View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13310_high_23 (Length: 233)
Name: NF13310_high_23
Description: NF13310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13310_high_23 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 34502733 - 34502951
Alignment:
| Q |
13 |
aatattctcacacacacccgtcttactatgtgatatgcatttatgggataattgttttttaattctcattttaagaagaaaaataaaatgtacttcatta |
112 |
Q |
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| T |
34502733 |
aatattctcacacacacccctcttactatgtgatatgcatttatgggataattgttttttaattctcattttaagaagaaaaataaaatgtacttcatta |
34502832 |
T |
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| Q |
113 |
ttcaaaacaagaagaagnnnnnnnctacaannnnnnnataaatgttttctatcggaaggaatatatatatgaatctagttatttacatgtatcacaagtt |
212 |
Q |
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| T |
34502833 |
ttcaaaacaagaagaagaaaaaaactacaatttttttataaatgttttttatcggaagga--atatatatgaatctagttatttacatgtatcacaagtt |
34502930 |
T |
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| Q |
213 |
tatagtaactcaaaataaagc |
233 |
Q |
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| T |
34502931 |
tatagtaactcaaaataaagc |
34502951 |
T |
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