View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13307_low_24 (Length: 225)
Name: NF13307_low_24
Description: NF13307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13307_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 77 - 209
Target Start/End: Complemental strand, 1348388 - 1348256
Alignment:
| Q |
77 |
ttcagatctgccagcaaaaaacagatctgagcgacgcactgcgaagtcaagagacggacgtcgacatctacgaggtgaggaaagcgacgccgacacctac |
176 |
Q |
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| T |
1348388 |
ttcagatctgccaacaaaaaacagatctgagcaacgcactgcgaagtcaagagacggacgtcgacatctgcgaggtgaggaaagcgacgccgacacctac |
1348289 |
T |
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| Q |
177 |
aagattcagatccgccaccggcgaggtcagaag |
209 |
Q |
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|||||||||||||||||| |||||||||||||| |
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| T |
1348288 |
aagattcagatccgccacaggcgaggtcagaag |
1348256 |
T |
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