View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13314_low_26 (Length: 372)

Name: NF13314_low_26
Description: NF13314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13314_low_26
NF13314_low_26
[»] chr1 (48 HSPs)
chr1 (174-354)||(40810944-40811124)
chr1 (15-116)||(40811192-40811293)
chr1 (15-117)||(24516330-24516432)
chr1 (17-117)||(36511351-36511451)
chr1 (26-117)||(40110681-40110772)
chr1 (32-117)||(14765129-14765214)
chr1 (17-117)||(40109357-40109457)
chr1 (17-117)||(51726864-51726964)
chr1 (17-116)||(36509809-36509907)
chr1 (32-114)||(26803251-26803333)
chr1 (15-97)||(22167795-22167877)
chr1 (26-116)||(24517643-24517733)
chr1 (17-117)||(40812631-40812729)
chr1 (16-117)||(51725339-51725440)
chr1 (17-117)||(8092594-8092694)
chr1 (17-117)||(14169615-14169715)
chr1 (17-117)||(19464596-19464696)
chr1 (17-97)||(19466225-19466305)
chr1 (17-117)||(26801939-26802039)
chr1 (32-117)||(38280846-38280931)
chr1 (22-115)||(45570317-45570409)
chr1 (17-97)||(14764245-14764325)
chr1 (41-117)||(43808565-43808641)
chr1 (54-116)||(21246532-21246594)
chr1 (41-115)||(43807433-43807507)
chr1 (17-117)||(3978040-3978140)
chr1 (17-73)||(3979333-3979389)
chr1 (17-97)||(13641273-13641353)
chr1 (16-116)||(13929292-13929392)
chr1 (15-117)||(25785964-25786066)
chr1 (58-115)||(22169280-22169337)
chr1 (41-117)||(30743083-30743159)
chr1 (35-97)||(34653451-34653513)
chr1 (45-115)||(45042607-45042677)
chr1 (17-115)||(50679841-50679939)
chr1 (17-70)||(49141516-49141569)
chr1 (17-117)||(14071223-14071323)
chr1 (17-117)||(25787184-25787284)
chr1 (41-117)||(38283783-38283859)
chr1 (17-117)||(47411468-47411568)
chr1 (16-55)||(13642576-13642615)
chr1 (17-116)||(26056167-26056266)
chr1 (17-63)||(21277044-21277090)
chr1 (19-117)||(35683051-35683149)
chr1 (17-73)||(9592278-9592334)
chr1 (17-97)||(13930695-13930775)
chr1 (17-117)||(47410980-47411080)
chr1 (17-117)||(47560135-47560235)
[»] chr5 (51 HSPs)
chr5 (17-116)||(22819569-22819668)
chr5 (17-117)||(12830958-12831058)
chr5 (17-117)||(12862938-12863038)
chr5 (15-117)||(32735497-32735599)
chr5 (17-117)||(42510110-42510210)
chr5 (17-97)||(24761741-24761821)
chr5 (17-117)||(32734129-32734227)
chr5 (17-103)||(15857638-15857724)
chr5 (41-117)||(11907205-11907281)
chr5 (18-117)||(42511687-42511786)
chr5 (41-117)||(39135692-39135768)
chr5 (26-97)||(8188229-8188300)
chr5 (17-97)||(12933767-12933847)
chr5 (17-117)||(18677972-18678072)
chr5 (41-117)||(24070401-24070477)
chr5 (58-117)||(12861545-12861604)
chr5 (17-96)||(40058035-40058114)
chr5 (41-115)||(39134665-39134739)
chr5 (26-115)||(224619-224708)
chr5 (17-117)||(5384366-5384466)
chr5 (24-116)||(8187164-8187254)
chr5 (54-114)||(11906354-11906414)
chr5 (58-117)||(12829566-12829625)
chr5 (54-117)||(23679143-23679206)
chr5 (54-117)||(23855606-23855669)
chr5 (17-115)||(22812407-22812505)
chr5 (58-115)||(22818158-22818215)
chr5 (16-97)||(40059347-40059428)
chr5 (17-97)||(7426657-7426737)
chr5 (17-97)||(12947928-12948008)
chr5 (17-117)||(19525308-19525408)
chr5 (26-117)||(30253582-30253673)
chr5 (19-117)||(15510285-15510383)
chr5 (17-63)||(15856584-15856629)
chr5 (17-73)||(1663227-1663283)
chr5 (15-59)||(2167532-2167576)
chr5 (17-116)||(1273086-1273185)
chr5 (66-117)||(7427993-7428044)
chr5 (17-68)||(18695667-18695718)
chr5 (17-96)||(19827160-19827239)
chr5 (32-95)||(26403325-26403388)
chr5 (17-63)||(15613555-15613601)
chr5 (19-73)||(21387677-21387731)
chr5 (27-73)||(26404240-26404286)
chr5 (17-117)||(21389163-21389261)
chr5 (41-97)||(8284288-8284344)
chr5 (17-97)||(12936122-12936202)
chr5 (41-97)||(19523999-19524055)
chr5 (41-117)||(21006136-21006212)
chr5 (41-117)||(21011852-21011928)
chr5 (41-117)||(24071487-24071562)
[»] chr3 (54 HSPs)
chr3 (16-117)||(43346466-43346567)
chr3 (17-117)||(23559815-23559915)
chr3 (17-116)||(12062404-12062503)
chr3 (17-97)||(21127941-21128021)
chr3 (17-117)||(23561145-23561245)
chr3 (36-117)||(7921682-7921763)
chr3 (34-117)||(48867467-48867550)
chr3 (17-117)||(35173143-35173243)
chr3 (37-117)||(39530791-39530871)
chr3 (17-116)||(12060656-12060754)
chr3 (41-117)||(1031812-1031888)
chr3 (25-117)||(43345315-43345407)
chr3 (17-117)||(51401371-51401471)
chr3 (17-96)||(48866158-48866237)
chr3 (25-97)||(35174410-35174482)
chr3 (41-117)||(50150717-50150793)
chr3 (54-117)||(46690351-46690414)
chr3 (39-117)||(32999793-32999871)
chr3 (41-117)||(2088838-2088914)
chr3 (41-117)||(33000844-33000920)
chr3 (41-117)||(45730633-45730709)
chr3 (17-117)||(54653986-54654086)
chr3 (41-117)||(4067922-4067998)
chr3 (17-97)||(25583130-25583210)
chr3 (41-101)||(38639030-38639090)
chr3 (41-97)||(39531860-39531916)
chr3 (17-117)||(42632702-42632802)
chr3 (17-117)||(47855358-47855458)
chr3 (17-95)||(32980472-32980550)
chr3 (15-117)||(42633904-42634006)
chr3 (17-97)||(8371236-8371316)
chr3 (17-117)||(11220678-11220778)
chr3 (17-73)||(47806858-47806914)
chr3 (17-73)||(51825641-51825697)
chr3 (41-117)||(53901565-53901641)
chr3 (18-97)||(10987674-10987753)
chr3 (30-117)||(23886696-23886783)
chr3 (19-117)||(19579316-19579414)
chr3 (19-117)||(32973135-32973233)
chr3 (19-117)||(32974245-32974343)
chr3 (27-117)||(41386126-41386216)
chr3 (17-95)||(49122022-49122100)
chr3 (32-97)||(8372651-8372716)
chr3 (36-117)||(17350141-17350222)
chr3 (17-94)||(19253022-19253099)
chr3 (32-117)||(41387468-41387553)
chr3 (17-73)||(11219470-11219526)
chr3 (25-73)||(29536754-29536802)
chr3 (23-63)||(32979138-32979178)
chr3 (17-101)||(47766971-47767054)
chr3 (18-66)||(47808127-47808175)
chr3 (17-73)||(48252973-48253029)
chr3 (41-97)||(50765818-50765874)
chr3 (41-117)||(53342712-53342788)
[»] chr7 (50 HSPs)
chr7 (17-117)||(4167447-4167547)
chr7 (27-117)||(10257416-10257506)
chr7 (17-117)||(132019-132119)
chr7 (17-117)||(35315242-35315342)
chr7 (19-97)||(4168871-4168949)
chr7 (25-95)||(10256141-10256211)
chr7 (41-117)||(35483569-35483646)
chr7 (25-117)||(46457066-46457158)
chr7 (22-115)||(35484335-35484428)
chr7 (17-117)||(27899234-27899334)
chr7 (41-117)||(40881087-40881163)
chr7 (41-117)||(47537084-47537160)
chr7 (54-117)||(29344160-29344223)
chr7 (17-95)||(24873617-24873695)
chr7 (45-95)||(29409286-29409336)
chr7 (36-117)||(13287033-13287114)
chr7 (17-117)||(19278349-19278449)
chr7 (17-117)||(25153654-25153754)
chr7 (17-73)||(26406165-26406221)
chr7 (17-97)||(46674954-46675034)
chr7 (41-117)||(47927375-47927451)
chr7 (16-115)||(25154955-25155054)
chr7 (18-117)||(43006381-43006480)
chr7 (24-117)||(4858371-4858464)
chr7 (37-102)||(33071678-33071743)
chr7 (32-116)||(18802424-18802508)
chr7 (41-117)||(37781953-37782029)
chr7 (17-73)||(46458733-46458789)
chr7 (17-95)||(22746340-22746418)
chr7 (57-95)||(29408264-29408302)
chr7 (32-97)||(27897708-27897773)
chr7 (24-77)||(45719651-45719704)
chr7 (41-117)||(12631879-12631953)
chr7 (32-116)||(19279647-19279731)
chr7 (17-97)||(22061815-22061895)
chr7 (17-117)||(36702773-36702873)
chr7 (41-117)||(47928474-47928550)
chr7 (15-54)||(13446676-13446715)
chr7 (26-97)||(17288249-17288320)
chr7 (41-95)||(29345122-29345176)
chr7 (17-63)||(43935235-43935281)
chr7 (32-117)||(18801211-18801296)
chr7 (32-73)||(19848869-19848910)
chr7 (17-97)||(4857217-4857297)
chr7 (17-117)||(22744742-22744842)
chr7 (17-117)||(33458306-33458405)
chr7 (17-97)||(40926539-40926619)
chr7 (17-97)||(43930335-43930415)
chr7 (32-100)||(45721801-45721869)
chr7 (17-73)||(48671118-48671173)
[»] scaffold0098 (2 HSPs)
scaffold0098 (17-117)||(42366-42465)
scaffold0098 (52-115)||(40914-40977)
[»] chr8 (56 HSPs)
chr8 (17-117)||(8095343-8095442)
chr8 (26-117)||(22619891-22619982)
chr8 (26-117)||(22621163-22621254)
chr8 (17-117)||(13367070-13367170)
chr8 (27-117)||(34616125-34616215)
chr8 (17-115)||(41522708-41522806)
chr8 (16-117)||(34617214-34617315)
chr8 (37-117)||(22913188-22913268)
chr8 (17-97)||(24069466-24069546)
chr8 (17-96)||(20308622-20308701)
chr8 (17-96)||(21095255-21095334)
chr8 (41-117)||(9190486-9190561)
chr8 (15-97)||(2421311-2421393)
chr8 (15-117)||(37276261-37276363)
chr8 (17-117)||(8096565-8096665)
chr8 (41-117)||(9189390-9189466)
chr8 (45-117)||(35463037-35463109)
chr8 (54-117)||(12818750-12818813)
chr8 (17-96)||(39220696-39220775)
chr8 (54-116)||(23768542-23768604)
chr8 (42-116)||(45195849-45195922)
chr8 (37-117)||(22914230-22914310)
chr8 (17-73)||(36070218-36070274)
chr8 (17-117)||(38591027-38591127)
chr8 (41-97)||(41521333-41521389)
chr8 (25-117)||(43386730-43386822)
chr8 (58-117)||(2419870-2419929)
chr8 (54-117)||(12820155-12820218)
chr8 (45-95)||(35462685-35462735)
chr8 (15-117)||(43275746-43275848)
chr8 (41-117)||(4534030-4534106)
chr8 (41-97)||(16346115-16346171)
chr8 (17-117)||(24068326-24068426)
chr8 (17-117)||(29738287-29738387)
chr8 (45-117)||(31872852-31872924)
chr8 (17-117)||(36940053-36940153)
chr8 (17-117)||(39546697-39546797)
chr8 (19-101)||(7796829-7796911)
chr8 (17-95)||(19914926-19915004)
chr8 (15-117)||(31623902-31624004)
chr8 (17-63)||(37274937-37274983)
chr8 (17-98)||(31625404-31625485)
chr8 (32-97)||(41866910-41866975)
chr8 (19-99)||(7770919-7770999)
chr8 (19-99)||(7816110-7816190)
chr8 (17-73)||(29739663-29739719)
chr8 (17-97)||(39515215-39515295)
chr8 (18-117)||(41867937-41868036)
chr8 (15-97)||(117064-117146)
chr8 (17-73)||(7486117-7486173)
chr8 (17-97)||(16363832-16363912)
chr8 (17-117)||(35945457-35945557)
chr8 (16-96)||(36071397-36071477)
chr8 (17-117)||(38589817-38589916)
chr8 (15-99)||(38789064-38789148)
chr8 (17-97)||(43277941-43278021)
[»] chr4 (55 HSPs)
chr4 (17-117)||(50531776-50531876)
chr4 (26-117)||(41348235-41348326)
chr4 (19-117)||(43419397-43419495)
chr4 (17-117)||(38417549-38417649)
chr4 (26-117)||(41349554-41349645)
chr4 (27-117)||(6138993-6139083)
chr4 (17-117)||(34438402-34438502)
chr4 (15-117)||(44159081-44159183)
chr4 (17-117)||(34439680-34439780)
chr4 (17-115)||(38419037-38419135)
chr4 (17-117)||(17319038-17319138)
chr4 (25-97)||(50530519-50530591)
chr4 (41-117)||(11482792-11482868)
chr4 (62-117)||(44160475-44160530)
chr4 (17-97)||(26393147-26393227)
chr4 (17-117)||(33377384-33377484)
chr4 (41-117)||(43418029-43418105)
chr4 (54-117)||(26045128-26045191)
chr4 (54-117)||(47573701-47573764)
chr4 (16-117)||(15786948-15787049)
chr4 (37-97)||(5417320-5417380)
chr4 (17-117)||(11113738-11113838)
chr4 (17-117)||(11115000-11115100)
chr4 (41-117)||(43708832-43708908)
chr4 (17-117)||(56000283-56000383)
chr4 (17-99)||(15787522-15787604)
chr4 (41-115)||(50498016-50498090)
chr4 (17-73)||(28103506-28103562)
chr4 (17-73)||(29663683-29663738)
chr4 (19-115)||(30683049-30683145)
chr4 (41-117)||(43709918-43709993)
chr4 (41-97)||(47242968-47243024)
chr4 (41-117)||(47572583-47572658)
chr4 (41-117)||(50496991-50497067)
chr4 (17-68)||(5687220-5687271)
chr4 (27-117)||(37560329-37560419)
chr4 (32-117)||(37558994-37559079)
chr4 (17-101)||(21104330-21104414)
chr4 (17-117)||(27408759-27408859)
chr4 (17-117)||(46796046-46796146)
chr4 (54-117)||(47244047-47244110)
chr4 (41-95)||(17494145-17494199)
chr4 (19-117)||(29834454-29834552)
chr4 (15-117)||(47668615-47668717)
chr4 (26-63)||(307834-307871)
chr4 (36-117)||(38371844-38371925)
chr4 (22-63)||(44302770-44302811)
chr4 (32-117)||(56001303-56001388)
chr4 (25-97)||(3533636-3533708)
chr4 (54-117)||(26059842-26059903)
chr4 (17-117)||(31711088-31711188)
chr4 (25-73)||(40146651-40146699)
chr4 (41-117)||(48413595-48413671)
chr4 (17-117)||(52658907-52659007)
chr4 (17-97)||(55953872-55953952)
[»] chr2 (39 HSPs)
chr2 (17-117)||(14510529-14510629)
chr2 (26-117)||(25570899-25570990)
chr2 (17-117)||(7983715-7983814)
chr2 (17-117)||(14509205-14509305)
chr2 (23-117)||(15850685-15850779)
chr2 (17-117)||(3533646-3533746)
chr2 (36-117)||(15850108-15850189)
chr2 (41-117)||(7982308-7982384)
chr2 (27-98)||(7490225-7490296)
chr2 (27-97)||(3532210-3532280)
chr2 (15-117)||(25569765-25569867)
chr2 (58-117)||(8538686-8538745)
chr2 (16-115)||(10368404-10368503)
chr2 (23-117)||(12854130-12854224)
chr2 (41-115)||(33553409-33553483)
chr2 (17-97)||(35801065-35801145)
chr2 (17-117)||(42246587-42246687)
chr2 (17-68)||(7037011-7037062)
chr2 (31-117)||(7038366-7038452)
chr2 (41-103)||(20630715-20630777)
chr2 (17-63)||(23177724-23177770)
chr2 (17-63)||(23588981-23589027)
chr2 (35-117)||(37867752-37867834)
chr2 (17-94)||(2581822-2581899)
chr2 (17-117)||(4829461-4829561)
chr2 (17-117)||(6706922-6707022)
chr2 (17-101)||(10367251-10367335)
chr2 (17-73)||(11386664-11386720)
chr2 (17-101)||(12959725-12959809)
chr2 (17-97)||(37869060-37869140)
chr2 (34-97)||(41795989-41796052)
chr2 (30-117)||(42772434-42772521)
chr2 (19-73)||(2305580-2305634)
chr2 (57-103)||(30178555-30178601)
chr2 (36-97)||(8537028-8537089)
chr2 (32-73)||(12958456-12958497)
chr2 (25-73)||(12852926-12852974)
chr2 (17-97)||(32614401-32614481)
chr2 (17-97)||(35799528-35799608)
[»] scaffold0122 (2 HSPs)
scaffold0122 (24-117)||(17187-17280)
scaffold0122 (52-117)||(15946-16011)
[»] chr6 (26 HSPs)
chr6 (17-117)||(14328794-14328893)
chr6 (17-117)||(14421804-14421903)
chr6 (25-116)||(14326150-14326241)
chr6 (25-116)||(14419160-14419251)
chr6 (27-117)||(13800027-13800117)
chr6 (41-117)||(1757538-1757614)
chr6 (50-112)||(16269821-16269883)
chr6 (57-117)||(5693647-5693707)
chr6 (17-95)||(31740292-31740370)
chr6 (17-97)||(22299923-22300003)
chr6 (17-117)||(31738359-31738459)
chr6 (17-97)||(33807705-33807785)
chr6 (17-115)||(27438788-27438886)
chr6 (32-117)||(9927602-9927687)
chr6 (24-117)||(33802044-33802137)
chr6 (17-117)||(8412336-8412436)
chr6 (41-117)||(27107177-27107253)
chr6 (54-102)||(27108231-27108279)
chr6 (41-117)||(27148983-27149059)
chr6 (54-102)||(27150028-27150076)
chr6 (17-117)||(27440195-27440295)
chr6 (42-117)||(1692070-1692145)
chr6 (15-117)||(18139505-18139607)
chr6 (54-101)||(1693038-1693085)
chr6 (16-55)||(22298662-22298701)
chr6 (17-117)||(5311275-5311375)
[»] scaffold0166 (1 HSPs)
scaffold0166 (17-97)||(4238-4318)
[»] scaffold1974 (1 HSPs)
scaffold1974 (17-117)||(648-748)
[»] scaffold1878 (1 HSPs)
scaffold1878 (17-117)||(526-626)
[»] scaffold0290 (1 HSPs)
scaffold0290 (17-117)||(9498-9598)
[»] scaffold0041 (1 HSPs)
scaffold0041 (41-117)||(85120-85196)
[»] scaffold0046 (1 HSPs)
scaffold0046 (25-117)||(23402-23494)
[»] scaffold0009 (2 HSPs)
scaffold0009 (41-117)||(205596-205672)
scaffold0009 (55-117)||(204532-204593)
[»] scaffold0003 (2 HSPs)
scaffold0003 (17-115)||(48476-48574)
scaffold0003 (17-117)||(47066-47166)
[»] scaffold0013 (1 HSPs)
scaffold0013 (17-117)||(96156-96256)
[»] scaffold0084 (1 HSPs)
scaffold0084 (19-97)||(13226-13304)
[»] scaffold0178 (1 HSPs)
scaffold0178 (25-117)||(2293-2385)
[»] scaffold0025 (1 HSPs)
scaffold0025 (17-97)||(56720-56800)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 6e-93; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 174 - 354
Target Start/End: Complemental strand, 40811124 - 40810944
Alignment:
Q  174 caccttcatttgtaagagctgaaatcacacaacaatttcaactattaagccaaaagctacgccttccgtttattcaaaactaaaatgtaaacatgaaaaa 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  40811124 caccttcatttgtaagagctgaaatcacacaacaatttcaactattaagccaaaagctacgtcttgcgtttattcaaaactaaaatgtaaacatgaaaaa 40811025  T
Q  274 gttactttgcacaaaaagcaactaccaggtgagcgtaacttcaaccaaagctttgaaacatgccctgttaatagctcagag 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811024 gttactttgcacaaaaagcaactaccaggtgagcgtaacttcaaccaaagctttgaaacatgccctgttaatagctcagag 40810944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 40811293 - 40811192
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||    
T  40811293 aataaacggcaaaagagttatgggatcaaattgagacatttaatagttaagggatcaaactgagaaaatagaataagttaagggaccgagggatgtatta 40811194  T
Q  115 ag 116  Q
    ||    
T  40811193 ag 40811192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 24516432 - 24516330
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    |||||||||  ||||| ||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  24516432 aataaacggaggaagacttatgagaccaaattgacacacttaatagttaagggatcaaactcagaaaataaaataagttaagggaccgggggatgtatta 24516333  T
Q  115 agc 117  Q
    |||    
T  24516332 agc 24516330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 36511351 - 36511451
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| || || ||||||||||||    
T  36511351 taaacgacagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgagaaaataaaataaattaagggactgggggatgtattaag 36511450  T
Q  117 c 117  Q
    |    
T  36511451 c 36511451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 40110681 - 40110772
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||    
T  40110681 gaagacttatgggaccaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaagggatcgagggatgtattaagc 40110772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 14765129 - 14765214
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||    
T  14765129 ttatgggaccaaattgacacacttaatagttaagggaccaaactgagaaaataaaataagttaaaggaccggagaatgtattaagc 14765214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 40109457 - 40109357
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||  ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||    
T  40109457 taaacggatgaagatttatgggaccaaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaagggatcgtgggatgtattaag 40109358  T
Q  117 c 117  Q
    |    
T  40109357 c 40109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 51726864 - 51726964
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||| | ||||||||||||||| ||||||||  || |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  51726864 taaacgacagaagatttatggaaccaaattgagacactttatagttaaatgaccaaactgagaaaataaaataagttaagggaccgggggatgtattaag 51726963  T
Q  117 c 117  Q
    |    
T  51726964 c 51726964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 36509907 - 36509809
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||| | |||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||    
T  36509907 taaacggcagaagatttatggaaccaaattgaaacactttatagttaagggaccaaactgagaaaataaaataagttaagggatc-gaggatgtattaag 36509809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 26803251 - 26803333
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  26803251 ttatggaatcaaattgacacacttaatagttaagagatcaaactgagaaaataaaataagttaagggaccggggaatgtatta 26803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 22167877 - 22167795
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||||| |||||||| |||||||| |||||||||| ||||||||  ||||||||||| |||||||||||||||    
T  22167877 aataaacggcagaagatttatgggaccaaattgaaacacttaatatttaagggactaaactgagaaattaaaataagttaagg 22167795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 24517643 - 24517733
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||| |||||||| |||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||    
T  24517643 gaagatttatgggaccaaattgacacacttaaaaattaagggattaaactgagaaaataaaataagttaagggaccgtgggatgtattaag 24517733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 40812631 - 40812729
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||| ||||||||||||||   | |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||  ||||||||||||    
T  40812631 taaatggcagaagagttatataaccaaattgagacacttaatagttaagggaccaaactaggaaaataaaataagttaagggaccg--ggatgtattaag 40812728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 51725440 - 51725339
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||||||||   |||| ||||||||||||||||||| |||||||| |||  ||||||||||| ||||||||||||||| ||||| |||| ||||||    
T  51725440 ataaacggcagaaattttataggatcaaattgagacactttatagttaaaggactaaactgagaaattaaaataagttaagggaccgggggatatattaa 51725341  T
Q  116 gc 117  Q
    ||    
T  51725340 gc 51725339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 8092694 - 8092594
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||  ||||| |||||| | |||||||| |||||||||||||||||||  | ||||||||||||||||||||||||| |||||  |||||||||||    
T  8092694 taaacggaggaagatttatggaaccaaattgatacacttaatagttaagggactacactgagaaaataaaataagttaagggaccgggagatgtattaag 8092595  T
Q  117 c 117  Q
    |    
T  8092594 c 8092594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 14169715 - 14169615
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| |||||||| |||||||||||| || |||||||| ||| |||||||||||||||||||||||||||| || || | ||||||||||    
T  14169715 taaacgacaaaagatttatgggaccaaattgagacattttatagttaaaggaccaaactgagaaaataaaataagttaagggactggggaatgtattaag 14169616  T
Q  117 c 117  Q
    |    
T  14169615 c 14169615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 19464696 - 19464596
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| || ||| | |||||||| |||||| ||| |||||||| |||||||| |||||||||||||||| ||||| || ||||||||||||    
T  19464696 taaacggcagaagatttgtggaaccaaattgaaacactttataattaagggaccaaactgaaaaaataaaataagttacggaactggtggatgtattaag 19464597  T
Q  117 c 117  Q
    |    
T  19464596 c 19464596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 19466225 - 19466305
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| ||||||| |||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||||| ||||    
T  19466225 taaacgacagaagatttatgggaccaaattgagacactttatagttaaaggaccaaactgagaaaataaaataagtaaagg 19466305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 26802039 - 26801939
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||  ||||| ||||| ||  ||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  26802039 taaacggaggaagacttatgagactaaatttacacacttaatagttaagggatcaaactgaaaaaataaaataagctaagagaccggaggatgtattaag 26801940  T
Q  117 c 117  Q
    |    
T  26801939 c 26801939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 38280931 - 38280846
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| || |||||||| ||| ||||||||||| ||| ||||||||||||||||||||| |||| | |||||||||||||||||||    
T  38280931 ttatgtgaccaaattgacacaattaatagttaatggaccaaactgagaaaataaaataacttaaaggaccggaggatgtattaagc 38280846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 45570409 - 45570317
Alignment:
Q  22 ggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    ||||||||||||||| || ||| |||||||| || |||||||||| | |||||||| ||||||||||||||||||| |||||| |||| |||||    
T  45570409 ggcagaagagttatgagaccaagttgagacatttgatagttaaggaaccaaactga-aaaataaaataagttaagggaccggatgatgcattaa 45570317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 14764325 - 14764245
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| ||||||| ||||| || |||||| | |||||||||| ||||||||||||||| | |||||||||||||||||||    
T  14764325 taaacgacagaagacttatgagaccaaattaacacacttaataattaagggatcaaactaaaaaaataaaataagttaagg 14764245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 43808565 - 43808641
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  ||||||||||||||| || ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  43808565 caaattgaaacgtttaatagttaagggaccacactgagaaattaaaataagttaagggaccgaaggatgtattaagc 43808641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 21246532 - 21246594
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| |||||  |||||||||||    
T  21246532 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaag 21246594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 43807507 - 43807433
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||| ||| ||||||||||| |||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  43807507 caaattgaaacatttaatagttaatggactaaactgagaaattaaaataagttaaaggaccggaggatgtattaa 43807433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 3978140 - 3978040
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| |||  | |||||||||||    
T  3978140 taaacgacagaagaattatgggatcaaattgagacactttatagttaaaggaccaaaatgaaattcaaaaataagttaagggaccaaatgatgtattaag 3978041  T
Q  117 c 117  Q
    |    
T  3978040 c 3978040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 3979333 - 3979389
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  3979333 taaacggcagaagaattatgggaccaaattgagacactttatagttaagggaccaaa 3979389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 13641353 - 13641273
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  13641353 taaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagg 13641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 13929392 - 13929292
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||| |||||| ||| |||| ||||||||||||||| |||||||||||| |||| ||| ||   |||||||||||||| |||  | ||||||||||    
T  13929392 ataaacggaagaagatttacgggaccaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 13929293  T
Q  116 g 116  Q
    |    
T  13929292 g 13929292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 25786066 - 25785964
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    |||||||| || |||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||    
T  25786066 aataaacgacataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtatta 25785967  T
Q  115 agc 117  Q
    |||    
T  25785966 agc 25785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 22169280 - 22169337
Alignment:
Q  58 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||  ||||||||||    
T  22169280 tagttaagggatcaaactgagaaattaaaataagttaagggactgggagatgtattaa 22169337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 30743159 - 30743083
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| ||||||||||||||| || | ||||||| ||||||||||||| | |||||  ||||||||||||    
T  30743159 caaattgaaacatttaatagttaagggaccacattgagaaattaaaataagttaaaggaccgggagatgtattaagc 30743083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 34653513 - 34653451
Alignment:
Q  35 tgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||||    
T  34653513 tgggatcaaattgagacactttatagttaagggaccaaagtgaaaaccgaaaataagttaagg 34653451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 45042677 - 45042607
Alignment:
Q  45 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||| |||| | |||   |||||||||||    
T  45042677 ttgaaacatttaacagttaagggatcaaactgagaaaataaaataaattaaaggaccaacggatgtattaa 45042607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 50679841 - 50679939
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||  ||||| |||||||| ||||||||||||||| |||||||||||| |||| | | ||   |||||||||||||| |||  || |||||||||    
T  50679841 taaacggaggaagacttatgggaccaaattgagacactttatagttaagggaccaaaataaaaactaaaaataagttaagggaccaaagcatgtattaa 50679939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 49141516 - 49141569
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatc 70  Q
    |||||||||||| | |||||||| ||| |||| |||||||||||||||||||||    
T  49141516 taaacggcagaaaaattatgggaccaatttgaaacacttaatagttaagggatc 49141569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 14071223 - 14071323
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||||| ||||||||||||||| |||||||  ||| |||| ||| ||   ||||||| |||||| |||  | |||||||||||    
T  14071223 taaacgacagaagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataaattaagggaccaaatgatgtattaag 14071322  T
Q  117 c 117  Q
    |    
T  14071323 c 14071323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 25787184 - 25787284
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||| |||| |||| ||||| || ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  25787184 taaatggcataagatttatgagaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 25787283  T
Q  117 c 117  Q
    |    
T  25787284 c 25787284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 38283783 - 38283859
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||||||||||| ||  |||  ||||||| ||||||||||||||||||| ||||| |  ||||||||||    
T  38283783 caaattgacacacttaatagatagaggactaaactgaaaaaataaaataagttaagggaccggggagtgtattaagc 38283859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 47411468 - 47411568
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||||||| || | ||||  || ||   |||||||||||||| |||  | |||||||||||    
T  47411468 taaacggcataagatttatgggaccaaattgagacactttatagttagggaaccaaatggaaaaccgaaaataagttaagggaccaaatgatgtattaag 47411567  T
Q  117 c 117  Q
    |    
T  47411568 c 47411568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 13642576 - 13642615
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacactt 55  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  13642576 ataaacggcagaatagttatgggatcaaactgagacactt 13642615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 26056167 - 26056266
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || ||||||||||    
T  26056167 taaacgacaaaagatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagggaccaaagtatgtattaag 26056266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 21277090 - 21277044
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    |||||||||||||| |||||||| |||||||||| |||| |||||||    
T  21277090 taaacggcagaagatttatgggaccaaattgagatactttatagtta 21277044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 35683149 - 35683051
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||  || |||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  35683149 aacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 35683051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 9592334 - 9592278
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||| || |||| ||||||||||||||||| |||||| ||||||| |||| ||||    
T  9592334 taaacgacaaaagatttatgggatcaaattgaaacactttatagttaggggaccaaa 9592278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 13930695 - 13930775
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| || |||| |||||||| ||||||||||||||| |||||||  ||| |||| ||| ||   ||||||||||||||    
T  13930695 taaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataagttaagg 13930775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 47411080 - 47410980
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| ||||| || ||||||||||||||| ||||||| ||||||||| ||| ||   ||||||| |||||| |||  |  ||||||||||    
T  47411080 taaacgacataagatttatgagaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataatttaagggaccaaattatgtattaag 47410981  T
Q  117 c 117  Q
    |    
T  47410980 c 47410980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 47560235 - 47560135
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||| | |||  |||||||||||| |||||| ||||||| |||| |||| ||| ||   |||||||| ||||| |||  | |||||||||||    
T  47560235 taaacggcagaatatttaaaggatcaaattgaaacactttatagttaggggaccaaagtgaaaatcgaaaataaggtaagggaccaaatgatgtattaag 47560136  T
Q  117 c 117  Q
    |    
T  47560135 c 47560135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 22819569 - 22819668
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||  |||||||||||    
T  22819569 taaacggcagaagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaaggggccgggagatgtattaag 22819668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 12830958 - 12831058
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||    
T  12830958 taaacagcagaagagttataggaccaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggaccgagagatgtattaag 12831057  T
Q  117 c 117  Q
    |    
T  12831058 c 12831058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 12862938 - 12863038
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||   |||||||||||    
T  12862938 taaacagcagaagagttataggaccaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagagaccgagagatgtattaag 12863037  T
Q  117 c 117  Q
    |    
T  12863038 c 12863038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 32735497 - 32735599
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    ||||||||||||||||||||||||| |||||| | ||| |||||| ||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||    
T  32735497 aataaacggcagaagagttatgggaccaaattaaaacatttaataattaagggatcaaattgagaaaataaaatatgttaagggatcggaggatgtatta 32735596  T
Q  115 agc 117  Q
    |||    
T  32735597 agc 32735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 42510210 - 42510110
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||| | | | ||||||||||||    
T  42510210 taaacggcagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaagggatcaggggatgtattaag 42510111  T
Q  117 c 117  Q
    |    
T  42510110 c 42510110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 24761741 - 24761821
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  24761741 taaacggcagacgagttatgagatcaaattgagacacttaataattaagggactaaactaagaaaataaaataagttaagg 24761821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 32734227 - 32734129
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| |||||||||||||||| |||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||| | ||||| ||||||||||||    
T  32734227 taaacgacagaagagttatgggaccaaattaagacact-aatagttaagggaccaaactgaaaaaataaaataagttaaaggaccgg-ggatgtattaag 32734130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 15857638 - 15857724
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 103  Q
    |||||| || |||| |||||||| |||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  15857638 taaacgacataagatttatgggaacaaattgaaacactttatagttaagggaccaaactgagaaaataaaataagttaagggaccgg 15857724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 11907205 - 11907281
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  11907205 caaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggggatgtattaagc 11907281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 42511687 - 42511786
Alignment:
Q  18 aaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||| |||||| | ||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||| ||  | | |||||||||||    
T  42511687 aaacggcagaagatttatggaagcaaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaagggactagggaatgtattaagc 42511786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 39135692 - 39135768
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||| | |||||||||| ||||||||    
T  39135692 caaattgaaacatttaatagttaagggagcaaactgagaaattaaaataagttaaaggaccggaggatctattaagc 39135768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 8188229 - 8188300
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||| |||| ||| |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  8188229 gaagacttataggaccaaattgacacacttaatagttaaaggatcaaactgaaaaaataaaataagttaagg 8188300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 12933847 - 12933767
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||| ||||||||| ||| ||   ||||||||||||||    
T  12933847 taaacggcagaagacttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaaccaaaaataagttaagg 12933767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 18678072 - 18677972
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||||| ||||||||||||||| ||||||| ||||||||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  18678072 taaacgacagaagatttatgggaccaaattgagacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaag 18677973  T
Q  117 c 117  Q
    |    
T  18677972 c 18677972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 24070477 - 24070401
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  |||||||||||||||||| ||||||||| |||||||| |||||| ||||| |||||||||||||    
T  24070477 caaattgaaacgtttaatagttaagggatcacactgagaaattaaaataaattaagggaccgggggatgtattaagc 24070401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 12861604 - 12861545
Alignment:
Q  58 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  12861604 tagttaagggaccaaactgagaaaataaaataagttaagggacgagaggatgtattaagc 12861545  T

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Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 40058114 - 40058035
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 96  Q
    |||||||||||||||||||| || ||| |||| |||||||||||||||||||||||| ||| ||   |||||||||||||    
T  40058114 taaacggcagaagagttatgagaccaatttgaaacacttaatagttaagggatcaaaatgaaaaccaaaaataagttaag 40058035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 39134739 - 39134665
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||| ||  ||||||||||||||| |||||||||||  ||||||||||||||| ||||| |||||||||||    
T  39134739 caaattgaaacgtttaatagttaagggaccaaactgagaatttaaaataagttaagggaccgggggatgtattaa 39134665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 224619 - 224708
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    ||||| ||||| || ||||||||||||||| ||||||| |||| |||| ||| || |||||||||||||||| ||| || ||||||||||    
T  224619 gaagacttatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacataaaataagttaagggaccagatgatgtattaa 224708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 5384366 - 5384466
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||  ||||| |||||||| ||||||||||||||| ||||||| ||||||||| ||| ||   ||||||| ||||||||||  | |||||||||||    
T  5384366 taaacggacgaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaaggaaccaaatgatgtattaag 5384465  T
Q  117 c 117  Q
    |    
T  5384466 c 5384466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 8187254 - 8187164
Alignment:
Q  24 cagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| ||||| ||  ||||||| ||| ||||||||||||| || |||||||||||||||||||| |||||| |||||| |||||||||||    
T  8187254 cagaagaattatgagactaaattgacacatttaatagttaagg-attaaactgagaaaataaaataaattaagggaccgga-gatgtattaag 8187164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 11906414 - 11906354
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||||||||  |||||||||    
T  11906414 ttaatagttaagggaccaaactgagaaattaacataagttaaggaaccgggagatgtatta 11906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 12829625 - 12829566
Alignment:
Q  58 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||  |||||||||||||||    
T  12829625 tagttaagggaccaaactgaaaaaataaaataagttaagggacgagaggatgtattaagc 12829566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 23679206 - 23679143
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| |||||||| ||| |||||||| || ||| |||||||||||||||||||    
T  23679206 ttaatagttaagggaccaaactgaaaaattaaaataaatttagggaccggaggatgtattaagc 23679143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 23855606 - 23855669
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| |||||||| ||| |||||||| || ||| |||||||||||||||||||    
T  23855606 ttaatagttaagggaccaaactgaaaaattaaaataaatttagggaccggaggatgtattaagc 23855669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 22812407 - 22812505
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    ||||| |||||||| ||||||||||||| ||||||| || ||||||||||||  ||| ||| || | |||||||||||||| |||  | ||||||||||    
T  22812407 taaactgcagaagatttatgggatcaaagtgagacattttatagttaagggactaaaatgaaaataaaaaataagttaagggaccaaatgatgtattaa 22812505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 22818215 - 22818158
Alignment:
Q  58 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||| |||||||||||  ||| |||||||||||||| |||||||||||||||||    
T  22818215 tagttaagagatcaaactgaacaaacaaaataagttaagggaccggaggatgtattaa 22818158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 40059347 - 40059428
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||||||||| ||| ||| || | |||||||||||||| ||||||||| ||| ||   ||||||||||||||    
T  40059347 ataaacggcagaagagttattggaccaatttaaaacacttaatagttaggggatcaaaatgaaaaccaaaaataagttaagg 40059428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 7426737 - 7426657
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||| ||||| ||| |||||| | || ||||| |||||||||| ||||||||| ||||| |||||||||||||| ||||||    
T  7426737 taaatggcagtagacttatggaaccatattgacacacttaataattaagggattaaactaagaaaataaaataaattaagg 7426657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 12948008 - 12947928
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| || |||| ||||| |||||||||||||||||| ||||||| ||||||||| ||| ||   ||||||||||||||    
T  12948008 taaacgacataagacttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagg 12947928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 19525308 - 19525408
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| ||||| || ||||| ||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  19525308 taaacggcagaagacttatgtgaccaaatggagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 19525407  T
Q  117 c 117  Q
    |    
T  19525408 c 19525408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 30253673 - 30253582
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| ||||| || |||||||| ||||||||||||| ||||| || ||||| ||||||||| |||||| || | | || ||||||||||||    
T  30253673 gaagacttatgagaccaaattgacacacttaatagttgagggaccacactgaaaaaataaaacaagttaggggatcagatgatgtattaagc 30253582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 15510285 - 15510383
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||  || |||| ||||||||||||||| ||||||| ||||||||| ||| |    |||||||||||||| |||  || |||||||||||    
T  15510285 aacggcagaagacataagggaccaaattgagacactttatagttaggggatcaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 15510383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 15856629 - 15856584
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  15856629 taaacggcagaagagttatgg-atcaaattgatacacttaatagtta 15856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 1663283 - 1663227
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||||||||| |||| ||| |||||| |||||||| |||||||| ||||||||    
T  1663283 taaacggcagaagatttataggaccaaattaagacactttatagttaatggatcaaa 1663227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 2167532 - 2167576
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaata 59  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||    
T  2167532 aataaacggcagaagatttatgggaccaaattgaaacacttaata 2167576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 1273185 - 1273086
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||| |||||||| |||||||| |||||||||||| || |||||||| ||| |||| ||| ||   ||||||| |||||| |||  | |||||||||||    
T  1273185 taaactgcagaagatttatgggaccaaattgagacattttatagttaaaggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaag 1273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 7427993 - 7428044
Alignment:
Q  66 ggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  7427993 ggatcaaactgaaaaaataaaataagttaagggatcgggagatgtattaagc 7428044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 18695667 - 18695718
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 68  Q
    |||||||  ||||| |||||||| ||||||||||||||| ||||||||||||    
T  18695667 taaacggatgaagacttatgggaccaaattgagacactttatagttaaggga 18695718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 19827160 - 19827239
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 96  Q
    ||||||| |||||| |||||||| ||||||||||||||| ||| ||| |||| |||| ||| ||   |||||||||||||    
T  19827160 taaacggaagaagatttatgggaccaaattgagacactttataattatgggaccaaattgaaaaccaaaaataagttaag 19827239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 26403388 - 26403325
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    ||||| |||||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||    
T  26403388 ttatgagatcaaattgagacactttatagttaagggaccaaattgaaaatcaaaaataagttaa 26403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 15613601 - 15613555
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    ||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  15613601 taaacggaagaagatttatgggaccaaattgagacactttatagtta 15613555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 21387731 - 21387677
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||||||| |||||||| |||||||||||| || ||||||| |||| ||||    
T  21387731 aacggcagaagatttatgggaccaaattgagacattttatagttaggggaccaaa 21387677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 26404240 - 26404286
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||| |||||||||||||||||||||||| |||||||| ||| ||||    
T  26404240 aagatttatgggatcaaattgagacactttatagttaaaggaccaaa 26404286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 21389163 - 21389261
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||  ||||| |||||||| ||||||||||||||  ||||||||||||  ||| ||| ||   |||||||||||||| |||  || ||||||||||    
T  21389163 taaacggaggaagacttatgggaccaaattgagacact--atagttaagggaaaaaaatgaaaaccaaaaataagttaagggaccaaagcatgtattaag 21389260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 8284288 - 8284344
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| | ||| |||||||||||| ||  ||||||||||| |||||||||||||||    
T  8284288 caaattaaaacatttaatagttaagagactaaactgagaaattaaaataagttaagg 8284344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 12936122 - 12936202
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||| ||| |||| |||| ||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  12936122 taaacagcataagacttattggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagg 12936202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 19524055 - 19523999
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||||    
T  19524055 caaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagg 19523999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 21006212 - 21006136
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||| ||||||||||  ||| |||||| | |||||||||||||| ||| | | |||||||||||    
T  21006212 caaattgacacatttaaaagttaagggactaaagtgagaagaaaaaataagttaagggacctgcgtatgtattaagc 21006136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 21011852 - 21011928
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||||||||||||||   || |||||| | |||||||||||||| ||| | | |||||||||||    
T  21011852 caaattgaaacatttaatagttaagggactgaagtgagaagaaaaaataagttaagggacctgcgtatgtattaagc 21011928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 24071487 - 24071562
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||||| |||||| |  ||||||| ||| ||||||||||||||| | | |||||||||||||||    
T  24071487 caaattgaaacatttaataattaaggaactaaactgaaaaattaaaataagttaagggatc-gaggatgtattaagc 24071562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 43346466 - 43346567
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    ||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  43346466 ataaacgacagaagagttatgagaccaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaaggtatcgggggatgtattaa 43346565  T
Q  116 gc 117  Q
    ||    
T  43346566 gc 43346567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 23559915 - 23559815
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| | ||||||||||    
T  23559915 taaacgacagaagaattatgggatcaaattgagacacttaataattaagggaccaaactgagaaaataaaataagttaagggaccggggaatgtattaag 23559816  T
Q  117 c 117  Q
    |    
T  23559815 c 23559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 12062404 - 12062503
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||| ||| |||||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  12062404 taaacagcaaaagagtaatgggaccaaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaagggaccggaggatgtattaag 12062503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 21128021 - 21127941
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  21128021 taaacggcagaagagttatgggaccaaattgacacacttaatagttaagagatcaaactgaaaaaataaaataagttaagg 21127941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 23561145 - 23561245
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||| ||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  23561145 taaacgtcagaagaattataggaccaaattaagacacttaataattaagggatcaaactgagaaaataaaataagttaagggatcgggggatgtattaag 23561244  T
Q  117 c 117  Q
    |    
T  23561245 c 23561245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 7921682 - 7921763
Alignment:
Q  36 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  7921682 gggaccaatttgagacacttaatagttaagtgatcaaactgagaaaacaaaataagttaagggaccggaggatgtattaagc 7921763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 48867467 - 48867550
Alignment:
Q  34 atgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  48867467 atgggaccaaattgacacacttaatagttaagggaccaaattgagaaaataaaataagttaagggaccggaggatgtataaagc 48867550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 35173243 - 35173143
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||||||||| || |||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||| || || ||||||||||||    
T  35173243 taaacgacaaaagagttatgagaccaaattgaaatacttaatagttaagggatgaaattgagaaaataaaataagttaagggactgggggatgtattaag 35173144  T
Q  117 c 117  Q
    |    
T  35173143 c 35173143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 39530871 - 39530791
Alignment:
Q  37 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||| ||  |||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  39530871 ggatcaaattgaaacgtttaatagttaagggatcacactgagaaattaaaataagttaagggaccgggggatgtattaagc 39530791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 12060754 - 12060656
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||| || ||||||| |  ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| || || ||||||||||||    
T  12060754 taaacggcaaaatagttatgaggccaaattgagacacttaatagttaagagactaaactgagaaaataaaataagttaagggactgg-ggatgtattaag 12060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 1031888 - 1031812
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  1031888 caaattgaaacatttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 1031812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 43345407 - 43345315
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||| |||||||| |||||||| ||| || |||||||||||| | |||||||||||||||||||||||||| | | | |||||||||||||    
T  43345407 agaagatttatgggaccaaattgaaacattttatagttaagggacctaactgagaaaataaaataagttaagggatctggggatgtattaagc 43345315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 51401371 - 51401471
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| ||| ||| ||||||||||    
T  51401371 taaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccagagcatgtattaag 51401470  T
Q  117 c 117  Q
    |    
T  51401471 c 51401471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 48866237 - 48866158
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 96  Q
    ||||||| |||||| |||| ||| |||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||    
T  48866237 taaacggaagaagacttataggaccaaattgacacacttaatagttcagggactaaactgagaaaataaaataagttaag 48866158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 35174410 - 35174482
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||||||| ||  |||| ||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  35174410 agaagagttatgggaccattttgaaacacttaatagttaagggaccaaaatgaaaaaataaaataagttaagg 35174482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 50150793 - 50150717
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||||||||||| || |||||||||||| ||||||||||||||| ||| | |||||||||||||    
T  50150793 caaattgaaacatttaatagttaagtgaccaaactgagaaattaaaataagttaagggacccggggatgtattaagc 50150717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 46690351 - 46690414
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||||||| || ||| |||| ||||||||||||||| |||||||||||||||||||    
T  46690351 ttaatagttaagggattaagctgggaaattaaaataagttaagggaccggaggatgtattaagc 46690414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 32999871 - 32999793
Alignment:
Q  39 atcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| | ||| ||||||||||||||| |||||||||||| |||||||||||||||   ||| |||||||||||||    
T  32999871 atcaaattaaaacatttaatagttaagggaccaaactgagaaattaaaataagttaaggggtcgggggatgtattaagc 32999793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 2088914 - 2088838
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||||| |||||||| | |||||||||| |||||||| |||||| ||||| |||||||||||||    
T  2088914 caaattgaaacatttaataattaagggacctaactgagaaattaaaataaattaagggaccgggggatgtattaagc 2088838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 33000844 - 33000920
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  |||||||||||||||||||||||||||| |||||||||||| || |||||   |||||||||||    
T  33000844 caaattgaaacgtttaatagttaagggatcaaactgagaaattaaaataagttaggggaccgggaaatgtattaagc 33000920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 45730709 - 45730633
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  ||||||||||||||| |||||||||||| ||||||||||||||| ||| |  ||||||||||||    
T  45730709 caaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggaccaggagatgtattaagc 45730633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 54653986 - 54654086
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||||| ||||||||||||||| |||||||||||| |||| ||| |    |||||||||||||| |||  | |||||||||||    
T  54653986 taaacgacagaagaattatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 54654085  T
Q  117 c 117  Q
    |    
T  54654086 c 54654086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 4067998 - 4067922
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||| | ||| |||||||||||||||| ||||||| ||| |||||||||||||||||  || | |||||||||||    
T  4067998 caaattaaaacatttaatagttaagggattaaactgataaattaaaataagttaaggaattggggcatgtattaagc 4067922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 25583210 - 25583130
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||| |||||||| |||||||||||  |||||||||| |||| |||| ||| ||   ||||||||||||||    
T  25583210 taaacggcagaagacttatgggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaagg 25583130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 38639090 - 38639030
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 101  Q
    ||||| || |||||| |||||||||||| |||||||| ||| |||||||||||||||||||    
T  38639090 caaatcgaaacactttatagttaagggaccaaactgaaaaactaaaataagttaaggaacc 38639030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 39531860 - 39531916
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||| ||| || ||||||||||||| ||||||||||| |||||||||||||||    
T  39531860 caaattgaaacatttcatagttaagggattaaactgagaaattaaaataagttaagg 39531916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 42632802 - 42632702
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||| |||| |||| ||| ||   ||| |||||||||| |||  | |||||||||||    
T  42632802 taaacgacataagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaagtaagttaagggaccaaatgatgtattaag 42632703  T
Q  117 c 117  Q
    |    
T  42632702 c 42632702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 47855358 - 47855458
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||| ||| ||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| |||  || ||||||||||    
T  47855358 taaacggcagaagatttataggaccaaattgagacactttatagttaacggaccaaaatgaaatccaaaaataagttaagggaccaaagcatgtattaag 47855457  T
Q  117 c 117  Q
    |    
T  47855458 c 47855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 32980472 - 32980550
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||||||||||| |||| ||| |||||||||||||||  |||||| |||| |||| ||| || | ||||||||||||    
T  32980472 taaacggcagaagatttataggaccaaattgagacactttgtagttaggggaccaaattgaaaacagaaaataagttaa 32980550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 42633904 - 42634006
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    |||||||| || |||| |||||||| ||||||||||||||  ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||    
T  42633904 aataaacgacataagatttatgggaccaaattgagacactctatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtatta 42634003  T
Q  115 agc 117  Q
    |||    
T  42634004 agc 42634006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 8371316 - 8371236
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||| |||||||| |||||| | |||||||||||| || ||||||| |||| |||| ||| || | ||||||||||||||    
T  8371316 taaactgcagaagatttatggaaccaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaataagttaagg 8371236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 11220678 - 11220778
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||| ||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || ||||||||||    
T  11220678 taaacgacagaagatttataggaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaag 11220777  T
Q  117 c 117  Q
    |    
T  11220778 c 11220778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 47806914 - 47806858
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||| |||||||| ||||    
T  47806914 taaacagcagaagatttataggatcaaattgagacactttataattaagggaccaaa 47806858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 51825641 - 51825697
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||| ||||||| |||||||| |||||||| |||||| |||||||||||| ||||    
T  51825641 taaacgacagaagatttatgggaccaaattgaaacactttatagttaagggaccaaa 51825697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 53901641 - 53901565
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||| | ||| |||||||||||||||  ||||||||||| |||||||| |||||| | ||| | |||||||||||    
T  53901641 caaattaaaacatttaatagttaagggactaaactgagaaattaaaataaattaagggatcggggtatgtattaagc 53901565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 10987674 - 10987753
Alignment:
Q  18 aaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||| || | |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  10987674 aaacggcataaaatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagg 10987753  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 23886783 - 23886696
Alignment:
Q  30 agttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||| |||||||||||| || | ||||||||||| ||| ||| |  | |||||||||||||| |||  || |||||||||||    
T  23886783 agttatgggaccaaattgagacattttaaagttaagggataaaaatgaaattaaaaaataagttaagggaccaaagcatgtattaagc 23886696  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 19579316 - 19579414
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| |||||||  || |||| ||||||||||||||| |||||||||||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  19579316 aacgacagaagacataagggaccaaattgagacactttatagttaagggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 19579414  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 32973233 - 32973135
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||  || |||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  32973233 aacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 32973135  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 32974245 - 32974343
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||  || |||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  32974245 aacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 32974343  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 41386216 - 41386126
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| |||||| | ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  41386216 aagatttatggaaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaacgatgtattaagc 41386126  T

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Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 49122022 - 49122100
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||||||||| | ||||| || ||||||||||||||| ||||||||| || |||| ||| ||   ||||||||||||    
T  49122022 taaacggcagaaaacttatgagaccaaattgagacactttatagttaagagaccaaaatgaaaaccaaaaataagttaa 49122100  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 8372651 - 8372716
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  8372651 ttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagg 8372716  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 17350141 - 17350222
Alignment:
Q  36 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  17350141 gggaccaaattgagacactttatagttaggggaacaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 17350222  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 19253022 - 19253099
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagtta 94  Q
    |||||||||||| | ||||||||||||||||||||| || ||| ||| |||| |||| ||| ||   |||||||||||    
T  19253022 taaacggcagaatatttatgggatcaaattgagacattttataattaggggaccaaattgaaaaccaaaaataagtta 19253099  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 41387468 - 41387553
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||||||||||| || ||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  41387468 ttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 41387553  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 11219526 - 11219470
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||||||||| | ||| || ||||||||||||||| ||||||| |||| ||||    
T  11219526 taaacggcagaagactcatgagaccaaattgagacactttatagttaggggaccaaa 11219470  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29536802 - 29536754
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||| |||||||| ||||||||||||||| |||||||  ||||||||    
T  29536802 agaagatttatgggaccaaattgagacactttatagttagaggatcaaa 29536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 32979178 - 32979138
Alignment:
Q  23 gcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    |||||| | |||||||||||||||||||||||| |||||||    
T  32979178 gcagaaaatttatgggatcaaattgagacactttatagtta 32979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 47766971 - 47767054
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 101  Q
    |||||||  ||||| |||||||| ||||||||||||||| |||||| ||||| |||| ||| ||   |||||||||||| |||||    
T  47766971 taaacggaggaagacttatgggaccaaattgagacactttatagtt-agggaccaaaatgaaaaccaaaaataagttaatgaacc 47767054  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 47808127 - 47808175
Alignment:
Q  18 aaacggcagaagagttatgggatcaaattgagacacttaatagttaagg 66  Q
    ||||| ||||||| ||||| || ||||||||||||||| ||||||||||    
T  47808127 aaacgacagaagatttatgagaccaaattgagacactttatagttaagg 47808175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 48253029 - 48252973
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||  ||||| |||||||| ||||||||||||||| ||||||| |||| ||||    
T  48253029 taaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaa 48252973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 50765818 - 50765874
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||| ||  |||||||||||  ||||||||||||||| |||||||| ||||||    
T  50765818 caaattgaaacgtttaatagttaaaagatcaaactgagaaattaaaataaattaagg 50765874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 53342788 - 53342712
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| ||||||| |||| |||| ||| |    ||||||||||||||||||  || |||||||||||    
T  53342788 caaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaaggaaccaaagcatgtattaagc 53342712  T

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Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 4167547 - 4167447
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  4167547 taaacgacagaagacttataggatcaaattgacacacttaatagttaagggattaaactgagaaaataaaataagttaagggatcggaggatgtattaag 4167448  T
Q  117 c 117  Q
    |    
T  4167447 c 4167447  T

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Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 10257416 - 10257506
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |  |||||||||||||    
T  10257416 aagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaagggacagtgggatgtattaagc 10257506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 132019 - 132119
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||  ||||| |||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||||||||    
T  132019 taaacggaggaagacttatgggaccaaatcgacacacttaatagttaagggaccaaactgagaaaataaaataagttaagggacctaaggatgtattaag 132118  T
Q  117 c 117  Q
    |    
T  132119 c 132119  T

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Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 35315242 - 35315342
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||||  | ||||||||||    
T  35315242 taaacgacagaagacttatgggaccaaattgacatacttaataattaagggatcaaactgagaaaataaaataagttaagggaccgacgaatgtattaag 35315341  T
Q  117 c 117  Q
    |    
T  35315342 c 35315342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 4168871 - 4168949
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||| |||| || || || |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4168871 aacggcaaaagacttgtgagaccaaattgacacactttatagttaagggatcaaactgagaaaataaaataagttaagg 4168949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 10256211 - 10256141
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||||||||| || ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10256211 agaagagttatgagaccattttgagacacttaatagttaagggaccaaactgagaaaataaaataagttaa 10256141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 35483646 - 35483569
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaa-taaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||||| |||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  35483646 caaattgaaacactttatagttaagggaccaaactgaaaaaaataaaataagttaagaaaccggaggatgtattaagc 35483569  T

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Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 46457158 - 46457066
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||||| ||| ||   ||||||||||||||||||  | ||||||||||||    
T  46457158 agaagatttatgggaccaaattgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaaggaaccaaacgatgtattaagc 46457066  T

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Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 35484335 - 35484428
Alignment:
Q  22 ggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    ||||||||||||||||||  ||||||| | |||| |||||||| ||| ||||||||| |||||||||||||||||| ||| |  ||||||||||    
T  35484335 ggcagaagagttatgggactaaattgaaatactttatagttaaaggaccaaactgaggaaataaaataagttaagggacctggagatgtattaa 35484428  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 27899234 - 27899334
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| ||||||||||||||||||| | || |||||||| ||| |||||| ||||||||||||||||||||| || |  | ||||||||||    
T  27899234 taaacgacaaaagatttatgggatcaaattgagatattttatagttaaaggaccaaactaagaaaataaaataagttaagggactgaggaatgtattaag 27899333  T
Q  117 c 117  Q
    |    
T  27899334 c 27899334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 40881163 - 40881087
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  40881163 caaattgaaacggttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 40881087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 47537084 - 47537160
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| ||||||||||||||| |||||||||||  ||||||||||||||| ||||| |||| ||||||||    
T  47537084 caaattgaaacatttaatagttaagggaccaaactgagaagttaaaataagttaagggaccgggggatatattaagc 47537160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 29344223 - 29344160
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  29344223 ttaatagttaaggggtcaaactgagaaattaaaataagttaagggaccgggagatgtattaagc 29344160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 24873617 - 24873695
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| || |||||| ||| || | ||||||||||||    
T  24873617 taaacggcagaagacttatgggaccaaattgagacactttatagttagggcatcaaaatgaaaacaaaaaataagttaa 24873695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 29409286 - 29409336
Alignment:
Q  45 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  29409286 ttgagacattttatagttaagggatcaaactgagaaaataaaataagttaa 29409336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 13287033 - 13287114
Alignment:
Q  36 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| |||||||| ||||||||||||||||||||||||  |||||| ||||||||  ||||| | ||| |||||||||||||    
T  13287033 gggaccaaattgaaacacttaatagttaagggatcaaatagagaaattaaaataaactaagggatcgggggatgtattaagc 13287114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 19278449 - 19278349
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||||| ||||||||||||||| ||| |||||||| |||| ||| |    |||||||||||||| |||  | |||||||||||    
T  19278449 taaacggcagaagaattatgggaccaaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 19278350  T
Q  117 c 117  Q
    |    
T  19278349 c 19278349  T

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Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 25153754 - 25153654
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| |||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  25153754 taaacggaagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcgaaaataagttaagggaccaaatgatgtattaag 25153655  T
Q  117 c 117  Q
    |    
T  25153654 c 25153654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 26406221 - 26406165
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||||||||||||||| |||||||||||||||||| || |||| |||||||||    
T  26406221 taaacggcagaagagttatgagatcaaattgagacactttatcgttatgggatcaaa 26406165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 46674954 - 46675034
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||| |||| |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||   ||||||||||||||    
T  46674954 taaacggcaaaagatttatgggaccaaatcgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaagg 46675034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 47927451 - 47927375
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| || ||| |||||||||||||||  ||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  47927451 caaatcgaaacatttaatagttaagggactaaactgagaaattaaaataagttaagagaccggagcatgtattaagc 47927375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 25154955 - 25155054
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||| | |||||| ||||| ||| |||||||||||||| ||||||||||||||||| ||| ||   |||||||||||||| |||  | ||||||||||    
T  25154955 ataaacagaagaagatttatgagattaaattgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 25155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 43006480 - 43006381
Alignment:
Q  18 aaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||| ||| |||| ||||||||||||||||||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  43006480 aaacggcataagacttaggggaccaaattgagacacttaatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 43006381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 4858371 - 4858464
Alignment:
Q  24 cagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||| |||||||| |||||||||||| || ||||||| ||||||||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  4858371 cagaagatttatgggaccaaattgagacattttatagttaggggatcaaagtgaaaactaaaaataagttaagggaccaaatgatgtattaagc 4858464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 33071678 - 33071743
Alignment:
Q  37 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccg 102  Q
    |||||||||||| ||| ||||||||||||| |  ||||||||||| ||||||||||||||| ||||    
T  33071678 ggatcaaattgaaacatttaatagttaaggaactaaactgagaaattaaaataagttaagggaccg 33071743  T

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Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 18802424 - 18802508
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||  |||||||||||||| ||||||| ||||||||| ||| || | |||||||||||||| |||  | |||||||||||    
T  18802424 ttatgggactaaattgagacactttatagttaggggatcaaaatgaaaacaaaaaataagttaagggaccaaatgatgtattaag 18802508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 37782029 - 37781953
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| ||||||||||| | | |||||||||||| |||||||| |||||| ||||  |||||||||||||    
T  37782029 caaattgaaacatttaatagttaaagaaccaaactgagaaattaaaataatttaagggaccgagggatgtattaagc 37781953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 46458733 - 46458789
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    ||||||| |||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  46458733 taaacggaagaagatttatgggaccaaattgagacactttatagttaagggaccaaa 46458789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 22746340 - 22746418
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||||||| ||||  ||| ||| || | ||||||||||||    
T  22746340 taaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaa 22746418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 29408302 - 29408264
Alignment:
Q  57 atagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  29408302 atagttaagggatcaaactgagaaaataaaataaattaa 29408264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 27897773 - 27897708
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||| |||||||| ||| || ||| |||||| |||||| | |||||||||||||||||||||    
T  27897773 ttatgggaccaaattgaaacattttataattaaggaatcaaattaagaaaataaaataagttaagg 27897708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 45719704 - 45719651
Alignment:
Q  24 cagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactga 77  Q
    ||||||||||||| || |||||| |||||||| ||||||| |||||||||||||    
T  45719704 cagaagagttatgagaccaaatttagacactttatagttaggggatcaaactga 45719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 12631879 - 12631953
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| |||||||||| | | |||||| ||||||||||||||||||| ||| |  ||||||||||||    
T  12631879 caaattgagacactttatagttaagg-acccaactga-aaaataaaataagttaagggacctggagatgtattaagc 12631953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 19279647 - 19279731
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  19279647 ttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaacgatgtattaag 19279731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 22061815 - 22061895
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||| |||| |||||||| |||||||||||  || ||||||| |||| |||| ||| || | ||||||||||||||    
T  22061815 taaacggcataagatttatgggaccaaattgagacgttttatagttaggggaccaaattgaaaacacaaaataagttaagg 22061895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 36702873 - 36702773
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||| | |||||||| |||||||||||| || | |||||||||| |||| ||| |    |||||||||||||| |||  || ||||||||||    
T  36702873 taaacggcagaatatttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaatctaaaaataagttaagggaccaaagcatgtattaag 36702774  T
Q  117 c 117  Q
    |    
T  36702773 c 36702773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 47928474 - 47928550
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||||||||||| ||  ||||| ||||| ||||||||||||||| || |  |||||||||||||    
T  47928474 caaattgaaacatttaatagttaagagactaaactaagaaattaaaataagttaagggacggagggatgtattaagc 47928550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 13446676 - 13446715
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacact 54  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  13446676 aataaacggcagaagatttatgggaccaaattgagacact 13446715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 17288249 - 17288320
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||| |||||||| ||||||||||||||| ||||||| |||| |||| | | || | ||||||||||||||    
T  17288249 gaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaacaaaaaataagttaagg 17288320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 29345122 - 29345176
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||| | ||| |||||||||||||||||||||||| ||| |||||||| ||||    
T  29345122 caaattaaaacatttaatagttaagggatcaaactgaaaaattaaaataaattaa 29345176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 43935281 - 43935235
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    |||||||||||||| ||||| || ||||||||||||||| |||||||    
T  43935281 taaacggcagaagatttatgagaccaaattgagacactttatagtta 43935235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 18801296 - 18801211
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  18801296 ttatgggaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaagc 18801211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 19848869 - 19848910
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||| ||||||||||||||| |||||||||||| ||||    
T  19848869 ttatgggaccaaattgagacactttatagttaagggaccaaa 19848910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 4857297 - 4857217
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||| || ||||| ||||| |||||| || ||||||| |||| |||| ||| ||   ||||||||||||||    
T  4857297 taaacggcagaagatttgtgggaccaaatcgagacattttatagttaggggaccaaagtgaaaaccaaaaataagttaagg 4857217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 22744842 - 22744742
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||| |||| |||| ||| |||||||| |||||| ||||||| ||||  ||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  22744842 taaacggcataagatttataggaccaaattgaaacactttatagttaggggactaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaag 22744743  T
Q  117 c 117  Q
    |    
T  22744742 c 22744742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 33458405 - 33458306
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| |||||| |||||||| | ||||||||||||| |||||||| ||| |||| ||| ||   |||||||||||| | |||  | |||||||||||    
T  33458405 taaacggaagaagacttatggga-ctaattgagacactttatagttaaaggaccaaaatgaaaaccaaaaataagttaaaggaccaaatgatgtattaag 33458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 40926539 - 40926619
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||| |||| | |||| ||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  40926539 taaacggtagaaaatttataggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagg 40926619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 43930415 - 43930335
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| ||||||| |||| ||| |||||||||||  |||||||||| |||| |||| ||| ||   ||||||||||||||    
T  43930415 taaacgacagaagatttataggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaagg 43930335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 45721801 - 45721869
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaac 100  Q
    |||||| | ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||||||    
T  45721801 ttatggaaccaaattgagacactttatagttaggggaccaaaatgaaaactaaaaataagttaaggaac 45721869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 48671173 - 48671118
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    ||||||||| |||| |||||| |||||||||||| |||| ||||||||| |||||||    
T  48671173 taaacggcataagatttatgg-atcaaattgagatactttatagttaagagatcaaa 48671118  T

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Target: scaffold0098 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 42366 - 42465
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  42366 taaacgacagaagatttatgggatcaaattgatacacgtaatagttaagggatcaaactgagaaaataaaataagttaagggacc-gaagatgtattaag 42464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 40977 - 40914
Alignment:
Q  52 acttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||| ||| | |||||||||||    
T  40977 acttaatagttaagggatcaaactgaaaaaataaaaaaggttaagggaccaggggatgtattaa 40914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 7e-31; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 8095442 - 8095343
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  8095442 taaacgacaaaagagtaatgggaccaaattgagacacttaatagttaagggaccaaactgagaaaataaaataagttaagggaccgg-ggatgtattaag 8095344  T

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Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 22619982 - 22619891
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  22619982 gaagatttatgggaccaaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaagggaccgtgggatgtattaagc 22619891  T

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Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 22621163 - 22621254
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  22621163 gaagacttatgggaccaaattgccacacttaatagttaagggatcaaactgagaaaataaaataagttaagggaccgagggatgtattaagc 22621254  T

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Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 13367070 - 13367170
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||||| |||||| | |||||| |||||||||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||    
T  13367070 taaacggcagaagatttatgggaccaaattaaaacactttatagttaagggaccaaagtgaaaaaataaaataagttaaggatccggatgatgtattaag 13367169  T
Q  117 c 117  Q
    |    
T  13367170 c 13367170  T

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Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 34616215 - 34616125
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | | || ||||||||||||    
T  34616215 aagatttatgggaccaaattgagacactttatagttaagagatcaaactgagaaaataaaataagttaagggatcagatgatgtattaagc 34616125  T

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Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 41522708 - 41522806
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||||||||| |||| ||| |||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||| | ||  |||||||||||    
T  41522708 taaacggcagaagacttataggaccaaattgacacacttaatagttaaatgattaaactgagaaaataaaataagttaagggatcgagggatgtattaa 41522806  T

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Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 34617214 - 34617315
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||| ||||||| |||||||  ||||||| ||||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||| | |||||||||    
T  34617214 ataaacggaagaagagctatgggactaaattgacacacttaatagttaatggatcaaactgggaaaaaaaaaaaagttaagggaccggggaatgtattaa 34617313  T
Q  116 gc 117  Q
    ||    
T  34617314 gc 34617315  T

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Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 22913268 - 22913188
Alignment:
Q  37 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||| ||| ||| ||||||||||||| |||||||||| ||||||||||||||||| || ||||||||||||||    
T  22913268 ggatcaaattgaaacatttactagttaagggatccaactgagaaattaaaataagttaaggaatcgaaggatgtattaagc 22913188  T

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Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 24069466 - 24069546
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||   ||||||||||||||    
T  24069466 taaacggcagaagagttatgggaccaaattgagacactttatagttaagggatcaaaatgaaaaccaaaaataagttaagg 24069546  T

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Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 20308701 - 20308622
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 96  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||  |  ||||||||||||||||||||||||||    
T  20308701 taaacgacagaagagttatgagaccaaattgagacacttaatagttaagatactaaactgagaaaataaaataagttaag 20308622  T

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Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 21095334 - 21095255
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 96  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||  |  ||||||||||||||||||||||||||    
T  21095334 taaacgacagaagagttatgagaccaaattgagacacttaatagttaagatactaaactgagaaaataaaataagttaag 21095255  T

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Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 9190486 - 9190561
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  9190486 caaattgaaacatttaatagttaagggactaaactgagaaattaaaataagttaaggaaccgg-ggatgtattaagc 9190561  T

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Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 2421311 - 2421393
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||||| || ||||| |||||||| |||||||||| ||||||||  ||||||| ||| |||||||||||||||    
T  2421311 aataaacggcagaagatttctgggaccaaattgaaacacttaatatttaagggactaaactgataaattaaaataagttaagg 2421393  T

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Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 37276261 - 37276363
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||||||| ||| ||   ||||||| |||||| |||  | |||||||||    
T  37276261 aataaacggcaaaagatttatgggaccaaattgagacactttatagttaagggatcaaagtgaaaatcaaaaataaattaagggaccaaatgatgtatta 37276360  T
Q  115 agc 117  Q
    |||    
T  37276361 agc 37276363  T

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Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 8096565 - 8096665
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| | |||||||||| || |||||| |||| ||||||||||||| ||  ||||||| ||||||||||||||||||| ||  | ||||||||||||    
T  8096565 taaacggtaaaagagttatgagaccaaattaagacgcttaatagttaagagactaaactgaaaaaataaaataagttaagggactaggggatgtattaag 8096664  T
Q  117 c 117  Q
    |    
T  8096665 c 8096665  T

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Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 9189466 - 9189390
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  ||||||||||||||| || ||||||||| |||||||| |||||| |||||||||||||||||||    
T  9189466 caaattgaaacgtttaatagttaagggaccacactgagaaattaaaataaattaagggaccggaggatgtattaagc 9189390  T

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Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 35463037 - 35463109
Alignment:
Q  45 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||| | |||   |||||||||||||    
T  35463037 ttgagacattttatagttaagggatcaaactgagaaaataaaataagttaaaggaccaacggatgtattaagc 35463109  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 12818813 - 12818750
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||| ||||||||    
T  12818813 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccggtggatatattaagc 12818750  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 39220775 - 39220696
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 96  Q
    |||||||||||||| ||| || |||||||||| |||||||||||||||  || |||| ||||||| ||||||||||||||    
T  39220775 taaacggcagaagacttaaggaatcaaattgaaacacttaatagttaatagaccaaaatgagaaattaaaataagttaag 39220696  T

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Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 23768542 - 23768604
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||| |||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  23768542 ttaatagtgaagggaccaaactgaaaaactaaaataagttaagggaccggaggatgtattaag 23768604  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 45195849 - 45195922
Alignment:
Q  42 aaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| ||| |||||||| |||||||||||| ||||||||||||||| || || ||||||||||||    
T  45195849 aaattgagacactttatatttaagggaccaaactgagaaattaaaataagttaagggactgg-ggatgtattaag 45195922  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 22914230 - 22914310
Alignment:
Q  37 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||| ||  ||||||||||| |||||||||||| ||| ||||||||||||||| |||||   |||||||||||    
T  22914230 ggatcaaattgaaacgtttaatagttaatggatcaaactgaaaaattaaaataagttaagggaccgggaaatgtattaagc 22914310  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 36070274 - 36070218
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||| ||||    
T  36070274 taaacggcagaagatttatgggatcaaattgagacactttatagttaggggaccaaa 36070218  T

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Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 38591027 - 38591127
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  38591027 taaacggcataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaag 38591126  T
Q  117 c 117  Q
    |    
T  38591127 c 38591127  T

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Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 41521389 - 41521333
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| | |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  41521389 caaattaacacactttatagttaagggatcaaactgaaaaaataaaataagttaagg 41521333  T

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Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 43386730 - 43386822
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| |||||||||||| || ||||||| |||| |||||||| ||   |||||||||||||| |||  | ||||||||||||    
T  43386730 agaagagttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaagc 43386822  T

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Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 2419929 - 2419870
Alignment:
Q  58 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||  ||||||||||||    
T  2419929 tagttaagggatcaaactgagaaattaaaataaattaagggaccgggagatgtattaagc 2419870  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 12820155 - 12820218
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| | |||||||||| ||||||||||| ||| ||||| |||||||||||||    
T  12820155 ttaatagttaagggaccgaactgagaaattaaaataagtttagggaccgggggatgtattaagc 12820218  T

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Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 35462735 - 35462685
Alignment:
Q  45 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||||| || | |||||||||||||||||||||||||||||||||||||    
T  35462735 ttgagacattttacagttaagggatcaaactgagaaaataaaataagttaa 35462685  T

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Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 43275848 - 43275746
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    ||||||||||| |||||||||||||  |||||||||||||| ||||||| || | |||| ||| || | |||||||||||||  |||  | |||||||||    
T  43275848 aataaacggcataagagttatgggactaaattgagacactttatagttagggaaccaaattgaaaacaaaaaataagttaagagaccaaatgatgtatta 43275749  T
Q  115 agc 117  Q
    |||    
T  43275748 agc 43275746  T

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Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 4534106 - 4534030
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||||| |||| ||| |||||||||||| ||||||||||||||| || |  |||||||||||||    
T  4534106 caaattgaaacatttaatatttaaaggaccaaactgagaaattaaaataagttaagggactgagggatgtattaagc 4534030  T

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Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 16346171 - 16346115
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||| ||  ||||||||||||||| |||||||||||| |||||||||||||||    
T  16346171 caaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagg 16346115  T

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Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 24068426 - 24068326
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||  ||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  || ||||||||||    
T  24068426 taaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaagcatgtattaag 24068327  T
Q  117 c 117  Q
    |    
T  24068326 c 24068326  T

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Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 29738387 - 29738287
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| ||||| ||  |||||||||||||| ||||||||  || |||| ||| || | |||||||||||||| |||  | |||||||||||    
T  29738387 taaacggcagaagacttatgagactaaattgagacactttatagttaatagaccaaattgaaaataaaaaataagttaagggaccaaacgatgtattaag 29738288  T
Q  117 c 117  Q
    |    
T  29738287 c 29738287  T

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Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 31872852 - 31872924
Alignment:
Q  45 ttgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  ||||| |||||||||||||||||| ||||||||||||| | |||||  ||||||||||||    
T  31872852 ttgagacattttttagttgagggatcaaactgagaaattaaaataagttaaaggaccgggagatgtattaagc 31872924  T

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Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 36940053 - 36940153
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||  | |||||||| |||||| ||||||| ||||||||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  36940053 taaacggcagaagatttatgataccaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaag 36940152  T
Q  117 c 117  Q
    |    
T  36940153 c 36940153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 39546697 - 39546797
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||| || | |||||||| ||||||||||||||| | ||||| || | |||| ||| || | |||||||||||||||||   |||||||||||||    
T  39546697 taaacggcataatatttatgggaccaaattgagacactttaaagttagggaaccaaagtgaaaacagaaaataagttaaggaacaaaaggatgtattaag 39546796  T
Q  117 c 117  Q
    |    
T  39546797 c 39546797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 7796829 - 7796911
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 101  Q
    |||||||||||||||||| || ||||||||||||||| ||| |||   ||||||| | | || | ||||||||||||||||||    
T  7796829 aacggcagaagagttatgagaccaaattgagacactttataattagatgatcaaaataaaaataaaaaataagttaaggaacc 7796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 19914926 - 19915004
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    ||||||| |||||| |||||||  ||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||    
T  19914926 taaacggtagaagatttatgggtacaaattgagacactttatagttaagggaccaaattgaaaacccaaaataagttaa 19915004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 31624004 - 31623902
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    |||||||| || |||| |||||||| |||||||| |||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||    
T  31624004 aataaacgacataagatttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtatta 31623905  T
Q  115 agc 117  Q
    |||    
T  31623904 agc 31623902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 37274983 - 37274937
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||    
T  37274983 taaacggcagaagatttatgggaacaaattgagacactttatagtta 37274937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 31625404 - 31625485
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagga 98  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||| ||| |||| |||| ||| ||   |||||||||||||||    
T  31625404 taaacggcaaaagatttatgggaccaaattgagacactttataattaggggaccaaattgaaaaccaaaaataagttaagga 31625485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 41866975 - 41866910
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||| |||||||| |||||| ||||||||||||||||| ||| ||   ||||||||||||||    
T  41866975 ttatgggaccaaattgaaacactttatagttaagggatcaaagtgaaaatcaaaaataagttaagg 41866910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 7770919 - 7770999
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 99  Q
    ||||||| |||||||||| || |||||||| |||||| |||||||   ||||||| ||| || | ||||||||||||||||    
T  7770919 aacggcataagagttatgagaccaaattgaaacactttatagttagatgatcaaaatgaaaataaaaaataagttaaggaa 7770999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 7816110 - 7816190
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 99  Q
    |||||||||||| ||||| || ||||||||||||||| |||||||   ||||||| | | || | ||||||||||||||||    
T  7816110 aacggcagaagaattatgagaccaaattgagacactttatagttagatgatcaaaataaaaataaaaaataagttaaggaa 7816190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 29739663 - 29739719
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    ||||||| |||| | |||||||| ||||||||||||||| ||||||| |||||||||    
T  29739663 taaacggaagaaaatttatgggaccaaattgagacactttatagttaggggatcaaa 29739719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 39515295 - 39515215
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||| |||| |||||||||| || ||||||||||||||| ||||| | ||||||||| ||| ||   ||||||||||||||    
T  39515295 taaatggcaaaagagttatgagaccaaattgagacactttatagtcaggggatcaaaatgaaaaccaaaaataagttaagg 39515215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 41867937 - 41868036
Alignment:
Q  18 aaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| || | |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||| |||||| |||  | ||||||||||||    
T  41867937 aaacggcataaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaactaaaaataaattaagggaccaaatgatgtattaagc 41868036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 117146 - 117064
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||| ||||||| ||||||||||||||||| ||| || ||| ||| |||| |||| ||| ||   ||||||||||||||    
T  117146 aataaacgacagaagatttatgggatcaaattgaaacattttataattaggggaccaaaatgaaaaccaaaaataagttaagg 117064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 7486173 - 7486117
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    ||||| ||| |||| |||||||| ||||||||  ||||| |||||||||||||||||    
T  7486173 taaacagcaaaagatttatgggaccaaattgaagcactttatagttaagggatcaaa 7486117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 16363832 - 16363912
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||| ||||| || ||||||||||||||||||| |||| |||||||  ||| |||| ||| ||   ||||||||||||||    
T  16363832 taaacagcagacgatttatgggatcaaattgagatactttatagttagaggaccaaagtgaaaaccaaaaataagttaagg 16363912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 35945457 - 35945557
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||| ||||||||  ||||||| |||| ||||||| || ||||||||||||  ||| ||| || | |||||||||||||| |||  |  ||||||||||    
T  35945457 taaactgcagaagatatatgggaccaaagtgagacattttatagttaagggactaaaatgaaaacaaaaaataagttaagggaccaaataatgtattaag 35945556  T
Q  117 c 117  Q
    |    
T  35945557 c 35945557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 36071397 - 36071477
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 96  Q
    |||||||| ||||||||||||||| ||| |||| | |||  |||||||||||| |||| ||| || | || ||||||||||    
T  36071397 ataaacggtagaagagttatgggaccaatttgaaatactctatagttaagggaccaaattgaaaacaaaatataagttaag 36071477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 38589916 - 38589817
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| |||||||| ||||||||| ||||| |||||||  ||| |||| ||| || | |||||||||||||| |||  | |||||||||||    
T  38589916 taaacgacataagatttatgggaccaaattgagccactttatagttagaggaccaaattgaaaaca-aaaataagttaagggaccaaatgatgtattaag 38589818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 38789148 - 38789064
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 99  Q
    ||||||| ||| |||| |||| |||||||||||||||  ||||| |||| | ||  ||| ||| |||| ||||||||||||||||    
T  38789148 aataaactgcataagatttataggatcaaattgagacgtttaattgttacgagactaaaatgaaaaaagaaaataagttaaggaa 38789064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 43277941 - 43278021
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||| |||| ||| |||| |||||||||||| || ||||||| |||| |||| | | || | ||||||||||||||    
T  43277941 taaacggcataagatttacgggaccaaattgagacattttatagttaggggaccaaattaaaaataaaaaataagttaagg 43278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 7e-31; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 50531776 - 50531876
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |  ||||||||||||    
T  50531776 taaacgacaaaagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaagggacagtgggatgtattaag 50531875  T
Q  117 c 117  Q
    |    
T  50531876 c 50531876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 41348326 - 41348235
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||||||||||||    
T  41348326 gaagacttatgggatcaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaaaggaccaggggatgtattaagc 41348235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 43419397 - 43419495
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||  ||||||||||||    
T  43419397 aacggcagaagagttaagggaccaaattgagacactttatagttaagggacgaaactgagaaaataaaataagttaagggaccgggagatgtattaagc 43419495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 38417649 - 38417549
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||    
T  38417649 taaacgacataagatttatgggaccaaattgacacacttaatagttaagggaccaaactgagaaaataaaataagttaaaggacaggaggatgtattaag 38417550  T
Q  117 c 117  Q
    |    
T  38417549 c 38417549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 41349554 - 41349645
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||  | |||||||||||    
T  41349554 gaagatttatgggatcaaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaagggaccgttgaatgtattaagc 41349645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 6139083 - 6138993
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||| || |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  6139083 aagagttatgagaccaaattgagacatttaataattaagggaccaaactgagaaaataaaataagttaagggatcggaggatgtattaagc 6138993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 34438502 - 34438402
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||  | |||  |||||||||||    
T  34438502 taaacggcagaagatttatgggaccaaattgagacactttatagttaagggactaaactgagaaaataaaataagttaagagatcgggagatgtattaag 34438403  T
Q  117 c 117  Q
    |    
T  34438402 c 34438402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 44159183 - 44159081
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    ||||||||||||||||||| ||| | |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| | |||||  ||| |||||    
T  44159183 aataaacggcagaagagttgtggaaccaaattgaaacacttaatagttaagagatcaaactgaaaaaataaaataagttaaaggaccgggagatatatta 44159084  T
Q  115 agc 117  Q
    |||    
T  44159083 agc 44159081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 34439680 - 34439780
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||||| |||||||| ||| || |||||||||||| || ||||||||||||||||||||||||| || |  ||||||||||||    
T  34439680 taaacggcagaagatttatgggaccaaattgaaacattttatagttaagggaccacactgagaaaataaaataagttaagggactgagggatgtattaag 34439779  T
Q  117 c 117  Q
    |    
T  34439780 c 34439780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 38419037 - 38419135
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||||||||| ||||| || |||||||| |||||||||| |||||| || |||||||||||||||||||||||||| |||||  |||| ||||||    
T  38419037 taaacggcagaagacttatgagaccaaattgacacacttaataattaaggaattaaactgagaaaataaaataagttaagtaaccgtgggatatattaa 38419135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 17319138 - 17319038
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||| | |||||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||  |||||  |||||||||||    
T  17319138 taaacgccagaagatttatggaaccaaattgaaacactttatagttaagagatcaaactgagaaattaaaataagttaagagaccgggtgatgtattaag 17319039  T
Q  117 c 117  Q
    |    
T  17319038 c 17319038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 50530591 - 50530519
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||||||| ||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  50530591 agaagagttatgggaccattttgagacacttaatagttaaaggaccaaactgagaaaataaaataagttaagg 50530519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 11482868 - 11482792
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  11482868 caaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaagc 11482792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 44160475 - 44160530
Alignment:
Q  62 taagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  44160475 taagggaccaaactgagaaaataaaataagttaagggaccggaggatgtattaagc 44160530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 26393147 - 26393227
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||| | | || | ||||||||||||||    
T  26393147 taaacgacagaagagttatgggaccaaattgagacactttatagttaaaggatcaaaataaaaataaaaaataagttaagg 26393227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 33377384 - 33377484
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  33377384 taaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaag 33377483  T
Q  117 c 117  Q
    |    
T  33377484 c 33377484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 43418105 - 43418029
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||| |||| | || || |||||||||||||    
T  43418105 caaattgaaacactttatagttaagggaccaaactgagaaaataaaataatttaaaggactgggggatgtattaagc 43418029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 26045191 - 26045128
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  26045191 ttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 26045128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 47573701 - 47573764
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  47573701 ttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 47573764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 15787049 - 15786948
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    ||||||||||||| |||||||||| |||||||||||| || ||||||| |||| |||| ||| || | |||||||||||| | |||  | ||||||||||    
T  15787049 ataaacggcagaaaagttatgggaccaaattgagacagtttatagttaggggaacaaaatgaaaacaaaaaataagttaatggaccaaatgatgtattaa 15786950  T
Q  116 gc 117  Q
    ||    
T  15786949 gc 15786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 5417380 - 5417320
Alignment:
Q  37 ggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||| ||| ||||||||||||||| |||||||| ||| |||||||||||||||    
T  5417380 ggatcaaattgaaacatttaatagttaagggaccaaactgaaaaattaaaataagttaagg 5417320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 11113838 - 11113738
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||  ||| ||| ||   |||||||||||||  |||  | |||||||||||    
T  11113838 taaacggcagaagagttatgagaccaaattgagacactttatagttaagggactaaaatgaaaaccgaaaataagttaagtgaccaaatgatgtattaag 11113739  T
Q  117 c 117  Q
    |    
T  11113738 c 11113738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 11115000 - 11115100
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| |||||||||||||||| |||||||||| |||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  11115000 taaacgacagaagagttatgggaccaaattgagatactttatagttaggggaccaaaatgaaaactgaaaataagttaagggaccaaatgatgtattaag 11115099  T
Q  117 c 117  Q
    |    
T  11115100 c 11115100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 43708908 - 43708832
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| ||||||||||| |||  ||||||||||| ||||||||||||||  ||||| |||||||||||||    
T  43708908 caaattgaaacatttaatagttaatggactaaactgagaaattaaaataagttaagagaccgggggatgtattaagc 43708832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 56000383 - 56000283
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||||| ||||||||| ||| ||   |||||||||||||| | |  || ||||||||||    
T  56000383 taaacggcagaagagttataggactaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagggatcaaagcatgtattaag 56000284  T
Q  117 c 117  Q
    |    
T  56000283 c 56000283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 15787522 - 15787604
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaa 99  Q
    ||||||||| || |||||||||| ||||||||||||||| ||||||| |||| |||| ||| || | ||||||| ||||||||    
T  15787522 taaacggcaaaaaagttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataaattaaggaa 15787604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 50498016 - 50498090
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||| ||  |||||| |||||||| || ||||||||| |||||||||| |||| |||||||||||||||||    
T  50498016 caaattgaaacgtttaataattaagggaccacactgagaaattaaaataagtgaagggaccggaggatgtattaa 50498090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 28103506 - 28103562
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||||||||  |||||||| ||||||||||||||| |||||||||||| ||||    
T  28103506 taaacggcagaagtcttatgggaccaaattgagacactttatagttaagggaccaaa 28103562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 29663738 - 29663683
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    ||||||||||||||||||||||| |||||||||||| || |||||| ||||||||||    
T  29663738 taaacggcagaagagttatgggaccaaattgagacaatttatagtt-agggatcaaa 29663683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 30683049 - 30683145
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||||| |||| ||| ||   ||||||| |||||| |||  || |||||||||    
T  30683049 aacggccgaagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaaatcaaaaataaattaagggaccaaagcatgtattaa 30683145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 43709918 - 43709993
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  |||||||||||||||  | ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  43709918 caaattgaaacgtttaatagttaagggactacactgagaaattaaaataagttaagggaccgg-ggatgtattaagc 43709993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 47243024 - 47242968
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| | ||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  47243024 caaattaaaacatttaatagttaagggattaaactgagaaattaaaataagttaagg 47242968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 47572658 - 47572583
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||| |||||||||||||||  || |||||||| ||||||||||||||| | ||| |||||||||||||    
T  47572658 caaattgaaacatttaatagttaagggactaagctgagaaattaaaataagttaagggatcgg-ggatgtattaagc 47572583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 50497067 - 50496991
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||| | ||| ||||||||||||| |  ||||||||||| ||||||||||| ||| || ||||||||||||||||    
T  50497067 caaattaaaacatttaatagttaaggaactaaactgagaaattaaaataagttgagggactggaggatgtattaagc 50496991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 5687271 - 5687220
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 68  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  5687271 taaacggcaaaagatttatgggaccaaattgagacactttatagttaaggga 5687220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 37560329 - 37560419
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  37560329 aagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 37560419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 37559079 - 37558994
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||||||||||| || ||||||| |||| |||| ||| ||   ||||||||||||||||||  | ||||||||||||    
T  37559079 ttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaaggaaccaaatgatgtattaagc 37558994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 21104330 - 21104414
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 101  Q
    |||||| |||||||  |||| || ||||||||||||||| ||||||| |||| |||| ||| || | ||||||| ||||||||||    
T  21104330 taaacgacagaagacatatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataatttaaggaacc 21104414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 27408859 - 27408759
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| |||||| |||||||| ||||||||||||||| |||||||   || |||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  27408859 taaacggaagaagatttatgggaccaaattgagacactttatagttagatgaccaaattgaaaactgaaaataagttaagggaccaaatgatgtattaag 27408760  T
Q  117 c 117  Q
    |    
T  27408759 c 27408759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 46796046 - 46796146
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||  ||||| |||||||| ||||||||||||||| ||||||| |||| |||| | | ||   |||||||||||||| |||  | |||||||||||    
T  46796046 taaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaataagttaagggaccaaacgatgtattaag 46796145  T
Q  117 c 117  Q
    |    
T  46796146 c 46796146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 47244047 - 47244110
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| || ||||||||| |||||||| |||||| | ||  |||||||||||||    
T  47244047 ttaatagttaagggaccacactgagaaattaaaataaattaagggatcgagggatgtattaagc 47244110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 17494199 - 17494145
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    |||||| | ||||||||||||||||||| |||| ||||||| |||||||| ||||    
T  17494199 caaattaaaacacttaatagttaagggaccaaaatgagaaattaaaataaattaa 17494145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 29834454 - 29834552
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||  || ||||||||||||||| || | ||||||| ||||||||| ||| |    |||||||||||||| |||  || |||||||||||    
T  29834454 aacggcagaagacataagggatcaaattgagatacattatagttaggggatcaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 29834552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 47668615 - 47668717
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    ||||||||||||| ||  || |||| ||| ||||||||||| ||||||| |||| |||| ||| || | |||||||||||| | |||  | |||||||||    
T  47668615 aataaacggcagatgatataagggaccaatttgagacactttatagttaggggaccaaagtgaaaacagaaaataagttaaaggaccaaatgatgtatta 47668714  T
Q  115 agc 117  Q
    |||    
T  47668715 agc 47668717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 307834 - 307871
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagtta 63  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  307834 gaagacttatgggatcaaattgagacactttatagtta 307871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 38371844 - 38371925
Alignment:
Q  36 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||||||  ||  |||||| ||||||||||||| || | |||||||||||||  |||| | ||||||||||||    
T  38371844 gggatcaatttgagacgttttttagttaggggatcaaactgaaaacagaaaataagttaagagaccgaatgatgtattaagc 38371925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 44302811 - 44302770
Alignment:
Q  22 ggcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    ||||||| | |||||||||||||||||||||||| |||||||    
T  44302811 ggcagaaaatttatgggatcaaattgagacactttatagtta 44302770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 56001303 - 56001388
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| ||| ||||||||||||||| ||||||| |||  |||| ||| || | |||||||||||||| |||  || |||||||||||    
T  56001303 ttataggaccaaattgagacactttatagttagggggccaaaatgaaaataaaaaataagttaagggaccaaagcatgtattaagc 56001388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 3533636 - 3533708
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||| ||| ||||||||||||||| ||||||| | |||| || ||| ||   ||||||||||||||    
T  3533636 agaagagttatcggaccaaattgagacactttatagttaggtgatcgaaatgaaaattaaaaataagttaagg 3533708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 26059842 - 26059903
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||| |||  ||||||||||| |||||||| |||||| ||  |||||||||||||||    
T  26059842 ttaatagttaatggactaaactgagaaattaaaataaattaagggac--gaggatgtattaagc 26059903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 31711188 - 31711088
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| ||||| || ||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| |||  | |||||||||||    
T  31711188 taaacgacataagacttatgagaccaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 31711089  T
Q  117 c 117  Q
    |    
T  31711088 c 31711088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 40146651 - 40146699
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||| |||||||| ||||||||||||||| |||||||| ||| ||||    
T  40146651 agaagacttatgggaccaaattgagacactttatagttaaaggaccaaa 40146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 48413595 - 48413671
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  ||||||||||||| | || |||| |||| ||||||||||||||| | ||  |||||||||||||    
T  48413595 caaattgaaacgtttaatagttaaggaaccacactgggaaattaaaataagttaagggatcgagggatgtattaagc 48413671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 52659007 - 52658907
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| |||| | | |||||||| ||| || ||||||| |||| |||| ||| || | |||||||||||||| |||  |  ||||||||||    
T  52659007 taaacggcagaagatttatagaaccaaattgaaacattttatagttaggggaccaaagtgaaaataaaaaataagttaagggaccaaaacatgtattaag 52658908  T
Q  117 c 117  Q
    |    
T  52658907 c 52658907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 55953872 - 55953952
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||| |||| ||| |||| |||||||||||| || ||||||| |||| |||| ||| ||   ||||||||||||||    
T  55953872 taaacggcataagatttacgggaccaaattgagacattttatagttatgggaccaaattgaaaatcaaaaataagttaagg 55953952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 14510529 - 14510629
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| | ||||| | ||||||||||    
T  14510529 taaacggcagaagagttataggaccaaattgagacacttaatagttaagggactaaactaagaaaataaaataagttaaaggaccggggtatgtattaag 14510628  T
Q  117 c 117  Q
    |    
T  14510629 c 14510629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 25570899 - 25570990
Alignment:
Q  26 gaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| |||||| |||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||| |||| ||||||||||||||    
T  25570899 gaagacttatggaatcaaattgaaacacttaatagttaagggactacactgagaaaataaaataagttaagggaccgaaggatgtattaagc 25570990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 7983715 - 7983814
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| |||||| |||| ||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| | ||| ||||||||||||    
T  7983715 taaacggtagaagacttataggaccaaattgacacacttaatagttaaggaattaaactgagaaaataaaataagttaagggatcgg-ggatgtattaag 7983813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 14509305 - 14509205
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| ||||||| |||||||| | |||| | |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||    
T  14509305 taaacgacagaagatttatgggaccgaattaaaacactttatagttaagggaccaaagtgagaaaataaaataagttaagggatcggaggatgtattaag 14509206  T
Q  117 c 117  Q
    |    
T  14509205 c 14509205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 15850685 - 15850779
Alignment:
Q  23 gcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||||| || |||||||| ||| || |||||||| ||| |||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  15850685 gcagaagagttatgagaccaaattgaaacattttatagttaaaggagcaaactaagaaaataaaataagttaagggaccgggggatgtattaagc 15850779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 3533646 - 3533746
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| ||||| || |||||||| ||||||||||||||||||| |||||| | ||||||||||||||||| | ||||||| ||||||||||    
T  3533646 taaacgacaaaagatttatgagaccaaattgacacacttaatagttaagggaccaaactaaaaaaataaaataagttaaaggaccggagaatgtattaag 3533745  T
Q  117 c 117  Q
    |    
T  3533746 c 3533746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 15850189 - 15850108
Alignment:
Q  36 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| ||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||||| ||||| |||||||    
T  15850189 gggaccaaattgagacactttatagttaagagaccaaactgaaaaaataaaataagttaagggaccgggggatgcattaagc 15850108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 7982384 - 7982308
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | | |||  ||||||||||||    
T  7982384 caaattgacacactttatagttaagggatcaaactgagaaaataaaataagttaaaggatcgggagatgtattaagc 7982308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 7490225 - 7490296
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagga 98  Q
    |||| |||||||| |||||||||||| || ||| |||| ||| |||||||||||||||||||||||||||||    
T  7490225 aagatttatgggaccaaattgagacattttataattaaaggaccaaactgagaaaataaaataagttaagga 7490296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 3532280 - 3532210
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||| ||||| || |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  3532280 aagacttatgtgaccaaattgacacacttaataattaagggatcaaactgaaaaaataaaataaattaagg 3532210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 25569867 - 25569765
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    |||||||||  ||||| ||||| || |||||||| |||  |||||||||||||| |||||| | ||||||||||||||||| | ||| | ||||||||||    
T  25569867 aataaacggaggaagacttatgtgaccaaattgacacaagtaatagttaagggaccaaactaaaaaaataaaataagttaaaggacctggggatgtatta 25569768  T
Q  115 agc 117  Q
    |||    
T  25569767 agc 25569765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 8538686 - 8538745
Alignment:
Q  58 tagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| || |||||||||||||||||||||||||||| |||||  ||||||||||||    
T  8538686 tagttaagagaccaaactgagaaaataaaataagttaagggaccggttgatgtattaagc 8538745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 10368404 - 10368503
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||| |||| | |||||||||||||||||||||||| ||||||| ||||||||| ||| ||   ||||||| |||||| |||  | ||||||||||    
T  10368404 ataaacggaagaaaatttatgggatcaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaagggaccaaatgatgtattaa 10368503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 12854130 - 12854224
Alignment:
Q  23 gcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| |||| ||| |    |||||||||||||| |||  || |||||||||||    
T  12854130 gcagaagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatctaaaaataagttaagggaccaaagcatgtattaagc 12854224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 33553409 - 33553483
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||| ||  |||||||||||| || |||||||| ||| ||||||||||||||| | |||||||||||||||    
T  33553409 caaattgaaacgtttaatagttaagagaccaaactgaaaaattaaaataagttaagggatcggaggatgtattaa 33553483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 35801065 - 35801145
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||| ||||||||||||| |||| |||||||| |||||| ||||||||||||| ||| ||| || | |||| |||||||||    
T  35801065 taaatggcagaagagttaggggaccaaattgaaacactttatagttaagggatgaaaatgaaaatagaaaacaagttaagg 35801145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 42246687 - 42246587
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| | |||||||||||||||||||||| |||||| ||| ||| ||||||||| ||| ||   |||| ||||||||| |||  || ||||||||||    
T  42246687 taaacggtaaaagagttatgggatcaaattgaaacactttataattaggggatcaaaatgaaaaccaaaaacaagttaagggaccaaagcatgtattaag 42246588  T
Q  117 c 117  Q
    |    
T  42246587 c 42246587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 7037062 - 7037011
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaaggga 68  Q
    |||||||||||||| |||||||| |||||||| |||||| ||||||||||||    
T  7037062 taaacggcagaagacttatgggaccaaattgaaacactttatagttaaggga 7037011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 7038366 - 7038452
Alignment:
Q  31 gttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||| ||||||||||||||| |||||||||||| |||| ||| |    |||||||||||||| |||  | ||||||||||||    
T  7038366 gttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagc 7038452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 20630715 - 20630777
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 103  Q
    |||||||| ||  |||||||||||||||| ||||||||||| ||||||||||| ||| |||||    
T  20630715 caaattgaaacgtttaatagttaagggattaaactgagaaattaaaataagtttagggaccgg 20630777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 23177770 - 23177724
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||    
T  23177770 taaacggcagaagatttatgggaccaaattgagacactttatagtta 23177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 23589027 - 23588981
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagtta 63  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||    
T  23589027 taaacggcagaagatttatgggaccaaattgagacactttatagtta 23588981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 37867834 - 37867752
Alignment:
Q  35 tgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||| ||||||||||||||| ||||||| ||||||||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  37867834 tgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 37867752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 2581899 - 2581822
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagtta 94  Q
    ||||||||  |||| |||||||| ||||||||||||||| ||||||| ||||||||| ||| ||   |||||||||||    
T  2581899 taaacggcgtaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagtta 2581822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 4829561 - 4829461
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| ||||| ||||||||||||||| || ||||||||||||  ||| ||| ||   |||||||||||||||| |  | |||||||||||    
T  4829561 taaacgacataagatttatgagatcaaattgagacattttatagttaagggactaaagtgaaaacgaaaaataagttaaggaatcaaatgatgtattaag 4829462  T
Q  117 c 117  Q
    |    
T  4829461 c 4829461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 6707022 - 6706922
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| |||||| |||||| | ||||||||||||||| ||||||| |||| |||| ||| |    |||||||||||||| |||  || ||||||||||    
T  6707022 taaacggaagaagatttatggaaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagggaccaaagcatgtattaag 6706923  T
Q  117 c 117  Q
    |    
T  6706922 c 6706922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 10367335 - 10367251
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 101  Q
    |||||||||||||| ||||| ||  |||||||||||||| |||||||||  | |||| ||| ||   ||||||||||||||||||    
T  10367335 taaacggcagaagacttatgagactaaattgagacactttatagttaagaaaccaaattgaaaatcaaaaataagttaaggaacc 10367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 11386720 - 11386664
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    ||||||| |||||  ||||||||||||||||| |||||| |||||||||||| ||||    
T  11386720 taaacggtagaaggtttatgggatcaaattgaaacactttatagttaagggaccaaa 11386664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 12959725 - 12959809
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 101  Q
    |||||||||||||| |||| |||  |||||||||||||| || ||||||||| |||| | | ||   ||||||||||||||||||    
T  12959725 taaacggcagaagatttatcggactaaattgagacactttattgttaagggaccaaattaaaaatcaaaaataagttaaggaacc 12959809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 37869060 - 37869140
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| ||||||| ||||| ||  |||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||||    
T  37869060 taaacgacagaagacttatgagactaaattgagacactttatagttaagggaccaaattgaaaatcaaaaataagttaagg 37869140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 41795989 - 41796052
Alignment:
Q  34 atgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| ||||||||||||||| ||||||| ||||||||| ||| ||   ||||||||||||||    
T  41795989 atgggaccaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagg 41796052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 42772521 - 42772434
Alignment:
Q  30 agttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||| |||||||||||  || | ||||||||||||||| ||| |    ||||||||||||||||||  || |||||||||||    
T  42772521 agttatgggaccaaattgagacggtttaaagttaagggatcaaaatgaaattcaaaaataagttaaggaaccaaagcatgtattaagc 42772434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 2305634 - 2305580
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    ||||||||||||  || |||| ||||||||||||||| ||||||| |||||||||    
T  2305634 aacggcagaagacataagggaccaaattgagacactttatagttaggggatcaaa 2305580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 30178601 - 30178555
Alignment:
Q  57 atagttaagggatcaaactgagaaaataaaataagttaaggaaccgg 103  Q
    |||||||||||| ||| |||||||| ||||||||||||||| |||||    
T  30178601 atagttaagggaccaatctgagaaattaaaataagttaagggaccgg 30178555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 8537089 - 8537028
Alignment:
Q  36 gggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||| ||| |||||||| ||  ||||||| | |||||||| |||||||||||||||||||||    
T  8537089 gggaccaatttgagacattttttagttaaagaatcaaactaagaaaataaaataagttaagg 8537028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 12958497 - 12958456
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||||| ||||||||||||||| ||||||| |||||||||    
T  12958497 ttatgggaccaaattgagacactttatagttaggggatcaaa 12958456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 12852974 - 12852926
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaa 73  Q
    |||||| |||||||| ||||||||||||||| ||||||| |||| ||||    
T  12852974 agaagatttatgggaccaaattgagacactttatagttaggggaccaaa 12852926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 32614481 - 32614401
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||| || ||||||||||| |  ||||||| |||| | ||||||| |||| |||| ||| ||||||||||||| |||||    
T  32614481 taaacgacataagagttatggaactaaattgaaacacgtgatagttaggggaccaaaatgaaaaaataaaataagctaagg 32614401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 35799608 - 35799528
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||| |||| ||||||| || ||||||||||||||| ||||||| ||||  ||| ||| ||   ||||||||||||||    
T  35799608 taaacggaagaaaagttatgagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagg 35799528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 17187 - 17280
Alignment:
Q  24 cagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||| | |||||||||||    
T  17187 cagaagagttattggattaaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaaaggaccggggtatgtattaagc 17280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 16011 - 15946
Alignment:
Q  52 acttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| |||| ||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  16011 actttatagctaagggaccaaagtgaaaaaataaaataagttaagggaccggaggatgtattaagc 15946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 14328794 - 14328893
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  14328794 taaacgacaaaagaattatgagaccaaattaagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggactgg-ggatgtattaag 14328892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 14421804 - 14421903
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  14421804 taaacgacaaaagaattatgagaccaaattaagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggactgg-ggatgtattaag 14421902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 14326241 - 14326150
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| |||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  14326241 agaagaattatgggaccaaattgagacgctcaataattaagggatcaaactgagaaaataaaataagttaagggatcgggggatgtattaag 14326150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 14419251 - 14419160
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| |||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  14419251 agaagaattatgggaccaaattgagacgctcaataattaagggatcaaactgagaaaataaaataagttaagggatcgggggatgtattaag 14419160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 13800117 - 13800027
Alignment:
Q  27 aagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||| |||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| |||   |||||||||||||    
T  13800117 aagatttatgggaccaaattgacacaattaatagttaagggaccaaactgagaaaataaaataagttaagggacctagggatgtattaagc 13800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 1757538 - 1757614
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  1757538 caaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggaccggaggatgtattaagc 1757614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 16269821 - 16269883
Alignment:
Q  50 acacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtat 112  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  16269821 acacttaatagttaagagatcaaactgagaaaataaaataagttaagagaccggaggatgtat 16269883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 5693647 - 5693707
Alignment:
Q  57 atagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||    
T  5693647 atagttaagggatcaaattgagaaaataaaataagttaagggatcgggggatgtattaagc 5693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 31740292 - 31740370
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaa 95  Q
    ||||||||| |||| |||||||| ||||||||||||||| |||||||||||| |||| ||| || | ||||||||||||    
T  31740292 taaacggcataagatttatgggaccaaattgagacactttatagttaagggaccaaattgaaaacaaaaaataagttaa 31740370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 22299923 - 22300003
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| |||| |||| ||| ||   ||||||||||||||    
T  22299923 taaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagg 22300003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 31738459 - 31738359
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||| |||||||| |||||||| |||||||| |||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  |||||||||||||    
T  31738459 taaaccgcagaagacttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaaggatgtattaag 31738360  T
Q  117 c 117  Q
    |    
T  31738359 c 31738359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 33807785 - 33807705
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||| | |||||| ||||||||||||||||| |||||||||||| |||| ||| ||   ||||||||||||||    
T  33807785 taaacggcagaaaatttatggcatcaaattgagacactttatagttaagggaccaaagtgaaaaccaaaaataagttaagg 33807705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 27438886 - 27438788
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| |||  | ||||||||||    
T  27438886 taaacggcagaatatttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaa 27438788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 9927687 - 9927602
Alignment:
Q  32 ttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||||||||||||||| ||||||| |||| |||||| | || | |||||||||||||| ||| || | ||||||||||    
T  9927687 ttatgggaccaaattgagacactttatagttaggggaccaaactaaaaacaaaaaataagttaagggaccagatgctgtattaagc 9927602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 33802044 - 33802137
Alignment:
Q  24 cagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||| ||||||||||||||| |||||||| ||||||| |||| |||| ||| ||   |||||||||||||| |||  | ||||||||||||    
T  33802044 cagaagatttatgggatcaaattaagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 33802137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 8412336 - 8412436
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||||||| ||||  ||| ||| || | |||||||||||||| |||  |  ||||||||||    
T  8412336 taaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaagggaccaaataatgtattaag 8412435  T
Q  117 c 117  Q
    |    
T  8412436 c 8412436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 27107253 - 27107177
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| | | |||||||||||  ||||||||||||||| ||||||||||||||| | ||| | |||||||||||    
T  27107253 caaattgaaatatttaatagttaattgatcaaactgagaaattaaaataagttaagggatcggggaatgtattaagc 27107177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 27108231 - 27108279
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccg 102  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  27108231 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccg 27108279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 27149059 - 27148983
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| | | |||||||||||  ||||||||||||||| ||||||||||||||| | ||| | |||||||||||    
T  27149059 caaattgaaatatttaatagttaattgatcaaactgagaaattaaaataagttaagggatcggggaatgtattaagc 27148983  T

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Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 27150028 - 27150076
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccg 102  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  27150028 ttaatagttaagggaccaaactgagaaattaaaataagttaagggaccg 27150076  T

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Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 27440195 - 27440295
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| |||||| |||||||| |||||||||||| || | ||||||||||||||| ||| |    |||||||||||||| |||  | |||||||||||    
T  27440195 taaacggaagaagatttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaataagttaagggaccaaatgatgtattaag 27440294  T
Q  117 c 117  Q
    |    
T  27440295 c 27440295  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 1692145 - 1692070
Alignment:
Q  42 aaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||| ||| |||||||||||| || |||||||| ||| |||||||| |||||| || || |||||||||||||    
T  1692145 aaattgaaacatttaatagttaagagaccaaactgaaaaattaaaataaattaagggactgggggatgtattaagc 1692070  T

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Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 18139505 - 18139607
Alignment:
Q  15 aataaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtatta 114  Q
    ||||||||||||||||  || |||| ||| ||||||||||| |||||||  |||||||| ||| ||   |||||||||||||| |||  | |||||||||    
T  18139505 aataaacggcagaagatataagggaccaatttgagacactttatagttagaggatcaaagtgaaaacggaaaataagttaagggaccaaatgatgtatta 18139604  T
Q  115 agc 117  Q
    |||    
T  18139605 agc 18139607  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 1693038 - 1693085
Alignment:
Q  54 ttaatagttaagggatcaaactgagaaaataaaataagttaaggaacc 101  Q
    ||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  1693038 ttaatagttaagggaccaaactgaaaaattaaaataagttaacgaacc 1693085  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22298701 - 22298662
Alignment:
Q  16 ataaacggcagaagagttatgggatcaaattgagacactt 55  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  22298701 ataaacggcagaatagttatgggatcaaactgagacactt 22298662  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 5311375 - 5311275
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||| || |||| |||| ||| ||||||||||||||| ||||||| ||||  ||| ||| ||   |||||||||||||| |||  | |||||||||||    
T  5311375 taaacgacataagatttataggaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 5311276  T
Q  117 c 117  Q
    |    
T  5311275 c 5311275  T

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Target: scaffold0166 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 4238 - 4318
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  4238 taaacggcagacgagttatgagatcaaattgagacacttaataattaagggactaaactaagaaaataaaataagttaagg 4318  T

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Target: scaffold1974 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 648 - 748
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| ||||||||  |||||||||||||| ||||||| |||| |||| ||| || | |||||||||||||| |||  | |||||||||||    
T  648 taaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaag 747  T
Q  117 c 117  Q
    |    
T  748 c 748  T

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Target: scaffold1878 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 626 - 526
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| ||||||||  |||||||||||||| ||||||| |||| |||| ||| || | |||||||||||||| |||  | |||||||||||    
T  626 taaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaag 527  T
Q  117 c 117  Q
    |    
T  526 c 526  T

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Target: scaffold0290 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 9498 - 9598
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    |||||||||||||| ||||||||  |||||||||||||| ||||||| |||| |||| ||| || | |||||||||||||| |||  | |||||||||||    
T  9498 taaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaag 9597  T
Q  117 c 117  Q
    |    
T  9598 c 9598  T

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Target: scaffold0041 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 85120 - 85196
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  ||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  85120 caaattgaaacggttaatagttaagggaccacactgagaaattaaaataagttaagggaccgggggatgtattaagc 85196  T

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Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 23494 - 23402
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| |||||||||||| || ||||||| |||| |||||||| ||   |||||||||||||| |||  | ||||||||||||    
T  23494 agaagagttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaagc 23402  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 205596 - 205672
Alignment:
Q  41 caaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||| ||  |||||| |||||||| |||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  205596 caaattgaaacgtttaataattaagggaccaaactgagaaattaaaataagttaagggaccgggagatgtattaagc 205672  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 204593 - 204532
Alignment:
Q  55 taatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    |||||||||||||| ||| |||||||| ||||||||||||||| ||||| | |||||||||||    
T  204593 taatagttaagggaccaa-ctgagaaattaaaataagttaagggaccggtgtatgtattaagc 204532  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 48476 - 48574
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaa 115  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||| ||| |||| ||| |    |||||||||||||| |||  | ||||||||||    
T  48476 taaacggcagaatatttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaa 48574  T

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Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 47166 - 47066
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| |||||| |||||||| |||||||||||| || | ||||||||||||||| ||| |    |||||||||||||| |||  | |||||||||||    
T  47166 taaacggaagaagatttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaataagttaagggaccaaatgatgtattaag 47067  T
Q  117 c 117  Q
    |    
T  47066 c 47066  T

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Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 96256 - 96156
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaag 116  Q
    ||||||| |||||| |||| ||||||||||||||||||| ||||||| |||| |||| ||| ||   |||||||||||| | |||  | |||||||||||    
T  96256 taaacggaagaagatttatcggatcaaattgagacactttatagttaggggaccaaattgaaaatcgaaaataagttaatggaccaaatgatgtattaag 96157  T
Q  117 c 117  Q
    |    
T  96156 c 96156  T

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Target: scaffold0084 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 13226 - 13304
Alignment:
Q  19 aacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    ||||| |||||||||||||||  ||||||||||| || ||||||| |||| |||||||| ||   ||||||||||||||    
T  13226 aacggaagaagagttatgggacgaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagg 13304  T

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Target: scaffold0178 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 2293 - 2385
Alignment:
Q  25 agaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaaggaaccggaggatgtattaagc 117  Q
    ||||||||||||||| |||||||| |||||| ||| ||| |||| |||| ||| ||   |||||||||||||| |||  || |||||||||||    
T  2293 agaagagttatgggaccaaattgaaacactttataattaggggaccaaaatgaaaaccaaaaataagttaagggaccaaagcatgtattaagc 2385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 56720 - 56800
Alignment:
Q  17 taaacggcagaagagttatgggatcaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagg 97  Q
    |||||||||||||| |||| ||| ||||||||||||||| ||| ||| |||| |||| ||| |  | ||||||||||||||    
T  56720 taaacggcagaagatttataggaccaaattgagacactttataattaggggaccaaagtgaaatcaaaaaataagttaagg 56800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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