  39061437 gggagaaagtgagaagtcagagaagagaagatgagcaaacttgtagagtctgaattcaacctatctaaggtaagagtgggactaaccttctgtaatcatg 39061338  T
Q  280 ggttgtatgattctaaaaaagggtttaac 308  Q
     | | ||| ||||| ||||| ||||||||    
T  39061337 ag-tatataattctgaaaaaaggtttaac 39061310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 375 - 478
Target Start/End: Complemental strand, 8306529 - 8306426
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||| ||| || |||||||  ||||| ||||||| ||||| |||||||| |||||    
T  8306529 aagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatga 8306430  T
Q  475 aatt 478  Q
    ||||    
T  8306429 aatt 8306426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 28476579 - 28476797
Alignment:
Q  103 agaatgtgttaggtttataaaaagagaggttaggaa-tagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag 201  Q
    ||||||||||||||||||||||||| ||||||| || | |  | | | |||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  28476579 agaatgtgttaggtttataaaaagaaaggttagaaagtcggaatagagaatatgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagag 28476678  T
Q  202 aag--------------agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtat 287  Q
    |||              |||| | ||||||  ||| |||| |||   ||| | |||||||||||||||||||||||  |||||||||||||| |||||||    
T  28476679 aagggaagaatcttgtgagaagaggagcaatcttgcagagtccgg--tcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtat 28476776  T
Q  288 gattctaaaaaagggtttaac 308  Q
     ||||| ||||||||||||||    
T  28476777 aattctgaaaaagggtttaac 28476797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 45499598 - 45499530
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  45499598 aatctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaaca 45499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 50544929 - 50544861
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  50544929 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 50544861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 478
Target Start/End: Original strand, 7052140 - 7052243
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||| || || |||||||  ||||| ||||||  ||||| |||||||| |||||    
T  7052140 aagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatttgggtagatga 7052239  T
Q  475 aatt 478  Q
    ||||    
T  7052240 aatt 7052243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 22145666 - 22145729
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaac 22145729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 38056668 - 38056735
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||    
T  38056668 aatctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaac 38056735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 20588696 - 20588624
Alignment:
Q  239 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaa--aaaagggtttaaca 309  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||||||    
T  20588696 ccaatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaaca 20588624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 20593234 - 20593162
Alignment:
Q  239 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaa--aaaagggtttaaca 309  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||||||    
T  20593234 ccaatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaaca 20593162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 50001401 - 50001276
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || |||| || |||||| ||||||| ||| | ||||||||||||||    
T  50001401 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatatgttgagtttcctatcaaattttggatttgggttgatga 50001302  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  50001301 aattggggcttttggagtgaaaactg 50001276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 390 - 478
Target Start/End: Original strand, 24723602 - 24723690
Alignment:
Q  390 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||  ||||| ||||||| ||||| ||||||||  ||||||||    
T  24723602 gatgaattaaggtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtaaatgaaatt 24723690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 635001 - 635064
Alignment:
Q  242 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 305  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||    
T  635001 atctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 307
Target Start/End: Complemental strand, 12711101 - 12710857
Alignment:
Q  77 gctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaa-ctgctttcgggag 174  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||||| ||||||| ||   | |  | | |||||||||||| ||||||| |||||    
T  12711101 gctgaggggcagaataggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcataatagagaatacgtagaaaactgctttagggag 12711002  T
Q  175 aaaaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtggga 260  Q
    ||||| || |||||||||| |||||||||||||| |||             ||||||  |||||||| || |  ||| | |||||||||||| | |||||    
T  12711001 aaaaatggtgaaagtgagaagtcagagaagagaagaatcttatgagaagaggagcaatcttgtagagtccca--tcatctaatctaaggtaaagatggga 12710904  T
Q  261 ctaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    ||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  12710903 ctagctttctctaatattgggttgtataattctgaaaaagggtttaa 12710857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 6834297 - 6834164
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| ||| ||||| ||||| | ||||||| || ||||| ||| | ||| | | ||||||| |||||||  |||| ||||||||||    
T  6834297 aaaagggagaaagtgagaagtcggagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggcaagggtgatactagctttctctaa 6834199  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||| ||||||| ||||| |||||||||||||||    
T  6834198 taatgagttgtataattctgaaaaagggtttaaca 6834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 21187968 - 21188054
Alignment:
Q  180 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtag-agcccgaattcaaccaatctaaggtaagggtgggactaac 265  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||| |  | ||||| |||||||||||||||||||||||||||||    
T  21187968 gggagaaagtgagaagtcagagaagagaagaagagaaagtttgtagaattcagaatttaaccaatctaaggtaagggtgggactaac 21188054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 421 - 500
Target Start/End: Original strand, 29763805 - 29763884
Alignment:
Q  421 tgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| || |||| || |||||| ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  29763805 tgtagaataaacataagttgagtttcctatcaaatttgggatttgggtggatgaaattggggcttttggagtgaaaactg 29763884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 375 - 444
Target Start/End: Original strand, 21243864 - 21243933
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagtt 444  Q
    |||||||| ||||||||||||||| | |||||| ||||||||||||||||||| || |||||| ||||||    
T  21243864 aagagtagataatccgatgaattaggttaataattggtgttcaggttgtagaataatcataggcagagtt 21243933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 24719357 - 24719422
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    |||||||||  || ||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  24719357 ttggaataagggataatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgt 24719422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 44892659 - 44892594
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    |||||||||  |||||| |||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  44892659 ttggaataagggagaatatgttaggtttataaaaggagaggttaggaatagagaaacatgatacgt 44892594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 7703184 - 7703140
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatg 279  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  7703184 tcaaccaatctaaggtaagggtgggactagctttctctaataatg 7703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 24719514 - 24719573
Alignment:
Q  248 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  24719514 ggtaagggtgg-actagctttctctaataatgggttgtataattctgaaaaagggtttaac 24719573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 14792403 - 14792474
Alignment:
Q  85 gcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    ||||| ||| |||||  |||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  14792403 gcaaatttgaaataagggagaatatgttaggtttataaaaagagaggttatgaatagagaaacagaatacgt 14792474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 21168995 - 21168933
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 297  Q
    |||||||||||||||||||||||| | ||||||||||||||  | |||||||| |||||||||    
T  21168995 tcaaccaatctaaggtaagggtggaattaactttctctaattttaggttgtataattctaaaa 21168933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 24723341 - 24723399
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  24723341 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 24723399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 566 - 620
Target Start/End: Complemental strand, 34391829 - 34391776
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgat 620  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  34391829 agcaaaattaattgatgattt-gtagttggaaatatgtgaagcattgttgatgat 34391776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 7051917 - 7051970
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  7051917 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 7051970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 51336532 - 51336467
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 51336467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 8275988 - 8276052
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||| ||||| |||| |||||||||| || |||| ||||| ||||||||||||||    
T  8275988 ctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaac 8276052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 16401963 - 16401901
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||| |||||||||||    
T  16401963 taaggtaagggtgggactaac-ttctctaataatgggtt-tataattctgaaatagggtttaaca 16401901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 449
Target Start/End: Original strand, 22145798 - 22145870
Alignment:
Q  377 gagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttcta 449  Q
    |||||| |||||| ||||||||| ||||||| || |||||| ||||||||  || ||||||||||||||||||    
T  22145798 gagtaggtaatccaatgaattaaagtaataattgatgttcaagttgtagattaatcataggtagagttttcta 22145870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 23194675 - 23194741
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||| ||||||| |||||||||    
T  23194675 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggagtttgggtagatgaaatt 23194741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 35894064 - 35894010
Alignment:
Q  446 tctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||| || ||||| |||||||||||||||||||  |||||||||||||||||||    
T  35894064 tctataaaatttgggatttgggttgatgaaattgaggcttttggagtgaaaactg 35894010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 450
Target Start/End: Complemental strand, 35895015 - 35894949
Alignment:
Q  384 taatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctat 450  Q
    |||||||||||| ||||||||||| |||||||||||| || ||| || |||| | ||||||||||||    
T  35895015 taatccgatgaagtaaggtaataattggtgttcaggtggtggaataatcatatgaagagttttctat 35894949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 12327742 - 12327807
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||| |||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 12327807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 18121794 - 18121741
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagaga 144  Q
    |||||||||  |||||| |||||| |||||||||||||||||||||||| ||||    
T  18121794 ttggaataagggagaatatgttagatttataaaaagagaggttaggaattgaga 18121741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 21239044 - 21239097
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||||||||||| |||||||||||||||||||||||  |  |||||||||||||    
T  21239044 caatctaaggtatgggtgggactaactttctctaattctaagttgtatgattct 21239097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 297245 - 297181
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  297245 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 297181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 20846338 - 20846382
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 203  Q
    |||||||||| |||||||||||||| ||||||||| |||||||||    
T  20846338 aaactgcttttgggagaaaaagggaaaaagtgagaagtcagagaa 20846382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 21187889 - 21187945
Alignment:
Q  89 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag 145  Q
    |||||||||||  |||||||||||||||| | || | ||||||||||||||||||||    
T  21187889 aattggaataagggagaatgtgttaggttaagaataggagaggttaggaatagagag 21187945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 24007224 - 24007287
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||| |||||||| ||||| | |||||| ||||| ||||| ||||||||    
T  24007224 ctaaggtaagggtgggactagctttctctgataat-gattgtataattctgaaaaaaggtttaac 24007287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 28193561 - 28193605
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 203  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||    
T  28193561 aaactgcttttgggagaaaaagtgagaaagtgagaagtcagagaa 28193605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 4595848 - 4595883
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  4595848 caatctaaggtaagggtgagactaactttctctaat 4595883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 13302959 - 13302924
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  13302959 caatctaaggtaagggtgagactaactttctctaat 13302924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 29763631 - 29763662
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  29763631 ctaaggtaagggtgggactaactttctctaat 29763662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 42913106 - 42913071
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  42913106 caatctaaggtaagggtgagactaactttctctaat 42913071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 46197744 - 46197775
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  46197744 ctaaggtaagggtgggactaactttctctaat 46197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 7320584 - 7320614
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaac 265  Q
    |||||||||||||||||||||||||||||||    
T  7320584 tcaaccaatctaaggtaagggtgggactaac 7320614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 16058310 - 16058344
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||| ||||||||||    
T  16058310 aatctaaggtaagggtgggactaaatttctctaat 16058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 19676763 - 19676733
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaat 19676733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 20708048 - 20708121
Alignment:
Q  234 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||| ||||||||||||||||||||||||||| |||| |||  ||| ||| ||| ||||| |||||||| |||||    
T  20708048 ttcatccaatctaaggtaagggtgggactaaccttctttaa-catgagttctataattctgaaaaaggggttaac 20708121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 21046049 - 21046079
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaat 21046079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 22130188 - 22130254
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||| ||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||||||    
T  22130188 tgttaaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatt 22130254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 38056589 - 38056623
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgaga 193  Q
    |||||||||| ||||||||||||||||||||||||    
T  38056589 aaactgcttttgggagaaaaagggagaaagtgaga 38056623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 51324566 - 51324508
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| |||||||||||||||||| ||||||||||| |||||  |  |||||||||||||    
T  51324566 tcaatcaatctaaggtaagggtgagactaactttccctaattctaagttgtatgattct 51324508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 14237582 - 14237619
Alignment:
Q  171 ggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    ||||||||||||||||||||||| || |||||||||||    
T  14237582 ggagaaaaagggagaaagtgagaagtaagagaagagaa 14237619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 500
Target Start/End: Original strand, 21188164 - 21188284
Alignment:
Q  379 gtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||| |||||| |||||||||  ||| || || |||||||||||||||| ||  ||| |||  |||| ||||||| ||||| |||||||| | || ||||    
T  21188164 gtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatttgggtagttgtaatt 21188263  T
Q  479 ggtgcttttggagtgaaaactg 500  Q
    || | |||||| ||||||||||    
T  21188264 ggggtttttgg-gtgaaaactg 21188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 21243688 - 21243788
Alignment:
Q  176 aaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaa-ggtaagggtgggactaactttctcta 273  Q
    |||||||||||||||||| ||||||| ||||||| | ||||||| || ||||| ||| | ||| | ||||||| |||||||||| ||||||| |||| ||    
T  21243688 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctaatctaagggtaagggtgagactaaccttcttta 21243786  T
Q  274 at 275  Q
    ||    
T  21243787 at 21243788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 46560203 - 46560166
Alignment:
Q  171 ggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    ||||||||||||||||||||||| || |||||||||||    
T  46560203 ggagaaaaagggagaaagtgagaagtaagagaagagaa 46560166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 6833018 - 6832971
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||  ||||| |||||||||||| ||||||||||||||    
T  6833018 ttaattgatgattta-tagttggaattatgtgaaccattgttgatgatg 6832971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 12709537 - 12709490
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||  || || |||||||||||||||||||||||||||    
T  12709537 ttaattgatgattta-taattggaattatgtgaagcattgttgatgatg 12709490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 20709262 - 20709309
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  20709262 ttaattgatgattt-gtagttggacttatgtgaagcattgttaatgatg 20709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 617
Target Start/End: Original strand, 21190538 - 21190581
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgat 617  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||    
T  21190538 ttaattgatgattt-gtagttggaattatgtgaagcattattgat 21190581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 3e-53; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 137 - 307
Target Start/End: Complemental strand, 38299908 - 38299738
Alignment:
Q  137 aatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattc 236  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||| | ||| ||    
T  38299908 aatagagagccataatacgtagaaacgacttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtctgaaatc 38299809  T
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    | | ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  38299808 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 137 - 309
Target Start/End: Original strand, 36300533 - 36300705
Alignment:
Q  137 aatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattc 236  Q
    |||||||| ||||||||||||||||||||||| ||  || |||| |||||||||||| |||||||||||||| | ||||||  |||||||  ||||||||    
T  36300533 aatagagatacataatacgtagaaactgcttttggtggagaaagtgagaaagtgagaagtcagagaagagaagaggagcaaacttgtagaatccgaattc 36300632  T
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    || ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  36300633 aatcaatctaaggtaaaggtgagactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 36300705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 375 - 497
Target Start/End: Complemental strand, 19282971 - 19282849
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||| ||||||||||| |||| |||||||||||||| || |||||||||||||||||||||| |||||||||||| |||||||    
T  19282971 aagagtaggtaatccgatgaactaaggtaataattggtcttcaggttgtagaataatcataggtagagttttctatcaaatttggaatttggattgatga 19282872  T
Q  475 aattggtgcttttggagtgaaaa 497  Q
    |||||| ||||||||||||||||    
T  19282871 aattggggcttttggagtgaaaa 19282849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 13315208 - 13315333
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||| || ||||||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  13315208 aagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatga 13315307  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| | |||||||||||||||||    
T  13315308 aattggggtttttggagtgaaaactg 13315333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 13315012 - 13315146
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||| ||||| ||||||||| ||||| | ||||||| |||||||| | ||| | | | ||||||||||||||||| ||||| ||||||||||    
T  13315012 aaaagggagaaaatgagaagtcagagaaagagaataggagcaagcttgtagagtctgaaataatctaatctaaggtaagggtgagactatctttctctaa 13315111  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||| |||| ||||||||||    
T  13315112 taatgggttgtatgattctgaaaaggggtttaaca 13315146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 13744440 - 13744574
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||| ||||| || |||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  13744440 aaaagggagaaattgagaagttagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 13744539  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||| |||||||||||||| ||||||||||    
T  13744540 taatgggttttatgattctaaaaaggggtttaaca 13744574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 18570768 - 18570635
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    ||||||| |||||||||| || |||||| ||||| | | ||||| || ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  18570768 aaaagggggaaagtgagaagttagagaaagagaagaggggcaagctt-tagagtccgaattcaaccaatctaaggtaagggtgagactagctttctctaa 18570670  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||| ||||||| ||| ||||||||||    
T  18570669 taatgggttgtaagattctagaaaggggtttaaca 18570635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 375 - 478
Target Start/End: Original strand, 47975018 - 47975121
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||||||||| || ||||| |  ||||||||||||| |||||||||||||| |||||    
T  47975018 aagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatttgggtagatga 47975117  T
Q  475 aatt 478  Q
    ||||    
T  47975118 aatt 47975121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 15700666 - 15700799
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| || ||||||||||| | ||||||| |||||||| | | | |||   |||||||||||||| ||  |||| |||||||||||    
T  15700666 aaaagggagaaagtgagaagttagagaagagaagaggagcaagattgtagagtcagtaatcatataatctaaggtaaggatgatactagctttctctaat 15700765  T
Q  276 aatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||| ||||||||| ||||||||||    
T  15700766 aatgggttgtatggttctaaaaaggggtttaaca 15700799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 58409 - 58477
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  58409 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 58477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 8488093 - 8488157
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 8513752 - 8513816
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8513752 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8513816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 33556097 - 33556169
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  33556097 aaccaatctaagataagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 33556169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 8930700 - 8930829
Alignment:
Q  180 gggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 278  Q
    |||||||||||||| |||| |||| ||||| | ||||||| || ||| | ||| | ||| | |||||||||||||||||||||||  |||||||||||||    
T  8930700 gggagaaagtgagaagtcaaagaaagagaagaggagcaagctt-tagcgtccggaatcatctaatctaaggtaagggtgggactacatttctctaataat 8930798  T
Q  279 gggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||| ||||||||||    
T  8930799 gggttgtatgattctaaaaaggggtttaaca 8930829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 375 - 478
Target Start/End: Original strand, 12754792 - 12754895
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||| |||||||||| ||||||| ||||||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||    
T  12754792 aagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatga 12754891  T
Q  475 aatt 478  Q
    ||||    
T  12754892 aatt 12754895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 16550129 - 16550254
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||||||||||| ||||| ||||||||||||||    
T  16550129 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatga 16550228  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||  ||||||||    
T  16550229 aattggggcttttggaaagaaaactg 16550254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 16615533 - 16615408
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||||||||||| ||||| ||||||||||||||    
T  16615533 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatga 16615434  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||  ||||||||    
T  16615433 aattggggcttttggaaagaaaactg 16615408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 32160327 - 32160452
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||| |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||  |||||| |||||||    
T  32160327 aagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttggattgatga 32160426  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  32160427 aattggggcttttggagtgaaaactg 32160452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 708424 - 708492
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  708424 caatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 708492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 12127080 - 12127193
Alignment:
Q  161 actgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtggg 259  Q
    |||||||| |||||||||||| ||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||||    
T  12127080 actgcttttgggagaaaaaggaagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtggg 12127177  T
Q  260 actaactttctctaat 275  Q
    ||||||||||||||||    
T  12127178 actaactttctctaat 12127193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 15575644 - 15575712
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  15575644 caatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 15575712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 1856564 - 1856651
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||    
T  1856564 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtaaaaactg 1856651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 13917736 - 13917823
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||    
T  13917736 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatctgggttgatgaaattggggcttttggagtgaaaactg 13917823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 16250219 - 16250286
Alignment:
Q  242 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||||||||||||||    
T  16250219 atctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaaca 16250286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 15720841 - 15720767
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||| |||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  15720841 tcaatcaatttaaggtaaaggtgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaaca 15720767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 20252177 - 20252246
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  20252177 caatctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaaca 20252246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 38295527 - 38295434
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||| ||||||| || |||||||||||||| ||||  | ||||| ||||||||    
T  38295527 aagagtaggtaatccgatgaagtaaggtaataattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttgggatttgggt 38295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 47095514 - 47095441
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||    
T  47095514 tcaatcaatctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaac 47095441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 43276744 - 43276797
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 298  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  43276744 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaa 43276797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 25943319 - 25943255
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || | |||| ||||||||||    
T  25943319 taaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaaca 25943255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 43745709 - 43745645
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||| | ||||||||||||||    
T  43745709 ctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaac 43745645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 18874660 - 18874719
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 299  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||    
T  18874660 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaa 18874719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 19195667 - 19195601
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||  |||||||||||||    
T  19195667 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattct-gaaaagggtttaac 19195601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 25926463 - 25926550
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || |||||||  ||||| |||| || ||||| |||||||||||||||||||| || ||||||||||||||||    
T  25926463 gttcaggctgtagaataaacataggttcagtttcctataaaatttgggatttgggttgatgaaattggggcatttggagtgaaaactg 25926550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 36301872 - 36301926
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  36301872 agcaaaattaattgatgattt-gtagttagaattatgtgaagtattgttgatgatg 36301926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 4690510 - 4690575
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 157  Q
    |||||||||  |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4690510 ttggaataagggagaatatgttaggtttataaaa-gagaggttaggaatagagaaacataatacgta 4690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 19283108 - 19283051
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 302  Q
    ||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||    
T  19283108 taaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaaggg 19283051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 43745862 - 43745797
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    |||||||||  || ||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  43745862 ttggaataagggataatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgt 43745797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 48212584 - 48212668
Alignment:
Q  102 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 187  Q
    |||||| ||||||||||||||||||||||||||| |||||||| ||| |||||||  |||| | ||| ||||| ||||||||||||    
T  48212584 gagaatatgttaggtttataaaaagagaggttagaaatagagaaacagaatacgtgaaaacagtttttgggag-aaaagggagaaa 48212668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 15700887 - 15700947
Alignment:
Q  249 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||| | ||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaaca 15700947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 48212726 - 48212793
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa--gggtttaaca 309  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||  ||||||||||    
T  48212726 ctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaaca 48212793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 566 - 621
Target Start/End: Complemental strand, 37538170 - 37538116
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  37538170 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatgatg 37538116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 3287801 - 3287743
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 298  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||    
T  3287801 caatctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 44374968 - 44374865
Alignment:
Q  171 ggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 269  Q
    |||||||||| |||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||||||| || ||||||||    
T  44374968 ggagaaaaagagagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtgagagtaactttc 44374871  T
Q  270 tctaat 275  Q
    ||||||    
T  44374870 tctaat 44374865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 44383833 - 44383730
Alignment:
Q  171 ggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 269  Q
    |||||||||| |||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||||||| || ||||||||    
T  44383833 ggagaaaaagagagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtgagagtaactttc 44383736  T
Q  270 tctaat 275  Q
    ||||||    
T  44383735 tctaat 44383730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 619
Target Start/End: Complemental strand, 38294249 - 38294197
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatga 619  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  38294249 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatga 38294197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 4690662 - 4690726
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||| ||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 4690726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 16463196 - 16463097
Alignment:
Q  170 gggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 268  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||| || ||||| ||| | ||| | | ||||||||||||||| | ||||||||    
T  16463196 gggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgcggctaacttt 16463098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 24269937 - 24269977
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  24269937 tcaaccaatctaaggtaagggtgggattaactttctctaat 24269977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 33059395 - 33059348
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  33059395 ttaattgatgattt-gtagttggaattatgtgaagcattgttgatgatg 33059348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 37539570 - 37539470
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    ||||| |||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||| ||||||||||||||||| |||| |||    
T  37539570 aaaagagagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaagtaagggtgggactaacattctataa 37539471  T
Q  275 t 275  Q
    |    
T  37539470 t 37539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 48274409 - 48274357
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaa 427  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| |||||||||    
T  48274409 aagagtagataatctgatgaattaaagtaataagtggtgttcatgttgtagaa 48274357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 20586409 - 20586374
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  20586409 caatctaaggtaagggtgggactaactttctctaat 20586374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 48807320 - 48807355
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  48807320 caatctaaggtaagggtgggactaactttctctaat 48807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 4325985 - 4325919
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||||||    
T  4325985 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaatt 4325919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 14105590 - 14105656
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  |||||||||||||||||    
T  14105590 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatt 14105656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 14415607 - 14415673
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  |||||||||||||||||    
T  14415607 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatt 14415673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 19195752 - 19195714
Alignment:
Q  170 gggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19195752 gggagaaaaagggagaaagtgagaagtcagagaagagaa 19195714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 390 - 459
Target Start/End: Original strand, 708663 - 708732
Alignment:
Q  390 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 459  Q
    |||| ||||||||||||| ||||||| ||||||||||| || |||||||  ||||| ||||||| |||||    
T  708663 gatggattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgg 708732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 29052347 - 29052427
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| |||||||       ||||||||||||||||||||  ||||||||||||||||||    
T  29052347 gttcaggctgtagaataaacataggttgagtttcctatcaa-------atttgggttgatgaaattgggacttttggagtgaaaactg 29052427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 8851120 - 8851189
Alignment:
Q  204 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  8851120 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgggactaactttctctaat 8851189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 11314302 - 11314349
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  11314302 ttaattgatgattta-tagttggaattatgtgaagcattgttgatgatg 11314349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 20214203 - 20214151
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    ||||||||||||||||||||||||||||||| |||  || ||||||| |||||    
T  20214203 aatctaaggtaagggtgggactaactttctcaaattctgagttgtataattct 20214151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 478
Target Start/End: Complemental strand, 37539334 - 37539270
Alignment:
Q  414 ttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||| || | |||||  ||||| ||||||| |||||||||||||| |||||||||    
T  37539334 ttcaggttgtagaataatcttaggttaagtttcctatcaaatttggaatttgggtagatgaaatt 37539270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 4071873 - 4071842
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  4071873 ctaaggtaagggtgggactaactttctctaat 4071842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 12754611 - 12754642
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaat 12754642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 14218890 - 14218925
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  14218890 caatctaaggtaagggtgagactaactttctctaat 14218925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 29052181 - 29052212
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  29052181 ctaaggtaagggtgggactaactttctctaat 29052212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 33557329 - 33557383
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||  ||| || |||||||||||||||||| ||||||||    
T  33557329 agcaaaattaattgatgattg-gtatttggaattatgtgaagcattgctgatgatg 33557383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 35771440 - 35771471
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  35771440 ctaaggtaagggtgggactaactttctctaat 35771471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 12372326 - 12372296
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaat 12372296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 12465260 - 12465290
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaat 12465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 13147472 - 13147502
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  13147472 taaggtaagggtgggactaactttctctaat 13147502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 16078382 - 16078352
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaat 16078352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 44190379 - 44190445
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| ||||||| | ||| |||||||| |||||||||    
T  44190379 tgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggatttgggtagatgaaatt 44190445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 831861 - 831914
Alignment:
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||  |||||||||  ||||||||||  |||||||||||||||||||||    
T  831861 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaaca 831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 1197041 - 1197094
Alignment:
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||  |||||||||  ||||||||||  |||||||||||||||||||||    
T  1197041 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaaca 1197094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 47974819 - 47974868
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||||||||||||| |||||||||||||||||  |  |||||||||||||    
T  47974819 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattct 47974868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 12322891 - 12322960
Alignment:
Q  204 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||| ||||||  |||||||| ||||  ||| | ||| |||||||||||||| ||||||||||||||||    
T  12322891 gagaaaaggagcaatcttgtagagtccga--tcatctaatttaaggtaagggtggaactaactttctctaat 12322960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 15095627 - 15095667
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||| |||||||||||||||||||||||||| ||| |||||    
T  15095627 tcaatcaatctaaggtaagggtgggactaaccttcactaat 15095667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 21660130 - 21660083
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  21660130 ttaattgatgattt-gtagttcgacttatgtgaagcattgttaatgatg 21660083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 33002205 - 33002157
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||||||||||| ||||||||||||||||||  |  |||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagttgtatgattct 33002157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 33060504 - 33060460
Alignment:
Q  231 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| ||| ||||||||||||||||||||||||| |||| ||||    
T  33060504 gaattgaacaaatctaaggtaagggtgggactaaccttctttaat 33060460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 42565691 - 42565739
Alignment:
Q  112 taggtttataaaaagagaggttaggaatagagagacataatacgtagaa 160  Q
    |||||||| || |||||||||||||||||||||| || || ||||||||    
T  42565691 taggtttaaaataagagaggttaggaatagagagtcagaacacgtagaa 42565739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 468
Target Start/End: Original strand, 42565996 - 42566052
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    |||||||||||||||| ||| |||||||  |||| ||||||| |||| |||||||||    
T  42565996 tgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgaaatttgggt 42566052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 150 - 309
Target Start/End: Original strand, 35091 - 35250
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    ||||||||| ||| ||||| |||||||||||||||||| ||||| || ||||||||||| | ||||||| |||||||| |||||||||||||||||||||    
T  35091 aatacgtagtaaccgcttttgggagaaaaagggagaaaatgagaagttagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaagg 35190  T
Q  250 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||    
T  35191 taagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaaca 35250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 478
Target Start/End: Original strand, 35652 - 35716
Alignment:
Q  414 ttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||| || |||||||  ||||| ||||||| |||||||||||||| ||| |||||    
T  35652 ttcaggttgtagaataatcataggtttagtttcctatcaaatttggaatttgggtagataaaatt 35716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 156 - 309
Target Start/End: Complemental strand, 9622630 - 9622477
Alignment:
Q  156 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 255  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||||||||| | ||||||  |||||||| | |||||||| ||||||||||||||||    
T  9622630 tagaaactgcttttgggagaaaaagggagaaagtgagaagttagagaagagaagaggagcaaacttgtagagtctgaattcaatcaatctaaggtaaggg 9622531  T
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  9622530 tgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaaca 9622477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 156 - 309
Target Start/End: Complemental strand, 10273525 - 10273371
Alignment:
Q  156 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagg 254  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||| | ||||||| |||||||| | ||| ||  | ||||||||||||||    
T  10273525 tagaaactgcttttgggagaaaaatggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgaaatcgtctaatctaaggtaagg 10273426  T
Q  255 gtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  10273425 gtgggactagctttctctaataatgggttgtatgattctaaaaaggggtataaca 10273371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 55583322 - 55583184
Alignment:
Q  176 aaaagggagaaagtgagaggtca-----gagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttct 270  Q
    |||||||||||||||||| ||||     |||||||||| | ||||||  |||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  55583322 aaaagggagaaagtgagaagtcaaagaagagaagagaagaggagcaaacttgtagagtccgaattcaacctatctaaggtaagggtgggactagctttct 55583223  T
Q  271 ctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  55583222 ctaataatgggttgtatgattataaaaaggggtttaaca 55583184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 150 - 275
Target Start/End: Complemental strand, 13165279 - 13165154
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    ||||| ||||||||| ||| ||||||||| || ||||| ||||| |||||||||||||| | ||||||  |||||||| || ||||||||||||||||||    
T  13165279 aatacatagaaactgtttttgggagaaaagggaagaaattgagaagtcagagaagagaagaggagcaaacttgtagagtccaaattcaaccaatctaagg 13165180  T
Q  250 taagggtgggactaactttctctaat 275  Q
    |||||||||||||||| |||| ||||    
T  13165179 taagggtgggactaaccttctttaat 13165154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 102 - 309
Target Start/End: Complemental strand, 25514059 - 25513839
Alignment:
Q  102 gagaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcaga 200  Q
    |||||||||||||||||||||||||| ||||||| ||   |||  | | ||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  25514059 gagaatgtgttaggtttataaaaagaaaggttagaaagtcagaatagagaatacgtagaaactgcttttgggagaaaaatggagaaagtgagaagtcaga 25513960  T
Q  201 gaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgta 286  Q
    |||||||| |||             ||||||  |||||||| | ||  ||| | |||||||||||| |||||||||| ||||||||||||||| ||||||    
T  25513959 gaagagaagaatcttgtgagaagaggagcaatcttgtagagtctga--tcatctaatctaaggtaatggtgggactagctttctctaataatgagttgta 25513862  T
Q  287 tgattctaaaaaagggtttaaca 309  Q
    | ||||| |||||||||||||||    
T  25513861 taattctgaaaaagggtttaaca 25513839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 375 - 497
Target Start/End: Original strand, 10694372 - 10694494
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||| |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  10694372 aagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 10694471  T
Q  475 aattggtgcttttggagtgaaaa 497  Q
    |||||| ||||||||||||||||    
T  10694472 aattggggcttttggagtgaaaa 10694494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 375 - 478
Target Start/End: Complemental strand, 16296796 - 16296693
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||| || |||||||  ||||| ||||||| ||||| |||||||| ||| |    
T  16296796 aagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatta 16296697  T
Q  475 aatt 478  Q
    ||||    
T  16296696 aatt 16296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 376 - 478
Target Start/End: Complemental strand, 35660812 - 35660710
Alignment:
Q  376 agagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaa 475  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || |||| ||  ||||| ||||||| ||||| |||||||| ||||||    
T  35660812 agagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaa 35660713  T
Q  476 att 478  Q
    |||    
T  35660712 att 35660710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 14631192 - 14631124
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  14631192 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 14631124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 16296995 - 16296927
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  16296995 caatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaac 16296927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 478
Target Start/End: Complemental strand, 14549575 - 14549472
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||  ||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||  ||||| ||||||| ||||| |||||||| |||||    
T  14549575 aagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatga 14549476  T
Q  475 aatt 478  Q
    ||||    
T  14549475 aatt 14549472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 15008855 - 15008768
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| |||| || ||||| |||||||||||||||||||| |||||||||||||||||||    
T  15008855 gttcaggctgtagaataaacataggttgagtttcctataaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactg 15008768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 10908176 - 10908260
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaa 497  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||  |||||||||||||||||||| ||||||||||||||||    
T  10908176 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgttatttgggttgatgaaattggggcttttggagtgaaaa 10908260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 9639066 - 9638999
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| | ||||| ||||||||||||||    
T  9639066 aatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaac 9638999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 375 - 478
Target Start/End: Original strand, 19434786 - 19434889
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||| |||||||||| | ||||| ||||||||||||||||||| || |||||||  ||||| ||||||| ||||| |||| ||| |||||    
T  19434786 aagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattttggtagatga 19434885  T
Q  475 aatt 478  Q
    ||||    
T  19434886 aatt 19434889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 198 - 308
Target Start/End: Complemental strand, 33187000 - 33186892
Alignment:
Q  198 agagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 297  Q
    ||||||||||  | |||||| ||||||||| ||||  ||| | ||| ||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||    
T  33187000 agagaagagaggaggagcaattttgtagagtccga--tcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T
Q  298 aagggtttaac 308  Q
    |||||||||||    
T  33186902 aagggtttaac 33186892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 2424233 - 2424295
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataata 153  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  2424233 ttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacataata 2424295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 12424290 - 12424355
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattct--aaaaaagggtttaac 308  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||    
T  12424290 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaac 12424355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 13847254 - 13847193
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 305  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  13847254 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 40620457 - 40620332
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  |||||||  |||| | || ||||||| |||||| || |||| ||||| ||||||||||||||    
T  40620457 aagagtaggtaattcaatgaattaacataagaattgaagttcaggccgtaggataaacataggttgagtttcctctcaaatttgggatttgggttgatga 40620358  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  40620357 aattggggcttttggagtgaaaactg 40620332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 19565764 - 19565851
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 178  Q
    |||||||||  |||||| |||||| ||||||||||||||||||||||||||||| ||| |||||||  |||| | ||| |||||||||    
T  19565764 ttggaataagagagaatatgttagatttataaaaagagaggttaggaatagagaaacagaatacgtgaaaacagtttttgggagaaaa 19565851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 15239811 - 15239879
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||| ||||| |||||||||||||||  |||||| | ||| ||||||||||||||    
T  15239811 caatctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaac 15239879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 26446260 - 26446197
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    |||| |||||||| |||||| ||||||||||||||||||||||| ||||| ||||| |||||||    
T  26446260 ctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaa 26446197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 19434554 - 19434607
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  19434554 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 19434607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 26921354 - 26921407
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagaga 144  Q
    |||||||||  |||||| |||||||||||||||||||||||||| |||||||||    
T  26921354 ttggaataagggagaatatgttaggtttataaaaagagaggttatgaatagaga 26921407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 35661002 - 35660945
Alignment:
Q  251 aagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaac 35660945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 569 - 621
Target Start/End: Complemental strand, 9621406 - 9621355
Alignment:
Q  569 aaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  9621406 aaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatgatg 9621355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 15191329 - 15191285
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 203  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  15191329 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaa 15191285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 621
Target Start/End: Complemental strand, 10282953 - 10282899
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||    
T  10282953 agcaaaattaattgatgattt-gtagtttgaattatgtgaagtattgctgatgatg 10282899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 12623506 - 12623419
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 178  Q
    |||||||||  || ||| |||||||||||||||||||| |||||| |||||||| ||| |||||||  |||| | ||| |||||||||    
T  12623506 ttggaataagagataatatgttaggtttataaaaagaggggttagtaatagagaaacagaatacgtgaaaacagtttttgggagaaaa 12623419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 15115279 - 15115244
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  15115279 caatctaaggtaagggtgggactaactttctctaat 15115244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 307
Target Start/End: Complemental strand, 18463139 - 18463014
Alignment:
Q  182 gagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgg 280  Q
    |||||||||||| ||||||||| |||| | | | ||| ||||||||    ||||| |||||||||||||||| |||||||||||| |||| |||| |||     
T  18463139 gagaaagtgagaagtcagagaaaagaagaagggaaagcttgtagagttgagaatttaaccaatctaaggtaaaggtgggactaaccttctttaatcatga 18463040  T
Q  281 gttgtatgattctaaaaaagggtttaa 307  Q
    | | ||| ||||| |||||||||||||    
T  18463039 g-tatataattctgaaaaagggtttaa 18463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 18463220 - 18463152
Alignment:
Q  89 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 157  Q
    |||||||||||  |||||||||||||||| | || | |||||||||||||||||||| || || |||||    
T  18463220 aattggaataagggagaatgtgttaggttaagaataggagaggttaggaatagagagtcagaacacgta 18463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 2424386 - 2424449
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    |||||||||||||| |||||||||||||||||  |  ||||||| ||| | |||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaa 2424449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 9924211 - 9924176
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  9924211 caatctaaggtaagggtgagactaactttctctaat 9924176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 14549817 - 14549782
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  14549817 caatctaaggtaagggtgagactaactttctctaat 14549782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 15009016 - 15008985
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  15009016 ctaaggtaagggtgggactaactttctctaat 15008985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 21062694 - 21062663
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  21062694 ctaaggtaagggtgggactaactttctctaat 21062663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 37019727 - 37019692
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  37019727 caatctaaggtaagggtgtgactaactttctctaat 37019692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 11425995 - 11425965
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaat 11425965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 14477697 - 14477624
Alignment:
Q  231 gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 305  Q
    ||||| |||||||||||||||||||||| |||||| |||| |||| ||| | | ||| ||||| |||||||||||    
T  14477697 gaatttaaccaatctaaggtaagggtggcactaaccttctttaatcatgag-tatataattctgaaaaagggttt 14477624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 15747787 - 15747837
Alignment:
Q  259 gactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||  ||| ||||||| ||||| |||||||||||||||    
T  15747787 gactaactttctctaaagatgagttgtataattctgaaaaagggtttaaca 15747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 25091705 - 25091675
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaat 25091675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 35811376 - 35811406
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  35811376 taaggtaagggtgggactaactttctctaat 35811406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 40230362 - 40230328
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||| ||||    
T  40230362 aatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 53630474 - 53630504
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaat 53630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 12623378 - 12623338
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  12623378 tcaatcaatctaaggtaagggtgggactaaccttctttaat 12623338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 617
Target Start/End: Complemental strand, 14476567 - 14476524
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgat 617  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||    
T  14476567 ttaattgatgattt-gtagttggaattatgtgacgcattgttgat 14476524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 19022400 - 19022364
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataa 277  Q
    |||||||||||| |||| |||||||||||||||||||    
T  19022400 aatctaaggtaaaggtgagactaactttctctaataa 19022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 28386133 - 28386069
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  28386133 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 28386069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 98; Significance: 6e-48; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 68637 - 68790
Alignment:
Q  156 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 255  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||   || ||| |||||||||  ||||||||| ||||||||||||||||    
T  68637 tagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaaagaagtggaacaaatttgtagagttcgaattcaatcaatctaaggtaaggg 68736  T
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  68737 tgggactacctttctctaataatgggttatatgattctaaaaacgggtttaaca 68790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 57179 - 57084
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 187  Q
    |||||||||| |||||| | |||||||||||||||||||  |||||||| |||| ||| |||||||  |||| | ||| ||||| ||||||||||||    
T  57179 ttggaataaaagagaatatattaggtttataaaaagagaaattaggaatggagaaacagaatacgtgaaaacagtttttgggag-aaaagggagaaa 57084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 6e-48; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 148 - 309
Target Start/End: Complemental strand, 20313424 - 20313265
Alignment:
Q  148 ataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaa 247  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| | |||||||||||||||| || ||||||||||||||||    
T  20313424 ataatacgtagaaactgcttttgggagaaaaagggagaaagtgataagtcagagaagagaagaggagcaagtttgtagagtcctaattcaaccaatctaa 20313325  T
Q  248 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||| | |||||||||| |||||| ||| ||||| ||| |||||||||||    
T  20313324 ggtaagggtgggactagc-ttctctaatagtgggtt-tataattctgaaatagggtttaaca 20313265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 16063873 - 16063740
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| || |||||| ||||| | ||||||| |||||||| | | ||||||||||||||||||||||||||||||| ||||||||||    
T  16063873 aaaagggagaaagtgagaagttagagaaagagaagaggagcaagcttgtagagtctgtattcaaccaatctaaggtaagggtgggactacctttctctaa 16063774  T
Q  275 taatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||| ||||||||||||||||||||    
T  16063773 taatgggttgtataattctaaaaaagggtttaac 16063740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 153 - 275
Target Start/End: Complemental strand, 21504282 - 21504161
Alignment:
Q  153 acgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaa 252  Q
    |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||    
T  21504282 acgtagaaactgcttt-gggagaaaaggggagaaagtgagaagtaagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaaggtaa 21504184  T
Q  253 gggtgggactaactttctctaat 275  Q
     |||||||||||| |||| ||||    
T  21504183 aggtgggactaaccttctttaat 21504161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 159 - 309
Target Start/End: Original strand, 32607229 - 32607380
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaat--gagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 255  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||| |||||||   ||||||  | |||||| |||| |  | | |||||||||||||||    
T  32607229 aaactgcttttgggagaaaaagagagaaagtgagaagtcagagaaagagaaaagaggagcaatctcgtagagaccgatt--atctaatctaaggtaaggg 32607326  T
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  32607327 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 32607380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 78 - 298
Target Start/End: Original strand, 21398464 - 21398697
Alignment:
Q  78 ctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaactgctttcgggagaa 176  Q
    |||||| ||||||| |||||||  |||||||||||||||||||||||||| ||||||| ||   | |  | |  ||||||  |||||||||| |||||||    
T  21398464 ctgaggggcaaaataggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcataatagaatatacgtgcaaactgcttttgggagaa 21398563  T
Q  177 aaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggact 262  Q
    ||||||||||||||||| |||||||||||||| |||             ||||||  |||||||| ||||  ||| | |||||||||||||||||||| |    
T  21398564 aaagggagaaagtgagaagtcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccga--tcatctaatctaaggtaagggtgggatt 21398661  T
Q  263 aactttctctaataatgggttgtatgattctaaaaa 298  Q
    | ||||||||||||||||||||||||||||||||||    
T  21398662 agctttctctaataatgggttgtatgattctaaaaa 21398697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 18744931 - 18744863
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  18744931 caatctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaac 18744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 17011653 - 17011528
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  17011653 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 17011554  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| ||||| |||||||||||||    
T  17011553 aattggggctttaggagtgaaaactg 17011528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 265963 - 265838
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||||  ||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||| |||||||    
T  265963 aagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttggattgatga 265864  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||| ||||||||||||    
T  265863 aattggggcttttcgagtgaaaactg 265838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 29448765 - 29448640
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||| || |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||  ||||| ||||||||    
T  29448765 aagagtaggtaaaccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatga 29448666  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  29448665 aattggggcttttggagtgaaaactg 29448640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 23199207 - 23199270
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaac 23199270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 375 - 478
Target Start/End: Original strand, 36508870 - 36508973
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||| |||||||||||||||||| ||||||| ||||||||||| || |||||||  ||||| ||||||| ||||| |||| ||| ||| |    
T  36508870 aagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagatca 36508969  T
Q  475 aatt 478  Q
    ||||    
T  36508970 aatt 36508973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 26750237 - 26750142
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 187  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||  |||| | ||| ||||| ||||||||||||    
T  26750237 ttggaaaaaaggagaatatgttaggtttataaaaagagaggttaggactagagaagcataatacgtgaaaacagtttttgggag-aaaagggagaaa 26750142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 31622239 - 31622121
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaagagaaaatg--agcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctcta 273  Q
    |||||||||||||||||| ||||||||| |||||||   |||||| |||||||| | |||  || | |||||||||||||||||||| ||||||||||||    
T  31622239 aaaagggagaaagtgagaagtcagagaa-agaaaatagaagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggattaactttctcta 31622141  T
Q  274 ataatgggttgtatgattct 293  Q
    ||  | |||||||| |||||    
T  31622140 attttaggttgtataattct 31622121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 26758599 - 26758670
Alignment:
Q  137 aatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    ||||||||| || ||||||||||||||||||| | |||||||||||||||||||||| ||| || |||||||    
T  26758599 aatagagagtcagaatacgtagaaactgcttttgcgagaaaaagggagaaagtgagaagtcggataagagaa 26758670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 31622023 - 31621964
Alignment:
Q  250 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  31622023 taagggtggaactatctttctctaataattggttgtatgattctaaaaatgggtttaaca 31621964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 6551285 - 6551353
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||| |||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  6551285 caatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaac 6551353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 660994 - 660907
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 178  Q
    |||||||||  |||||| ||||||  |||||||||||||||||||||||||||| ||| |||||||  |||| | ||| |||||||||    
T  660994 ttggaataagggagaatatgttagacttataaaaagagaggttaggaatagagaaacagaatacgtgaaaacagtttttgggagaaaa 660907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 1627071 - 1627121
Alignment:
Q  249 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 299  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaa 1627121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 20197504 - 20197570
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 157  Q
    |||||||||  || ||| |||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  20197504 ttggaataagggaaaatatgttaggtttataaaaagagaggttaggaatagagaaacggaatacgta 20197570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 8833052 - 8833117
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    |||||||||  |||||| | |||||||||||||||||| ||||||||||||||| ||| |||||||    
T  8833052 ttggaataagggagaatatattaggtttataaaaagagtggttaggaatagagaaacagaatacgt 8833117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 14025664 - 14025748
Alignment:
Q  102 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 187  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||| |||| ||  |||| | ||| ||||| ||||||||||||    
T  14025664 gagaatatgttaagtttataaaaagagaggttaggaatagagaaacagaataggtgaaaacagtttttgggag-aaaagggagaaa 14025748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 21404305 - 21404189
Alignment:
Q  89 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaag 188  Q
    |||||||||||  |||||| ||| || |||| || | |||||||||||||||||||| || || ||||| ||||   ||| |||||||||||  ||||||    
T  21404305 aattggaataagggagaatatgtaag-tttagaataggagaggttaggaatagagagtcagaacacgtaaaaacaatttttgggagaaaaag--agaaag 21404209  T
Q  189 tgagaggtcagagaagagaa 208  Q
    ||||| ||||||||||||||    
T  21404208 tgagaagtcagagaagagaa 21404189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 20469171 - 20469206
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  20469171 caatctaaggtaagggtgggactaactttctctaat 20469206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 438
Target Start/End: Original strand, 20765373 - 20765436
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggt 438  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| | ||||||| || |||||||    
T  20765373 aagagtagataatctgatgaattaaagtaataagtggtgttcatgatgtagaataatcataggt 20765436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 21300040 - 21300074
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||||||    
T  21300040 aatctaaggtaagggtgggactaactttctctaat 21300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 474
Target Start/End: Original strand, 21398962 - 21399024
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||||||||||| || |||||| |||||||||||| || ||||| |||||||| |||||    
T  21398962 tgttcaggttgtagaataaacataggaagagttttctataaaatttgggatttgggtagatga 21399024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 21617924 - 21617958
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||||||    
T  21617924 aatctaaggtaagggtgggactaactttctctaat 21617958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 660841 - 660785
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagg 301  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||| ||||| |||||||    
T  660841 ctaaggtaaggg-gggactagctttctctaataaggggttgtataattctgaaaaagg 660785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 20566608 - 20566568
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  20566608 tcaatcaatctaaggtaagggtgagactaactttctctaat 20566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 33472726 - 33472790
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||||    
T  33472726 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaa 33472790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 36508633 - 36508697
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||| |||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 36508697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 17011781 - 17011750
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  17011781 ctaaggtaagggtgggactaactttctctaat 17011750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 266090 - 266060
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  266090 taaggtaagggtgggactaactttctctaat 266060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 1626767 - 1626815
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaata 140  Q
    |||||||||  |||||| |||||||||||| |||||||||||||||||||    
T  1626767 ttggaataagggagaatatgttaggtttat-aaaagagaggttaggaata 1626815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 21504064 - 21503971
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    |||||||| | |||| |||||||||  ||| || || |||||||||||||||| || ||||||| |||||| ||||  | ||||| ||||||||    
T  21504064 aagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggatttgggt 21503971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 30616663 - 30616602
Alignment:
Q  248 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||| ||||||||||||  |  ||||||||||||| |||| || |||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaaatggatttaaca 30616602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 589 - 621
Target Start/End: Original strand, 21402109 - 21402141
Alignment:
Q  589 tagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||| |||||||||||||||||||||||||||    
T  21402109 tagttggaattatgtgaagcattgttgatgatg 21402141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 21403526 - 21403479
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| ||||||||||| |||||||| ||||||    
T  21403526 ttaattgatgattt-gtagttggaattatgtgacgcattgttaatgatg 21403479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 21404151 - 21404107
Alignment:
Q  231 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| |||||||||||||||||| |||||||||| |||| ||||    
T  21404151 gaatttaaccaatctaaggtaaggatgggactaaccttctttaat 21404107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 21419750 - 21419703
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| ||||||||||| |||||||| ||||||    
T  21419750 ttaattgatgattt-gtagttggaattatgtgacgcattgttaatgatg 21419703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 27868737 - 27868801
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  27868737 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 27868801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 28344899 - 28345052
Alignment:
Q  156 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 255  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||| | |||||| | |||| || |||||||||||| ||||||| ||||||    
T  28344899 tagaaactgcttttgggagaaaaatggagaaagtgagaagtcagagaagagaagaggagcaaatatgtacagtccgaattcaacctatctaagataaggg 28344998  T
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    || ||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  28344999 tgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaaca 28345052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 150 - 309
Target Start/End: Complemental strand, 23801649 - 23801484
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgag---caagtttgtagagcccgaattcaacca----a 242  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| | |||   |||| |||||||| || ||||||| ||    |    
T  23801649 aatacgtagaaactgattt-gggagaaaaagggagaaagtgagaagtcagagaagagaagaagaggagcaagcttgtagagtccaaattcaatcatctaa 23801551  T
Q  243 tctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23801550 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 23801484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 91 - 308
Target Start/End: Complemental strand, 21369511 - 21369282
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtg 190  Q
    |||||||||  || |||||||||||| |||||| ||||||||||||||||||||   | ||||| ||||||||| ||| |||||||||| ||||||||||    
T  21369511 ttggaataagggataatgtgttaggtgtataaatagagaggttaggaatagagaatgagaatacatagaaactgtttttgggagaaaaaaggagaaagtg 21369412  T
Q  191 agaggtcagagaag--------------agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaata 276  Q
    ||| ||||||||||              |||| ||||||||  |||||||| ||||  ||| | ||||||||||||||||||||| | |||||||||| |    
T  21369411 agaagtcagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccga--tcatctaatctaaggtaagggtgggacaagctttctctaaca 21369314  T
Q  277 atgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||| ||||| ||||||||||||||    
T  21369313 atgggttgtataattctgaaaaagggtttaac 21369282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 36734376 - 36734513
Alignment:
Q  170 gggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 269  Q
    |||||||||||||||||||||||| || |||||  |||| | ||||||| ||| |||| |||||||||| ||||||||||||||||||||| |||| |||    
T  36734376 gggagaaaaagggagaaagtgagaagttagagagaagaagaggagcaagcttgcagagtccgaattcaatcaatctaaggtaagggtgggattaac-ttc 36734474  T
Q  270 tctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||| ||| ||||||||| |||||||||||    
T  36734475 tctaataatgggtt-tataattctaaaatagggtttaaca 36734513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 17307623 - 17307508
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 257  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  17307623 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaaaatcgtagagaccga--tcatctaatctaaggtaagggtg 17307526  T
Q  258 ggactaactttctctaat 275  Q
    ||||||||||||||||||    
T  17307525 ggactaactttctctaat 17307508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 21315471 - 21315539
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  21315471 caatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 21315539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 21335261 - 21335329
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  21335261 caatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 21335329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 375 - 478
Target Start/End: Original strand, 149633 - 149736
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||| ||| || |||||||  ||||| ||||||| ||||| |||||||| |||||    
T  149633 aagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatga 149732  T
Q  475 aatt 478  Q
    ||||    
T  149733 aatt 149736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 18358132 - 18358219
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  18358132 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactg 18358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 25184114 - 25183989
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||  ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  25184114 aagagtaggtaattcaatgaattaacataagaattgaagttcagactgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 25184015  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  25184014 aattggggcttttggagtgaaaactg 25183989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 31346008 - 31345921
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| | ||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  31346008 gttcaggctatagaataaacataggttgagtttcctatcaaatttggtatttgggttgatgaaattggggcttttggagtgaaaactg 31345921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 14179573 - 14179679
Alignment:
Q  103 agaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag 201  Q
    ||||||||||||||||||||||||| ||||||| ||   |||  | | || |||||||||||||||| |||||||||||||||||||||||| || ||||    
T  14179573 agaatgtgttaggtttataaaaagaaaggttagaaagtcagaatagagaagacgtagaaactgcttttgggagaaaaagggagaaagtgagaagttagag 14179672  T
Q  202 aagagaa 208  Q
    |||||||    
T  14179673 aagagaa 14179679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 379 - 470
Target Start/End: Original strand, 14183597 - 14183688
Alignment:
Q  379 gtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttg 470  Q
    |||| |||||||||||| ||   |||||| ||||||||||||||| ||| || |||||||||||||| ||||||| ||||||||||||||||    
T  14183597 gtagataatccgatgaactagtttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggaatttgggttg 14183688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 21915511 - 21915424
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| |||| || ||||| |||| ||||||||||||||| |||||||||||||||||||    
T  21915511 gttcaggctgtagaataaacataggttgagtttcctataaaatttgggatttaggttgatgaaattggggcttttggagtgaaaactg 21915424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 14183311 - 14183417
Alignment:
Q  103 agaatgtgttaggtttataaaaagagaggttaggaa-tagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag 201  Q
    ||||||||||||||||||||||||| ||||||| || |  | | | | ||||||||||||||||||| ||||||||||||||||||||| || ||||| |    
T  14183311 agaatgtgttaggtttataaaaagaaaggttagaaagtcaaaatagagaatacgtagaaactgcttttgggagaaaaagggagaaagtgggaagtcagtg 14183410  T
Q  202 aagagaa 208  Q
    || ||||    
T  14183411 aaaagaa 14183417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 21081134 - 21081219
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaac 498  Q
    ||||||| ||||||| || |||| || |||||| ||||||| ||| | |||||||||||||||||||| |||||||||||||||||    
T  21081134 gttcaggctgtagaataaacataagttgagtttcctatcaaatttaggatttgggttgatgaaattggggcttttggagtgaaaac 21081219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 1383779 - 1383863
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 459  Q
    |||||||| |||||||||||||||| ||||||| |||| |||||||||||||| || |||||||  ||||| ||||||| |||||    
T  1383779 aagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 1383863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 23610679 - 23610615
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||    
T  23610679 ctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaac 23610615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 28652678 - 28652762
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 459  Q
    |||||||| |||||| ||||||||||||||||| || ||||||||| |||||| || |||||| |||||||||||| || |||||    
T  28652678 aagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataatcataggaagagttttctataaaatttgg 28652762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 23801418 - 23801351
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagag 442  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||    
T  23801418 aagagtaggtaacccgatgaattaaggtaataactggtgttcaggttgtagaataataataggtagag 23801351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 149497 - 149555
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 299  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||    
T  149497 aatctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaa 149555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 23610830 - 23610745
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 178  Q
    |||||||||  |||||| |||||||||||||||  ||||||||||||||||||| |||||||||||  |||| | ||| |||||||||    
T  23610830 ttggaataagggagaatatgttaggtttataaa--gagaggttaggaatagagaaacataatacgtgaaaacagtttttgggagaaaa 23610745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 19196946 - 19197000
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  19196946 agcaaaattaattgatgattt-gtagttggaattatgtgaagtattgttgatgatg 19197000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 45528715 - 45528635
Alignment:
Q  126 gagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    |||||||||||||||||||| || || ||||| |||| | ||| ||||||||||  |||||||||||| ||||||||||||||    
T  45528715 gagaggttaggaatagagagtcagaacacgtaaaaacagtttttgggagaaaaa--gagaaagtgagaagtcagagaagagaa 45528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 45536109 - 45536029
Alignment:
Q  126 gagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    |||||||||||||||||||| || || ||||| |||| | ||| ||||||||||  |||||||||||| ||||||||||||||    
T  45536109 gagaggttaggaatagagagtcagaacacgtaaaaacagtttttgggagaaaaa--gagaaagtgagaagtcagagaagagaa 45536029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 19647448 - 19647388
Alignment:
Q  85 gcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag 145  Q
    |||||||||||||||  |||||||||||||||| | || | ||||||||||||||||||||    
T  19647448 gcaaaattggaataagggagaatgtgttaggttaagaataggagaggttaggaatagagag 19647388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 458
Target Start/End: Original strand, 14179855 - 14179938
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttg 458  Q
    |||||||| ||||| |||||| || | |||||| ||||||||||||||| ||| || ||||||||| |||| ||||||| ||||    
T  14179855 aagagtagataatctgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagtgtttcctatcaaatttg 14179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 20005839 - 20005919
Alignment:
Q  126 gagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    |||||||||||||||||||  ||||| ||||| |||| | ||  ||||||||||  |||||||||||| ||||||||||||||    
T  20005839 gagaggttaggaatagagatgcataacacgtaaaaacagtttctgggagaaaaa--gagaaagtgagaagtcagagaagagaa 20005919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 24516243 - 24516208
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  24516243 caatctaaggtaagggtgggactaactttctctaat 24516208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 27852725 - 27852690
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  27852725 caatctaaggtaagggtgggactaactttctctaat 27852690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 3539893 - 3539859
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||||||    
T  3539893 aatctaaggtaagggtgggactaactttctctaat 3539859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 22502027 - 22501993
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||||||    
T  22502027 aatctaaggtaagggtgggactaactttctctaat 22501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 22509961 - 22509927
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||||||    
T  22509961 aatctaaggtaagggtgggactaactttctctaat 22509927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 25142260 - 25142226
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||||||    
T  25142260 aatctaaggtaagggtgggactaactttctctaat 25142226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 357934 - 357885
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  357934 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 480
Target Start/End: Complemental strand, 19647155 - 19647054
Alignment:
Q  379 gtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||| |||||| |||||||||  ||| || || |||||||||||||||| ||| |||||||  |||| ||||||| ||||| |||| ||| | |||||||    
T  19647155 gtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgggatttaggtagttgaaatt 19647056  T
Q  479 gg 480  Q
    ||    
T  19647055 gg 19647054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 27852802 - 27852765
Alignment:
Q  171 ggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27852802 ggagaaaaagggagaaagtgagaagtcagagaagagaa 27852765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 14184904 - 14184951
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  14184904 ttaattgatgattta-tagttggaattatgtgaagcattgttgatgatg 14184951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 23338562 - 23338626
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  23338562 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23338626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 45535991 - 45535947
Alignment:
Q  231 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||||    
T  45535991 gaatttaaccaatctaaggtaagggtgggactaaccttctttaat 45535947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 20005958 - 20006032
Alignment:
Q  232 aattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    |||| ||||||||||||||||||||||||||| | |||| |||| ||| | | ||| ||||| |||||||||||||    
T  20005958 aatttaaccaatctaaggtaagggtgggactagccttctttaatcatgag-tctataattctgaaaaagggtttaa 20006032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 21080968 - 21080999
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  21080968 ctaaggtaagggtgggactaactttctctaat 21080999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 40912373 - 40912342
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  40912373 ctaaggtaagggtgggactaactttctctaat 40912342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 2523747 - 2523777
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  2523747 taaggtaagggtgggactaactttctctaat 2523777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 5031129 - 5031159
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaat 5031159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 20590445 - 20590511
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    ||||||||| |||||| || |||||||  ||||||||||||| |||||  ||||||| |||||||||    
T  20590445 tgttcaggtggtagaataatcataggttaagttttctatcaaatttggggtttgggtagatgaaatt 20590511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 24780840 - 24780870
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaat 24780870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 34491239 - 34491304
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaa-taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||| ||| |||||| ||| | ||||||| ||||| |||||||||||||||    
T  34491239 ctaaggtaagggtgggactagctt-ctctaaataacgagttgtataattctgaaaaagggtttaaca 34491304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 41301092 - 41301158
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| |||||||  |||| |||||||| |||||||||    
T  41301092 tgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagatgaaatt 41301158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 45528597 - 45528563
Alignment:
Q  231 gaattcaaccaatctaaggtaagggtgggactaac 265  Q
    ||||| |||||||||||||||||||||||||||||    
T  45528597 gaatttaaccaatctaaggtaagggtgggactaac 45528563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 379 - 489
Target Start/End: Complemental strand, 45535847 - 45535737
Alignment:
Q  379 gtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||| |||||| |||||||||  ||| || || |||||||||||||||| ||| |||||||  |||| || |||| ||||| |||||||| | || ||||    
T  45535847 gtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatttgggtagttgtaatt 45535748  T
Q  479 ggtgcttttgg 489  Q
    || | ||||||    
T  45535747 ggggattttgg 45535737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 22695359 - 22695322
Alignment:
Q  171 ggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    ||||||||||||||||||||||| || |||||||||||    
T  22695359 ggagaaaaagggagaaagtgagaagtaagagaagagaa 22695322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 28346457 - 28346496
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaa 606  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  28346457 agcaaaattaattgatga-tttgtagttggaattatgtgaa 28346496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 30212667 - 30212714
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  30212667 ttaattgatgattt-gtagttggacttatgtgaagcattgttaatgatg 30212714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 150 - 309
Target Start/End: Original strand, 43692 - 43849
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    ||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||| | ||||||| |||||||| | |||||||||||||||||||    
T  43692 aatacgtagaaactgcttttgggatacaaagggagaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtcggaattcaaccaatctaagg 43791  T
Q  250 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||| | ||||||||||||||||| ||| ||||| ||| |||||||||||    
T  43792 taagggtgggactagc-ttctctaataatgggtt-tataattctgaaatagggtttaaca 43849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 150 - 283
Target Start/End: Original strand, 39000 - 39132
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| | ||||||| |||| ||| |||||||||||||||||||||    
T  39000 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtccgagaagagaagaggagcaagcttgttgagtccgaattcaaccaatctaagg 39099  T
Q  250 taagggtgggactaactttctctaataatgggtt 283  Q
    |||||||||||||| | |||||||||||||||||    
T  39100 taagggtgggactagc-ttctctaataatgggtt 39132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 29045189 - 29045064
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||| ||||||||||| || |||||||||||||||| || |||||||||||||||||||||| ||||| ||||| ||||||||    
T  29045189 aagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgagttgatga 29045090  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| ||| |||||||||||||||    
T  29045089 aattggggctattggagtgaaaactg 29045064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 150 - 275
Target Start/End: Complemental strand, 1819099 - 1818974
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 249  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||| | ||||||| || ||||| | |||||||||||||||||||    
T  1819099 aatacgtagaaactgtttttgggagaaaaggggagaaagtgagaagtcagagaagagaagaggagcaagcttatagagtctgaattcaaccaatctaagg 1819000  T
Q  250 taagggtgggactaactttctctaat 275  Q
    |||||||| ||||||| |||| ||||    
T  1818999 taagggtgagactaaccttctttaat 1818974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 13285890 - 13285739
Alignment:
Q  156 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagg 254  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||||| |||||||| | |||  || | ||||||||||||||    
T  13285890 tagaaactgctttcgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgaaaccatctaatctaaggtaagg 13285791  T
Q  255 gtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 306  Q
    ||||||||||| |||| |||| ||| |||  || ||||| |||| |||||||    
T  13285790 gtgggactaaccttctataatcatgagtttcataattctgaaaaggggttta 13285739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 159 - 308
Target Start/End: Original strand, 19825401 - 19825549
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 257  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  19825401 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtg 19825498  T
Q  258 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
     ||||| |||||||||||||||||||| || ||||| ||||||| ||||||    
T  19825499 agactagctttctctaataatgggttgcataattctgaaaaaggttttaac 19825549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 203 - 309
Target Start/End: Complemental strand, 10446311 - 10446205
Alignment:
Q  203 agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 302  Q
    |||||| | |||||||  ||||||| | ||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  10446311 agagaagaggagcaagcatgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaagggg 10446212  T
Q  303 tttaaca 309  Q
    |||||||    
T  10446211 tttaaca 10446205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 35057671 - 35057577
Alignment:
Q  170 gggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaa 264  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| || ||||||| ||||||||||||| |||||||||||    
T  35057671 gggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaaacttgtagagtccaaattcaatcaatctaaggtaatggtgggactaa 35057577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 29045392 - 29045259
Alignment:
Q  176 aaaagggagaaagtgagaggtcagaga-agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| |||||||| |||||| | ||||||| || |||||  || | ||| | | ||||||||||||||| ||||| ||||||||||    
T  29045392 aaaagggagaaagtgagaagtcagagagagagaagaggagcaagctt-tagagttcggaatcatctattctaaggtaagggtgagactagctttctctaa 29045294  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||| ||| | |||||||||||||||    
T  29045293 taatgggttgtataattttgaaaaagggtttaaca 29045259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 15891696 - 15891821
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| |||| || || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  15891696 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 15891795  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  15891796 aattggggcttttggagtgaaaactg 15891821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 15900781 - 15900906
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| |||| || || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  15900781 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 15900880  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  15900881 aattggggcttttggagtgaaaactg 15900906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 413 - 497
Target Start/End: Complemental strand, 27557551 - 27557467
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaa 497  Q
    ||||||||||||||| || ||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||||||||||||||||    
T  27557551 gttcaggttgtagaataaacataggttgagttttctatcaaatttgggatttgagtcgatgaaattggggcttttggagtgaaaa 27557467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 23415793 - 23415706
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||    
T  23415793 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgacaactg 23415706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 18982634 - 18982561
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||| ||||||||||||| ||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  18982634 tcaatcaatctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaac 18982561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 21683074 - 21683138
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||    
T  21683074 ctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaac 21683138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 23658145 - 23658078
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| ||||||||||||||    
T  23658145 aatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaac 23658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 21682916 - 21683016
Alignment:
Q  86 caaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggaga 185  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||  |||| | ||| ||||| ||||||||||    
T  21682916 caaatttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacaaaatatgtgaaaacagtttttgggag-aaaagggaga 21683014  T
Q  186 aa 187  Q
    ||    
T  21683015 aa 21683016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 459
Target Start/End: Complemental strand, 25921926 - 25921842
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 459  Q
    |||||||  ||||| |||||||||||||||| | ||||||||||||||||||| || |||||| | |||||||||| ||||||||    
T  25921926 aagagtaaataatctgatgaattaaggtaatgattggtgttcaggttgtagaataatcataggaaaagttttctataaattttgg 25921842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 432 - 499
Target Start/End: Original strand, 15173637 - 15173704
Alignment:
Q  432 cataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaact 499  Q
    ||||||| |||||| ||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||    
T  15173637 cataggttgagtttcctatcaaatttgggatttggattgatgaaattggggcttttggagtgaaaact 15173704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 20410512 - 20410575
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||| | || ||||||||||||||||||||||| ||||| ||||||| ||||||    
T  20410512 taaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaac 20410575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 30673392 - 30673432
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  30673392 tcaaccaatctaaggtaagggtgggattaactttctctaat 30673432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 34140390 - 34140493
Alignment:
Q  180 gggagaaagtgagaggtcagagaag-agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 278  Q
    |||||||||||||| || ||||||| |||| | ||||||| ||||||||   | | ||| | ||||||||||||||||||||||| | ||||||||||||    
T  34140390 gggagaaagtgagaagttagagaaggagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggactagc-ttctctaataat 34140488  T
Q  279 gggtt 283  Q
    |||||    
T  34140489 gggtt 34140493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 34153006 - 34153109
Alignment:
Q  180 gggagaaagtgagaggtcagagaag-agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 278  Q
    |||||||||||||| || ||||||| |||| | ||||||| ||||||||   | | ||| | ||||||||||||||||||||||| | ||||||||||||    
T  34153006 gggagaaagtgagaagttagagaaggagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggactagc-ttctctaataat 34153104  T
Q  279 gggtt 283  Q
    |||||    
T  34153105 gggtt 34153109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 621
Target Start/End: Complemental strand, 10444998 - 10444944
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||    
T  10444998 agcaaaattaattgatgattt-gtagttgaaattatgtgaagtattgttgatgatg 10444944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 15890707 - 15890742
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  15890707 caatctaaggtaagggtgggactaactttctctaat 15890742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 621
Target Start/End: Complemental strand, 35056188 - 35056134
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||    
T  35056188 agcaaaattaattgatgattt-gtagttgaaattatgtgaagtattgttgatgatg 35056134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 19167843 - 19167901
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||||||||||||||||||||||| | ||||||| ||||||| | |||||||| |||||    
T  19167843 tcaaccaatctaaggtaagggtggaattaactttgtctaatattaggttgtataattct 19167901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 19235185 - 19235127
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||||||||||||| ||||||||||| ||||||||||||||  | |||||||| |||||    
T  19235185 tcaaccaatctaagttaagggtgggattaactttctctaattttaggttgtataattct 19235127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 28948637 - 28948579
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| |||||||||||||||||| |||||||||||||||||  |  |||||||||||||    
T  28948637 tcaatcaatctaaggtaagggtgagactaactttctctaattctaagttgtatgattct 28948579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 621
Target Start/End: Complemental strand, 1817846 - 1817795
Alignment:
Q  569 aaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  1817846 aaaattaattgatgattt-gtagttggaattatgtgaagtatttttgatgatg 1817795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 13803022 - 13803069
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  13803022 ttaattgatgattt-gtagttggacttatgtgaagcattgttgatgatg 13803069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 15998942 - 15998878
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||| |||||||||||||||||  |  ||||||| ||||| |||||| |||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaac 15998878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 25601453 - 25601537
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttgg 459  Q
    |||||||| |||||| | ||||||||||||||| || |||||| |||||| || || |||||| ||| |||||||| || |||||    
T  25601453 aagagtaggtaatccaaagaattaaggtaataattgatgttcatgttgtataataatcataggaagaattttctataaaatttgg 25601537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 18459366 - 18459296
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct-aaaaaagggtttaa 307  Q
    ||||||||||||||||||||||||||||| | || |||| ||| | | ||||||||| ||||||||||||||    
T  18459366 aaccaatctaaggtaagggtgggactaacctactttaatcatgag-tatatgattctgaaaaaagggtttaa 18459296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 24267906 - 24267871
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24267906 caatcaaaggtaagggtgggactaactttctctaat 24267871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 7828024 - 7827994
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaat 7827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 18585867 - 18585809
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| |||| || ||||||||||||||||||||||||||||  |  |||||||||||||    
T  18585867 tcaatcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattct 18585809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 18928737 - 18928703
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||| ||||||||||||||||||    
T  18928737 aatctaaggtaagggtaggactaactttctctaat 18928703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 23150287 - 23150317
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaat 23150317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 23658224 - 23658190
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgaga 193  Q
    |||||||||| ||||||||||||||||||||||||    
T  23658224 aaactgcttttgggagaaaaagggagaaagtgaga 23658190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 34964133 - 34964099
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgaga 193  Q
    |||||||||| ||||||||||||||||||||||||    
T  34964133 aaactgcttttgggagaaaaagggagaaagtgaga 34964099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 22557422 - 22557358
Alignment:
Q  122 aaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 187  Q
    ||||||||||||||||||||||| | | ||||||| ||||| | ||| ||||| ||||||||||||    
T  22557422 aaaagagaggttaggaatagagaaatagaatacgtggaaacagtttttgggag-aaaagggagaaa 22557358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 13765236 - 13765172
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  13765236 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 13765172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 19655192 - 19655261
Alignment:
Q  204 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| ||||||||||||| |||||||||||||||||    
T  19655192 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 19655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 23956752 - 23956688
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  23956752 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 23956688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 27125438 - 27125507
Alignment:
Q  204 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| ||||||||||||| |||||||||||||||||    
T  27125438 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 27125507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 31021884 - 31021948
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||||| || |||||||  ||||| ||||||| |||||  ||||||| |||||||    
T  31021884 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 31021948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 478
Target Start/End: Complemental strand, 35057430 - 35057366
Alignment:
Q  414 ttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||| || | || ||  ||||||||||||| ||||| |||||||| |||||||||    
T  35057430 ttcaggttgtagaataatcttaagttaagttttctatcaaatttgggatttgggtagatgaaatt 35057366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 78; Significance: 5e-36; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 66206 - 66330
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||| ||||| ||||| ||||||||    
T  66206 aagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagag-tttctatcaaatttgggatttgagttgatga 66304  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| | |||||||||||||||||    
T  66305 aattggggattttggagtgaaaactg 66330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 73209 - 73075
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| |||| |||| ||||| | ||||||| |||||||| | |||  || | ||| ||||||||||||||||||||||||||||||    
T  73209 aaaagggagaaagtgagaagtcaaagaaagagaagaggagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaa 73110  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||| |||||||||||||||||| ||||||||||    
T  73109 taatgagttgtatgattctaaaaaggggtttaaca 73075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 76059 - 75925
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||| ||||||||||||| ||||||||| ||||| |  || ||| |||||||| | |||  || | ||||||||||||||||||||||| ||||||| ||    
T  76059 aaaatggagaaagtgagaagtcagagaaagagaagagaagtaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactagctttctccaa 75960  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||||||| ||||||||||    
T  75959 taatgggttgtatgattctaaaaaggggtttaaca 75925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 111416 - 111348
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  111416 aatctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 111348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 66000 - 66136
Alignment:
Q  173 agaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctc 271  Q
    ||||||||||||||||||||| |||| |||| ||||| |  |||||| || ||||| ||| | ||| | | |||||||||||||||||||||  |||||     
T  66000 agaaaaagggagaaagtgagaagtcatagaaagagaagagcagcaagctt-tagagtccggaatcatctattctaaggtaagggtgggactagatttctt 66098  T
Q  272 taataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  66099 taataatgggttgtataattctgaaaaagggtttaaca 66136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 328287 - 328318
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  328287 ctaaggtaagggtgggactaactttctctaat 328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 15547 - 15678
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  15547 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactaactt-ctctaa 15644  T
Q  275 taatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||| |||||||||||||||||||||||||||    
T  15645 taatggtttgtatgattctaaaaaagggtttaac 15678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 127273 - 127407
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    ||||| |||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  127273 aaaagagagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 127372  T
Q  275 taatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||| ||||||||||||||||| ||||||||||    
T  127373 taatggattgtatgattctaaaaaggggtttaaca 127407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 261 - 149
Alignment:
Q  163 tgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggact 262  Q
    |||||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||  |||||||| |||||||| |||| ||||||||||||||||||||    
T  261 tgcttttgggagaaaaatggagaaagtgagaagtcagtgaagagaagatgagcaaacttgtagagtccgaattcgaccattctaaggtaagggtgggact 162  T
Q  263 aactttctctaat 275  Q
    ||| |||| ||||    
T  161 aaccttctttaat 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 3353 - 3485
Alignment:
Q  176 aaaagggagaaagtgagaggtcagaga-agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||| | || ||||| | |||| | ||||||| || ||||| ||||| ||| | ||||||||||||||||||||||| ||||||||||    
T  3353 aaaagggagaaagtgaaaagttagagacaaagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactagctttctctaa 3451  T
Q  275 taatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||| ||||||||||||| ||||||||||||||    
T  3452 taatgcgttgtatgattctgaaaaagggtttaac 3485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 69980 - 70105
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||| |||||||||  ||| || ||  ||||||| ||||||||||  |||||| |||||| ||||||| ||||| ||||||||||||||    
T  69980 aagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaatttgggatttgggttgatga 70079  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  70080 aattggggcttttggagtgaaaactg 70105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 69852 - 69883
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  69852 ctaaggtaagggtgggactaactttctctaat 69883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 375 - 474
Target Start/End: Complemental strand, 2165 - 2066
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||| ||||||||||| ||||| |||||  |||||||    
T  2165 aagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagatttttctatcaaatttgggatttgaattgatga 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 2306 - 2235
Alignment:
Q  238 accaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||    
T  2306 accaatctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaaca 2235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 176 - 298
Target Start/End: Complemental strand, 8966 - 8843
Alignment:
Q  176 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 274  Q
    |||||||||||||||||| ||||||||| ||| ||| ||||||| |||||||| | ||| ||| | |||||||| |||||||||||||| |||| |||||    
T  8966 aaaagggagaaagtgagaagtcagagaaagaggaaaggagcaagcttgtagagtctgaaatcatctaatctaagttaagggtgggactagctttatctaa 8867  T
Q  275 taatgggttgtatgattctaaaaa 298  Q
    |||||| |||||||||||| ||||    
T  8866 taatggattgtatgattctgaaaa 8843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 8766 - 8673
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||| |||  || |||||||||||||||||||||| ||||| ||||||||    
T  8766 aagagtaggtaatcagatgaattaaggtaataattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatttgggatttgggt 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 58; Significance: 4e-24; HSPs: 4)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 21022 - 20897
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  21022 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 20923  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  20922 aattggggcttttggagtgaaaactg 20897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 422 - 500
Target Start/End: Complemental strand, 33990 - 33913
Alignment:
Q  422 gtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    |||||| || ||||||| |||||| ||| ||| ||||  |||||||||||||||||||| |||||||||||||||||||    
T  33990 gtagaataaacataggttgagtttccta-caaatttgagatttgggttgatgaaattggggcttttggagtgaaaactg 33913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 21150 - 21119
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  21150 ctaaggtaagggtgggactaactttctctaat 21119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 34165 - 34134
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  34165 ctaaggtaagggtgggactaactttctctaat 34134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 40164 - 40095
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40164 caatctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaaca 40095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 21904 - 22029
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || || |||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  21904 aagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 22003  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||| ||||||||||||    
T  22004 aattggggctttttgagtgaaaactg 22029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 6437 - 6569
Alignment:
Q  178 aagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaata 276  Q
    ||||||| |||||||| ||||||||| ||| | |  |||||| |||||||| | ||| ||| | |||||||||||| || ||||||| ||||||||||||    
T  6437 aagggagcaagtgagaagtcagagaaagaggagagaagcaagcttgtagagtctgaaatcatctaatctaaggtaaaggcgggactacctttctctaata 6536  T
Q  277 atgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||||| |||| ||||||||||    
T  6537 atgggttgtatgattctgaaaaggggtttaaca 6569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 375 - 468
Target Start/End: Original strand, 6631 - 6724
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggt 468  Q
    |||||||| ||||  |||||||||||||||||| | ||||||| ||||||||  || |||| ||||||||||||||||| ||||| ||||||||    
T  6631 aagagtaggtaattagatgaattaaggtaataattcgtgttcatgttgtagagtaatcataagtagagttttctatcaaatttgggatttgggt 6724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 2937 - 2870
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2937 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 478
Target Start/End: Complemental strand, 2739 - 2636
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||| |||||||||||||||||| |||||||||| |||| ||| || |||| ||  ||||| ||||||| ||||| ||||| || |||||    
T  2739 aagagtaggtaatctgatgaattaaggtaataattggtgttcagattgttgaataatcatacgttaagtttcctatcaaatttgggatttgagtagatga 2640  T
Q  475 aatt 478  Q
    ||||    
T  2639 aatt 2636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 56; Significance: 7e-23; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 375 - 478
Target Start/End: Complemental strand, 21465 - 21362
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||||||||| || ||||| |  ||||||||||||| ||||| ||||||||  ||||    
T  21465 aagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggatttgggtatatga 21366  T
Q  475 aatt 478  Q
    ||||    
T  21365 aatt 21362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 21668 - 21616
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattc 292  Q
    |||||||||||||||||||||||| |||||||||||  |  ||||||||||||    
T  21668 caatctaaggtaagggtgggactagctttctctaattctaagttgtatgattc 21616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 29568 - 29603
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29568 caatctaaggtaagggtgggactaactttctataat 29603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 375 - 478
Target Start/End: Complemental strand, 22047 - 21944
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| ||||| ||||||||||||||| || ||||||||||||||||||| || |||||||  ||||| ||||||| ||||| |||||||| |||||    
T  22047 aagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatga 21948  T
Q  475 aatt 478  Q
    ||||    
T  21947 aatt 21944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 19426 - 19308
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaactgctttcgggagaaaaagggagaaagt 189  Q
    |||||||||  |||||||||||||||||||||||||| ||||||| ||   |||  | | |||||||||||||| |||| ||||||||||||||||||||    
T  19426 ttggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcagaatagagaatacgtagaaactacttttgggagaaaaagggagaaagt 19327  T
Q  190 gagaggtcagagaagagaa 208  Q
    |||| |||| |||||||||    
T  19326 gagaagtcatagaagagaa 19308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 19263 - 19196
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||| |||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  19263 aatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 19196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 54; Significance: 1e-21; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 1862 - 1737
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||| | ||||||||||||||    
T  1862 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattttggatttgggttgatga 1763  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  1762 aattggggcttttggagtgaaaactg 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 5044 - 5091
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgatt 291  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||    
T  5044 ctaaggtaagggtgggactaactttctctaattctaagttgtatgatt 5091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 10754 - 10801
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgatt 291  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||    
T  10754 ctaaggtaagggtgggactaactttctctaattctaagttgtatgatt 10801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 29343 - 29468
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||| ||||||||||||||    
T  29343 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatga 29442  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||| ||||||    
T  29443 aattggggcttttggagtgcaaactg 29468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 2077 - 2009
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2077 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 2009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 53; Significance: 4e-21; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 19912 - 19844
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  19912 aatctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaaca 19844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 162 - 306
Target Start/End: Complemental strand, 5588 - 5445
Alignment:
Q  162 ctgctttcgggagaaaaagggagaaa-gtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtggg 259  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||| ||||| | ||||||  | |||||| || |  ||| | |||||||||||||||||||    
T  5588 ctgcttttgggagaaaa-gggagaaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccaa--tcatctaatctaaggtaagggtggg 5492  T
Q  260 actaactttctctaataatgggttgtatgattctaaaaaagggttta 306  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||||||    
T  5491 actacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 11668 - 11604
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||| ||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||    
T  11668 taagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaaca 11604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 186191 - 186259
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  186191 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 186259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 14005 - 13938
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||||    
T  14005 aatctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaac 13938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 20007 - 19976
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  20007 ctaaggtaagggtgggactaactttctctaat 19976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 14084 - 14052
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtga 191  Q
    |||||||||| ||||||||||||||||||||||    
T  14084 aaactgcttttgggagaaaaagggagaaagtga 14052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 18482 - 18395
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||    
T  18482 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaagtggggcttttggagtgaaaactg 18395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 185 - 307
Target Start/End: Original strand, 14526 - 14648
Alignment:
Q  185 aaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggtt 283  Q
    ||||||||| |||| |||| ||||| | ||||||| || ||||| ||| | ||| | ||||||||||||||||| ||||| |||||||||||||||||||    
T  14526 aaagtgagaagtcaaagaaagagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggtt 14624  T
Q  284 gtatgattctaaaaaagggtttaa 307  Q
    |||| ||||| |||||||||||||    
T  14625 gtataattctgaaaaagggtttaa 14648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 185 - 307
Target Start/End: Original strand, 23584 - 23706
Alignment:
Q  185 aaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggtt 283  Q
    ||||||||| |||| |||| ||||| | ||||||| || ||||| ||| | ||| | ||||||||||||||||| ||||| |||||||||||||||||||    
T  23584 aaagtgagaagtcaaagaaagagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggtt 23682  T
Q  284 gtatgattctaaaaaagggtttaa 307  Q
    |||| ||||| |||||||||||||    
T  23683 gtataattctgaaaaagggtttaa 23706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 14751 - 14814
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    ||||||||||||||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  14751 gttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 23809 - 23872
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    ||||||||||||||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  23809 gttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 19165 - 19099
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 157  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19165 ttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacataatacgta 19099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 8885 - 8760
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||||| |||||| ||||||| ||||  ||||| ||||||||    
T  8885 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatga 8786  T
Q  475 aattggtgcttttggagtgaaaactg 500  Q
    |||||| |||||||||||||||||||    
T  8785 aattggggcttttggagtgaaaactg 8760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 9013 - 8982
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  9013 ctaaggtaagggtgggactaactttctctaat 8982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 11160 - 11221
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 306  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  11160 taaggtaaggatgggactagctttctctaataatgggttgtatgattctaaaaaggggttta 11221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 16409 - 16482
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||| |||||||||||||||||| || ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  16409 tcaatcaatctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaac 16482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 18691 - 18762
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 306  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  18691 tcaaccaatctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggttta 18762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 585 - 620
Target Start/End: Original strand, 83234 - 83269
Alignment:
Q  585 tttgtagttagaattatgtgaagcattgttgatgat 620  Q
    ||||||||| ||||||||||||||||||||||||||    
T  83234 tttgtagttggaattatgtgaagcattgttgatgat 83269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 77 - 309
Target Start/End: Complemental strand, 11180 - 10936
Alignment:
Q  77 gctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagag-agacataatacgtagaaactgctttcgggaga 175  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||||| ||||||| ||   || | | | |||||||||||||||||||  |||||    
T  11180 gctgaggggcagaataggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcagaatagagaatacgtagaaactgctttttggaga 11081  T
Q  176 aaaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggac 261  Q
    |||||||||||| ||  | | |||||||||||| |||             ||||||  |||||||  | ||  ||| | ||| |||||||||||||| ||    
T  11080 aaaagggagaaaatggtaagccagagaagagaagaatcttgtgagaagaggagcaatcttgtagaatctga--tcatctaatataaggtaagggtggaac 10983  T
Q  262 taactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||    
T  10982 tagctttctctaataatgggttgtatgattct-aaaaagggtttaaca 10936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 8344 - 8286
Alignment:
Q  77 gctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttag 135  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||||| |||||||    
T  8344 gctgaggggcagaataggaataagggagaatgtgttaggtttataaaaagaaaggttag 8286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 15536 - 15478
Alignment:
Q  77 gctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttag 135  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||||| |||||||    
T  15536 gctgaggggcagaataggaataagggagaatgtgttaggtttataaaaagaaaggttag 15478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 150 - 309
Target Start/End: Original strand, 5520 - 5678
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaag 248  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| |||| ||||||||| | | | ||| |||||||     | |||||| |||||||||    
T  5520 aatacgtagaaacgacttttgggagaaaaatggagaaagtgagaagtcacagaagagaagaagggaaagcttgtagaatttaggattcaatcaatctaag 5619  T
Q  249 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||||||| | ||||||||||||||||| ||| ||||| ||| ||| |||||||    
T  5620 gtaagggtgggactagc-ttctctaataatgggtt-tataattctgaaataggatttaaca 5678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 18328 - 18264
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  18328 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaac 18264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 18469 - 18415
Alignment:
Q  102 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 157  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  18469 gagaatatgttaggtttataaaa-gagaggttaggaatagagaaacataatacgta 18415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 67178 - 67143
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||| ||||||||||||||||||||||    
T  67178 caatctaaggtaaaggtgggactaactttctctaat 67143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 304
Target Start/End: Original strand, 8742 - 8805
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtt 304  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||    
T  8742 aatctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggtt 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 42560 - 42473
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || | ||||| |||||| ||||||| |||||||||| | ||||||||||||| |||||||||||||||||||    
T  42560 gttcaggctgtagaataaacctaggttgagtttcctatcaaatttggaattttgtttgatgaaattggggcttttggagtgaaaactg 42473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 5685 - 5620
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattct--aaaaaagggtttaac 308  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||    
T  5685 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaac 5620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 495
Target Start/End: Complemental strand, 32031 - 31950
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaa 495  Q
    ||||||| ||||||| ||| |||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  32031 gttcaggctgtagaataac-ataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaa 31950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 423 - 500
Target Start/End: Complemental strand, 4913 - 4836
Alignment:
Q  423 tagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||| || ||||||| |||||| || |||| ||||||||| |||||||||||||||| |||||||||||||||||||    
T  4913 tagaataaacataggttgagtttcctttcaaatttggaattagggttgatgaaattggggcttttggagtgaaaactg 4836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 5082 - 5051
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaat 5051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 9027 - 8962
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    |||||||||  |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  9027 ttggaataagggagaatatgtgaggtttataaaaagagaggttaggaatagagaaacataatacgt 8962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 423 - 500
Target Start/End: Complemental strand, 4913 - 4836
Alignment:
Q  423 tagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||| || ||||||| |||||| || |||| ||||||||| |||||||||||||||| |||||||||||||||||||    
T  4913 tagaataaacataggttgagtttcctttcaaatttggaattagggttgatgaaattggggcttttggagtgaaaactg 4836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 5082 - 5051
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaat 5051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 33649 - 33565
Alignment:
Q  102 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 187  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||  |||| | ||| ||||| ||||||||||||    
T  33649 gagaatatgttaggtttataaaaagagaggttaggaatagagaaacaaaatacgtgaaaacagattttgggag-aaaagggagaaa 33565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 33516 - 33476
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  33516 tcaatcaatctaaggtaagggtgggactaaccttctttaat 33476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 17516 - 17584
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||| |||||| |||| ||||||||||| |||||| ||||| ||||||||||||||    
T  17516 caatctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaac 17584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 23754 - 23710
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 203  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||    
T  23754 aaacggcttttgggagaaaaagggagaaagtgagaagtcagagaa 23710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 8477 - 8531
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  8477 agcaaaattaattgatgattt-gtagttggaattatgtgaagcattgttgatgatg 8531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 7506 - 7575
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    ||||||||||||||||||||||||||||| |||| |||| ||| | | ||||||||| |||||||||||||    
T  7506 aaccaatctaaggtaagggtgggactaaccttctttaattatgag-tatatgattctgaaaaagggtttaa 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 19463 - 19550
Alignment:
Q  413 gttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaattggtgcttttggagtgaaaactg 500  Q
    ||||||| ||||||| || |||| || |||||| ||||||| ||||| || || |||||||||||||| |||||||||||||||||||    
T  19463 gttcaggctgtagaataaacataagttgagtttcctatcaaatttgggatatgagttgatgaaattggggcttttggagtgaaaactg 19550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 1128 - 1065
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||| ||||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaac 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 40051 - 40106
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaaga 205  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  40051 aatatgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaga 40106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 23587 - 23527
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtt 304  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | |||||||| |||||    
T  23587 ctaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggtt 23527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 40153 - 40226
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggt-tgt-atgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| || | | || ||||||||||||||||||||    
T  40153 aaccaatctaaggtaagggtgggactaaccttctctaatcatgagtatataataattctaaaaaagggtttaac 40226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 2454 - 2508
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 299  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaa 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 497
Target Start/End: Complemental strand, 11148 - 11026
Alignment:
Q  375 aagagtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatga 474  Q
    |||||||| |||| | |||||||||  ||| || ||  ||||||| ||||||| || ||||  | |||||| ||||||| ||||| |||| |||||||||    
T  11148 aagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatatcttgagtttcctatcaaatttgggattttggttgatga 11049  T
Q  475 aattggtgcttttggagtgaaaa 497  Q
    |||||| ||||||||||||||||    
T  11048 aattggggcttttggagtgaaaa 11026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 9785 - 9839
Alignment:
Q  102 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  9785 gagaatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgt 9839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 26789 - 26716
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||| ||||||| ||||||||||||| ||||||||||||||  | |||||||| ||||| ||||||||||||||    
T  26789 tcaatcaatctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaac 26716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 23814 - 23754
Alignment:
Q  85 gcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag 145  Q
    |||||||||||||||  |||||||||||||||| | || | ||||||||||||||||||||    
T  23814 gcaaaattggaataagggagaatgtgttaggttaagaataggagaggttaggaatagagag 23754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 23730 - 23604
Alignment:
Q  181 ggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaa-ttcaaccaatctaaggtaagggtgggactaactttctctaataatg 279  Q
    ||||||||||||| |||||||| ||||| | | | ||| |||||||  || || ||  ||||||||||||||||||||||||| || |||| |||| |||    
T  23730 ggagaaagtgagaagtcagagatgagaagaagggaaagcttgtagaatccaaaatttgaccaatctaaggtaagggtgggactgaccttctttaatcatg 23631  T
Q  280 ggttgtatgattctaaaaaagggtttaa 307  Q
     | | ||| |||||||||||||||||||    
T  23630 ag-tatataattctaaaaaagggtttaa 23604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 5304 - 5368
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaac 5368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 5102 - 5160
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||    
T  5102 aatacgtagaaacaacttttgggagaaaaatggagaaagtgagaagtcagagaagagaa 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 1971 - 2031
Alignment:
Q  378 agtagctaatccgatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggt 438  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||| || |||||||    
T  1971 agtagataatctgatgaattaaggtaataagtggtgttcatgttgtagaataatcataggt 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 96458 - 96386
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    ||||||||||| |||| ||||||||||||||||||||||  || ||||||||||||| |||| || |||||||    
T  96458 aaccaatctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaaca 96386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 183 - 270
Alignment:
Q  91 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 178  Q
    |||||||||  || ||| |||| ||||||||||||||||||||||||||||||| ||| |||||||  |||| || || |||||||||    
T  183 ttggaataagggataatatgtttggtttataaaaagagaggttaggaatagagaaacagaatacgtgaaaacagcgtttgggagaaaa 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 4988 - 4926
Alignment:
Q  245 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||| |||||||||||||| |||||||| |||||  |||||||||||||    
T  4988 taaggtaagggtgggactagctttctctaataat-ggttgtataattctgtaaaagggtttaac 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 17936 - 18003
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    |||||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||| ||||||    
T  17936 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaac 18003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 2094 - 2152
Alignment:
Q  150 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||    
T  2094 aatacgtagaaacaacttttgggagaaaaatggagaaagtgagaagtcagagaagagaa 2152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 2199 - 2263
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||| ||||||||||  |  ||||||| ||||| ||||||||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaac 2263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 4615 - 4562
Alignment:
Q  103 agaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 156  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  4615 agaatatgttaggtttttaaaaagagaggttaggaatagagaaacagaatacgt 4562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 3402 - 3226
Alignment:
Q  89 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaag 188  Q
    |||||||||||  |||||||||||||||| | || | |||||||||||||||||||| || || ||||| |||| | |||           || | ||||    
T  3402 aattggaataagggagaatgtgttaggttaagaatatgagaggttaggaatagagagtcagaacacgtaaaaacagtttt-----------ggaaaaaag 3314  T
Q  189 tgagaggtcagagaagagaaaatgagcaagtttgtag-agcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| |||||||||||||| | | | ||| |||||| |  | ||||| ||||||||||||||||||||||||||||| |||| ||||    
T  3313 tgagaagtcagagaagagaagaagggaaagcttgtagaattcagaatttaaccaatctaaggtaagggtgggactaaccttctttaat 3226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 18636 - 18681
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaataatgggttgta 286  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  18636 aatctaaggtaagggtgggactagctttctctaataatgagttgta 18681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 46003 - 46055
Alignment:
Q  154 cgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagag 206  Q
    |||| |||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  46003 cgtacaaactgcttttgggagataaagggagaaagtgagaagtcagagaagag 46055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 2949 - 2893
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||||||||||||||||||||||| ||||||||||||||  | |||||||| |||||    
T  2949 aaccaatctaaggtaagggtgggattaactttctctaattttaggttgtataattct 2893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 6480 - 6408
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    |||| |||||||||||||||||  ||||| ||||||||||||||| ||||| | ||||| |||||||| ||||    
T  6480 tcaatcaatctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaa 6408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 307
Target Start/End: Original strand, 38381 - 38503
Alignment:
Q  185 aaagtgagaggtcagagaagagaa-aatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggt 282  Q
    ||||||||| |||||||||||||| |||| | ||| |||||||  || ||||| ||||||||||||||||||||| ||||||| |||| |||| ||| |     
T  38381 aaagtgagaagtcagagaagagaagaatg-gaaagcttgtagaatccagaatttaaccaatctaaggtaagggtgtgactaaccttctttaatcatgag- 38478  T
Q  283 tgtatgattctaaaaaagggtttaa 307  Q
    | ||| ||||| |||||||||||||    
T  38479 tatataattctgaaaaagggtttaa 38503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 195 - 160
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  195 caatctaaggtaagggtgggactaactttctctaat 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 4704 - 4739
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  4704 caatctaaggtaagggtgggactaactttctctaat 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 13387 - 13422
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  13387 caatctaaggtaagggtgggactaactttctctaat 13422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000006; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 60797 - 60851
Alignment:
Q  566 agcaaaattaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  60797 agcaaagttaattgatgattt-gtagttggaattatgtgaagcattattgatgatg 60851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 59648 - 59718
Alignment:
Q  237 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 308  Q
    ||||||||||||||||||||||| ||||| |||| |||| ||| | | ||| ||||| ||||||||||||||    
T  59648 aaccaatctaaggtaagggtgggtctaaccttctttaatcatgag-tatataattctgaaaaagggtttaac 59718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 39975 - 40041
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| |||||||  |||| |||||||| |||||||||    
T  39975 tgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagatgaaatt 40041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 59511 - 59567
Alignment:
Q  89 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag 145  Q
    |||||||||||  |||||||||||||||| | || | ||||||| ||||||||||||    
T  59511 aattggaataagggagaatgtgttaggttaagaataggagaggtgaggaatagagag 59567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 12630 - 12580
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaa 209  Q
    |||||||||| |||||| |||||| |||||||||| |||||||||||||||    
T  12630 aaactgcttttgggagataaagggcgaaagtgagaagtcagagaagagaaa 12580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 426 - 373
Alignment:
Q  256 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 309  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  426 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 1937 - 2012
Alignment:
Q  231 gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 307  Q
    ||||| |||||||||||||||| |||||||||||| |||| |||| ||| | | ||| ||||| |||||||||||||    
T  1937 gaatttaaccaatctaaggtaacggtgggactaaccttctttaatcatgag-tctataattctgaaaaagggtttaa 2012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 1819 - 1899
Alignment:
Q  126 gagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    ||||||||| |||||||||| || || ||||| |||| | ||| ||||||||||   ||||||||||| ||||||||||||||    
T  1819 gagaggttaagaatagagagtcagaacacgtaaaaacagtttttgggagaaaaaa--agaaagtgagaagtcagagaagagaa 1899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 19815 - 19775
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  19815 tcaaccaatctaaggtaagggtgagactgactttctctaat 19775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 6284 - 6328
Alignment:
Q  109 tgttaggtttataaaaagagaggttaggaatagagagacataata 153  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  6284 tgttaggcttataaaaagagaggttaggaatagagaaacagaata 6328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 24486 - 24439
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  24486 ttaattgatgattta-tagttggaattatgtgaagcattgttgatgatg 24439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 33612 - 33659
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagag 206  Q
    ||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  33612 aaactgcttttaggagataaagggagaaagtgagaagtcagagaagag 33659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 360 - 407
Alignment:
Q  573 ttaattgatgattttgtagttagaattatgtgaagcattgttgatgatg 621  Q
    |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  360 ttaattgatgattt-gtagttggacttatgtgaagcattgttaatgatg 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 49791 - 49751
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  49791 tcaaccaatctaaggtaagggtgggactaaccttctttaat 49751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 106046 - 106098
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattc 292  Q
    |||||||||||||||||| |||||||||||||||||  |  ||||||||||||    
T  106046 caatctaaggtaagggtgtgactaactttctctaattctaagttgtatgattc 106098  T

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Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 478
Target Start/End: Original strand, 106303 - 106391
Alignment:
Q  390 gatgaattaaggtaataagtggtgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||||| |  ||||||||||||| || || | |||||  ||||| ||||||| ||||| | || ||| |||||||||    
T  106303 gatgaattaaggtaataattattgttcaggttgtaaaataatcgtaggttaagtttcctatcaaatttgggagttcggtagatgaaatt 106391  T

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Target: scaffold1434 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 1348 - 1414
Alignment:
Q  234 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagg 301  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||| |||||||    
T  1348 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctgaaaaagg 1414  T

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Target: scaffold0628 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 1054 - 1085
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctct 272  Q
    ||||||||||||||||||||||||||||||||    
T  1054 aatctaaggtaagggtgggactaactttctct 1085  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 575 - 540
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  575 caatctaaggtaagggtgagactaactttctctaat 540  T

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Target: scaffold0241 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 3239 - 3204
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3239 caatctaaggtaagggttggactaactttctctaat 3204  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 35547 - 35512
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  35547 caatctaaggtaagggtgagactaactttctctaat 35512  T

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Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 26624 - 26687
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 298  Q
    ||||||||||||| |||||||||||| ||||||||| ||||  | |||||||| ||||| ||||    
T  26624 tcaaccaatctaaagtaagggtgggattaactttctttaattttaggttgtataattctgaaaa 26687  T

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Target: scaffold0077 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 34421 - 34361
Alignment:
Q  213 agcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||| ||||||||| ||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  34421 agcaattttgtagagtccga--tcatctaatttaaggtaagggtgggactaactttctctaat 34361  T

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Target: scaffold0071 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 15325 - 15294
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  15325 ctaaggtaagggtgggactaactttctctaat 15294  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 112961 - 112996
Alignment:
Q  240 caatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||| ||||||||||||||||||||||||||    
T  112961 caatctaagataagggtgggactaactttctctaat 112996  T

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Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 117806 - 117837
Alignment:
Q  244 ctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||||||||||||||||||    
T  117806 ctaaggtaagggtgggactaactttctctaat 117837  T

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Target: scaffold1633 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 1257 - 1227
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  1257 taaggtaagggtgggactaactttctctaat 1227  T

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Target: scaffold1283 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 468 - 498
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  468 taaggtaagggtgggactaactttctctaat 498  T

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Target: scaffold0956 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 2611 - 2577
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    |||||| ||||||||||||||||||||||||||||    
T  2611 aatctacggtaagggtgggactaactttctctaat 2577  T

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Target: scaffold0601 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 196 - 226
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaat 226  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 6675 - 6733
Alignment:
Q  235 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 293  Q
    |||| |||| || ||||||||||||||||||||||||||||  |  |||||||||||||    
T  6675 tcaatcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattct 6733  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 9984 - 9918
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaatt 478  Q
    |||||||||||||||| || |||||||  ||||| |||||||  |||| |||||||| |||||||||    
T  9984 tgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagatgaaatt 9918  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 58798 - 58768
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  58798 taaggtaagggtgggactaactttctctaat 58768  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 78185 - 78215
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  78185 taaggtaagggtgggactaactttctctaat 78215  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 61844 - 61878
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||| |||||||||||||||||    
T  61844 aatctaaggtaagggtgagactaactttctctaat 61878  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 16649 - 16683
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgaga 193  Q
    |||||||||| ||||||||||||||||||||||||    
T  16649 aaactgcttttgggagaaaaagggagaaagtgaga 16683  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 24131 - 24161
Alignment:
Q  245 taaggtaagggtgggactaactttctctaat 275  Q
    |||||||||||||||||||||||||||||||    
T  24131 taaggtaagggtgggactaactttctctaat 24161  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 77743 - 77709
Alignment:
Q  241 aatctaaggtaagggtgggactaactttctctaat 275  Q
    ||||||||||||||||| |||||||||||||||||    
T  77743 aatctaaggtaagggtgagactaactttctctaat 77709  T

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Target: scaffold0716 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 5631 - 5590
Alignment:
Q  159 aaactgctttcgggagaaaaagggagaaagtgagaggtcaga 200  Q
    |||||||||| |||||||||||||||||||| ||| ||||||    
T  5631 aaactgcttttgggagaaaaagggagaaagtaagaagtcaga 5590  T

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Target: scaffold0546 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 8058 - 8021
Alignment:
Q  171 ggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    ||||||||||||||||||||||| || |||||||||||    
T  8058 ggagaaaaagggagaaagtgagaagtaagagaagagaa 8021  T

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Target: scaffold0109 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 5249 - 5286
Alignment:
Q  171 ggagaaaaagggagaaagtgagaggtcagagaagagaa 208  Q
    ||||||||||||||||||||||| || |||||||||||    
T  5249 ggagaaaaagggagaaagtgagaagtaagagaagagaa 5286  T

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Target: scaffold1276 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 1029 - 965
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||||| | || |||||||  ||||| ||||||| ||||| |||||||||| |||||    
T  1029 tgttcaggttgtaggataatcataggttaagtttcctatcaaatttgggatttgggttggtgaaa 965  T

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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 3853 - 3789
Alignment:
Q  412 tgttcaggttgtagaaaaaccataggtagagttttctatcaattttggaatttgggttgatgaaa 476  Q
    |||||||||||| ||| || ||||||| |||||| ||||||| |||||  ||||||| |||||||    
T  3853 tgttcaggttgttgaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 3789  T

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