View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13314_high_48 (Length: 212)
Name: NF13314_high_48
Description: NF13314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13314_high_48 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 1006991 - 1007180
Alignment:
| Q |
1 |
aacaaaaattgaaaaggaatagaataataataatacctagagagttgacatctgaagagggatttggaagcggaatgtgaatgtgaattgaaggaagaac |
100 |
Q |
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| T |
1006991 |
aacaaaaattgaaaaggaatagaagaata---atacctagagagttgacatctgaagagggatttggaagcggaatgtgaatgtgaattgaaggaagaac |
1007087 |
T |
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| Q |
101 |
ggtggcgacattaggggttacatttggtgaatcatcagaagaagaagaatctgatacatcaatttcatcttcatcccatggaaatggcctctt |
193 |
Q |
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| T |
1007088 |
ggtggcgacattaggggtttcatttggtgaatcatcagaagaagaagaatctgatacatcaatttcatcttcatcccatggaaatggcctctt |
1007180 |
T |
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