View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13307_high_13 (Length: 267)

Name: NF13307_high_13
Description: NF13307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13307_high_13
NF13307_high_13
[»] chr2 (23 HSPs)
chr2 (31-258)||(45235330-45235556)
chr2 (31-75)||(7494975-7495019)
chr2 (31-75)||(9458401-9458445)
chr2 (31-75)||(14523508-14523552)
chr2 (31-75)||(16463620-16463664)
chr2 (31-75)||(25637413-25637457)
chr2 (31-75)||(34120573-34120617)
chr2 (31-75)||(34120657-34120701)
chr2 (34-76)||(34451471-34451513)
chr2 (34-75)||(39785518-39785559)
chr2 (31-75)||(3323408-3323452)
chr2 (31-71)||(5272274-5272314)
chr2 (31-75)||(5789783-5789827)
chr2 (31-75)||(11742665-11742709)
chr2 (31-75)||(17695261-17695305)
chr2 (31-75)||(35313820-35313864)
chr2 (31-75)||(36354578-36354622)
chr2 (31-75)||(36794217-36794261)
chr2 (31-71)||(43410363-43410403)
chr2 (32-70)||(8928547-8928585)
chr2 (35-75)||(7491088-7491128)
chr2 (31-71)||(19444083-19444123)
chr2 (31-75)||(37322362-37322406)
[»] chr4 (33 HSPs)
chr4 (31-75)||(35380478-35380522)
chr4 (31-75)||(35311369-35311413)
chr4 (31-75)||(52859938-52859982)
chr4 (31-73)||(49746895-49746937)
chr4 (31-75)||(11907743-11907787)
chr4 (31-75)||(22129975-22130019)
chr4 (31-75)||(25233115-25233159)
chr4 (31-75)||(38405247-38405291)
chr4 (31-75)||(42617047-42617091)
chr4 (31-75)||(47773163-47773207)
chr4 (31-75)||(49176079-49176123)
chr4 (32-75)||(26147763-26147806)
chr4 (31-76)||(47359115-47359160)
chr4 (31-75)||(2066724-2066768)
chr4 (31-75)||(4972506-4972550)
chr4 (31-75)||(5841572-5841616)
chr4 (31-71)||(16821476-16821516)
chr4 (31-75)||(28501029-28501073)
chr4 (31-71)||(40122999-40123039)
chr4 (31-75)||(51624719-51624763)
chr4 (33-75)||(21240846-21240888)
chr4 (32-73)||(5618483-5618524)
chr4 (32-73)||(52868908-52868949)
chr4 (31-71)||(2653357-2653397)
chr4 (31-75)||(3098415-3098459)
chr4 (31-75)||(7061808-7061852)
chr4 (31-75)||(10754307-10754351)
chr4 (31-75)||(10968076-10968120)
chr4 (34-70)||(19265744-19265780)
chr4 (31-71)||(21698653-21698693)
chr4 (31-71)||(42517790-42517830)
chr4 (31-75)||(49428486-49428529)
chr4 (44-76)||(54921772-54921804)
[»] scaffold0003 (1 HSPs)
scaffold0003 (31-75)||(252941-252985)
[»] chr8 (30 HSPs)
chr8 (31-75)||(13335150-13335194)
chr8 (31-75)||(22771974-22772018)
chr8 (31-71)||(396750-396790)
chr8 (31-71)||(10180086-10180126)
chr8 (31-75)||(10953871-10953915)
chr8 (31-75)||(10961876-10961920)
chr8 (31-75)||(17719397-17719441)
chr8 (32-75)||(5053292-5053335)
chr8 (32-71)||(21216240-21216279)
chr8 (36-75)||(40996505-40996544)
chr8 (31-69)||(1875878-1875916)
chr8 (31-75)||(9300254-9300298)
chr8 (31-75)||(26626251-26626295)
chr8 (31-71)||(31231667-31231707)
chr8 (31-75)||(34948824-34948868)
chr8 (31-75)||(39482545-39482589)
chr8 (33-76)||(25285098-25285141)
chr8 (32-75)||(36007029-36007072)
chr8 (31-73)||(29226666-29226708)
chr8 (41-75)||(32476221-32476255)
chr8 (31-73)||(39405697-39405739)
chr8 (41-75)||(44761641-44761675)
chr8 (31-73)||(45425806-45425848)
chr8 (31-71)||(50753-50793)
chr8 (31-75)||(2767436-2767480)
chr8 (31-75)||(10098131-10098175)
chr8 (31-75)||(17823855-17823899)
chr8 (31-71)||(32678353-32678393)
chr8 (31-71)||(34394097-34394137)
chr8 (31-75)||(39466176-39466220)
[»] chr7 (30 HSPs)
chr7 (31-75)||(21390234-21390278)
chr7 (31-75)||(25571360-25571404)
chr7 (31-75)||(34947440-34947484)
chr7 (31-75)||(37245630-37245674)
chr7 (31-75)||(40076258-40076302)
chr7 (31-75)||(83324-83368)
chr7 (31-75)||(759236-759280)
chr7 (31-75)||(19271877-19271921)
chr7 (31-75)||(21350771-21350815)
chr7 (31-75)||(21760129-21760173)
chr7 (31-75)||(42935598-42935642)
chr7 (31-73)||(33819154-33819196)
chr7 (31-76)||(24166929-24166974)
chr7 (39-76)||(47045618-47045655)
chr7 (31-75)||(23670425-23670469)
chr7 (31-75)||(27920926-27920970)
chr7 (31-75)||(28103670-28103714)
chr7 (31-75)||(28202454-28202498)
chr7 (31-75)||(31930647-31930691)
chr7 (31-71)||(34100692-34100732)
chr7 (31-75)||(36790678-36790722)
chr7 (31-75)||(43873863-43873907)
chr7 (31-73)||(2459413-2459455)
chr7 (31-73)||(7457565-7457607)
chr7 (37-75)||(21760321-21760359)
chr7 (31-75)||(9785928-9785972)
chr7 (31-75)||(11373573-11373617)
chr7 (31-75)||(24516434-24516478)
chr7 (31-71)||(37490319-37490359)
chr7 (31-75)||(44424085-44424129)
[»] chr6 (25 HSPs)
chr6 (31-75)||(6801863-6801907)
chr6 (33-75)||(21010104-21010146)
chr6 (31-71)||(15058055-15058095)
chr6 (31-75)||(21478232-21478276)
chr6 (31-75)||(27367236-27367280)
chr6 (31-75)||(27457583-27457627)
chr6 (31-75)||(30716832-30716876)
chr6 (33-75)||(23142601-23142643)
chr6 (31-73)||(23397754-23397796)
chr6 (31-75)||(5302284-5302328)
chr6 (31-75)||(11656084-11656128)
chr6 (31-75)||(13207229-13207273)
chr6 (31-75)||(29363237-29363281)
chr6 (31-74)||(181491-181533)
chr6 (32-75)||(7920174-7920217)
chr6 (31-74)||(27367564-27367607)
chr6 (31-74)||(27457911-27457954)
chr6 (31-65)||(1956116-1956150)
chr6 (31-73)||(21425696-21425738)
chr6 (35-75)||(1781738-1781778)
chr6 (31-75)||(11143723-11143767)
chr6 (31-75)||(12307731-12307775)
chr6 (35-75)||(31283536-31283576)
chr6 (31-71)||(34299931-34299971)
chr6 (31-75)||(34657702-34657746)
[»] chr5 (17 HSPs)
chr5 (31-75)||(6315913-6315957)
chr5 (35-75)||(6753962-6754002)
chr5 (31-72)||(19929882-19929923)
chr5 (31-75)||(1248740-1248784)
chr5 (31-75)||(4818483-4818527)
chr5 (31-75)||(6616016-6616060)
chr5 (31-75)||(41496013-41496057)
chr5 (31-73)||(6753794-6753836)
chr5 (31-73)||(40530361-40530403)
chr5 (31-75)||(3348266-3348310)
chr5 (31-75)||(15818618-15818662)
chr5 (31-75)||(41062295-41062339)
chr5 (32-75)||(2588200-2588243)
chr5 (31-73)||(9515668-9515710)
chr5 (31-73)||(29374128-29374170)
chr5 (35-75)||(27580539-27580579)
chr5 (31-75)||(40899851-40899895)
[»] chr3 (30 HSPs)
chr3 (31-75)||(10366787-10366831)
chr3 (31-75)||(37497424-37497468)
chr3 (31-75)||(43254002-43254046)
chr3 (31-75)||(44301494-44301538)
chr3 (31-75)||(27471268-27471312)
chr3 (31-75)||(30710582-30710626)
chr3 (31-75)||(36476517-36476561)
chr3 (32-75)||(37773105-37773148)
chr3 (31-70)||(39043893-39043932)
chr3 (31-75)||(34957437-34957481)
chr3 (35-75)||(38795277-38795317)
chr3 (31-75)||(43715239-43715283)
chr3 (35-75)||(45710782-45710822)
chr3 (32-75)||(37804671-37804714)
chr3 (32-75)||(53560149-53560192)
chr3 (31-75)||(19822944-19822989)
chr3 (32-73)||(24569235-24569276)
chr3 (31-75)||(1778318-1778362)
chr3 (31-71)||(27549424-27549464)
chr3 (31-75)||(30190798-30190842)
chr3 (31-75)||(36460554-36460598)
chr3 (31-71)||(37311886-37311926)
chr3 (31-63)||(37695805-37695837)
chr3 (31-71)||(37741532-37741572)
chr3 (32-76)||(40462253-40462297)
chr3 (31-71)||(41038531-41038571)
chr3 (31-71)||(48541130-48541170)
chr3 (31-75)||(51065151-51065195)
chr3 (31-75)||(51838098-51838142)
chr3 (31-75)||(54726418-54726462)
[»] chr1 (33 HSPs)
chr1 (31-75)||(23169132-23169176)
chr1 (31-75)||(6785189-6785233)
chr1 (31-75)||(12039015-12039059)
chr1 (31-75)||(20209981-20210025)
chr1 (31-75)||(24991795-24991839)
chr1 (31-75)||(35367735-35367779)
chr1 (31-75)||(37506057-37506101)
chr1 (31-75)||(49224127-49224171)
chr1 (36-75)||(4659710-4659749)
chr1 (31-74)||(39864045-39864088)
chr1 (31-73)||(12151123-12151165)
chr1 (31-73)||(40144988-40145030)
chr1 (38-75)||(10495772-10495809)
chr1 (31-71)||(3312056-3312096)
chr1 (31-75)||(26256229-26256273)
chr1 (31-75)||(33733403-33733447)
chr1 (31-75)||(41121964-41122008)
chr1 (31-75)||(43500881-43500925)
chr1 (31-71)||(45331276-45331316)
chr1 (31-71)||(52429279-52429319)
chr1 (32-71)||(29074817-29074856)
chr1 (32-75)||(45775445-45775488)
chr1 (33-75)||(6160593-6160635)
chr1 (31-73)||(28748926-28748968)
chr1 (35-73)||(37275536-37275574)
chr1 (37-75)||(52837216-52837254)
chr1 (34-75)||(15699073-15699114)
chr1 (31-71)||(13579761-13579801)
chr1 (43-75)||(16395198-16395230)
chr1 (31-75)||(17988886-17988930)
chr1 (31-75)||(21910149-21910193)
chr1 (35-71)||(30437741-30437777)
chr1 (31-75)||(31042730-31042774)
[»] scaffold0328 (1 HSPs)
scaffold0328 (31-75)||(8120-8164)
[»] scaffold0159 (1 HSPs)
scaffold0159 (31-75)||(34156-34200)
[»] scaffold0110 (1 HSPs)
scaffold0110 (31-71)||(1493-1533)
[»] scaffold1809 (1 HSPs)
scaffold1809 (36-74)||(826-864)
[»] scaffold0095 (2 HSPs)
scaffold0095 (31-73)||(50139-50181)
scaffold0095 (31-75)||(22281-22325)
[»] scaffold0330 (1 HSPs)
scaffold0330 (31-75)||(5325-5369)
[»] scaffold0294 (1 HSPs)
scaffold0294 (35-75)||(16972-17012)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 31 - 258
Target Start/End: Complemental strand, 45235556 - 45235330
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgagatnnnnnnnnncaatgttaaagagacaaatattgtgagacgaaggaaacatcttct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||||||||||||||||||||||||    
T  45235556 taataaatgttgcattggtattataaagtgacaattattttgagatagaaaaaca-aattttaaagagacaaatattgtgagacgaaggaaacatcttct 45235458  T
Q  131 aattggtgaaatccatgcaggctcgactatattgggaataagtgtcaccttatagtcgaataagtgtcacctaaagtggtaggacctatatgaatttttc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45235457 aattggtgaaatccatgcaggctcgactatattgggaataagtgtcaccttatagtcgaataagtgtcacctaaagtggtaggacctatatgaatttttc 45235358  T
Q  231 gaagactattgcttttcccaccctatgc 258  Q
    ||||||||||||||||||||||||||||    
T  45235357 gaagactattgcttttcccaccctatgc 45235330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 7494975 - 7495019
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  7494975 taataaatgctgcattggtattctaaagtgacaattattttgaga 7495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 9458401 - 9458445
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  9458401 taataaatgctgcattggtattctaaagtgacaattattttgaga 9458445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 14523508 - 14523552
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  14523508 taataaatgttgcattgatattctaaagtgacaattattttgaga 14523552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 16463664 - 16463620
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  16463664 taataaatgctgcattggtattctaaagtgacaattattttgaga 16463620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 25637457 - 25637413
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  25637457 taataaatgctgcattggtattctaaagtgacaattattttgaga 25637413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 34120573 - 34120617
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  34120573 taataaatgctgcattggtattttaaagtgacaattattttgaga 34120617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 34120657 - 34120701
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  34120657 taataaatgctgcattggtattttaaagtgacaattattttgaga 34120701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 34451471 - 34451513
Alignment:
Q  34 taaatgttgcattggtattataaagtgacaattattttgagat 76  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  34451471 taaatgttgcattgatattctaaagtgacaattattttgagat 34451513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 39785559 - 39785518
Alignment:
Q  34 taaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  39785559 taaatgctgcattggtattctaaagtgacaattattttgaga 39785518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 3323408 - 3323452
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||    
T  3323408 taataaatgctgcattggtattgtaaagtgagaattattttgaga 3323452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 5272274 - 5272314
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  5272274 taataaatgttgcatttgtattctaaagtgacaattatttt 5272314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 5789783 - 5789827
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  5789783 taataaatgatgcattgatattgtaaagtgacaattattttgaga 5789827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 11742665 - 11742709
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||    
T  11742665 taataaatgtttcattcgtattctaaagtgacaattattttgaga 11742709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 17695305 - 17695261
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  17695305 taataaatgctgcattgatattctaaagtgacaattattttgaga 17695261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 35313864 - 35313820
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||    
T  35313864 taataaatgttgcattattattgtaaagtgacaattattttgaga 35313820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 36354578 - 36354622
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||    
T  36354578 taataaattctgcattggtattctaaagtgacaattattttgaga 36354622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 36794261 - 36794217
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||    
T  36794261 taataaatgctgcattggtattttaaagtgataattattttgaga 36794217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 43410403 - 43410363
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  43410403 taataaatgttgcattagtattctaaagtgacaattatttt 43410363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 8928585 - 8928547
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattt 70  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  8928585 aataaatactgcattggtattataaagtgacaattattt 8928547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 7491128 - 7491088
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||| ||||| |||| ||||||||||||||||||||||    
T  7491128 aaatgtttcattgatattttaaagtgacaattattttgaga 7491088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 19444123 - 19444083
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||||||||||| |||| | ||||||||||||||||    
T  19444123 taataaatgttgcattgatattttgaagtgacaattatttt 19444083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 37322406 - 37322362
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| | ||| |||||| ||||||||||||||||||||||    
T  37322406 taataaatgctacataggtattctaaagtgacaattattttgaga 37322362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 35380478 - 35380522
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35380478 taataaatgttgcattggtattataaagtgacaattattttgaga 35380522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 35311369 - 35311413
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  35311369 taataaatgttgcattggtattgtaaagtgacaattattttgaga 35311413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 52859938 - 52859982
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  52859938 taataaatgttgcattggtattctaaagtgacaattattttgaga 52859982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 49746937 - 49746895
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  49746937 taataaatgttgcattggtattgtaaagtgacaattattttga 49746895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 11907743 - 11907787
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  11907743 taataaatgctgcattggtattctaaagtgacaattattttgaga 11907787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 22130019 - 22129975
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| |||| |||||||||||||||||    
T  22130019 taataaatgttgcattggtattgtaaaatgacaattattttgaga 22129975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 25233159 - 25233115
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  25233159 taataaatgttgcattgatattctaaagtgacaattattttgaga 25233115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 38405247 - 38405291
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  38405247 taataaatgttgcattgctattctaaagtgacaattattttgaga 38405291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 42617047 - 42617091
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  42617047 taataaatgttgcatttgtattctaaagtgacaattattttgaga 42617091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 47773163 - 47773207
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  47773163 taataaatgctgcattggtattctaaagtgacaattattttgaga 47773207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 49176079 - 49176123
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||    
T  49176079 taataattgttgcattggtattctaaagtgacaattattttgaga 49176123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 26147763 - 26147806
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  26147763 aataaatgttgtattggtattctaaagtgacaattattttgaga 26147806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 47359115 - 47359160
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgagat 76  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||||    
T  47359115 taataaatgttacattgatattataaagagacaattattttgagat 47359160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 2066768 - 2066724
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||    
T  2066768 taataaatgcttcattggtattctaaagtgacaattattttgaga 2066724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 4972550 - 4972506
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||    
T  4972550 taataaatgttacattggtattgtaaagtgacagttattttgaga 4972506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 5841572 - 5841616
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  5841572 taataaatgatgcattgatattctaaagtgacaattattttgaga 5841616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 16821476 - 16821516
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  16821476 taataaatgctgcattggtattctaaagtgacaattatttt 16821516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 28501029 - 28501073
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||    
T  28501029 taataaatgttgtattggtattctaaagagacaattattttgaga 28501073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 40122999 - 40123039
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  40122999 taataaatgttgcattggtattgtaaagtgataattatttt 40123039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 51624763 - 51624719
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||    
T  51624763 taataaatgttacattgatattgtaaagtgacaattattttgaga 51624719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 21240846 - 21240888
Alignment:
Q  33 ataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||| |||| |||||||||| |||||||||||    
T  21240846 ataaatgttgcattgatattctaaagtgacatttattttgaga 21240888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 5618524 - 5618483
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttga 73  Q
    |||||||| ||||||| |||| ||||||||||||||||||||    
T  5618524 aataaatgctgcattgatattttaaagtgacaattattttga 5618483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 52868949 - 52868908
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||||| ||| |||||||||| |||||||||||||||    
T  52868949 aataaatgttgaattagtattataaaatgacaattattttga 52868908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 2653397 - 2653357
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||||||||||| |||| ||||||||||| ||||||    
T  2653397 taataaatgttgcattgatattctaaagtgacaactatttt 2653357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 3098459 - 3098415
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| ||| |||| |||||||||||||    
T  3098459 taataaatgttgcattgatattttaacgtgataattattttgaga 3098415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 7061808 - 7061852
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| |||| |||| |||||| |||||||||||||||    
T  7061808 taataaatgttgtattgatattttaaagtaacaattattttgaga 7061852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 10754351 - 10754307
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||| ||||||||||||||| || | |||||||||||||||||    
T  10754351 taataattgttgcattggtattttagattgacaattattttgaga 10754307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 10968120 - 10968076
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||| ||||||||||||||| || | |||||||||||||||||    
T  10968120 taataattgttgcattggtattttagattgacaattattttgaga 10968076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 19265780 - 19265744
Alignment:
Q  34 taaatgttgcattggtattataaagtgacaattattt 70  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  19265780 taaatgttgcattagtattctaaagtgacaattattt 19265744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 21698653 - 21698693
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||| |||||||| |||| ||||||||||||||||||    
T  21698653 taataaatattgcattgatattttaaagtgacaattatttt 21698693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 42517790 - 42517830
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||| |||||| ||||| ||||||||||||||||||    
T  42517790 taataaatgctgcatttgtattttaaagtgacaattatttt 42517830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 49428486 - 49428529
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| | || ||||||||||||||||||||||    
T  49428486 taataaatgttgcattgat-ttctaaagtgacaattattttgaga 49428529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 54921772 - 54921804
Alignment:
Q  44 attggtattataaagtgacaattattttgagat 76  Q
    ||||||||| |||||||||||||||||||||||    
T  54921772 attggtattgtaaagtgacaattattttgagat 54921804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 252941 - 252985
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  252941 taataaatgttgcattggtattataaagtgacaatttttttgaga 252985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 13335194 - 13335150
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  13335194 taataaatgttgcattggtattctaaagtgacaattattttgaga 13335150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 22771974 - 22772018
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  22771974 taataaatgttgcattggtattctaaagtgacaattattttgaga 22772018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 396750 - 396790
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  396750 taataaatgttgcattggtattctaaagtgacaattatttt 396790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 10180086 - 10180126
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  10180086 taataaatgttgcattggtattctaaagtgacaattatttt 10180126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 10953871 - 10953915
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  10953871 taataaatgttgcattggtatcgtaaagtgacaattattttgaga 10953915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 10961876 - 10961920
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  10961876 taataaatgttgcattggtatcgtaaagtgacaattattttgaga 10961920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 17719397 - 17719441
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  17719397 taataaatgttgcattggtattctaaagtgacaattatttagaga 17719441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 5053292 - 5053335
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  5053292 aataaatgttgcattgatattttaaagtgacaattattttgaga 5053335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 21216240 - 21216279
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  21216240 aataaatgttgcattggtattgtaaagtgacaattatttt 21216279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 40996505 - 40996544
Alignment:
Q  36 aatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  40996505 aatgttgcattggtattctaaagtgacaattattttgaga 40996544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 1875878 - 1875916
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatt 69  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  1875878 taataaatgttgcattggtattgtaaagtgacaattatt 1875916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 9300254 - 9300298
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||    
T  9300254 taataaatactgcattggtattgtaaagtgacaattattttgaga 9300298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 26626251 - 26626295
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  26626251 taataaatgctgcattgatattttaaagtgacaattattttgaga 26626295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 31231707 - 31231667
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  31231707 taataaatgatgcattggtattataaaatgacaattatttt 31231667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 34948824 - 34948868
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||    
T  34948824 taataaatattgcattggtattctaaagtaacaattattttgaga 34948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 39482589 - 39482545
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||    
T  39482589 taataaatactgcattggtattgtaaagtgacaattattttgaga 39482545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 25285098 - 25285141
Alignment:
Q  33 ataaatgttgcattggtattataaagtgacaattattttgagat 76  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||    
T  25285098 ataaatgttgcgttgttattatatagtgacaattattttgagat 25285141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 36007029 - 36007072
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||    
T  36007029 aataattgttgcattagtattctaaagtgacaattattttgaga 36007072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 29226666 - 29226708
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||    
T  29226666 taataaatgctgcattgatattttaaagtgacaattattttga 29226708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 32476255 - 32476221
Alignment:
Q  41 tgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| ||||||||||||||||||||||    
T  32476255 tgcattggtattctaaagtgacaattattttgaga 32476221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 39405739 - 39405697
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||    
T  39405739 taataaatgctgcattgatattctaaagtgacaattattttga 39405697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 44761641 - 44761675
Alignment:
Q  41 tgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| ||||||||||||||||||||||    
T  44761641 tgcattggtattgtaaagtgacaattattttgaga 44761675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 45425806 - 45425848
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||    
T  45425806 taataaatgttacattgatattgtaaagtgacaattattttga 45425848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 50793 - 50753
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||| ||||||| |||| ||||||||||||||||||    
T  50793 taataaatgctgcattgatattctaaagtgacaattatttt 50753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 2767436 - 2767480
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| ||| ||||| ||||||||||||||||| ||||    
T  2767436 taataaatgttgtattagtattctaaagtgacaattatttcgaga 2767480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 10098131 - 10098175
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| || ||||||||| |||||| |||||||||||||||    
T  10098131 taataaatgatgtattggtattctaaagtaacaattattttgaga 10098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 17823899 - 17823855
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||| ||| |||| ||||||||| |||||||||||||||||    
T  17823899 taataaatattgtattgttattataaattgacaattattttgaga 17823855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 32678393 - 32678353
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||| ||||||| |||| ||||||||||||||||||    
T  32678393 taataaatgatgcattgatattttaaagtgacaattatttt 32678353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 34394097 - 34394137
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||  |||||||||||| ||||||||||||||||||    
T  34394097 taataaattatgcattggtattttaaagtgacaattatttt 34394137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 39466176 - 39466220
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| || |||||| |||||||| |||||||||||||    
T  39466176 taataaatgttgtatcggtattgtaaagtgataattattttgaga 39466220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 21390278 - 21390234
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  21390278 taataaacgttgcattggtattataaagtgacaattattttgaga 21390234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 25571404 - 25571360
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  25571404 taataaatgttgcattggtattctaaagtgacaattattttgaga 25571360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 34947484 - 34947440
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  34947484 taataaatgttgcattggtattctaaagtgacaattattttgaga 34947440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 37245674 - 37245630
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  37245674 taataaatgttgcattggtattgtaaagtgacaattattttgaga 37245630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 40076302 - 40076258
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  40076302 taataaatgctgcattggtattataaagtgacaattattttgaga 40076258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 83368 - 83324
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  83368 taataaatgctgcattggtattctaaagtgacaattattttgaga 83324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 759236 - 759280
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  759236 taataaatgctgcattggtattctaaagtgacaattattttgaga 759280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 19271877 - 19271921
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  19271877 taataaatgttgcattggtattgtaaagtaacaattattttgaga 19271921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 21350771 - 21350815
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  21350771 taataaatgctgcattggtattgtaaagtgacaattattttgaga 21350815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 21760129 - 21760173
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  21760129 taataaatgttgcattgatattctaaagtgacaattattttgaga 21760173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 42935642 - 42935598
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  42935642 taataaatgttgcatttgtattctaaagtgacaattattttgaga 42935598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 33819196 - 33819154
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  33819196 taataaatgctgcattggtattgtaaagtgacaattattttga 33819154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 24166974 - 24166929
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgagat 76  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||    
T  24166974 taataaatattgcattggtattgtaaagtgacaattattttaagat 24166929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 47045618 - 47045655
Alignment:
Q  39 gttgcattggtattataaagtgacaattattttgagat 76  Q
    |||||||||||||| |||||||||||||||||||||||    
T  47045618 gttgcattggtattctaaagtgacaattattttgagat 47045655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 23670469 - 23670425
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  23670469 taataaatgatgcattagtattgtaaagtgacaattattttgaga 23670425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 27920970 - 27920926
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||    
T  27920970 taataaatgttgcattaatattctaaagtgacaattattttgaga 27920926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 28103714 - 28103670
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||    
T  28103714 taataaatgttgcaattgtattgtaaagtgacaattattttgaga 28103670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 28202454 - 28202498
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| || ||||||||| ||||||||||||||||||||||    
T  28202454 taataaatgctgtattggtattctaaagtgacaattattttgaga 28202498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 31930647 - 31930691
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||    
T  31930647 taataaatgtttcattgatattctaaagtgacaattattttgaga 31930691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 34100692 - 34100732
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  34100692 taataaatgttgcattagtattgtaaagtgacaattatttt 34100732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 36790722 - 36790678
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  36790722 taataaatgctgcattgctattctaaagtgacaattattttgaga 36790678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 43873907 - 43873863
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  43873907 taataaatgctgcattgatattctaaagtgacaattattttgaga 43873863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 2459455 - 2459413
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||    
T  2459455 taataaatgctgcattggtattgtaaagtgtcaattattttga 2459413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 7457565 - 7457607
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||||||||||| |||| |||||||| |||||||||||    
T  7457565 taataaatgttgcattgatattgtaaagtgataattattttga 7457607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 21760321 - 21760359
Alignment:
Q  37 atgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  21760321 atgttgcattggtattttaacgtgacaattattttgaga 21760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 9785972 - 9785928
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||  |||| ||||||||||||||||||||||    
T  9785972 taataaatgctgcattaatattttaaagtgacaattattttgaga 9785928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 11373573 - 11373617
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| |||||| |||||||||||||||    
T  11373573 taataaatgctgcattgatattgtaaagtaacaattattttgaga 11373617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 24516434 - 24516478
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| |||| |||||||||||| ||||    
T  24516434 taataaatgttgcattgatattgtaaaatgacaattatttcgaga 24516478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 37490359 - 37490319
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||||||||||| ||||||||| ||| ||||    
T  37490359 taataaatgttgcattggtattttaaagtgactattgtttt 37490319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 44424129 - 44424085
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| |||||||| |||||||||||||    
T  44424129 taataaatgctgcattgatattttaaagtgataattattttgaga 44424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 6801907 - 6801863
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  6801907 taataaatgttgcattgatattataaagtgacaattattttgaga 6801863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 21010146 - 21010104
Alignment:
Q  33 ataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  21010146 ataaatgctgcattggtattataaagtgacaattattttgaga 21010104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 15058095 - 15058055
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  15058095 taataaatgttgcatcggtattataaagtgacaattatttt 15058055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 21478232 - 21478276
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||    
T  21478232 taataaatgttgtattggtattgtaaagtgacaattattttgaga 21478276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 27367236 - 27367280
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  27367236 taataaatgatgcattggtattctaaagtgacaattattttgaga 27367280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 27457583 - 27457627
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  27457583 taataaatgatgcattggtattctaaagtgacaattattttgaga 27457627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 30716876 - 30716832
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  30716876 taataaatgttgcactggtattctaaagtgacaattattttgaga 30716832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 23142643 - 23142601
Alignment:
Q  33 ataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  23142643 ataaatgttgcattgatattgtaaagtgacaattattttgaga 23142601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 23397754 - 23397796
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  23397754 taataaatgttgcattgatattctaaagtgacaattattttga 23397796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 5302328 - 5302284
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  5302328 taataaatgctgcattagtattctaaagtgacaattattttgaga 5302284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 11656084 - 11656128
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  11656084 taataaatgctgcattgatattctaaagtgacaattattttgaga 11656128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 13207229 - 13207273
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||| | |||||||||||||||| |||||    
T  13207229 taataaatgttgcattggtagtctaaagtgacaattattatgaga 13207273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 29363281 - 29363237
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||    
T  29363281 taataaatgctgcattggtattctgaagtgacaattattttgaga 29363237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 181533 - 181491
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgag 74  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  181533 taataaatgttgcattg-tattgtaaagtgacaattattttgag 181491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 7920217 - 7920174
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| |||| |||||||| |||||||||||||    
T  7920217 aataaatgttgcattgatattctaaagtgataattattttgaga 7920174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 27367564 - 27367607
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgag 74  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||    
T  27367564 taataaatgttacattggtattgtaaagtgacaattattctgag 27367607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 27457911 - 27457954
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgag 74  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||    
T  27457911 taataaatgttacattggtattgtaaagtgacaattattctgag 27457954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 1956116 - 1956150
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaat 65  Q
    ||||||||||||||||| |||||||||||||||||    
T  1956116 taataaatgttgcattgttattataaagtgacaat 1956150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 21425696 - 21425738
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||||||||||| |||| |||||| |||||||||||||    
T  21425696 taataaatgttgcattgatattgtaaagtaacaattattttga 21425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 1781778 - 1781738
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||| || |||| ||||||||||||||||||||||    
T  1781778 aaatgttgcaatgatattgtaaagtgacaattattttgaga 1781738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 11143723 - 11143767
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||| | ||||||||||||| ||||||||    
T  11143723 taataaatgctgcattggtagtctaaagtgacaatttttttgaga 11143767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 12307731 - 12307775
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| |||  |||| ||||||||||||||||||||||    
T  12307731 taataaatgttgtattaatattttaaagtgacaattattttgaga 12307775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 31283536 - 31283576
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||| |||| |||||||| |||||||||||||    
T  31283536 aaatgttgcattgttattttaaagtgataattattttgaga 31283576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 34299971 - 34299931
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||| |||| |||| ||||||||||||||||||    
T  34299971 taataaatgttgtattgatattctaaagtgacaattatttt 34299931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 34657702 - 34657746
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||  ||||| |||||| ||||||||||||||||||||||    
T  34657702 taataaattctgcataggtattgtaaagtgacaattattttgaga 34657746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 6315913 - 6315957
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  6315913 taataaatgttgcattggtattctaaagtgacaattattttgaga 6315957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 6754002 - 6753962
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6754002 aaatgttgcattggtattataaagtgacaattattttgaga 6753962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 19929923 - 19929882
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttg 72  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  19929923 taataaatgttgcattggtattctaaagtgacaattattttg 19929882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 1248740 - 1248784
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  1248740 taataaatgttgcattgatattctaaagtgacaattattttgaga 1248784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 4818527 - 4818483
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  4818527 taataaatgctacattggtattataaagtgacaattattttgaga 4818483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 6616016 - 6616060
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||    
T  6616016 taataaatgttgcataggtattgtaaagtgacaattattttgaga 6616060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 41496057 - 41496013
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  41496057 taataaatgttgcattagtattgtaaagtgacaattattttgaga 41496013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 6753794 - 6753836
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  6753794 taataaatgttgcattggtattctaaagtgataattattttga 6753836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 40530361 - 40530403
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  40530361 taataaatgctgcattggtattgtaaagtgacaattattttga 40530403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 3348266 - 3348310
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||    
T  3348266 taataaatgctgcattggtattctaaaatgacaattattttgaga 3348310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 15818618 - 15818662
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  15818618 taattaatgttgcattggtattgtaaagtgacagttattttgaga 15818662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 41062295 - 41062339
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| |||||| | |||||||||||||    
T  41062295 taataaatgttgcattggtattctaaagttataattattttgaga 41062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 2588200 - 2588243
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||| ||||||| |||| ||||||||||||||||||||||    
T  2588200 aataaatgctgcattgatattctaaagtgacaattattttgaga 2588243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 9515710 - 9515668
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  9515710 taataaatgatgcattagtattgtaaagtgacaattattttga 9515668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 29374170 - 29374128
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||||||||||| |||| |||||||| |||||||||||    
T  29374170 taataaatgttgcattgatattgtaaagtgataattattttga 29374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 27580579 - 27580539
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  27580579 aaatgttgcattggttatgtaaagtgacaattattttgaga 27580539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 40899895 - 40899851
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||| || |||| ||||||||||||||||||||||    
T  40899895 taataaatgctgcaatgttattctaaagtgacaattattttgaga 40899851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 10366787 - 10366831
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  10366787 taataaatgttgcattggtattctaaagtgacaattattttgaga 10366831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 37497468 - 37497424
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  37497468 taataaatgttgtattggtattataaagtgacaattattttgaga 37497424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 43254002 - 43254046
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  43254002 taataaatgttgcattggtattgtaaagtgacaattattttgaga 43254046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 44301538 - 44301494
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  44301538 taataaatgttgcattgatattataaagtgacaattattttgaga 44301494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 27471312 - 27471268
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| || ||||||||||||||||||||||||||||||||    
T  27471312 taataaatgctgtattggtattataaagtgacaattattttgaga 27471268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 30710626 - 30710582
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  30710626 taataaatgttgcattgatattctaaagtgacaattattttgaga 30710582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 36476561 - 36476517
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  36476561 taataaatgctgcattggtattctaaagtgacaattattttgaga 36476517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 37773105 - 37773148
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  37773105 aataaatgctgcattggtattgtaaagtgacaattattttgaga 37773148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 39043893 - 39043932
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattt 70  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  39043893 taataaatgttgcattggtattctaaagtgacaattattt 39043932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 34957481 - 34957437
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||    
T  34957481 taataaatgttacattggtattttaaagtgataattattttgaga 34957437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 38795317 - 38795277
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  38795317 aaatattgcattggtattctaaagtgacaattattttgaga 38795277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 43715283 - 43715239
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||    
T  43715283 taataaatgttacattgatattctaaagtgacaattattttgaga 43715239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 45710822 - 45710782
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  45710822 aaatattgtattggtattataaagtgacaattattttgaga 45710782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 37804714 - 37804671
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||    
T  37804714 aataaatgttgcattgatattctaaagggacaattattttgaga 37804671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 53560192 - 53560149
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||    
T  53560192 aataaatgctgcattagtattctaaagtgacaattattttgaga 53560149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 19822989 - 19822944
Alignment:
Q  31 taataaatgttgcattggtattataaa-gtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||||    
T  19822989 taataaatgctgcattggtattctaaaagtgacaattattttgaga 19822944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 24569235 - 24569276
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttga 73  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  24569235 aataaatgtcacattggtattgtaaagtgacaattattttga 24569276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 1778362 - 1778318
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| || | ||||||||||||||||||||||    
T  1778362 taataaatgatgcattgatactgtaaagtgacaattattttgaga 1778318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 27549424 - 27549464
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||||||||||| |||| |||||||||| |||||||    
T  27549424 taataaatgttgcattgatattgtaaagtgacagttatttt 27549464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 30190798 - 30190842
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| ||||  |||| ||||||||||||||||||||||    
T  30190798 taataaatgttacatttttattctaaagtgacaattattttgaga 30190842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 36460554 - 36460598
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||| |||||||| |||  ||||||||||||||||||||||    
T  36460554 taataaatattgcattgatatcgtaaagtgacaattattttgaga 36460598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 37311926 - 37311886
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||| ||||||| |||| ||||||||||||||||||    
T  37311926 taataaatgctgcattgatattgtaaagtgacaattatttt 37311886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 37695805 - 37695837
Alignment:
Q  31 taataaatgttgcattggtattataaagtgaca 63  Q
    |||||||||||||||||||||| ||||||||||    
T  37695805 taataaatgttgcattggtattctaaagtgaca 37695837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 37741572 - 37741532
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||| |||| |||| ||||||||||||||||||    
T  37741572 taataaatgttgtattgatattttaaagtgacaattatttt 37741532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 40462297 - 40462253
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgagat 76  Q
    ||||||||||||||||  ||| ||||||||||| |||||||||||    
T  40462297 aataaatgttgcattgacattctaaagtgacaactattttgagat 40462253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 41038531 - 41038571
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||| |||||| ||||| ||||||||||||||||||    
T  41038531 taataaatgctgcatttgtattttaaagtgacaattatttt 41038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 48541130 - 48541170
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  48541130 taataaatgttgcactgatattataaaatgacaattatttt 48541170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 51065151 - 51065195
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| |||| |||||||||||| ||||    
T  51065151 taataaatgctgcattggtattgtaaaatgacaattatttagaga 51065195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 51838098 - 51838142
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||   ||| ||||||||||||||||||||||    
T  51838098 taataaatgttgcattataattgtaaagtgacaattattttgaga 51838142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 54726462 - 54726418
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||    
T  54726462 taataaatgttgcattagtattctaaagttgcaattattttgaga 54726418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 23169132 - 23169176
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  23169132 taataaatgttgcattggtattgtaaagtgacaattattttgaga 23169176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 6785233 - 6785189
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||    
T  6785233 taataaatgttgcataggtattgtaaagtgacaattattttgaga 6785189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 12039059 - 12039015
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  12039059 taataaatgttgcattagtattgtaaagtgacaattattttgaga 12039015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 20209981 - 20210025
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  20209981 taataaatgctgcattggtattctaaagtgacaattattttgaga 20210025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 24991795 - 24991839
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  24991795 taataaatgttgcattagtattgtaaagtgacaattattttgaga 24991839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 35367779 - 35367735
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  35367779 taataaatgtttcattggtattgtaaagtgacaattattttgaga 35367735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 37506101 - 37506057
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  37506101 taataaatgttgcattgatattctaaagtgacaattattttgaga 37506057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 49224127 - 49224171
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  49224127 taataaatgttgcattagtattctaaagtgacaattattttgaga 49224171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 4659749 - 4659710
Alignment:
Q  36 aatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  4659749 aatgttgcattggtattgtaaagtgacaattattttgaga 4659710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 39864088 - 39864045
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgag 74  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  39864088 taataaatgttgcattgatattgtaaagtgacaattattttgag 39864045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 12151165 - 12151123
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  12151165 taataaatgctgcattgatattataaagtgacaattattttga 12151123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 40144988 - 40145030
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  40144988 taataaatgttgcattgatattctaaagtgacaattattttga 40145030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 10495809 - 10495772
Alignment:
Q  38 tgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||| |||||||||||||||||||||||||||    
T  10495809 tgttgcattgatattataaagtgacaattattttgaga 10495772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 3312096 - 3312056
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  3312096 taataaatgttgtattgatattataaagtgacaattatttt 3312056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 26256229 - 26256273
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||    
T  26256229 taataaatgatacattggtattataaagtggcaattattttgaga 26256273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 33733403 - 33733447
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||    
T  33733403 taataaatgcttcattggtattctaaagtgacaattattttgaga 33733447  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 41121964 - 41122008
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||    
T  41121964 taataaatgttgtattgatattttaaagtgacaattattttgaga 41122008  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 43500881 - 43500925
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  43500881 taataaatgctgcattagtattctaaagtgacaattattttgaga 43500925  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 45331316 - 45331276
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  45331316 taataaatgttgcattggtattttaaagtaacaattatttt 45331276  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 52429319 - 52429279
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  52429319 taataaatgttgcattgatattgtaaagtgacaattatttt 52429279  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 29074856 - 29074817
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  29074856 aataaatgttgtatttgtattataaagtgacaattatttt 29074817  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 45775445 - 45775488
Alignment:
Q  32 aataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||    
T  45775445 aataaatggcgcattagtattataaagtgacaattattttgaga 45775488  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 6160593 - 6160635
Alignment:
Q  33 ataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||| |||| |||| |||||||||||||||||    
T  6160593 ataaatgttgcattgatattctaaaatgacaattattttgaga 6160635  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 28748968 - 28748926
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||    
T  28748968 taataaatgctgcattgctattataaagtgataattattttga 28748926  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 37275574 - 37275536
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  37275574 aaatgttgcattgatattctaaagtgacaattattttga 37275536  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 52837254 - 52837216
Alignment:
Q  37 atgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  52837254 atgttgcattgctattataaagtggcaattattttgaga 52837216  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 15699114 - 15699073
Alignment:
Q  34 taaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||| ||||||| |||| ||||||||||||||||||||||    
T  15699114 taaatgctgcattgatattctaaagtgacaattattttgaga 15699073  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 13579761 - 13579801
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  13579761 taataaatattgcatcggtattttaaagtgacaattatttt 13579801  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 16395198 - 16395230
Alignment:
Q  43 cattggtattataaagtgacaattattttgaga 75  Q
    |||||||||| ||||||||||||||||||||||    
T  16395198 cattggtattctaaagtgacaattattttgaga 16395230  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 17988886 - 17988930
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||||||||||  |||| |||| |||||||||||||||||    
T  17988886 taataaatgttgcattaatattttaaaatgacaattattttgaga 17988930  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 21910149 - 21910193
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||| |||||| |||| |||||||||||||||| |||||    
T  21910149 taataaatgtggcattgatattttaaagtgacaattattctgaga 21910193  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 30437777 - 30437741
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattatttt 71  Q
    |||||||||||| |||||||||| |||||||||||||    
T  30437777 aaatgttgcattagtattataaattgacaattatttt 30437741  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 31042774 - 31042730
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| || |||| |||| ||||||||||||||||||||||    
T  31042774 taataaatgatgtattgatattctaaagtgacaattattttgaga 31042730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 8120 - 8164
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  8120 taataaatgctgcattggtattctaaagtgacaattattttgaga 8164  T

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Target: scaffold0159 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 34156 - 34200
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  34156 taataaatgatgcattgatattgtaaagtgacaattattttgaga 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 1533 - 1493
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattatttt 71  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  1533 taataaatgttgcatcggtattctaaagtgacaattatttt 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 826 - 864
Alignment:
Q  36 aatgttgcattggtattataaagtgacaattattttgag 74  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  826 aatgttgcaatggtattgtaaagtgacaattattttgag 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 50181 - 50139
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttga 73  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||    
T  50181 taataaatgctgcattgatattctaaagtgacaattattttga 50139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 22325 - 22281
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| || |||||| |||||||| |||||||||||||    
T  22325 taataaatgttgtatcggtattgtaaagtgataattattttgaga 22281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 5369 - 5325
Alignment:
Q  31 taataaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    |||||||||||| ||||| ||| |||||| |||||||||||||||    
T  5369 taataaatgttgtattggcattctaaagtaacaattattttgaga 5325  T

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Target: scaffold0294 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 17012 - 16972
Alignment:
Q  35 aaatgttgcattggtattataaagtgacaattattttgaga 75  Q
    ||||| ||||||| ||||||||||||| |||||||||||||    
T  17012 aaatgctgcattgatattataaagtgataattattttgaga 16972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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