View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13316_low_21 (Length: 226)
Name: NF13316_low_21
Description: NF13316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13316_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 4869143 - 4869340
Alignment:
| Q |
18 |
taatgaaggttcttatggtgttgaatttaggtggttgattattgaagaattgttgtggagagattgaagtgatgaatttggttgaagataatgaaatgga |
117 |
Q |
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| T |
4869143 |
taatgaaggttcttatggtgttgaatttaggtggttgattattgaagaattgttgtggagagattgaagtgatgaatttggttgaagatgatgaaatgga |
4869242 |
T |
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| Q |
118 |
agagtttgaaaacatggctccaaaaggaggttggatatggctaacaagtatcattactatactaacgtttgtgtttgatgctcaatgttgatgttcat |
215 |
Q |
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| T |
4869243 |
agagtttgaaaacatggctccaaaaggaggttggatatggctaacaagtatcattactatactaacgtttgtgtttgatgctcaatgttgatgttcat |
4869340 |
T |
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