View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13310_low_11 (Length: 434)
Name: NF13310_low_11
Description: NF13310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13310_low_11 |
 |  |
|
| [»] scaffold1924 (1 HSPs) |
 |  |  |
|
| [»] scaffold0126 (1 HSPs) |
 |  |  |
|
| [»] scaffold0111 (1 HSPs) |
 |  |  |
|
| [»] scaffold0115 (1 HSPs) |
 |  |  |
|
| [»] scaffold0086 (1 HSPs) |
 |  |  |
|
| [»] scaffold0135 (1 HSPs) |
 |  |  |
|
| [»] scaffold0171 (1 HSPs) |
 |  |  |
|
| [»] scaffold0123 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 6 - 412
Target Start/End: Complemental strand, 8251295 - 8250887
Alignment:
| Q |
6 |
gtggagaagcataggtgatcattaggagtgaaattagttttgaaagaagttaaaaatgagacgaactttgagtttttaagaaaattaag-aaccttgtaa |
104 |
Q |
| |
|
||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
8251295 |
gtggataaacataggtgatcattaggagtgaaattggttttgaaagaagttaaaaatgagacgaaatttgagtttttaagaaaattaaggaaccttgtaa |
8251196 |
T |
 |
| Q |
105 |
aaccaaattgctatgaatggttaactaagatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaat |
204 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8251195 |
aaccaaaatgctatgagtggttaactaagatggtagataatatgtagggatgtttttatactatgtaatagcttggaatcatactttggttgaggaaaat |
8251096 |
T |
 |
| Q |
205 |
tgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaa |
304 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8251095 |
taaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaa |
8250996 |
T |
 |
| Q |
305 |
cataataatgaatcaatgttt-attggtgtattaaatggtttctatcatgatgtgctggaatattcctttttatgcgattttgtaatttatgaaacagtc |
403 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||| |||||||||||| || |
|
|
| T |
8250995 |
attaagaatgaatcaatgtttgattggtgtattaaatggtttctatcatgatgtggtggaatattcatttttatgttgttttgtgatttatgaaacaatc |
8250896 |
T |
 |
| Q |
404 |
tgtttcttt |
412 |
Q |
| |
|
||||||||| |
|
|
| T |
8250895 |
tgtttcttt |
8250887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 15 - 384
Target Start/End: Complemental strand, 16175723 - 16175352
Alignment:
| Q |
15 |
cataggtgatcattaggagtgaaattagttttgaaagaagttaaaaatgagacgaactttgagtttttaagaaaattaag-aaccttgtaaaaccaaatt |
113 |
Q |
| |
|
||||||||||||||| || |||| || |||||||| ||||| |||||||||| ||||||||| |||| | |||||| || ||| |||| |||||||| | |
|
|
| T |
16175723 |
cataggtgatcattaagattgaatttcattttgaaataagtttaaaatgagacaaactttgaggttttgataaaattgaggaactttgtgaaaccaaaat |
16175624 |
T |
 |
| Q |
114 |
gctatgaatggttaactaagatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaatag |
213 |
Q |
| |
|
|||||||||| |||||| |||||||||| ||||||||||||||||||||| | ||||| | |||||||||||||||| ||| | ||||||||||||| |
|
|
| T |
16175623 |
gctatgaatgattaacttcgatggtagatgatatgtagggatgtttttatattatgtaagaacttggaatcatacttttattgggaaaaattgaaaatat |
16175524 |
T |
 |
| Q |
214 |
gcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataat |
313 |
Q |
| |
|
||||||||||| |||||||| ||| ||| ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||| ||| |
|
|
| T |
16175523 |
gcgattttgtgaaaatagacgaacgttgccaaaatgagcttttatgatcctataacatgtaaatgactttgtaaacatgataacatggtaacttaagaat |
16175424 |
T |
 |
| Q |
314 |
gaatcaatgttt-attggtgtattaaatggtttctatcatgatgtgctggaatattcctttttatgcgattt |
384 |
Q |
| |
|
|||||||||||| |||||||||||||||| || ||||||||||||| || ||| ||| ||| ||| |||||| |
|
|
| T |
16175423 |
gaatcaatgtttgattggtgtattaaatgtttgctatcatgatgtggtgaaattttcgtttatatacgattt |
16175352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 17150345 - 17150451
Alignment:
| Q |
15 |
cataggtgatcattaggagtgaaattagttttgaaagaagttaaaaatgagacgaactttgagtttttaagaaaatta-agaaccttgtaaaaccaaatt |
113 |
Q |
| |
|
|||||||| ||||||||| |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||| | |
|
|
| T |
17150345 |
cataggtgttcattaggattgaatttggttttgaaacaagttaaaaatgagatgaactttgagtttttaagaaaataagtgaaccttgtgaaaccaaaat |
17150444 |
T |
 |
| Q |
114 |
gctatga |
120 |
Q |
| |
|
||||||| |
|
|
| T |
17150445 |
gctatga |
17150451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 324
Target Start/End: Original strand, 14266858 - 14266981
Alignment:
| Q |
201 |
aaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatg |
300 |
Q |
| |
|
|||||||||||| || |||||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| | ||| ||| || |||||||| ||| |
|
|
| T |
14266858 |
aaattgaaaataagcaattttgtgaaaatagacgaactttgtcaaaatgagcttttatgatcttataccttgtgattggttttttattcatgataatatg |
14266957 |
T |
 |
| Q |
301 |
gtaacataataatgaatcaatgtt |
324 |
Q |
| |
|
||| ||| |||||||||||||| |
|
|
| T |
14266958 |
ataaaatacgaatgaatcaatgtt |
14266981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 287
Target Start/End: Complemental strand, 13488469 - 13488332
Alignment:
| Q |
150 |
agggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatg |
249 |
Q |
| |
|
||||||||||| || | |||| ||| |||||| ||||||| ||||| |||||||||||| |||||||||| |||||||| ||||||||||||||| |
|
|
| T |
13488469 |
agggatgttttcatggtatgtaggagcatggaattatacttttgttgaataaaattgaaaatgaacgattttgtgaaaatagacgaactttgtcaaaatg |
13488370 |
T |
 |
| Q |
250 |
agcttttatggtcacataacttgtaaatggctttgtaa |
287 |
Q |
| |
|
|| || |||| || |||||||| ||||| |||||||| |
|
|
| T |
13488369 |
aggttctatgatcggataacttgcaaatgactttgtaa |
13488332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 6460998 - 6461066
Alignment:
| Q |
218 |
ttttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgta |
286 |
Q |
| |
|
||||||| ||||| || ||||||||||||||||| |||||||||| |||||||| ||||||||||||| |
|
|
| T |
6460998 |
ttttgtgaaaatacacgaactttgtcaaaatgaggttttatggtcggataacttgcaaatggctttgta |
6461066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 17492367 - 17492470
Alignment:
| Q |
218 |
ttttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaat |
317 |
Q |
| |
|
||||||| |||||||| |||||||||||||||| ||||||| || |||||||| ||||||| ||||| |||||||||| |||| | |||| || |||| |
|
|
| T |
17492367 |
ttttgtgaaaatagacgaactttgtcaaaatgaaattttatgatcggataacttgcaaatggc-ttgtatacatgataacgtggtgagataagaaggaat |
17492465 |
T |
 |
| Q |
318 |
caatg |
322 |
Q |
| |
|
||||| |
|
|
| T |
17492466 |
caatg |
17492470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 17560847 - 17560744
Alignment:
| Q |
218 |
ttttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaat |
317 |
Q |
| |
|
||||||| |||||||| |||||||||||||||| ||||||| || |||||||| ||||||| ||||| |||||||||| |||| | |||| || |||| |
|
|
| T |
17560847 |
ttttgtgaaaatagacgaactttgtcaaaatgaaattttatgatcggataacttgcaaatggc-ttgtatacatgataacgtggtgagataagaaggaat |
17560749 |
T |
 |
| Q |
318 |
caatg |
322 |
Q |
| |
|
||||| |
|
|
| T |
17560748 |
caatg |
17560744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 397
Target Start/End: Complemental strand, 26427632 - 26427498
Alignment:
| Q |
265 |
ataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatcaatgttt-attggtgtattaaatggtttctatcatgatgtgctgga |
363 |
Q |
| |
|
|||||||| ||||| ||||| | |||||||| ||||| | |||| |||||||||||||| ||||||| |||||||| || |||||||||||| || | |
|
|
| T |
26427632 |
ataacttgcaaatgactttgaattcatgataatatggtgaaataaggatgaatcaatgtttgattggtgaattaaatgtttgttatcatgatgtggtgaa |
26427533 |
T |
 |
| Q |
364 |
atattcct-ttttatgcgattttgtaatttatgaa |
397 |
Q |
| |
|
|||||| | ||||||| ||||| || |||| |||| |
|
|
| T |
26427532 |
atattcgtattttatgtgatttggtgatttgtgaa |
26427498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 20147762 - 20147702
Alignment:
| Q |
218 |
ttttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatg |
278 |
Q |
| |
|
||||||| ||| |||| |||||||||||||||| ||||||| || |||||||||||||| |
|
|
| T |
20147762 |
ttttgtgaaaaaagacgaactttgtcaaaatgatgttttatgatcgaataacttgtaaatg |
20147702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 144 - 330
Target Start/End: Original strand, 11923131 - 11923315
Alignment:
| Q |
144 |
atatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggcgattttgtgcaaatagacaaactttgtc |
243 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||||||| |||||| ||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| |
|
|
| T |
11923131 |
atatgtagggatgtttttatgatgtgtaagaacttggaatcctacttttgttga-gaaaattagaaataggtgattttgtgaaaatagacgaactttgtc |
11923229 |
T |
 |
| Q |
244 |
aaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatcaatgtttattgg |
330 |
Q |
| |
|
| ||| || ||||||| ||| |||| || ||||||||||||||||||| ||||||||| | |||| |||||| ||||||| |||| |
|
|
| T |
11923230 |
agaataaggttttatgctcatataa-tttcaaatggctttgtaaacatggtaacatggtgaaataagaatgaaataatgtttgttgg |
11923315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 20847974 - 20847874
Alignment:
| Q |
202 |
aattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatgg |
301 |
Q |
| |
|
|||| ||||| | |||||||||| ||||||| |||||| ||||||| || ||||||| ||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20847974 |
aattaaaaatggtcgattttgtgataatagacgaactttatcaaaataaggttttatgatcagataacttgcaaatggctttgtaaacatgataacatgg |
20847875 |
T |
 |
| Q |
302 |
t |
302 |
Q |
| |
|
| |
|
|
| T |
20847874 |
t |
20847874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 11093662 - 11093799
Alignment:
| Q |
26 |
attaggagtgaaattagttttgaaagaagttaaaaatgagacgaactttgagtttttaagaaaatta-agaaccttgtaaaaccaaattgctatgaatgg |
124 |
Q |
| |
|
||||||| ||||||| ||||||||| | ||||||||||||| |||||||||||||| || | || | ||||||||| ||| |||| |||||||| || |
|
|
| T |
11093662 |
attaggattgaaattggttttgaaacatgttaaaaatgagatgaactttgagttttcgaggagataagtgaaccttgtgaaagcaaaatgctatgattga |
11093761 |
T |
 |
| Q |
125 |
ttaactaagatggtagataatatgtagggatgttttta |
162 |
Q |
| |
|
|||| ||||||| ||||| ||||||||| ||||||||| |
|
|
| T |
11093762 |
ttaattaagatgttagatgatatgtaggaatgttttta |
11093799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 13933844 - 13933748
Alignment:
| Q |
199 |
gaaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataa |
296 |
Q |
| |
|
||||||||||||||| || ||||||| |||||||| ||||||||| ||| ||| ||||||| || |||||||| ||||||||||||||||||||||| |
|
|
| T |
13933844 |
gaaaattgaaaatagacgtttttgtgaaaatagacgaactttgtcgaaa-gaggttttatgatcggataacttgcaaatggctttgtaaacatgataa |
13933748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 94 - 297
Target Start/End: Original strand, 17542480 - 17542683
Alignment:
| Q |
94 |
gaaccttgtaaaaccaaattgctatgaatggttaactaagatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttgg |
193 |
Q |
| |
|
||||||||| |||||||| |||||||| || ||| | |||||| || | ||||||||||||||||| || ||||| | | |||||||||||||| |
|
|
| T |
17542480 |
gaaccttgtgaaaccaaaatgctatgattgattaccgaagatgttatttgatatgtagggatgttttaatgacatgtaagaacatggaatcatactttta |
17542579 |
T |
 |
| Q |
194 |
ttgaggaaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatga |
293 |
Q |
| |
|
||||| ||| ||| |||||| ||||||| | |||||||| ||||| ||||||| | ||||||| || |||||||| |||||||||||| || |||| |
|
|
| T |
17542580 |
ttgagaaaatttggaaatagacgattttacgaaaatagacgaacttgctcaaaataaagttttatgatcggataacttgcaaatggctttgtgaatatga |
17542679 |
T |
 |
| Q |
294 |
taac |
297 |
Q |
| |
|
|||| |
|
|
| T |
17542680 |
taac |
17542683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 259
Target Start/End: Complemental strand, 9269660 - 9269518
Alignment:
| Q |
116 |
tatgaatggttaactaagatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggc |
215 |
Q |
| |
|
||||| || |||||||||||| ||||| |||||||| ||||| || || | ||||| | ||||||| | || |||||||| | |||||||||||| | | |
|
|
| T |
9269660 |
tatgattgattaactaagatgttagatgatatgtagagatgtcttaatggtatgtaagaacttggaaccctaatttggttg-gtaaaattgaaaatggtc |
9269562 |
T |
 |
| Q |
216 |
gattttgtgcaaatagacaaactttgtcaaaatgagcttttatg |
259 |
Q |
| |
|
|||||| || |||||||| |||||||| ||||||| ||||||| |
|
|
| T |
9269561 |
gattttatgaaaatagacgaactttgttgaaatgaggttttatg |
9269518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 9221044 - 9220903
Alignment:
| Q |
116 |
tatgaatggttaactaagatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggc |
215 |
Q |
| |
|
||||| || |||||||||||| ||||| ||| |||||||||| || || | ||||| | ||||||||| || |||||||| | ||||||||| || | |
|
|
| T |
9221044 |
tatgattgattaactaagatgttagatgatacgtagggatgtcttaatggtatgtaagaacttggaatcctaatttggttg-gtaaaattgaatattgtt |
9220946 |
T |
 |
| Q |
216 |
gattttgtgcaaatagacaaactttgtcaaaatgagcttttat |
258 |
Q |
| |
|
|||||| || |||||||| |||||||| ||||||| |||||| |
|
|
| T |
9220945 |
gattttatgaaaatagactaactttgttgaaatgaggttttat |
9220903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 12407447 - 12407495
Alignment:
| Q |
274 |
aaatggctttgtaaacatgataacatggtaacataataatgaatcaatg |
322 |
Q |
| |
|
|||||||||||||||||||||||||| || | |||| |||||||||||| |
|
|
| T |
12407447 |
aaatggctttgtaaacatgataacatagtgaaataagaatgaatcaatg |
12407495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 10115457 - 10115525
Alignment:
| Q |
218 |
ttttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgta |
286 |
Q |
| |
|
||||||| ||||| | ||||||||||||||||| ||||||| || |||||| | ||||||||||||| |
|
|
| T |
10115457 |
ttttgtgaaaatatatgaactttgtcaaaatgagattttatgatcggataactcgcaaatggctttgta |
10115525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 16028425 - 16028485
Alignment:
| Q |
226 |
aaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgta |
286 |
Q |
| |
|
||||| || |||||||||||||| || |||| || ||| |||||||| ||||||||||||| |
|
|
| T |
16028425 |
aaatatacgaactttgtcaaaataaggttttttgatcaaataacttgcaaatggctttgta |
16028485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 94 - 300
Target Start/End: Complemental strand, 8900632 - 8900427
Alignment:
| Q |
94 |
gaaccttgtaaaaccaaattgctatgaatggttaactaagatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttgg |
193 |
Q |
| |
|
||||||||| |||||||| ||||| || || ||||| ||||| ||||| |||||||||||||||||||| ||||||| | || || | || ||| | |
|
|
| T |
8900632 |
gaaccttgtgaaaccaaaatgctacgattgattaacctagatgttagattatatgtagggatgtttttatgatgtgtaagaatatgaaaccctaattttg |
8900533 |
T |
 |
| Q |
194 |
ttgaggaaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatga |
293 |
Q |
| |
|
||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||| |||| || || |||||||| ||||| ||||| ||||| |
|
|
| T |
8900532 |
ttgag-aaaattgaaaatagtcgattttgtgaaaatagacaaactttgtcaaaatgaggttttgtgatcgaataacttgcaaatgaacttgtatgcatga |
8900434 |
T |
 |
| Q |
294 |
taacatg |
300 |
Q |
| |
|
||||||| |
|
|
| T |
8900433 |
taacatg |
8900427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 9637008 - 9637101
Alignment:
| Q |
69 |
aactttgagtttttaagaaaattaag-aaccttgtaaaaccaaattgctatgaatggttaactaagatggtagataatatgtagggatgttttt |
161 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| |||||||| || ||||| || |||||||||||| ||| | |||||||||||||||||| |
|
|
| T |
9637008 |
aactttgagtttttgagaaaattaaggaaccttgtgaaaccaaaatgttatgattgattaactaagatgttaggtgatatgtagggatgttttt |
9637101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 14305961 - 14306026
Alignment:
| Q |
226 |
aaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacat |
291 |
Q |
| |
|
||||||||||||||||||||||| || ||||||| || |||||||| |||||||||||||||||| |
|
|
| T |
14305961 |
aaatagacaaactttgtcaaaataagattttatgatcggataacttgcaaatggctttgtaaacat |
14306026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 19977897 - 19977975
Alignment:
| Q |
226 |
aaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaa |
304 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||| ||| |||| ||| ||||| ||||| ||| ||||||| ||||||| |
|
|
| T |
19977897 |
aaataaacgaactttgtcaaaatgagtttttatgatcaaataatttgcaaatgactttgaaaatatgataatatggtaa |
19977975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 21093740 - 21093834
Alignment:
| Q |
226 |
aaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatcaa |
320 |
Q |
| |
|
||||||| ||||||||||||||||| |||| || | |||||||| || |||||||||| ||||||||||||||| | |||| ||| |||||| |
|
|
| T |
21093740 |
aaatagatgaactttgtcaaaatgaggttttctgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaa |
21093834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 333
Target Start/End: Original strand, 10711101 - 10711238
Alignment:
| Q |
197 |
aggaaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataa |
296 |
Q |
| |
|
|||||||||| ||||||| ||||||||| |||||||| | ||| | |||||||| |||||| | |||||||| || ||| ||| || |||||||| |
|
|
| T |
10711101 |
aggaaaattggaaataggagattttgtgaaaatagacgagcttaggtaaaatgagggtttatgatttaataacttgcaattggttttatattcatgataa |
10711200 |
T |
 |
| Q |
297 |
catggtaacataataatgaatcaatgttt-attggtgt |
333 |
Q |
| |
|
|||| | | |||| || |||||||||||| |||||||| |
|
|
| T |
10711201 |
catgatgaaataagaaggaatcaatgtttgattggtgt |
10711238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 19977714 - 19977778
Alignment:
| Q |
26 |
attaggagtgaaattagttttgaaagaagttaaaaatgagacgaactttgagtttttaagaaaat |
90 |
Q |
| |
|
||||||| ||||||| |||||||| | ||||||||| ||| |||||||||||||| ||||||| |
|
|
| T |
19977714 |
attaggattgaaattgattttgaaacatgttaaaaataagaataactttgagtttttgagaaaat |
19977778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 295
Target Start/End: Original strand, 14486642 - 14486843
Alignment:
| Q |
94 |
gaaccttgtaaaaccaaattgctatgaatggttaactaagatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttgg |
193 |
Q |
| |
|
||||||||| |||| || |||||||| || ||| | ||||| ||||| |||||||||||||| || || ||||||| | ||||||| |||||| | |
|
|
| T |
14486642 |
gaaccttgtgaaacgaatatgctatgattgattaccctagatgttagatgatatgtagggatgtcttgatgatgtgtaagaatatggaatcctacttttg |
14486741 |
T |
 |
| Q |
194 |
ttgaggaaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatga |
293 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||| |||||||| |||||||||||||||| |||||||| |||||||| |||||| |||||| ||||| |
|
|
| T |
14486742 |
ttgagaaaaatcgaaaataggtgattttgtgaaaatagacgaactttgtcaaaatgaaggtttatggttgaataacttgcaaatggttttgtattcatga |
14486841 |
T |
 |
| Q |
294 |
ta |
295 |
Q |
| |
|
|| |
|
|
| T |
14486842 |
ta |
14486843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 23089731 - 23089913
Alignment:
| Q |
139 |
agataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggcgattttgtgcaaatagacaaact |
238 |
Q |
| |
|
|||| |||||||||||||| ||||| || |||| | |||||| ||| ||||| ||| ||||||||||||||||||| ||||||| |||||| | |||| |
|
|
| T |
23089731 |
agatgatatgtagggatgtatttatgcttcgtaagaacttggagtcacacttttgtttaggaaaattgaaaataggctattttgtaaaaatagtcgaact |
23089830 |
T |
 |
| Q |
239 |
ttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatcaatg |
322 |
Q |
| |
|
| ||||||||||| |||||| | |||||||| ||||| |||||||| ||| |||| ||| || |||| |||||||||||| |
|
|
| T |
23089831 |
tggtcaaaatgag-gtttatgattgtataacttgcaaatgactttgtaatcataataatatgatagaataagaatgaatcaatg |
23089913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 322
Target Start/End: Original strand, 21746590 - 21746712
Alignment:
| Q |
200 |
aaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacat |
299 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| ||||| ||||||||||| ||||||| || |||||||| |||||| ||||| |||||||||||| |
|
|
| T |
21746590 |
aaaattgaaaattggcgattttaacaaaatagacgaacttagtcaaaatgaggttttatgatcggataacttgcaaatggttttgtgtacatgataacat |
21746689 |
T |
 |
| Q |
300 |
ggtaacataataatgaatcaatg |
322 |
Q |
| |
|
||| | ||| |||||||||||| |
|
|
| T |
21746690 |
ggtgaattaaaaatgaatcaatg |
21746712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 330
Target Start/End: Complemental strand, 14634055 - 14633925
Alignment:
| Q |
200 |
aaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacat |
299 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| ||||||| ||||||||| |||||| | || |||| |||||| ||| ||| |||||||| || |
|
|
| T |
14634055 |
aaaattggaaataggcgattttgtgaaaatagacgaactttgccaaaatgagggtttatgcttttttatcttgaaaatggttttataatcatgataatat |
14633956 |
T |
 |
| Q |
300 |
ggtaacataataatgaatcaatgtttattgg |
330 |
Q |
| |
|
| | |||| ||||||||||||||| |||| |
|
|
| T |
14633955 |
gaggaaataagaatgaatcaatgtttgttgg |
14633925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 12465497 - 12465599
Alignment:
| Q |
220 |
ttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatca |
319 |
Q |
| |
|
||||| |||||||| |||||||||||||||| |||||||||| ||||||||||| || |||||| |||||| | ||| || |||| ||||||||| |
|
|
| T |
12465497 |
ttgtgaaaatagacgaactttgtcaaaatgatgttttatggtcgaataacttgtaattgattttgtattcatgatgatatgatagaataagaatgaatca |
12465596 |
T |
 |
| Q |
320 |
atg |
322 |
Q |
| |
|
||| |
|
|
| T |
12465597 |
atg |
12465599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 132 - 321
Target Start/End: Original strand, 23153816 - 23154005
Alignment:
| Q |
132 |
agatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggcgattttgtgcaaatag |
231 |
Q |
| |
|
||||| ||||| ||||||||||||||||| || | | || || ||||||||||||| ||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
23153816 |
agatgatagatgatatgtagggatgttttcatgatatttagtaatatggaatcatacttatgttgaataaaattgaaaatgaacgattttgtgaaaatag |
23153915 |
T |
 |
| Q |
232 |
acaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatcaat |
321 |
Q |
| |
|
|| |||||| |||||||||| ||||||| || |||||||| |||||||||||||| ||| |||| | | || |||| ||||||||||| |
|
|
| T |
23153916 |
acgaactttatcaaaatgaggttttatgatcggataacttgcaaatggctttgtaatcataataataggatagaataagaatgaatcaat |
23154005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 132 - 321
Target Start/End: Original strand, 23565073 - 23565262
Alignment:
| Q |
132 |
agatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggcgattttgtgcaaatag |
231 |
Q |
| |
|
||||| ||||| ||||||||||||||||| || | | || || ||||||||||||| ||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
23565073 |
agatgatagatgatatgtagggatgttttcatgatatttagtaatatggaatcatacttatgttgaataaaattgaaaatgaacgattttgtgaaaatag |
23565172 |
T |
 |
| Q |
232 |
acaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatcaat |
321 |
Q |
| |
|
|| |||||| |||||||||| ||||||| || |||||||| |||||||||||||| ||| |||| | | || |||| ||||||||||| |
|
|
| T |
23565173 |
acgaactttatcaaaatgaggttttatgatcggataacttgcaaatggctttgtaatcataataataggatagaataagaatgaatcaat |
23565262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 320
Target Start/End: Original strand, 39668284 - 39668465
Alignment:
| Q |
138 |
tagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggcgattttgtgcaaatagacaaac |
237 |
Q |
| |
|
||||| ||||||||||| ||||| || |||| || | |||| ||| |||||| |||||| |||| ||||||| ||||||||||| ||||||| ||| |
|
|
| T |
39668284 |
tagatgatatgtagggaggttttaatgatgtgcaagaacttgagatcctacttttgttgagaaaaagggaaaataagcgattttgtgaaaatagattaac |
39668383 |
T |
 |
| Q |
238 |
tttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatcaa |
320 |
Q |
| |
|
||| ||||||| || ||||| | || |||||| | |||||| |||||| |||||| ||||| | | |||| |||||||||| |
|
|
| T |
39668384 |
ttt-tcaaaatcaggttttaagatcgaataactagcaaatggttttgtattcatgattacatgatgaaataagaatgaatcaa |
39668465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1924 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1924
Description:
Target: scaffold1924; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 272 - 386
Alignment:
| Q |
186 |
tactttggttgaggaaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgt |
285 |
Q |
| |
|
|||||| ||||||||||||| |||||| | |||||||| |||||||| ||||||||||||||||| ||||||| || |||||||| ||| | |||| | |
|
|
| T |
272 |
tacttttgttgaggaaaatttcaaatagacaattttgtgaaaatagacgaactttgtcaaaatgaggttttatgatcgaataacttgcaaacgactttat |
371 |
T |
 |
| Q |
286 |
aaacatgataacatg |
300 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
372 |
gaacatgataacatg |
386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 297
Target Start/End: Original strand, 30190269 - 30190373
Alignment:
| Q |
193 |
gttgaggaaaattgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatg |
292 |
Q |
| |
|
||||||| |||||| |||||| ||||||| || |||||||| ||||| ||||||||| | ||||||| ||| |||||||| |||| |||||| |||||| |
|
|
| T |
30190269 |
gttgagggaaattggaaatagacgattttatgaaaatagacgaacttcgtcaaaatggggttttatgatcagataacttgcaaattactttgtgaacatg |
30190368 |
T |
 |
| Q |
293 |
ataac |
297 |
Q |
| |
|
||||| |
|
|
| T |
30190369 |
ataac |
30190373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 22806939 - 22806895
Alignment:
| Q |
207 |
aaaataggcgattttgtgcaaatagacaaactttgtcaaaatgag |
251 |
Q |
| |
|
|||||||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
22806939 |
aaaataggcgattttgtgaaaatatacgaactttgtcaaaatgag |
22806895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0126 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0126
Description:
Target: scaffold0126; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 302
Target Start/End: Original strand, 33972 - 34069
Alignment:
| Q |
205 |
tgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggt |
302 |
Q |
| |
|
|||||||||| ||||||||| ||||||| |||||||||||||| | |||||| || |||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
33972 |
tgaaaataggtgattttgtgaaaatagatgaactttgtcaaaataaatctttatgatcttataacttgcacatgactttgtaaacatgataacatggt |
34069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0111 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0111
Description:
Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 36009 - 35944
Alignment:
| Q |
94 |
gaaccttgtaaaaccaaattgctatgaatggttaactaagatggtagataatatgtagggatgttt |
159 |
Q |
| |
|
||||||||| |||||||| |||||||| || |||||||||||| ||||| |||||||||||||||| |
|
|
| T |
36009 |
gaaccttgtgaaaccaaaatgctatgattgattaactaagatgttagatgatatgtagggatgttt |
35944 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0115 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0115
Description:
Target: scaffold0115; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 40612 - 40654
Alignment:
| Q |
217 |
attttgtgcaaatagacaaactttgtcaaaatgagcttttatg |
259 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
40612 |
attttgtgaaaatagacaaactttgtcaaaatgagcttttatg |
40654 |
T |
 |
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Target: scaffold0086 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0086
Description:
Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 10607 - 10675
Alignment:
| Q |
265 |
ataacttgtaaatggctttgtaaacatgataacatggtaacataataatgaatcaatgtttattggtgt |
333 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || | |||| || ||||||||| || ||||||| |
|
|
| T |
10607 |
ataacttgcaaatggctttgtaaacatgataacatagtgaaataagaaggaatcaatgattgttggtgt |
10675 |
T |
 |
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Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 295
Target Start/End: Complemental strand, 24370014 - 24369923
Alignment:
| Q |
204 |
ttgaaaataggcgattttgtgcaaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgata |
295 |
Q |
| |
|
|||||||| ||| |||||||| |||||||| | |||| | ||||||| ||||||| || |||| ||||||||||||||||| |||||||| |
|
|
| T |
24370014 |
ttgaaaatcggcaattttgtgaaaatagacgagctttattgaaatgaggttttatgatcggataatttgtaaatggctttgtatacatgata |
24369923 |
T |
 |
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Target: scaffold0135 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0135
Description:
Target: scaffold0135; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 31695 - 31554
Alignment:
| Q |
116 |
tatgaatggttaactaagatggtagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggc |
215 |
Q |
| |
|
||||| || |||||||||||| ||||| ||| |||||||||| || || | ||||| | ||||||||| || |||||||| | ||||||||| || | |
|
|
| T |
31695 |
tatgattgattaactaagatgttagatgatacgtagggatgtcttaatggtatgtaagaacttggaatcctaatttggttg-gtaaaattgaatattgtt |
31597 |
T |
 |
| Q |
216 |
gattttgtgcaaatagacaaactttgtcaaaatgagcttttat |
258 |
Q |
| |
|
|||||| || |||||||| |||||||| ||||||| |||||| |
|
|
| T |
31596 |
gattttatgaaaatagactaactttgttgaaatgaggttttat |
31554 |
T |
 |
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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0171
Description:
Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 3846 - 3733
Alignment:
| Q |
138 |
tagataatatgtagggatgtttttatactgtgtaatagcttggaatcatactttggttgaggaaaattgaaaataggcgattttgtgcaaatagacaaac |
237 |
Q |
| |
|
||||| ||||||||| ||||||| || ||||||| ||||| | ||| |||||| || ||||||||||||||| | |||||| | |||||||| ||| |
|
|
| T |
3846 |
tagatgatatgtaggaatgttttgatgatgtgtaagagcttagtatcctactttttttttagaaaattgaaaatagacaattttgggaaaatagacgaac |
3747 |
T |
 |
| Q |
238 |
tttgtcaaaatgag |
251 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
3746 |
tttatcaaaatgag |
3733 |
T |
 |
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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0123
Description:
Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 34455 - 34423
Alignment:
| Q |
264 |
cataacttgtaaatggctttgtaaacatgataa |
296 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |
|
|
| T |
34455 |
cataacttgtaaatggatttgtaaacatgataa |
34423 |
T |
 |
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