View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13316_high_12 (Length: 308)
Name: NF13316_high_12
Description: NF13316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13316_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 12 - 290
Target Start/End: Original strand, 37163060 - 37163338
Alignment:
| Q |
12 |
atgaataacaaaaggtttttggttcttctttggaacctgtttcaaagcatcattgattttcttgaactttccactaccatctttagccacaaccacatta |
111 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
37163060 |
atgaataacaaaaggtttttggttcttctttggaacctgtttcaaagcatcattgattttcttaaactttccactaccatctttagccacaaccacatta |
37163159 |
T |
|
| Q |
112 |
gccttgagtttatgttgatttacatgaagaagtcttcgaacaccaacacttaaaccatcaccaacccaagaaggaacatcattaacatcatctttagcaa |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37163160 |
gccttgagtttatgttgatttacatgaagaagtcttcgaacaccaacacttaaaccatcaccaacccaagaaggaacatcattaacatcatctttagcaa |
37163259 |
T |
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| Q |
212 |
caacttgttcacccacatactcgcccttataatcatcaataagtcgacgtccatctgttgtcgcgttcaaatccaaaac |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
37163260 |
caacttgttcacccacatactcgcccttataatcatcaataagacgacgtccatctgttgtcgcgttcaaatccaaaac |
37163338 |
T |
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