View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13318_low_5 (Length: 299)

Name: NF13318_low_5
Description: NF13318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13318_low_5
NF13318_low_5
[»] chr2 (16 HSPs)
chr2 (12-299)||(12130638-12130925)
chr2 (12-299)||(88459-88746)
chr2 (15-299)||(34695907-34696189)
chr2 (15-299)||(34718319-34718601)
chr2 (80-299)||(18345555-18345773)
chr2 (12-254)||(44017318-44017560)
chr2 (12-187)||(1417981-1418156)
chr2 (130-216)||(9709912-9709998)
chr2 (10-135)||(22845600-22845725)
chr2 (12-122)||(9710032-9710142)
chr2 (12-133)||(11292063-11292181)
chr2 (12-149)||(13109869-13110006)
chr2 (150-254)||(26198638-26198742)
chr2 (12-121)||(14827158-14827267)
chr2 (7-102)||(26198779-26198874)
chr2 (12-61)||(35158845-35158894)
[»] chr7 (14 HSPs)
chr7 (12-299)||(16731833-16732120)
chr7 (12-299)||(17709967-17710254)
chr7 (13-299)||(16098390-16098676)
chr7 (12-299)||(9328602-9328888)
chr7 (12-298)||(22289142-22289428)
chr7 (12-299)||(1581515-1581803)
chr7 (12-216)||(29200955-29201159)
chr7 (87-295)||(17877312-17877520)
chr7 (12-298)||(30493610-30493895)
chr7 (94-299)||(30824557-30824761)
chr7 (174-272)||(34578440-34578538)
chr7 (12-111)||(3601740-3601839)
chr7 (9-91)||(24139139-24139221)
chr7 (132-177)||(3601683-3601728)
[»] chr5 (19 HSPs)
chr5 (12-299)||(20204855-20205142)
chr5 (13-298)||(4268000-4268285)
chr5 (12-299)||(25730708-25730995)
chr5 (30-299)||(22767275-22767544)
chr5 (33-295)||(11375534-11375796)
chr5 (12-299)||(12660216-12660503)
chr5 (12-299)||(26597457-26597744)
chr5 (12-299)||(8387986-8388273)
chr5 (12-299)||(15988749-15989036)
chr5 (13-299)||(27292334-27292620)
chr5 (7-299)||(41940732-41941024)
chr5 (12-254)||(34652254-34652495)
chr5 (12-299)||(27532906-27533194)
chr5 (94-296)||(37448028-37448230)
chr5 (147-279)||(30222934-30223066)
chr5 (12-168)||(32632546-32632702)
chr5 (30-102)||(30222856-30222928)
chr5 (260-298)||(16074637-16074675)
chr5 (12-81)||(23074950-23075019)
[»] chr4 (20 HSPs)
chr4 (12-299)||(49951213-49951500)
chr4 (12-299)||(2064753-2065040)
chr4 (12-299)||(55734909-55735196)
chr4 (12-299)||(28537787-28538072)
chr4 (12-299)||(18442147-18442432)
chr4 (31-299)||(21321427-21321697)
chr4 (12-299)||(37245852-37246139)
chr4 (12-299)||(29655666-29655952)
chr4 (12-299)||(32577048-32577334)
chr4 (12-299)||(41835311-41835598)
chr4 (12-299)||(51734972-51735258)
chr4 (59-299)||(56065529-56065769)
chr4 (12-299)||(28426096-28426370)
chr4 (12-299)||(49119400-49119674)
chr4 (12-295)||(51259529-51259813)
chr4 (12-299)||(43840306-43840594)
chr4 (12-174)||(26422602-26422764)
chr4 (12-172)||(47226330-47226490)
chr4 (12-166)||(44936082-44936236)
chr4 (31-102)||(24989952-24990023)
[»] chr1 (15 HSPs)
chr1 (13-298)||(44527154-44527439)
chr1 (12-299)||(25682551-25682838)
chr1 (12-299)||(48949724-48950011)
chr1 (12-299)||(4395059-4395345)
chr1 (12-299)||(5609239-5609526)
chr1 (12-298)||(51113216-51113502)
chr1 (24-287)||(48166149-48166412)
chr1 (13-278)||(52109375-52109639)
chr1 (12-299)||(16816797-16817086)
chr1 (12-291)||(36733604-36733883)
chr1 (12-186)||(44602765-44602939)
chr1 (165-295)||(24538414-24538544)
chr1 (12-116)||(2885306-2885410)
chr1 (12-100)||(24538586-24538674)
chr1 (12-97)||(21031251-21031336)
[»] chr3 (14 HSPs)
chr3 (13-298)||(53496933-53497218)
chr3 (12-296)||(55199414-55199698)
chr3 (12-254)||(42340277-42340519)
chr3 (63-299)||(48227313-48227550)
chr3 (12-299)||(46007201-46007486)
chr3 (144-286)||(647343-647485)
chr3 (12-186)||(11020180-11020354)
chr3 (31-155)||(647182-647306)
chr3 (12-295)||(2615397-2615670)
chr3 (147-279)||(27941129-27941261)
chr3 (12-108)||(27608903-27608999)
chr3 (12-108)||(24176861-24176957)
chr3 (12-108)||(34497372-34497468)
chr3 (12-109)||(31341725-31341826)
[»] chr8 (13 HSPs)
chr8 (13-299)||(23853832-23854118)
chr8 (12-299)||(13414923-13415210)
chr8 (12-299)||(8451123-8451410)
chr8 (12-299)||(478056-478343)
chr8 (12-243)||(185591-185820)
chr8 (12-299)||(7127123-7127410)
chr8 (12-216)||(40588730-40588934)
chr8 (12-251)||(37712027-37712260)
chr8 (12-117)||(33642764-33642869)
chr8 (12-109)||(598237-598334)
chr8 (12-99)||(11870364-11870451)
chr8 (124-184)||(9496797-9496857)
chr8 (258-299)||(40588961-40589002)
[»] chr6 (11 HSPs)
chr6 (12-299)||(14680059-14680349)
chr6 (12-299)||(15605994-15606281)
chr6 (12-299)||(28107039-28107326)
chr6 (13-254)||(29368057-29368296)
chr6 (30-267)||(15053193-15053430)
chr6 (12-206)||(19690879-19691073)
chr6 (12-216)||(30801991-30802195)
chr6 (16-216)||(11731673-11731870)
chr6 (12-89)||(34104465-34104542)
chr6 (12-53)||(21944628-21944669)
chr6 (12-101)||(27443029-27443117)
[»] scaffold0446 (1 HSPs)
scaffold0446 (59-299)||(86-326)
[»] scaffold0922 (1 HSPs)
scaffold0922 (12-183)||(264-434)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-101)||(44244-44332)


Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 12130638 - 12130925
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12130638 ataatactagaaataatagcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 12130737  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12130738 tccatctatttgcatcagcaaagtgaagagcctcaagtaaggctactgcctccccctccaacactatcatatttgctcgctgtcatttcgtttgagcccg 12130837  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12130838 aataatttgcccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 12130925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 88746 - 88459
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||||| |||| ||| |||||||||||||||||||||||  |   ||| ||||||||||| ||||||||||||||||| |||||||||| |||||| |    
T  88746 ataatactggaaacaatagcatagaattctgaatcaccatgatcttgagacgatagagcttgcactagagtagatgagtcggactcgaagacaacccggt 88647  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||||    
T  88646 cccatctgttagcatcaacaaagtgaagggcctcgagtaaggctactgcctccccctccaaaactgtcatatttgcccattgccatttcatttgagcccg 88547  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || |||||| |||||||||||||||||  |||||| |  |||||||||||||||||||||||  ||||||||||||||||||    
T  88546 aataaattgcccgcgagagtctctaacacaacatgcaaaagttgtaatatggttacggtcatggaacgcagcatccacattgcacttc 88459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 15 - 299
Target Start/End: Original strand, 34695907 - 34696189
Alignment:
Q  15 atactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgattcc 114  Q
    |||||||||| ||| ||||| ||||||||||||||||| |||| ||| ||||  ||||| ||||||||||  ||||| |||||||||| |||||| | ||    
T  34695907 atactagaaacaatagcataaaattctgaatcaccatgacccggagacgataacgcttgcactagagtagcggagtcggactcgaagacaacccgttccc 34696006  T
Q  115 atctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaat 214  Q
    |||||||  ||||| |||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||| || || ||  ||| ||||||||||||    
T  34696007 atctattgacatcagcaaagtgaatggccttgagtaaggctactgcctccccctccaaaactgtcatatttgcccgctgcca--tcgattgagcccgaat 34696104  T
Q  215 aatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    || || ||| |||||||||||||| |||||| ||||||||  |||||| ||| |||||||||| | ||||||||| ||| |||||    
T  34696105 aaattgcccacgggagtctctaacgcaacacgcaaaagatgtaatatgcttatggtcatggaatgtggcatccacgttgtacttc 34696189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 15 - 299
Target Start/End: Original strand, 34718319 - 34718601
Alignment:
Q  15 atactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgattcc 114  Q
    |||||||||| ||| ||||| ||||||||||||||||| |||| ||| ||||  ||||| ||||||||||  ||||| |||||||||| |||||| | ||    
T  34718319 atactagaaacaatagcataaaattctgaatcaccatgacccggagacgataacgcttgcactagagtagcggagtcggactcgaagacaacccgttccc 34718418  T
Q  115 atctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaat 214  Q
    |||||||  ||||| |||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||| || || ||  ||| ||||||||||||    
T  34718419 atctattgacatcagcaaagtgaatggccttgagtaaggctactgcctccccctccaaaactgtcatatttgcccgctgcca--tcgattgagcccgaat 34718516  T
Q  215 aatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    || || ||| |||||||||||||| |||||| ||||||||  |||||| ||| |||||||||| | ||||||||| ||| |||||    
T  34718517 aaattgcccacgggagtctctaacgcaacacgcaaaagatgtaatatgcttatggtcatggaatgtggcatccacgttgtacttc 34718601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 80 - 299
Target Start/End: Original strand, 18345555 - 18345773
Alignment:
Q  80 agtagatgagtcagactcgaagataacccgattccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtc 179  Q
    |||||||||||| || ||||||| ||  |||| |||||| || |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  18345555 agtagatgagtcggattcgaagacaattcgatcccatctgttagcatcagcaaagtgaagggcctcgagtaaggctactgcctccccctcaaa-actgtc 18345653  T
Q  180 atatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacg 279  Q
    |||||||  ||||  |||||||||||||  | ||||| |||||| ||| ||||||||||||||||| |||||||   |||||||||||| ||||||||||    
T  18345654 atatttgtccgttaccatttcgtttgagttcaaataaattacccacggaagtctctaacacaacacgcaaaagaagtaatatggttacgctcatggaacg 18345753  T
Q  280 gggcatccacattgcacttc 299  Q
      || |||||||||||||||    
T  18345754 ttgcgtccacattgcacttc 18345773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 44017318 - 44017560
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||| ||||| ||||||||| |||||| ||| |||||||  || ||| ||||||||||| |||| ||||   |||||||||||||||| |||  | |    
T  44017318 ataatacaagaaacaatggcatataattcttaatgaccatgtttcggagacgatagagcttgcactaaagtaacggagtcagactcgaagacaacttggt 44017417  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
      ||| | ||  ||| | ||| |||||  || |||||||||| |  || |||||||||||| |||||||||||||| || ||||||||  ||||||||||    
T  44017418 ctcatatgttcacattagcaacgtgaatggcatcgagtaaggttgttgtctccccctccaaaactgtcatatttgcacggtgtcattttatttgagcccg 44017517  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagat 254  Q
    ||||| || ||| ||||||||||||||||||||| | ||||||    
T  44017518 aataaattgcccacgggagtctctaacacaacacgcgaaagat 44017560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 1417981 - 1418156
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccat-gtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccga 110  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||| || ||  |||||||||| |||||||||||||||||||||||||||| |||||      
T  1417981 ataatactagaaacaatagcatagaattctgaatcaccatagtccaga-gacaatagagcttgaactagagtagatgagtcagactcgaagacaacccag 1418079  T
Q  111 ttccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgc 187  Q
    | |||||| ||||||||| ||||   ||   |||||||||||||||||| ||| |||| ||  || |||||||||||    
T  1418080 tcccatctgtttgcatcagcaaatcaaattacctcgagtaaggctactgtctctcccttcataaccgtcatatttgc 1418156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 9709998 - 9709912
Alignment:
Q  130 caaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataa 216  Q
    |||||||||  || ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| ||||||    
T  9709998 caaagtgaatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgttcgttgccatttcgtttgagcctgaataa 9709912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 22845725 - 22845600
Alignment:
Q  10 agataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccg 109  Q
    ||||||||||||||| ||| || ||||||||||||||||||||  | | ||| ||||||||||| |||||||||||| |||  |||||||||| ||||||    
T  22845725 agataatactagaaacaatagcctagaattctgaatcaccatgatctggagacgatagagcttgcactagagtagattagttggactcgaagacaacccg 22845626  T
Q  110 attccatctatttgcatcaacaaagt 135  Q
     | |||||| || |||||| ||||||    
T  22845625 gtcccatctgttcgcatcagcaaagt 22845600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 9710142 - 9710032
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||||||| ||||| |||||||||||  || ||||||||||| |||||||||    ||||||||||||||| |||||| |    
T  9710142 ataatactagaaacaattgcatagaattatgaattaccatgtcccgctgacgatagagcttgcactagagtatcaaagtcagactcgaagacaacccggt 9710043  T
Q  112 tccatctattt 122  Q
     ||||||||||    
T  9710042 cccatctattt 9710032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 11292063 - 11292181
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||| ||| |||  |||| |||| ||||||| |||| || ||| | ||||||||||| ||||||||||||||||| ||||| |||| ||||   |    
T  11292063 ataatactataaacaataacataaaattttgaatcatcatggcc-gaaaacgatagagcttgcactagagtagatgagtcggactcaaagacaacc--gt 11292159  T
Q  112 tccatctatttgcatcaacaaa 133  Q
    ||||||||||||||||||||||    
T  11292160 tccatctatttgcatcaacaaa 11292181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 13109869 - 13110006
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||||| |||| ||| || || |||||  |||||||||| |||||||| ||||||||||  ||||||||||| ||||| |||||||||| ||||   |    
T  13109869 ataatactggaaacaatagcttataattccaaatcaccatggcccgaagacgatagagcttccactagagtagaagagtcggactcgaagacaaccatgt 13109968  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagt 149  Q
     ||||||  | |||||| | |||||||| |||||||||    
T  13109969 cccatctgatcgcatcagctaagtgaagggcctcgagt 13110006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 26198742 - 26198638
Alignment:
Q  150 aaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaa 249  Q
    ||||||||||| ||||||||||| ||||||||||||| ||| |  |||||  ||||||| ||||||| || ||| |  |||||||||||||| ||| |||    
T  26198742 aaggctactgcatccccctccaaaactgtcatatttgttcgctaccattttatttgagctcgaataaattgcccacatgagtctctaacacagcacacaa 26198643  T
Q  250 aagat 254  Q
    |||||    
T  26198642 aagat 26198638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 14827267 - 14827158
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||| || ||||||| ||||||||||  ||||||||||| ||| || | ||||||||||| |||||||||| | ||||||| || |||| ||| ||||    
T  14827267 ataatattataaataatagcatagaatttcgaatcaccatgacccaaacacgatagagcttgcactagagtagctaagtcagattcaaagacaactcgat 14827168  T
Q  112 tccatctatt 121  Q
      ||||||||    
T  14827167 ctcatctatt 14827158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 26198874 - 26198779
Alignment:
Q  7 ggtagataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaaga 102  Q
    |||| ||||||||||||| ||| ||||||||||   | |||||||| ||   ||| ||||||||||| |||||||||| |||||| ||||||||||    
T  26198874 ggtaaataatactagaaacaatagcatagaatttcaattcaccatgacctagagacgatagagcttgcactagagtagctgagtcggactcgaaga 26198779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 35158845 - 35158894
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaaga 61  Q
    |||||| |||||| ||| |||||||||||||||||| |||| ||||||||    
T  35158845 ataataatagaaacaatagcatagaattctgaatcatcatggcccgaaga 35158894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 3e-85; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 16732120 - 16731833
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||| |||||||||| ||| || |    
T  16732120 ataatactagaaacaatagcagagaattctgaatcaccatggcccggagatgatagagcttgcactagagtagacgagtcggactcgaagacaactcggt 16732021  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| || |||||| || ||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |  || |||||||||||||||||    
T  16732020 tccatctgttcgcatcagcagagtgaatggcctcgagtaaggctactgcctccccctccaatactgtcatatttgccctctgccatttcgtttgagcccg 16731921  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || ||||||||| ||||||||||||||  ||||||||  ||||||||| ||||||||||||  |||||||||||||||||||    
T  16731920 aataaattgcccgcgggaatctctaacacaacatgcaaaagatgtaatatggttgcggtcatggaacacggcatccacattgcacttc 16731833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 17710254 - 17709967
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||| |||||||||| ||| || |    
T  17710254 ataatactagaaacaatagcagagaattctgaatcaccatggcccggagatgatagagcttgcactagagtagacgagtcggactcgaagacaactcggt 17710155  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| || |||||| || ||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |  || |||||||||||||||||    
T  17710154 tccatctgttcgcatcagcagagtgaatggcctcgagtaaggctactgcctccccctccaatactgtcatatttgccctctgccatttcgtttgagcccg 17710055  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || ||||||||| ||||||||||||||  ||||||||  ||||||||| ||||||||||||  |||||||||||||||||||    
T  17710054 aataaattgcccgcgggaatctctaacacaacatgcaaaagatgtaatatggttgcggtcatggaacacggcatccacattgcacttc 17709967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 299
Target Start/End: Complemental strand, 16098676 - 16098390
Alignment:
Q  13 taatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgatt 112  Q
    |||||||||||| |||  |||||||||||||||||||||| |||| ||| ||| ||||||| ||||||||||||||||| |||||||||| |||||| |     
T  16098676 taatactagaaacaatatcatagaattctgaatcaccatggcccggagacgatggagcttgtactagagtagatgagtcggactcgaagacaacccggtc 16098577  T
Q  113 ccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccga 212  Q
    |||| | || |||||| |||| ||||| ||||| |||||||||||| |||| |||||||| | ||||||||||| |||||  ||||||||||||||||||    
T  16098576 ccatttgttagcatcagcaaattgaagggcctctagtaaggctactacctctccctccaaaattgtcatatttgttcgtttccatttcgtttgagcccga 16098477  T
Q  213 ataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    |||| || ||   |||||||||||||||||||| |||||||   |||||||||||||||||||||||  || |||||||||||||||    
T  16098476 ataaattgcctatgggagtctctaacacaacacgcaaaagaagtaatatggttacggtcatggaacgatgcgtccacattgcacttc 16098390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 9328602 - 9328888
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||  |||||||||||||||| |||||||||||  || ||||||||||| |||||||||   ||||||||||| |||| |||||| |    
T  9328602 ataatactagaaacaaacgcatagaattctgaattaccatgtcccgctgacgatagagcttgcactagagtatcagagtcagactccaagacaacccggt 9328701  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||| ||||| ||||||||| |||  |||||||||||||||||||||||||||| || ||||||||| | ||||| |||||||||||||| ||    
T  9328702 cccatctgtttacatcagcaaagtgaatagcagcgagtaaggctactgcctccccctccaaaacagtcatattttcccgttgccatttcgtttgagctcg 9328801  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||  || ||||| ||||||||||||||| |||| |||  || |||||||||||||||||||| |||||||||||| ||||||    
T  9328802 aataaattgtcc-cgggaatctctaacacaacacgcaaatgatgtaagatggttacggtcatggaacgcggcatccacattacacttc 9328888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 12 - 298
Target Start/End: Complemental strand, 22289428 - 22289142
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| ||||||||||||||||| |||| ||| ||||| ||||| |||||||||| |||||| |||||||||| | |||| |    
T  22289428 ataatactagaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagtcggactcgaagacagcccggt 22289329  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||| | ||  || |  |||||||||  || ||||||||||| ||  ||||||||||||| |||||||||||||||||||| |||||||| |||| |||    
T  22289328 cccatttgttcccaacggcaaagtgaatggcatcgagtaaggcaaccacctccccctccaaaactgtcatatttgctcgttgccatttcgtctgagtccg 22289229  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcactt 298  Q
    ||| | || ||| ||||| ||||||||||||||| | ||||||  |||||| | ||||||||| |||| ||||||||||||||||||    
T  22289228 aatgaattgcccacgggaatctctaacacaacacgcgaaagatgtaatatgttgacggtcatgaaacgcggcatccacattgcactt 22289142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 1581803 - 1581515
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||| || ||| ||||||||||||||  |||||||||||  ||| ||| ||||||| ||| | ||| ||||||||||  ||||| || | ||||||||    
T  1581803 ataatattataaacaatggcatagaatttcgaatcaccatggtccggagacgatagagtttgcattagtgtagatgagttggactccaatagaacccgat 1581704  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccc-tccaacactgtcatatttgctcgttgtcatttcgtttgagccc 210  Q
      ||||| || |||||| |||||||||| |||||||||||||||||||| |||||| || || ||| | |||||||| |  || ||||||||||||||||    
T  1581703 ctcatctgttcgcatcagcaaagtgaagggcctcgagtaaggctactgcatcccccctcaaaaactataatatttgccctctgccatttcgtttgagccc 1581604  T
Q  211 gaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    | ||||  || |||| |||||||||| |||||||| ||||||||  |||||||||| ||||||||||||  ||||||||||||||||||    
T  1581603 ggataaactatccgctggagtctctagcacaacacgcaaaagatgtaatatggttatggtcatggaacgcagcatccacattgcacttc 1581515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 29200955 - 29201159
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||  ||| ||||||||||| |||||||||| ||||||||||||||||| |||||| |    
T  29200955 ataatactagaaacaatagcatagaattctgaatcaccatggcccagagacgatagagcttgcactagagtagctgagtcagactcgaagacaacccgtt 29201054  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| ||  ||||| |||||||||   | || |||||   | || ||||||||||||| |||||||||||||  || ||||||||||||||||||||    
T  29201055 tccatctgttcacatcagcaaagtgaatgacatcaagtaaacatgctacctccccctccaaaactgtcatatttgtccgctgtcatttcgtttgagcccg 29201154  T
Q  212 aataa 216  Q
    |||||    
T  29201155 aataa 29201159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 295
Target Start/End: Complemental strand, 17877520 - 17877312
Alignment:
Q  87 gagtcagactcgaagataacccgattccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttg 186  Q
    |||||||||||||||| ||||||||||||||| || ||||    ||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||     
T  17877520 gagtcagactcgaagacaacccgattccatctgttcgcatttgtaaagtgaagggccttgagtaaggctacttcctccccctccaatactgtcatatttc 17877421  T
Q  187 ctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatc 286  Q
    | || ||  ||||||||||||| ||||| |  | |||  |||||||| |||| | |||| ||| | ||  |||||||||||  |||||||||| | ||||    
T  17877420 cccgctgcgatttcgtttgagcacgaatgaacttcccatgggagtctataacgccacacgcaacaaatgtaatatggttacaatcatggaacgcgacatc 17877321  T
Q  287 cacattgca 295  Q
    |||||||||    
T  17877320 cacattgca 17877312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 298
Target Start/End: Original strand, 30493610 - 30493895
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||| ||| ||| ||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||  |||||| |||||||||| |||| | |    
T  30493610 ataatactataaacaatagcataaaattctgaatcaccatggcccgaagacgatagagcttgcactagagtaattgagtcggactcgaagacaacctggt 30493709  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
      ||||| ||   |||| | |||||||   | || |||||||||||||||| ||||||||| ||||||||| |||   | || ||||||||||||||| |    
T  30493710 ctcatctgttcatatcagctaagtgaacgacatcaagtaaggctactgcct-cccctccaaaactgtcatacttgtctgctgccatttcgtttgagcctg 30493808  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcactt 298  Q
    | ||| || |||  | || | ||||||||||||| ||||| ||  ||  ||||||| ||||||||| | | |||||| |||||||||    
T  30493809 agtaaattgcccatgagaatttctaacacaacacgcaaaatatgtaagttggttacagtcatggaatgcgacatccatattgcactt 30493895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 299
Target Start/End: Original strand, 30824557 - 30824761
Alignment:
Q  94 actcgaagataacccgattccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttg 193  Q
    ||||||||| |||| ||| |||||| || |||| |  ||||||||| ||||||||||||||||||||||  |||| ||| ||||||||||||   || ||    
T  30824557 actcgaagacaacctgatcccatctgttcgcattagaaaagtgaagggcctcgagtaaggctactgcct--cccttcaaaactgtcatatttatccgctg 30824654  T
Q  194 tc-atttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacatt 292  Q
    ||  |||  ||| ||||||||||| |||  ||||| ||||||||||||||||  ||||||||  ||||||  ||| |||||| || |  |||||||||||    
T  30824655 tctttttttttttagcccgaataaattattcgcggcagtctctaacacaacatgcaaaagatgtaatatgactacagtcatgaaatgtagcatccacatt 30824754  T
Q  293 gcacttc 299  Q
    |||||||    
T  30824755 gcacttc 30824761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 34578440 - 34578538
Alignment:
Q  174 actgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtca 272  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || ||| ||||| | || |||||||||| ||||||||  |||||| | |||||||    
T  34578440 actgtcatatttgctcgttgtcatttcgtctgagcccgaataaattgcccacgggaatttcgaacacaacacgcaaaagatgtaatatgttaacggtca 34578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 3601839 - 3601740
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| |||||||||||||||||  ||  ||| |||| |||||| ||||||||||||||||| |||||||| | ||||||||    
T  3601839 ataatactagaaacaatagcataaaattctgaatcaccatggtccagagacgataaagcttgcactagagtagatgagtcggactcgaaaacaacccgat 3601740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 24139221 - 24139139
Alignment:
Q  9 tagataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtc 91  Q
    |||||||||||||||| ||| ||||| ||||   ||||| |||| |||| ||| || |||||||| |||||||||| ||||||    
T  24139221 tagataatactagaaacaatagcataaaatttcaaatcaacatgacccggagacgacagagcttgcactagagtagctgagtc 24139139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 3601728 - 3601683
Alignment:
Q  132 aagtgaagagcctcgagtaaggctactgcctccccctccaacactg 177  Q
    |||||||| |||||||||||||||||  ||||||||||||| ||||    
T  3601728 aagtgaagggcctcgagtaaggctaccacctccccctccaaaactg 3601683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 3e-85; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 20205142 - 20204855
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||||||| |||||||||||| |||| ||| ||||||||||| ||||||||||||||||| |||||||||| ||| || |    
T  20205142 ataatactagaaacaatagcatagaattttgaatcaccatgacccggagaggatagagcttgcactagagtagatgagtcggactcgaagacaactcggt 20205043  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| || ||| ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| |    
T  20205042 tccatctgttcgcaacaacaaagtgaatggcctcgagtaaggctactgcctccccctccaatactgtcatatttgcccgttgccatttcgtttgagcctg 20204943  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
     |||| || |||||||||||||||| ||||| |   |||||||  |||||||||| |||||||||||| |||||||||||||||||||    
T  20204942 gataaatttcccgcgggagtctctagcacaaaatgtaaaagatgtaatatggttatggtcatggaacgcggcatccacattgcacttc 20204855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 298
Target Start/End: Complemental strand, 4268285 - 4268000
Alignment:
Q  13 taatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgatt 112  Q
    |||||||||||| ||| ||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||| |     
T  4268285 taatactagaaacaatagcatagaattccgaatcaccatggcccggagatgatagagcttgcactagagtagatgagtcggactcgaagaaaacccggtc 4268186  T
Q  113 ccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccga 212  Q
    ||| || || |||||| |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||||| ||    
T  4268185 ccacctgttagcatcagcaaagtgaagggcctctagtaaggctactgcctccccctccaaaactgtcatatttgcccgctgccattttgtttgagcctga 4268086  T
Q  213 ataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcactt 298  Q
    |||| || ||| || |||||||||||||||||| ||||||||  |||||||||||  ||| | |||| ||| ||||| ||||||||    
T  4268085 ataaattgcccacgagagtctctaacacaacacgcaaaagatgtaatatggttacaatcaagaaacgcggcgtccacgttgcactt 4268000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 25730995 - 25730708
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  ||||||||||| |||||||||| |||  ||| ||||||||||| ||||||||||||||||| |||||||||| ||| |  |    
T  25730995 ataatactagaaacaataacatagaattcttaatcaccatgaccctgagacgatagagcttgcactagagtagatgagtcggactcgaagacaactcagt 25730896  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| || |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || |||||||||||||| ||    
T  25730895 cccatctgttcgcatcagcaaagtgaagggcctcgagtaaggctactgcctccccctccaaaactgtcatatttgcccgctgccatttcgtttgagctcg 25730796  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || |||||| ||| ||||||||||||||   |||  |  ||||||||||||||||||||||| || ||||||||||||||||    
T  25730795 aataaatttcccgcgtgagactctaacacaacacgtgaaaattgtaatatggttacggtcatggaacgcggaatccacattgcacttc 25730708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 30 - 299
Target Start/End: Original strand, 22767275 - 22767544
Alignment:
Q  30 gcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgattccatctatttgcatcaa 129  Q
    |||||||||||||||| |||||||||||  || ||||||||||| |||||||||   |||||| ||||||||| |||||| | |||||| ||| |||||     
T  22767275 gcatagaattctgaattaccatgtcccgctgacgatagagcttgcactagagtatcagagtcaaactcgaagacaacccggtcccatctgtttacatcag 22767374  T
Q  130 caaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcggga 229  Q
    ||||||||| |||  |||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||| || ||| |||||    
T  22767375 caaagtgaatagcagcgagtaaggctactgcctccccctccaaaacagtcatatttgcccgttgccatttcgtttgagcccgaataaattgcccccggga 22767474  T
Q  230 gtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
     ||||||||||||||| ||||||||  || ||| |||| ||||||||||| |||||||||||||||||||    
T  22767475 atctctaacacaacacgcaaaagatgtaagatgattactgtcatggaacgcggcatccacattgcacttc 22767544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 33 - 295
Target Start/End: Original strand, 11375534 - 11375796
Alignment:
Q  33 tagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgattccatctatttgcatcaacaa 132  Q
    |||||||| |||||||||||  ||| ||| ||||||||||| |||||| ||||||| |||||||| |||| |||||| | |||| ||||||||||  |||    
T  11375534 tagaattccgaatcaccatggaccggagacgatagagcttgcactagaatagatgaatcagactcaaagacaacccggtcccatatatttgcatccgcaa 11375633  T
Q  133 agtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtc 232  Q
    | ||||| ||||||||||||||||||| |||||||||||| |||||||||||| |||| || ||||||||||||| |||||||| | ||| ||| |||||    
T  11375634 aatgaagggcctcgagtaaggctactgtctccccctccaaaactgtcatatttactcgctgccatttcgtttgagtccgaataaatcacctgcgagagtc 11375733  T
Q  233 tctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgca 295  Q
    ||||||||||||  |||||| |  |||||||||||| ||||||||||  ||||||||||||||    
T  11375734 tctaacacaacatgcaaaagttgtaatatggttacgttcatggaacgcagcatccacattgca 11375796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 12660503 - 12660216
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  ||||||||||||||||||| || |||||||| ||||||||||| |||||||||| |||||||||||||| |||||| || |    
T  12660503 ataatactagaaacaatatcatagaattctgaatcaccgtggcccgaagacgatagagcttgcactagagtagctgagtcagactcgacgataacacggt 12660404  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
      ||| | ||  ||| | |||||||||   | ||||||||| |||||||||||| ||| ||||||||||||||||| || || |||||||||||||||||    
T  12660403 ctcatttgttcacattagcaaagtgaatgacatcgagtaagactactgcctcccgctctaacactgtcatatttgcccgctgccatttcgtttgagcccg 12660304  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||  ||  |  ||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||||||||||||||||||    
T  12660303 aataaattgtccatgaaagtctctaacacaacacgcaaaagatgtaagatggttacgttcatggaacgcggcatccacattgcacttc 12660216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 26597457 - 26597744
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  |||| ||||| ||||||||||| |||| ||| ||||| ||||| |||||||||| |||||| |||||||||| |||||| |    
T  26597457 ataatactagaaacaataacataaaattccgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacccggt 26597556  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
      ||||||||  || |  |||||||||  || ||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  26597557 ctcatctattcccaactgcaaagtgaatggcatcgagtaaggcaactgcctccccctccaaaattgtcatatttgctcgttgccatttcgtttgagcccg 26597656  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||| | ||  || ||||||||||||||||||||| | ||||||  |||||| | | | ||||| |||| |||||||||||||||||||    
T  26597657 aatgaattgtccacgggagtctctaacacaacacgcgaaagatgtaatatgttgatgatcatgaaacgcggcatccacattgcacttc 26597744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 8388273 - 8387986
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||||| |||| ||| ||||| ||||||||||||||||| || | ||| ||||| ||||| |||||||||| |||||| |||||||||| |||||| |    
T  8388273 ataatactggaaacaatagcataaaattctgaatcaccatggcctggagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacccggt 8388174  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||  || |  |||||||||  || ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |    
T  8388173 cccatctgttcccaaccgcaaagtgaatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgttcgttgccatttcgtttgagcctg 8388074  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||| | || ||| || |||||||||||||||||| | ||||||  |||||  | ||||||||| |||| ||||||||||||| |||||    
T  8388073 aatgaattgcccacgagagtctctaacacaacacgcgaaagatgtaatattttaacggtcatgaaacgcggcatccacattgtacttc 8387986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 15988749 - 15989036
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  |||||||||| ||||||||||| || ||||| ||||||| ||| |||||||||| |||| | |||| ||||| |||||| |    
T  15988749 ataatactagaaacaataacatagaattccgaatcaccatggcctgaagacgatagagattgcactagagtagctgagacggacttgaagacaacccggt 15988848  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||| | || |||||| |||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||  || || |||||||||||||||||    
T  15988849 cccatatgttcgcatcagcaaagtaaagggcctcgagtaaggttactgcctccccctccaaaactgtcatatttgtccgctgccatttcgtttgagcccg 15988948  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || | ||||  ||||||| ||| ||||| |||||| |  ||||||||| ||||||||||||| | |||||| ||| ||||||    
T  15988949 aataaattgctcgcgaaagtctctgacataacacgcaaaagttgtaatatggttgcggtcatggaacgcgacatccatatttcacttc 15989036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 299
Target Start/End: Complemental strand, 27292620 - 27292334
Alignment:
Q  13 taatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgatt 112  Q
    |||||||||||| ||| ||||| |||||  |||||||||| || | ||| ||||||| ||| ||||||| |||||||||  ||||||||| |||||| |     
T  27292620 taatactagaaacaatagcataaaattccaaatcaccatggcctggagacgatagagtttgcactagagcagatgagtcgaactcgaagacaacccggtc 27292521  T
Q  113 ccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccga 212  Q
    |||||| ||  ||||| |||||||||| || || |||||||||| ||||||||||| ||| ||  | |||||||  || || ||||| ||||||||||||    
T  27292520 ccatctgttatcatcagcaaagtgaagggcatctagtaaggctattgcctcccccttcaaaacaataatatttgtccgctgccattttgtttgagcccga 27292421  T
Q  213 ataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    |||| || ||| || |||||||||||||||||  ||||| ||  |||||||||||  |||||||||| | |||||||||||||||||    
T  27292420 ataaattgcccacgagagtctctaacacaacatgcaaaatatgtaatatggttactatcatggaacgtgacatccacattgcacttc 27292334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 41940732 - 41941024
Alignment:
Q  7 ggtagataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataac 106  Q
    |||| ||||||||||||| ||| ||||||||||||||||||| |||  ||  ||| ||||||| ||| |||||||||| |||||| |||||||||| |||    
T  41940732 ggtaaataatactagaaacaatagcatagaattctgaatcacaatggtccagagacgatagagtttgcactagagtagttgagtcggactcgaagacaac 41940831  T
Q  107 ccgattccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttg-ctcgttgtcatttcgtttg 205  Q
    ||| | |||  | ||  ||| | |||||||||   | | ||||||||||| || |||||||||||| ||||||||||||  ||   ||||||||||||||    
T  41940832 ccggt-ccagttgttcacatgagcaaagtgaatgacattgagtaaggctattgtctccccctccaaaactgtcatatttttctatatgtcatttcgtttg 41940930  T
Q  206 agcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||| ||||||| || ||| ||||||||| |||||| |||| ||||||||  || || ||||||||||||||||| |||||||||||||||||||    
T  41940931 agctcgaataaatttcccacgggagtctttaacactacacacaaaagatgtaagatagttacggtcatggaacgcggcatccacattgcacttc 41941024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 34652254 - 34652495
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  |||| ||||||||||||||||| |||  ||| | ||||||||| ||||||||||  ||||| | |||||||| ||||||||    
T  34652254 ataatactagaaacaataacatataattctgaatcaccatggcccagagacggtagagcttgcactagagtagtcgagtcgggctcgaagacaacccgat 34652353  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||  ||||  |||||||||  || |||||||||| || |  |||||| | ||||||||||||||||||||| || | ||| ||||||| |||    
T  34652354 cccatctgttcacatcggcaaagtgaatggcatcgagtaaggttattatctccccttacaacactgtcatatttgctcgctg-ccttttgtttgagaccg 34652452  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagat 254  Q
     |||| || ||| ||||||||||||||||||||| ||||||||    
T  34652453 gataaattgcccacgggagtctctaacacaacacacaaaagat 34652495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 27532906 - 27533194
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||||| |||| ||| ||| ||||||||||||||||||| |||| ||| |||| ||  || |||| || ||   |||| |||||||| | |||||| |    
T  27532906 ataatacttgaaacaatagcaaagaattctgaatcaccatgacccggagacgataaagtctgcactaaagaagcaaagtcggactcgaaaacaacccggt 27533005  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||||||  ||||| |||||||||   | |||| ||| |||| ||||||||||||||| ||||| |||||| |  | |  |||||||||||||||||    
T  27533006 cccatctattcacatcagcaaagtgaatgacatcgaataaagctattgcctccccctccaaaactgttatattttcctgctaccatttcgtttgagcccg 27533105  T
Q  212 aataatttacccgcgggagtctctaacacaacac-ccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || ||| ||||||||||||||||||||| | |||||||  ||  |||||||| |||||||||| | |||||||||| ||||||    
T  27533106 aataaattgcccacgggagtctctaacacaacacgcaaaaagatgtaaactggttacgatcatggaacgcgacatccacattacacttc 27533194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 296
Target Start/End: Complemental strand, 37448230 - 37448028
Alignment:
Q  94 actcgaagataacccgattccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttg 193  Q
    ||||||||| |||||| |||||||| ||  ||||| |||||||||   | |||||||||||||| |||||||| | |||||||||||| ||||| || ||    
T  37448230 actcgaagacaacccggttccatctgttcacatcagcaaagtgaatgacatcgagtaaggctaccgcctcccctttcaacactgtcatgtttgcacgctg 37448131  T
Q  194 tcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattg 293  Q
     ||||| ||||||| |||||||  ||  || || |||||||||||||||||   ||| |||  || ||||||| |||||||||||  | ||||||||| |    
T  37448130 ccattttgtttgagtccgaatacattgtccacgagagtctctaacacaacatataaacgatgtaagatggttatggtcatggaacacgacatccacatcg 37448031  T
Q  294 cac 296  Q
    |||    
T  37448030 cac 37448028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 30222934 - 30223066
Alignment:
Q  147 agtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacc 246  Q
    ||||| ||||||| ||||| |||||| ||||||| ||| ||| | ||  | ||||||||||||||||||| || |||  || |||||||||||||||||     
T  30222934 agtaaagctactgtctccctctccaaaactgtcaaattcgcttgctgcaaattcgtttgagcccgaataaattgcccatggaagtctctaacacaacacg 30223033  T
Q  247 caaaagatagaatatggttacggtcatggaacg 279  Q
    ||||||||  ||||||||||| |||||||||||    
T  30223034 caaaagatgtaatatggttacagtcatggaacg 30223066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 32632702 - 32632546
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||| |||||| |||| |||||||||||||||||| ||| | || ||| |||| |||||  |||| |||||||||||||||||| |||| |||||| |    
T  32632702 ataatattagaaacaatgtcatagaattctgaatcactatggctcggagacgataaagcttacactaaagtagatgagtcagactcaaagacaacccggt 32632603  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccct 168  Q
    |  ||||||| | ||||  ||| ||||  ||||||||||||| || || ||||||||    
T  32632602 ttaatctattcgtatcagtaaaatgaaaggcctcgagtaaggttattgtctccccct 32632546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 30222856 - 30222928
Alignment:
Q  30 gcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaaga 102  Q
    ||||||||||| |||||||| || |||||||| ||||| ||||| |||||||||| ||||||||| |||||||    
T  30222856 gcatagaattccgaatcaccgtgacccgaagacgatagcgcttgcactagagtagctgagtcagattcgaaga 30222928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 16074675 - 16074637
Alignment:
Q  260 atggttacggtcatggaacggggcatccacattgcactt 298  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  16074675 atggttacgttcatggaacgcggcatccacattgcactt 16074637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 23075019 - 23074950
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagag 81  Q
    ||||||||| ||| |||  ||||||||| ||||||||||||  ||||||| |||| |||||| |||||||    
T  23075019 ataatactataaacaataacatagaattatgaatcaccatggaccgaagacgataaagcttgcactagag 23074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 7e-83; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 49951500 - 49951213
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||| ||||||||||||||||| | ||||||||||||| |||||| ||||||||||| ||||| |||||||||| ||| || |    
T  49951500 ataatactagaaacaatagcagagaattctgaatcaccacggcccgaagatgataaagcttgcactagagtagacgagtcggactcgaagacaactcggt 49951401  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| || |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||    
T  49951400 tccatctgttcgcatcagcaaagtgaagggcctcgagtaaggctactgcctccccctccaatactgtcatatttgcccgctgccatttcgtttgagcccg 49951301  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||  ||||| || ||||||||||| ||  ||||||||  ||||||||| ||||||||||| | |||||||||||||||||||    
T  49951300 aataaattggccgcgagaatctctaacacagcatgcaaaagatgtaatatggttgcggtcatggaatgcggcatccacattgcacttc 49951213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 2065040 - 2064753
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| ||||  ||||||||||| || | ||| |||||||||||| |||||||||||||||| ||||| |||| |||||||     
T  2065040 ataatactagaaacaatagcatataatttcgaatcaccatgacctggagacgatagagcttgggctagagtagatgagtccgactcaaagacaacccgac 2064941  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| ||  ||||| |||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||| || |||||||| |||||||||||    
T  2064940 tccatctgttctcatcagcaaagtgaagggcgtcgagtaaggctactgcctcccccttcaatactgtcatatttgcccgctgtcattttgtttgagcccg 2064841  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||| |||||||||||||||||||||||| || | |||  ||||||||||||||||||||||| ||| |||||||||||||||    
T  2064840 aataaattatccgcgggagtctctaacacaacacgcagaggatgtaatatggttacggtcatggaacgtggcgtccacattgcacttc 2064753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 55735196 - 55734909
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||||| || |||||||| |||||||| |    
T  55735196 ataatactagaaacaatagcatagaattctgaatcaccatggtccgaagacgatagagcttgcactagagtagatgaatcggactcgaaaataacccggt 55735097  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||| | || ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |  |||||||||||||||||    
T  55735096 tccatgtgttcgcaacaacaaagtgaagggcctcgagtaaggctactgcctccccctccaatactgtcatatttgctcgcttccatttcgtttgagcccg 55734997  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    || || || | |  |||||||||||||||||||| ||||||||  |||||||||  | ||||||| || | |||||||||||||||||    
T  55734996 aacaaattgctcatgggagtctctaacacaacacgcaaaagatgtaatatggttgagatcatggagcgcgacatccacattgcacttc 55734909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 28537787 - 28538072
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||||||| |||||||||||| |||  ||| ||||||||||| |||| |||||||||||| |||| ||| | |||||| |    
T  28537787 ataatactagaaacaatagcatagaattttgaatcaccatggcccagagacgatagagcttgcactaaagtagatgagtcggacttgaacacaacccggt 28537886  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||  | ||| |||||||| | || || |||||||||||||||||    
T  28537887 cccatctgttcgcatcaacaaagtgaagggcctcgagtaaggctactgcctccccctc--aaactatcatattttcccgctgccatttcgtttgagcccg 28537984  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || |||| |||||||||||||||||||| ||||| ||  |||||||||||| ||||||||||  ||||||||||||||||||    
T  28537985 aataaattgcccgtgggagtctctaacacaacacgcaaaatatgtaatatggttacgatcatggaacgcagcatccacattgcacttc 28538072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 18442147 - 18442432
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||||||||||||||||||||  || |||| |||| |||||| |||||  ||||||||||  ||||||| |||||||| |    
T  18442147 ataatactagaaacaatagcatagaattctgaatcaccatgggccaaagacgatatagcttgcactag--tagatgagtcgcactcgaaaataacccggt 18442244  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| || ||| || ||||||| || |||||||||||||||||||||||||||||||| |||||||||||| | || |  |||||||||||||||||    
T  18442245 tccatctgttcgcaacagcaaagtgtagggcctcgagtaaggctactgcctccccctccaatactgtcatattttcccgcttccatttcgtttgagcccg 18442344  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || |||  |||||||||||||||||||| |||||| |  ||||||||| ||||||||||||| | ||||| |||||||||||    
T  18442345 aataaattgcccatgggagtctctaacacaacacgcaaaagttgtaatatggttgcggtcatggaacgcgacatccgcattgcacttc 18442432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 31 - 299
Target Start/End: Complemental strand, 21321697 - 21321427
Alignment:
Q  31 catagaattctgaatcaccatgtcccgaagatgatagagc--ttggactagagtagatgagtcagactcgaagataacccgattccatctatttgcatca 128  Q
    |||||||||||||||||||||| |||  |||  |||||||  ||| ||||||||||||||||| |||||||||| |||||| | |||||| || ||||||    
T  21321697 catagaattctgaatcaccatgaccctgagacaatagagcaattgcactagagtagatgagtcggactcgaagacaacccggtcccatctgttagcatca 21321598  T
Q  129 acaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcggg 228  Q
      ||||||||| |||||||||||||||| || |||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| || |||||| |    
T  21321597 gaaaagtgaagggcctcgagtaaggctattgtctccccctccaaaactgtcatatttgcccgttgccatttcgtttgagcccgaataaatttcccgcgag 21321498  T
Q  229 agtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||||||| ||||||  |||||| |  |||||||||||||||||||||||   |||||||||||||||||    
T  21321497 agtctctaatacaacatgcaaaagttgtaatatggttacggtcatggaacgcaacatccacattgcacttc 21321427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 37245852 - 37246139
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||  ||| || |||||||| |||| |||||  |||||||||||||||| |||||| |    
T  37245852 ataatactagaaacaatagcatagaattctgaatcaccatggcccagagacgaaagagcttgcactaaagtagcagagtcagactcgaagacaacccggt 37245951  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||  ||| | ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||| |||||    
T  37245952 cccatctgttcacataagcaaagtgaatagcatcgagtaaggctactgcctccccctccaaaactgtcatatttgcccgtttccatttcgtttgtgcccg 37246051  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || ||| ||||||||||||||||||||  || | |||  || | | |||||||||||||||| |||||||||||||||||||    
T  37246052 aataaatttccctcgggagtctctaacacaacatgcagaggatgtaagacgattacggtcatggaacgcggcatccacattgcacttc 37246139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 29655666 - 29655952
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  |||||||||||||||||||||| |||||||||||||||||||| ||||||||||   ||||||||||||||| ||| || |    
T  29655666 ataatactagaaacaataacatagaattctgaatcaccatggcccgaagatgatagagcttgcactagagtagcgtagtcagactcgaagacaacacggt 29655765  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| ||  ||||| |||||||||   | |||||||||||||||||||| |||||||| || ||||||||||| || || ||||| |||||||||||    
T  29655766 tccatctgttcacatcagcaaagtgaatgacatcgagtaaggctactgcctctccctccaaaacagtcatatttgcccgctgccattttgtttgagcccg 29655865  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || ||| |||||| |||||||||||||  ||||||||  || | ||||||| |||||||||| |||||||||||| ||||||    
T  29655866 aataaattgcccacgggagcctctaacacaaca-acaaaagatgtaagagggttacgatcatggaacgcggcatccacattacacttc 29655952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 32577048 - 32577334
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||  || ||| ||||||| ||||||||||  |||||||||||||||| |||||  |    
T  32577048 ataatactataaacaatcgcatagaattctgaatcaccatgtcccgctgacgattgagcttgcactagagtagcagagtcagactcgaagacaacccagt 32577147  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||| | ||| ||||| |||||| || |||  |||||||||||| | ||||||||||||| || ||||||||||| ||||| |||||||||||||||||    
T  32577148 cccatatgtttacatcagcaaagtaaatagcagcgagtaaggctagtacctccccctccaaaacagtcatatttgcccgttgccatttcgtttgagcccg 32577247  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || ||| ||||| ||||||||||||||| ||||||||  || ||||||| ||||||||||||  ||||||||||||||||||    
T  32577248 aataaattgccc-cgggaatctctaacacaacacgcaaaagatgtaagatggttaaggtcatggaacgcagcatccacattgcacttc 32577334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 41835311 - 41835598
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||| |||| ||||||||||| |||| ||| ||||| | ||| |||||||||||||| ||  ||||||||| |||||| |    
T  41835311 ataatactagaaacaatagcataggattccgaatcaccatggcccggagacgatagcgtttgcactagagtagatgaatcgaactcgaagacaacccggt 41835410  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||||||||  |||| ||||| | |||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||| |||||||||||    
T  41835411 cccatctgtttgcatccgcaaaatgaagggtctcgagtaaggctactgcatccccctccaaaactgtcatatttgccagctgtcattttgtttgagcccg 41835510  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||  | ||| |||||||||||||||||| |||||| |  |||||||||||| ||| |||||| |||||||||||||||||||    
T  41835511 aataaattgtctgcgagagtctctaacacaacacgcaaaagttgtaatatggttacgttcaaggaacgtggcatccacattgcacttc 41835598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 51734972 - 51735258
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  ||||||||| ||||||||||||  ||  ||| ||||||||||| ||||||||||| ||| | |||||||||| ||| || |    
T  51734972 ataatactagaaacaatatcatagaattatgaatcaccatggtccagagacgatagagcttgcactagagtagaggagcctgactcgaagacaactcg-t 51735070  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     | |||||||  ||||| |||||||||  || ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||    
T  51735071 cctatctattcacatcagcaaagtgaatggcatcgagtaaggctactgcctccccctccaaaactgtcatatttgcacgctgtcatttcgtttaagcccg 51735170  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||  |  ||| ||||||||||||||||| ||||||||  || ||||||||  |||||||||| ||||||||| |||||||||    
T  51735171 aataaattgtcaacggaagtctctaacacaacacacaaaagatgtaagatggttacaatcatggaacgcggcatccacgttgcacttc 51735258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 59 - 299
Target Start/End: Complemental strand, 56065769 - 56065529
Alignment:
Q  59 agatgatagagcttggactagagtagatgagtcagactcgaagataacccgattccatctatttgcatcaacaaagtgaagagcctcgagtaaggctact 158  Q
    ||||||||| ||||| |||||||||| |||||| |||||||||| |||||| | |||| ||||  || || |||||||||  || ||||||||||| |||    
T  56065769 agatgatagcgcttgcactagagtagctgagtcggactcgaagacaacccggtcccatatattcccaacagcaaagtgaatggcatcgagtaaggcaact 56065670  T
Q  159 gcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaa 258  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||| ||||||| | ||||||  ||    
T  56065669 gcctccccctccaaaactgtcatatttgctcgttgtcatttcgtttgagcccgaatgaattgcccacgggagtctctaaaacaacacgcgaaagatgtaa 56065570  T
Q  259 tatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    |||| | ||||||||| |||  | |||||||||||||||||    
T  56065569 tatgttgacggtcatgaaacacgacatccacattgcacttc 56065529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 28426370 - 28426096
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| |||||| ||| |||||||||||  || ||||||||| | |||||||||   |||||||||| ||||| |||||| |    
T  28426370 ataatactagaaacaatcgcatataattctaaattaccatgtcccgctgacgatagagctggcactagagtatcagagtcagacttgaagacaacccggt 28426271  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||| ||||| ||||||||| |||  |||||||||||||||||||||||||||| || |||||||||||  |||| |||||||||||||||||    
T  28426270 cccatctgtttacatcagcaaagtgaatagcagcgagtaaggctactgcctccccctccaaaacagtcatatttgcctgttgccatttcgtttgagcccg 28426171  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||             ||| ||||||||||||||| ||||||||  || |||||||||||||||||||| |||||||||||||||||||    
T  28426170 aa-------------ggaatctctaacacaacacacaaaagatgtaagatggttacggtcatggaacgcggcatccacattgcacttc 28426096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 49119400 - 49119674
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| |||||| ||| |||||||||||  || ||||||||| | |||||||||   |||||||||| ||||| |||||| |    
T  49119400 ataatactagaaacaatcgcatataattctaaattaccatgtcccgctgacgatagagctggcactagagtatcagagtcagacttgaagacaacccggt 49119499  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||| ||||| ||||||||| |||  |||||||||||||||||||||||||||| || |||||||||||  |||| |||||||||||||||||    
T  49119500 cccatctgtttacatcagcaaagtgaatagcagcgagtaaggctactgcctccccctccaaaacagtcatatttgcctgttgccatttcgtttgagcccg 49119599  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||             ||| ||||||||||||||| ||||||||  || |||||||||||||||||||| |||||||||||||||||||    
T  49119600 aa-------------ggaatctctaacacaacacacaaaagatgtaagatggttacggtcatggaacgcggcatccacattgcacttc 49119674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 295
Target Start/End: Original strand, 51259529 - 51259813
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  |||| ||||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||||||| |||| | |    
T  51259529 ataatactagaaacaataacataaaattctgaatcaccatggcccgaagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacctggt 51259628  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccc-tccaacactgtcatatttgctcgttgtcatttcgtttgagccc 210  Q
     | | ||  |  || || |||||||||   | ||||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  51259629 ccgaactgatcccaacagcaaagtgaatgacatcgagtaaggcaactgcctcccccctccaaaactgtcatatttgctcgttgccatttcgtttgagccc 51259728  T
Q  211 gaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgca 295  Q
    |||| | || ||| || |||||||||||||||||  | ||||||  |||||| | ||||||||| |||| |||||||||||||||    
T  51259729 gaatgaattgcccacgagagtctctaacacaacatacgaaagatgtaatatgttgacggtcatgaaacgcggcatccacattgca 51259813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 43840306 - 43840594
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||||||||| |||||||||||  ||||||| ||||||||||| | |||||||| ||||||  ||||||||| || ||| |    
T  43840306 ataatactagaaacaatagcatagaattccgaatcaccatggtccgaagacgatagagcttgcattagagtagctgagtcgaactcgaagacaaaccggt 43840405  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaa-ggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagccc 210  Q
      ||| | ||  ||||| |||||||||  || |||||||| || |  || ||||||||||||||||||||||||||  || || |||||||||||| |||    
T  43840406 ctcatttgttcacatcagcaaagtgaatggcatcgagtaaaggttgttgtctccccctccaacactgtcatatttgtccgctgccatttcgtttgacccc 43840505  T
Q  211 gaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    |||||| ||  || |||||||||||||||||| || ||||||||  || ||||||| | |||| ||||| ||||||||| ||| |||||    
T  43840506 gaataaattgtccacgggagtctctaacacaaaacgcaaaagatgtaagatggttatgctcatagaacgcggcatccacgttgaacttc 43840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 174
Target Start/End: Original strand, 26422602 - 26422764
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||| ||| ||| ||||||||||||||||||| ||||||||  || ||||||||||| |||||||||   |||||||||||||||| ||||||||    
T  26422602 ataatactaaaaacaatcgcatagaattctgaatcactatgtcccgctgacgatagagcttgcactagagtatcagagtcagactcgaagacaacccgat 26422701  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaaca 174  Q
     |||||| ||| ||||| |||||| || ||| |||||||||||||||||||||| ||||||||    
T  26422702 cccatctgtttacatcagcaaagtaaatagcatcgagtaaggctactgcctccctctccaaca 26422764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 47226330 - 47226490
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| || |||||||||||||| || ||||| |||||||||||  ||| |||||||||||| |||||||| | ||| ||||    
T  47226330 ataatactagaaacaatagcatataaatctgaatcaccatggcctgaagacgatagagcttgctctaaagtagatgagtcggactcgaacacaactcgat 47226429  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaa 172  Q
      ||||| || |||||| ||||||||| ||||||||||||| ||| | |||||||||||||    
T  47226430 ctcatctgttcgcatcagcaaagtgaaaagcctcgagtaagactattacctccccctccaa 47226490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 44936082 - 44936236
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||| |||||| |||  ||||||||||| ||||||| || |||||| | ||||||| ||| ||||||||| ||||||| |||||||| | ||||| ||    
T  44936082 ataataatagaaacaataacatagaattctaaatcaccgtggcccgaaaacgatagagtttgcactagagtaaatgagtcggactcgaacacaacccaat 44936181  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctcccc 166  Q
    | ||||| ||||||| | |||||| |||   |||||||||||||| |||||||||    
T  44936182 ttcatctgtttgcattagcaaagtaaaggatctcgagtaaggctattgcctcccc 44936236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 24989952 - 24990023
Alignment:
Q  31 catagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaaga 102  Q
    ||||||||| ||||||||| || |||  ||| | ||||||||| |||||||||| |||||||||||| ||||    
T  24989952 catagaattttgaatcaccgtggcccagagacggtagagcttgcactagagtagctgagtcagactcaaaga 24990023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 1e-81; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 13 - 298
Target Start/End: Complemental strand, 44527439 - 44527154
Alignment:
Q  13 taatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgatt 112  Q
    |||||||||||| ||| ||||||||||| ||||||||||| |||| ||||||||||||||| || |||||||||||||| |||||||||| |||||| |     
T  44527439 taatactagaaacaatagcatagaattccgaatcaccatggcccggagatgatagagcttgcacaagagtagatgagtcggactcgaagacaacccggtc 44527340  T
Q  113 ccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccga 212  Q
    |||||| || |||||| |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||  || || ||||| ||||||||||||    
T  44527339 ccatctgttagcatcagcaaagtgaagggcctctagtaaggctactgcctccccctccaaaactgtcatatttgtccgctgccattttgtttgagcccga 44527240  T
Q  213 ataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcactt 298  Q
    |||| || ||| |  |||||||||||||||||| ||||||||  ||||||||||| ||||||||||| ||| ||||||||||||||    
T  44527239 ataaattgcccacaagagtctctaacacaacacgcaaaagatgtaatatggttacagtcatggaacgcggcgtccacattgcactt 44527154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 25682838 - 25682551
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| | |||||||||| ||||||  || |||| ||| ||||||||||| |||||||||| ||||||| ||||||||| | |||| |    
T  25682838 ataatactagaaacaatagtatagaattctaaatcactgtggcccggagacgatagagcttgtactagagtagctgagtcaaactcgaagacagcccggt 25682739  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||  ||| | |||||||||   | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||     
T  25682738 cccatctgttcacattagcaaagtgaatgacatcgagtaaggctactgcctccccctccaacactgtcatatttgcccgttgccatttcgtttgagccca 25682639  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
     |||| || ||| ||||||||||||||||||||| ||||||||  || ||||||||| ||||| |||  |||||||||||||||||||    
T  25682638 gataaattgcccacgggagtctctaacacaacacgcaaaagatgtaagatggttacgttcatgaaacacggcatccacattgcacttc 25682551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 48949724 - 48950011
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| ||||| ||||||||||| |||| ||| ||||| ||||| |||||||||| |||||   ||||||||| |||||| |    
T  48949724 ataatactagaaacaatagcataaaattccgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagttgaactcgaagacaacccggt 48949823  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||  || ||||||||||||  || ||||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  48949824 cccatctgttcccaacaacaaagtgaatcgcatcgagtaaggcaactgcctccccctccaaaactttcatatttgctcgttgccatttcgtttgagcccg 48949923  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||| | || ||  ||||||||||||||||||||| | ||||||  |||||| | ||||||||| |||| |||||||||||||||||||    
T  48949924 aatgaattgccaacgggagtctctaacacaacacgcgaaagatgtaatatgttgacggtcatgaaacgcggcatccacattgcacttc 48950011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 4395345 - 4395059
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||| ||| ||| | ||||||||||||||||||||| ||   ||| ||||||||||| ||||||||||||||||  ||||||||||||||| | |    
T  4395345 ataatactataaacaataggatagaattctgaatcaccatgaccttgagacgatagagcttgcactagagtagatgagttggactcgaagataacctggt 4395246  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     ||||||||| |||||| |||||||||| |||||||||||||||| ||||| ||||| ||| ||| |||||||||| || || ||||||| |||||||||    
T  4395245 cccatctattcgcatcagcaaagtgaagggcctcgagtaaggctagtgcct-ccccttcaaaactctcatatttgcccgctgccatttcgattgagcccg 4395147  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
     |||| || ||| || |||||||||||||| ||  |||||| |   |||||||||||||||||||||| ||| |||||||||||||||    
T  4395146 gataaattgcccacgagagtctctaacacagcatgcaaaagttgtgatatggttacggtcatggaacgcggcttccacattgcacttc 4395059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 5609526 - 5609239
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||  ||| ||||||| ||| |||||||||||||||||  ||||||||| ||||||||    
T  5609526 ataatactagaaacaatagcatagaattctgaatcaccatgaccctgagacgatagagtttgcactagagtagatgagtcgaactcgaagacaacccgat 5609427  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
      ||||| || ||| || ||||||||||  ||||||||||||||||||||||||||| ||| ||| |||||||||  || ||||||   |||||||||||    
T  5609426 ctcatctgttcgcaacatcaaagtgaaggacctcgagtaaggctactgcctcccccttcaaaactatcatatttgtccgctgtcatagagtttgagcccg 5609327  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || | || | ||||||||| |||| ||| | |||| |  ||||||||||| ||||||||||| | |||||||||||||||||    
T  5609326 aataaattgctcgtgtgagtctctagcacagcacgcgaaagttgtaatatggttacagtcatggaacgcgacatccacattgcacttc 5609239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 298
Target Start/End: Complemental strand, 51113502 - 51113216
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| || || ||||||||||| |||  ||| ||||| ||||| |||||||||| |||||| |||||||||| |||||| |    
T  51113502 ataatactagaaacaatagcataaaactccgaatcaccatggcccagagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacccggt 51113403  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||  || ||||||||||||   | ||||||||||| ||||||||||||||||| || || |||||||||||||| ||||||||||||| |||    
T  51113402 cccatctgttcccaacaacaaagtgaatgacatcgagtaaggcaactgcctccccctccaaaacggttatatttgctcgttgccatttcgtttgagtccg 51113303  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcactt 298  Q
    ||| | || ||| ||||||||||||||||||||| | ||||||  |||||| | ||||||||| |||  ||||||||||||||||||    
T  51113302 aatgaattgcccacgggagtctctaacacaacacgcgaaagatgtaatatgttgacggtcatgaaacacggcatccacattgcactt 51113216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 24 - 287
Target Start/End: Complemental strand, 48166412 - 48166149
Alignment:
Q  24 ataatggcatagaattctgaatcaccat-gtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgattccatctattt 122  Q
    ||||| ||||||||||||| |||||||| ||||| ||||  |||||||||| | |||||||| ||| ||||||||||||| |||||||| |||| ||||     
T  48166412 ataatagcatagaattctgtatcaccatcgtccc-aagactatagagcttgcaatagagtagctgaatcagactcgaagacaacccgatcccatatattc 48166314  T
Q  123 gcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacc 222  Q
     ||| | |||||||||   | ||||||||||||| || ||||| |||||| ||||||||||||||||| || |||||| ||||||||||||||| ||  |    
T  48166313 acataagcaaagtgaatgacatcgagtaaggctattgtctcccactccaaaactgtcatatttgctcgctgccatttcatttgagcccgaataaattgac 48166214  T
Q  223 cgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatcc 287  Q
    | ||||||||||||||||||||| ||||||||  || |||||||||||||||||||| |||||||    
T  48166213 cacgggagtctctaacacaacacacaaaagatgtaagatggttacggtcatggaacgtggcatcc 48166149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 52109639 - 52109375
Alignment:
Q  13 taatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgatt 112  Q
    |||||||||||| |||  |||||||||| |||||||||||  ||| |||  |||||||||| |||||||||||||| ||| |||| |||| ||||| ||     
T  52109639 taatactagaaacaataacatagaattccgaatcaccatggtccggagacaatagagcttgtactagagtagatgaatcacactcaaagacaaccc-atc 52109541  T
Q  113 ccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccga 212  Q
    |||||| || |||||| ||||||||||  ||||||||||||||||||| ||||||||||| |   |||||||||| || || ||||||||||||||| ||    
T  52109540 ccatctgttagcatcagcaaagtgaaggacctcgagtaaggctactgcatccccctccaaaatgatcatatttgcccgctgccatttcgtttgagcctga 52109441  T
Q  213 ataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaac 278  Q
    |||| ||  || | ||||||||||||||||||  ||||||||| || ||| |||||||||||||||    
T  52109440 ataaattgtccacaggagtctctaacacaacatgcaaaagatataagatgattacggtcatggaac 52109375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 16816797 - 16817086
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcac---catgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataaccc 108  Q
    ||||||||||||| ||| || |||||||| |||||||   |||| | || ||| | |||| |||| ||||||||||| ||||| |||||||||| |||||    
T  16816797 ataatactagaaacaatagcgtagaattccgaatcacgtccatggctcggagacggtagaacttgaactagagtagacgagtcggactcgaagacaaccc 16816896  T
Q  109 gattccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagc 208  Q
    | | |||||| ||||||||| |||| ||||| |||||||||||||||||||||| ||||||||| | |||||||||||| |  || ||||| | ||||||    
T  16816897 ggtcccatctgtttgcatcagcaaaatgaagggcctcgagtaaggctactgcct-cccctccaaaattgtcatatttgcccactgccattttgattgagc 16816995  T
Q  209 ccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
     ||||||| || | |||| |||||||||| |||| || ||||||||  ||||||||||| | ||||||||| ||| ||| |||||||||||    
T  16816996 tcgaataaattgcacgcgagagtctctaaaacaatacacaaaagatgtaatatggttacagacatggaacgcggcgtccgcattgcacttc 16817086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 291
Target Start/End: Complemental strand, 36733883 - 36733604
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  ||||||||| ||||||| |||| |||| ||| |||| |||||| ||||||||    |||||||||||||||| |||||| |    
T  36733883 ataatactagaaacaataacatagaattatgaatcatcatggcccggagacgatatagcttgcactagagttatagagtcagactcgaagacaacccggt 36733784  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||| | ||  ||||| ||||||||| | | | ||||||| ||||||||||||||||||| |||| ||||||| | ||||||||||| |||||||||||    
T  36733783 cccatttgttcacatcagcaaagtgaataacattgagtaagactactgcctccccctccaaaactgccatatttacccgttgtcattttgtttgagcccg 36733684  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacat 291  Q
    ||||| ||  || || |||||||||||||||||| |||||| |  || |||||||  |||||| |||| |||||||||||    
T  36733683 aataaattgtccacgagagtctctaacacaacacacaaaaggtgtaagatggttatagtcatgaaacgcggcatccacat 36733604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 44602939 - 44602765
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||  |||| ||||||||||  |||||| |    
T  44602939 ataatactagaaacaatagcatagaattttgaatcaccatggcccggagatgatagagcttgcactagagtagcggagttagactcgaaggcaacccggt 44602840  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttg 186  Q
      ||||| ||  |||||  ||||||||   | ||||||||| ||| || |||||||||||| | |||||||||||    
T  44602839 ctcatctgttcacatcagtaaagtgaatgacatcgagtaagactaatgtctccccctccaaaattgtcatatttg 44602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 24538544 - 24538414
Alignment:
Q  165 ccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggt 264  Q
    |||||||| |||||| |||||||  | || || ||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||  ||  ||||    
T  24538544 ccctccaaaactgtcgtatttgcctgctgccaattcgtttgagcccgaataaattatccacgggagtctctaacacaacacacaaaagatctaacttggt 24538445  T
Q  265 tacggtcatggaacggggcatccacattgca 295  Q
    |||||| || ||||| |||||||||||||||    
T  24538444 tacggttatagaacgcggcatccacattgca 24538414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 2885410 - 2885306
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| || || ||||||||||  |||||||| ||||||||||| |||||||||| |||||| |||||||||| ||||||||    
T  2885410 ataatactagaaacaatagcatataactccgaatcaccatagcccgaagacgatagagcttgcactagagtagctgagtctgactcgaagacaacccgat 2885311  T
Q  112 tccat 116  Q
    |||||    
T  2885310 tccat 2885306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 24538674 - 24538586
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaa 100  Q
    ||||||||||||||||| || |||||||||||||||| ||| |||||||  |||||| |||| ||||||||||| ||||||||||||||    
T  24538674 ataatactagaaataatagcgtagaattctgaatcactatgacccgaagcagatagatcttgcactagagtagaagagtcagactcgaa 24538586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 21031336 - 21031251
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactc 97  Q
    |||||||||||||  ||  |||| ||||| ||||||||||   ||| ||| ||||||||||| |||||| ||| ||||||||||||    
T  21031336 ataatactagaaactataacataaaattccgaatcaccatagtccggagacgatagagcttgcactagaatagctgagtcagactc 21031251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 3e-79; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 13 - 298
Target Start/End: Complemental strand, 53497218 - 53496933
Alignment:
Q  13 taatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgatt 112  Q
    |||||||||||| ||| ||||||||||| ||||||||||| |||| ||| ||||||||||| || |||||||||||||| |||||||||| |||||| |     
T  53497218 taatactagaaacaatagcatagaattccgaatcaccatggcccggagacgatagagcttgcacaagagtagatgagtcggactcgaagacaacccggtc 53497119  T
Q  113 ccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccga 212  Q
    |||||| || |||||| |||||||||| ||||| ||||||||||||||||||||||| || ||||||| |||||  || |||||||| ||||||||||||    
T  53497118 ccatctgttagcatcagcaaagtgaagggcctctagtaaggctactgcctccccctcaaaaactgtcacatttgtccgctgtcattttgtttgagcccga 53497019  T
Q  213 ataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcactt 298  Q
    |||| || ||| |  |||||||||||||||||| ||||||||  ||||||||||||||||||||||| ||| ||||||||||||||    
T  53497018 ataaattgcccacaagagtctctaacacaacacgcaaaagatgtaatatggttacggtcatggaacgcggcgtccacattgcactt 53496933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 296
Target Start/End: Complemental strand, 55199698 - 55199414
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||| ||||| ||||||||||| |||| ||| ||||| ||||| || ||||||| |||||| |||| ||||| |||||| |    
T  55199698 ataatactagaaacaatagcataaaattccgaatcaccatgacccgtagacgatagcgcttgcaccagagtagctgagtcggacttgaagacaacccggt 55199599  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||| || ||||||||||||  || ||||||||||| ||||||||||||||||| ||||||||||||    | ||||||||||||||||||||    
T  55199598 cccatctgtttccaacaacaaagtgaatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttatcagctgtcatttcgtttgagcccg 55199499  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcac 296  Q
    ||| | || ||| ||||||||||||||||||||| | ||||||  |||||  | ||||||||| |||| ||||||||||||||||    
T  55199498 aatgaattgcccacgggagtctctaacacaacacgcgaaagatgtaatatattgacggtcatgaaacgtggcatccacattgcac 55199414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 42340277 - 42340519
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||| |||||| ||| ||||||||||||||||||||||| |||| ||| || |||||||| |||| ||||| |||||| |||||||||| ||| || |    
T  42340277 ataatattagaaacaatagcatagaattctgaatcaccatggcccggagacgacagagcttgcactaaagtagctgagtctgactcgaagacaactcggt 42340376  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||  ||||  |||||||||   | ||||||| ||||| |||||||||||||||||||||||||| ||| || || ||||| |||||||||||    
T  42340377 cccatctgttcacatctgcaaagtgaatgacatcgagtagggctattgcctccccctccaacactgtcatatctgcccgctgccattttgtttgagcccg 42340476  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagat 254  Q
    ||||| ||  || || |||||||||||||||||| ||||||||    
T  42340477 aataaattgtccacgagagtctctaacacaacacgcaaaagat 42340519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 299
Target Start/End: Complemental strand, 48227550 - 48227313
Alignment:
Q  63 gatagagcttggactagagtagatgagtcagactcgaagataacccgattccatctatttgcatcaacaaagtgaagagc-ctcgagtaaggctactgcc 161  Q
    ||||||||||| ||||||||||||||||| ||||| |||| ||| || ||  ||| |||  ||||| |||||||| | |  ||||||||||||||||||     
T  48227550 gatagagcttgcactagagtagatgagtcggactcaaagacaactcggttttatccattcacatcagcaaagtgatggggtctcgagtaaggctactgca 48227451  T
Q  162 tccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaatat 261  Q
    |||| |||||| || ||||| ||| | |  ||   |||||||| ||||||||||| || |||||| |||||||||||||||||| ||||||||  || ||    
T  48227450 tcccactccaatacagtcatgttttcccactgctgtttcgtttaagcccgaataaattgcccgcgagagtctctaacacaacacgcaaaagatgtaacat 48227351  T
Q  262 ggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||||||| ||| || | ||||||||||||| |||||    
T  48227350 ggttacggtaatgaaatgcggcatccacattgtacttc 48227313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 46007486 - 46007201
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||| ||||||| ||| ||||| ||||| ||||| ||||| |||| ||| |||| || ||| |||||||||| ||| || |||||||||| | ||||      
T  46007486 ataatgctagaaacaatagcataaaattccgaatcgccatggcccggagacgatatagtttgcactagagtagttgaatcggactcgaagaca-cccgc- 46007389  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||   ||| ||||||||||  || || ||||||||||||| ||||||||  || | |||| ||||||| || || |||||||||||||||||    
T  46007388 -ccatctgttcatatcgacaaagtgaatggcatcaagtaaggctactgtctccccctaaaaaattgtcgtatttgcccgctgccatttcgtttgagcccg 46007290  T
Q  212 aataatttacccgcgggagtctct-aacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||  || || |||||||| |||| ||||| ||||||||| || ||||||||  | |||||||  |||||||||||||||||||    
T  46007289 aataaattttccacgagagtctctaaacaaaacacgcaaaagatataagatggttacaataatggaacacggcatccacattgcacttc 46007201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 286
Target Start/End: Original strand, 647343 - 647485
Alignment:
Q  144 tcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaac 243  Q
    |||||||||||| |||||||||||||||  ||||||||||| || || || ||||||||||||||||| | || || ||    | |||||||||||||||    
T  647343 tcgagtaaggctgctgcctccccctccataactgtcatattagcccgctgccatttcgtttgagcccggaaaaattgcctagagaagtctctaacacaac 647442  T
Q  244 acccaaaagatagaatatggttacggtcatggaacggggcatc 286  Q
    || ||||||||  |||||||||||| |||||||||| ||||||    
T  647443 acgcaaaagatgtaatatggttacgctcatggaacgcggcatc 647485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 11020180 - 11020354
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||| ||||||||||||||||||| |||| ||| |||||| |||  ||| |||||| | ||||||||||||||| |||||  |    
T  11020180 ataatactagaaacaatagcacagaattctgaatcaccatggcccggagacgatagaccttacactggagtagttaagtcagactcgaagacaacccagt 11020279  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttg 186  Q
    ||||| | ||  ||||| |||||| || ||| |||||||| |||  || |||||||||||| | |||||||||||    
T  11020280 tccatttgttcccatcagcaaagtaaatagcatcgagtaaagctgatgtctccccctccaaaagtgtcatatttg 11020354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 647182 - 647306
Alignment:
Q  31 catagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgattccatctatttgcatcaac 130  Q
    |||||||||| ||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||||||||||| || |  ||||| ||  ||||| |    
T  647182 catagaattccgaatcaccatggcccggagacgatagagcttgcactagagtagatgagtcagactcgaagataactcggtcacatctgttcacatcagc 647281  T
Q  131 aaagtgaagagcctcgagtaaggct 155  Q
    ||||||||   | ||||||||||||    
T  647282 aaagtgaatgacatcgagtaaggct 647306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 295
Target Start/End: Complemental strand, 2615670 - 2615397
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||| ||| |||  |||||||||||||||||||||| | | |||| ||||||||| | |||||||||| |||||| || |  |||| |||   ||    
T  2615670 ataatactaaaaacaatatcatagaattctgaatcaccatggcacaaagacgatagagctcgcactagagtagttgagtcggattgaaagacaac---at 2615574  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    |       ||  ||||| |||||||||   | ||||||||||||||||||||||||||||| ||| |||||||||| || || || ||||||||||||||    
T  2615573 t-------ttcccatcagcaaagtgaacgacatcgagtaaggctactgcctccccctccaaaactatcatatttgcccgctgccaattcgtttgagcccg 2615481  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgca 295  Q
    ||| | || ||| |   || |||||||||||| | ||||| ||  |||||||||| | ||||| |||| || ||||||||||||    
T  2615480 aatgaattgcccacaaaagcctctaacacaacgcacaaaaaatgtaatatggttatgatcatgaaacgcggtatccacattgca 2615397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 27941129 - 27941261
Alignment:
Q  147 agtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacc 246  Q
    |||||||||||||||||||||||||| ||| |||||||||  || || ||||| ||||||| |||||||| ||  || || || ||||||| |||||||     
T  27941129 agtaaggctactgcctccccctccaaaactatcatatttgtccgctgccattttgtttgagtccgaataaattgtcctcgagaatctctaatacaacacg 27941228  T
Q  247 caaaagatagaatatggttacggtcatggaacg 279  Q
    ||||| ||| |||||||||||| ||||| ||||    
T  27941229 caaaaaatataatatggttacgatcatgaaacg 27941261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 27608903 - 27608999
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataaccc 108  Q
    ||||||||||||| ||| ||||| ||||| ||||||||||| |||| ||| ||||| ||||| |||||||||| |||||| |||||||||| |||||    
T  27608903 ataatactagaaacaatagcataaaattccgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagtcggactcgaagacaaccc 27608999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 24176957 - 24176861
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataaccc 108  Q
    ||||||||||| | ||| || |||||||| ||||||||||| |||  ||| ||||||||||| |||||||||| || |||||||||||||| |||||    
T  24176957 ataatactagatacaatagcttagaattccgaatcaccatgacccagagacgatagagcttgcactagagtagttgtgtcagactcgaagacaaccc 24176861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 34497372 - 34497468
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataaccc 108  Q
    |||||||||| || ||| ||||| ||||| ||||||||||| |||| ||| ||||| ||||| |||||||||| |||||| |||||||||| |||||    
T  34497372 ataatactaggaacaatagcataaaattccgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagtcggactcgaagacaaccc 34497468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 31341725 - 31341826
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaag----atgatagagcttggactagagtagatgagtcagactcgaagataacc 107  Q
    |||||| |||||| ||| | ||| ||||||||||||||||| |||| ||    | ||||||||||| ||||||||||  |||||||| ||||||||||||    
T  31341725 ataatattagaaacaatagtataaaattctgaatcaccatgacccggagacgtaggatagagcttgcactagagtagtggagtcagattcgaagataacc 31341824  T
Q  108 cg 109  Q
    ||    
T  31341825 cg 31341826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 9e-73; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 13 - 299
Target Start/End: Complemental strand, 23854118 - 23853832
Alignment:
Q  13 taatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgatt 112  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||| ||| ||||||||||| |||||||| |||||||| |||||||||| ||| |  |     
T  23854118 taatactagaaacaatagcatagaattctgaatcaccatggcccggagacgatagagcttgcactagagttgatgagtcggactcgaagacaactcagtc 23854019  T
Q  113 ccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccga 212  Q
     ||||| || ||||||||||||||||  ||||| ||||||||||||||||| |||||||| ||||||||||||   || ||||||||||||||| |||||    
T  23854018 tcatctgttagcatcaacaaagtgaatggcctcaagtaaggctactgcctcaccctccaaaactgtcatatttttccgctgtcatttcgtttgaacccga 23853919  T
Q  213 ataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    |||| || ||| ||||||||||||||| ||||| ||||||||  ||||| ||||||||||||||||| ||| ||||||| |||||||    
T  23853918 ataaattgcccacgggagtctctaacataacacgcaaaagatgtaatatagttacggtcatggaacgcggcgtccacatcgcacttc 23853832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 13415210 - 13414923
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||| ||| ||| ||||| ||||| ||||||||||| ||||  || |||| | |||| ||||||||||| || || ||||| |||| ||| ||||    
T  13415210 ataatactaaaaacaatagcataaaattcagaatcaccatggcccggggacgatataccttgcactagagtagaagaatcggactcaaagacaactcgat 13415111  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||||||||  ||||  |||| |||||||||||||||||||||||||||||||| |||||||||||||  || || |||||||||||||||||    
T  13415110 cccatctgtttgcatccgcaaaaggaagggcctcgagtaaggctactgcctccccctccaaaactgtcatatttgtccgctgccatttcgtttgagcccg 13415011  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || ||||||  ||||||||| | ||||| |||||| |  |||||||||||| |||||||||  | |||||||||||||||||    
T  13415010 aataaattgcccgcgaaagtctctaaaaaaacacacaaaagttgtaatatggttacgttcatggaacacgacatccacattgcacttc 13414923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 8451123 - 8451410
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||| | |||  |||| ||||| ||||||||||| || | ||| |||| |||||| |||| ||||||||||||||||||||||| |||||| |    
T  8451123 ataatactagacacaataacataaaattccgaatcaccatgacctggagacgataaagcttgcactaaagtagatgagtcagactcgaagacaacccggt 8451222  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||  ||  ||||| | |||||||  |  |||||||| ||||||||||||||||||||||||||||||||||| || |  | ||| |||||||||||    
T  8451223 cccatccgttcacatcagcgaagtgaatggaatcgagtaaagctactgcctccccctccaacactgtcatatttgcccgcttcctttttgtttgagcccg 8451322  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||  || |  ||||||||||||||||| |||||||||  || |||||||||||||||||||| |||||||||||| ||||||    
T  8451323 aataaattgtccacaagagtctctaacacaacatccaaaagatgtaaaatggttacggtcatggaacgcggcatccacattacacttc 8451410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 478056 - 478343
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||| |||||| |||  |||| ||| | ||||||||||  |||| ||| ||||||||||| ||||||||||  |||||||| |||||||||||||| |    
T  478056 ataatattagaaacaatatcataaaataccgaatcaccataacccggagacgatagagcttgcactagagtagtagagtcagattcgaagataacccggt 478155  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||||||  ||| | |||||||||  || ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||    
T  478156 cccatctattcacattagcaaagtgaatggcatcgagtaaggctactgcctccccctccaaaactgtcatatttgcccgttgccattttgtttgagcccg 478255  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
     |||| ||  ||  || | ||||||||||||||| ||||||||   | ||||||  ||||||||||||  ||||||||||| ||||||    
T  478256 gataaattgaccatggaaatctctaacacaacacacaaaagatgttagatggttgtggtcatggaacgttgcatccacattacacttc 478343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 185591 - 185820
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||||||||||||||||||||  ||| ||| || |||||||| |||| |||||  |||||||||||| ||| |||||| |    
T  185591 ataatactagaaacaatagcatagaattctgaatcaccatggtccggagacgaaagagcttgcactaaagtagcagagtcagactcgtagacaacccggt 185690  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||||||  ||||||||||||||| ||  ||||||||||||||| ||| ||||||||| |||||||||||||| ||||  ||||||||||||||||     
T  185691 tccatctattcacatcaacaaagtgaatagtatcgagtaaggctacttcct-cccctccaaaactgtcatatttgcccgtttccatttcgtttgagccca 185789  T
Q  212 aataatttacccgcgggagtctctaacacaac 243  Q
     |||| || ||| | ||||||||| |||||||    
T  185790 gataaatttccctc-ggagtctcttacacaac 185820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 7127410 - 7127123
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    |||||||| |||| |||  |||||||| || |||||||||| |||| ||| || |||||||| |||| |||||   ||||||||||||||  |||||| |    
T  7127410 ataatacttgaaacaataacatagaatactaaatcaccatggcccggagacgaaagagcttgcactaaagtagcatagtcagactcgaaggcaacccggt 7127311  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||| ||  ||||| ||||||||| ||| ||||||||||||||| ||||||||||||| ||| |||||||||| ||||  |||||| |||| || ||    
T  7127310 cccatctgttcacatcagcaaagtgaatagcatcgagtaaggctactacctccccctccaaaactttcatatttgcccgtttccatttcatttgtgcacg 7127211  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || ||| || |||||||||||||||||  || | |||  || | ||||||| |||||||||| |||||||||||| ||||||    
T  7127210 aataaatttcccccgagagtctctaacacaacatgcagaggatgtaagacggttacgttcatggaacgcggcatccacattccacttc 7127123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 40588730 - 40588934
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||| ||| ||| ||||||||||| |||||| |||| ||||  || ||||||| ||  |||||||||||||| |||||||| |||| |||||| |    
T  40588730 ataatactataaacaatagcatagaattcagaatcatcatggcccggggacgatagagtttacactagagtagatgaatcagactcaaagacaacccggt 40588829  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
      ||||| ||||||||  ||||  |||| |||||||||| ||||||||||||||||||||| ||||| |||||||| || || |||||||||||||||||    
T  40588830 ctcatctgtttgcatccgcaaaacgaagggcctcgagtacggctactgcctccccctccaaaactgttatatttgcccgctgccatttcgtttgagcccg 40588929  T
Q  212 aataa 216  Q
    |||||    
T  40588930 aataa 40588934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 37712260 - 37712027
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||||  |||||||||  ||||||||||  | |||| ||| |||||||||| |||    
T  37712260 ataatactagaaacaatagcatagtattctgaatcaccatgt-ccgaagacaatagagcttacactagagtagcagggtcaaactagaagataacctgat 37712162  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
      ||||| ||  |||||||||||||||  ||    | ||| |||||| ||| ||||| ||| |||||||||||| | || ||||||||||||| ||| |     
T  37712161 ctcatctgttcacatcaacaaagtgaatggc----attaaagctactacct-ccccttcaaaactgtcatattttcccgctgtcatttcgttttagctca 37712067  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaa 251  Q
    ||||| || ||| |  |||| ||||||||||||| |||||    
T  37712066 aataaattgcccacacgagtttctaacacaacacgcaaaa 37712027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 33642764 - 33642869
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  ||| |||||||||||||||||| |||| ||| || |||||||| | ||||||||||||||  |||| ||||| |||| |||    
T  33642764 ataatactagaaacaatatcattgaattctgaatcaccatggcccggagacgacagagcttgcattagagtagatgagttggacttgaagacaacctgat 33642863  T
Q  112 tccatc 117  Q
    ||||||    
T  33642864 tccatc 33642869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 598237 - 598334
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccg 109  Q
    ||||||||||||| ||| |||||||| |  ||||||||||| || ||||| ||||||||||| |||||||||| | |||| |||| ||||| ||||||    
T  598237 ataatactagaaacaatagcatagaacttcgaatcaccatgacctgaagacgatagagcttgcactagagtagctaagtccgacttgaagacaacccg 598334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 11870451 - 11870364
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcga 99  Q
    ||||||||||||| ||| |||||||| || ||||||||||| | |  |||  |||||||||| || ||||||| ||||||||||||||    
T  11870451 ataatactagaaacaatagcatagaaatccgaatcaccatggctccgagacaatagagcttgcacaagagtagctgagtcagactcga 11870364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 9496857 - 9496797
Alignment:
Q  124 catcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatt 184  Q
    |||||||||||||||   | || ||||||||||||||||| |||||||| |||||||||||    
T  9496857 catcaacaaagtgaatgtcatcaagtaaggctactgcctcaccctccaaaactgtcatatt 9496797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 40588961 - 40589002
Alignment:
Q  258 atatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||||||||| |||||||||| ||||||||| |||||||||    
T  40588961 atatggttacgttcatggaacgcggcatccacgttgcacttc 40589002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 5e-62; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 14680349 - 14680059
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||| |||||| ||||||||||   |||| ||||||||||||||| | ||||||||| ||||| || || |||| ||| || |    
T  14680349 ataatactagaaacaatagcagagaattttgaatcaccactgcccggagatgatagagcttgcaatagagtagacgagtcggaatcaaagacaactcggt 14680250  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
    ||||||| ||||||||| || ||||||| |||||||||||||||||||||||||||||||| |||||||||||| | || || |||||| ||||||||      
T  14680249 tccatctgtttgcatcagcagagtgaagggcctcgagtaaggctactgcctccccctccaatactgtcatattttcccgctgccatttcatttgagccat 14680150  T
Q  212 aataatttac---ccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || |   |||||||||||||||||||||||  ||||||||  ||| ||||| ||||||||||||| || ||||||||||||||||    
T  14680149 aataaattgcccgccgcgggagtctctaacacaacatgcaaaagatgtaatgtggttgcggtcatggaacgcggtatccacattgcacttc 14680059  T

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Target: chr6; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 15605994 - 15606281
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| ||||||  ||||||||||||||| ||   ||| ||||||||||| |||||||||| |||||| |||| ||||| |||||| |    
T  15605994 ataatactagaaacaatagcatagtgttctgaatcaccatgacctagagacgatagagcttgcactagagtagctgagtcggacttgaagacaacccggt 15606093  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||| | ||  |||||||||||||||  || ||||||||||||||||||||||||||||| |||||||| ||| | || || ||||| |||||||||||    
T  15606094 cccatttgttcccatcaacaaagtgaatggcatcgagtaaggctactgcctccccctccaaaactgtcatgttttcccgctgccattttgtttgagcccg 15606193  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| || |||  ||||||||||||||||||||  |||||||  |||||||||||| || || || | |||||||||||||||||||    
T  15606194 aataagttgcccatgggagtctctaacacaacacgaaaaagatgtaatatggttacgatcgtgaaatgcggcatccacattgcacttc 15606281  T

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Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 28107326 - 28107039
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  |||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||  |||| ||||||||||| |||  |||    
T  28107326 ataatactagaaacaataacatagaattctgaatcaccatggcccggagacgatagagcttgcactagagtagcggagttagactcgaagacaacgtgat 28107227  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||||||||   ||   |||||||||  || || |||||||||||||||||||||||||| |||||||||| ||  || || ||||||||||||||| |    
T  28107226 cccatctattcatatttgcaaagtgaatggcatcaagtaaggctactgcctccccctccaaaactgtcatatctgtccgctgccatttcgtttgagcctg 28107127  T
Q  212 aataatttacccgcgggagtctctaacacaacacccaaaagatagaatatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    ||||| ||  || ||||||||||||||||||||| | ||||||  || ||||||||| |||||||||| ||| ||| | |||||||||    
T  28107126 aataaattgtccacgggagtctctaacacaacacacgaaagatgtaagatggttacgatcatggaacgtggcttcctcgttgcacttc 28107039  T

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Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 254
Target Start/End: Original strand, 29368057 - 29368296
Alignment:
Q  13 taatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgatt 112  Q
    |||||||||||  ||| ||||||||||  ||||||| ||| |||| ||| ||||||||||| |||| |||||||||||| |||||||| | |    | |     
T  29368057 taatactagaagcaatagcatagaattacgaatcactatgacccggagacgatagagcttgcactatagtagatgagtcggactcgaaaacagttaggtc 29368156  T
Q  113 ccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccga 212  Q
    ||||||||| |||||| |||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||   || || |||||| ||||||  |||    
T  29368157 ccatctattagcatcagcaaagtgaagggcctcgagtaaggatattgcctccccctccaaaactgtcatatttatccgctgccatttcttttgag--cga 29368254  T
Q  213 ataatttacccgcgggagtctctaacacaacacccaaaagat 254  Q
    |||| ||  || || ||||||| |||||||||| ||||||||    
T  29368255 ataaattgtccacgagagtctcaaacacaacacgcaaaagat 29368296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 30 - 267
Target Start/End: Original strand, 15053193 - 15053430
Alignment:
Q  30 gcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgattccatctatttgcatcaa 129  Q
    ||||||||||| ||||||||||| |||||||| ||||| | ||| |||||||||| |||||| |||||||||| ||||   |  ||| | ||  | |||     
T  15053193 gcatagaattccgaatcaccatggcccgaagacgatagcgtttgcactagagtagctgagtcggactcgaagacaaccttgtctcattttttcacgtcag 15053292  T
Q  130 caaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcggga 229  Q
    ||| | |||  || ||||||||||||||||||||||||||||||||| |||||||| | || |||||| | |||||||||||||||| ||  || | | |    
T  15053293 caaggcgaatggcatcgagtaaggctactgcctccccctccaacactatcatatttacccgctgtcatcttgtttgagcccgaataaattgtccactgaa 15053392  T
Q  230 gtctctaacacaacacccaaaagatagaatatggttac 267  Q
    |||||||||||||||| ||||||||  || ||||||||    
T  15053393 gtctctaacacaacacgcaaaagatgtaagatggttac 15053430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 206
Target Start/End: Original strand, 19690879 - 19691073
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||| ||||||||||  |||||||||| | |  ||| ||||||||||| |||| ||||| ||||||||||||||||| ||| || |    
T  19690879 ataatactagaaacaatgacatagaattccaaatcaccatgactcagagacgatagagcttgcactaaagtagctgagtcagactcgaagacaactcggt 19690978  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttga 206  Q
      ||||| ||  ||||| |||||||||   | |||| |||||||| ||||||||| ||||| || ||||||||||  ||||||||||||||||||    
T  19690979 cacatctgttcacatcagcaaagtgaatgacatcgaataaggctattgcctccccttccaaaacggtcatatttgtccgttgtcatttcgtttga 19691073  T

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Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 30801991 - 30802195
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| |||  ||||||||||  | |||||||| | || | | ||||||||||| |||| ||||| ||| || |||||||||| ||||   |    
T  30801991 ataatactagaaacaataacatagaattccaagtcaccatggctcggaaacgatagagcttgcactaaagtagctgaatcggactcgaagacaacctagt 30802090  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccg 211  Q
     |||| | ||  ||||  |||||| ||  || || ||||||||||||||||||||| |||| |||||||||||||| || || ||||| |||| ||||||    
T  30802091 cccattttttcacatctgcaaagtaaatggcatctagtaaggctactgcctcccccaccaaaactgtcatatttgcccgctgccattttgtttaagcccg 30802190  T
Q  212 aataa 216  Q
    |||||    
T  30802191 aataa 30802195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 11731673 - 11731870
Alignment:
Q  16 tactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgattcca 115  Q
    ||||||||| | | |||||||| || ||| ||||||| |||| |||  |||||||||| |||| | |  | ||||| |||||||||| |||| | | | |    
T  11731673 tactagaaacagtagcatagaactccgaaccaccatggcccggagacaatagagcttgcactatattgaaagagtcggactcgaagacaacctgttccta 11731772  T
Q  116 tctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaata 215  Q
    | | ||  ||||| |||||||||||| ||||||  ||||| |||||||||| ||||| |||||||||||||| || || ||||| ||||||||||| |||    
T  11731773 tatgttctcatcagcaaagtgaagagtctcgag--aggctgctgcctcccc-tccaaaactgtcatatttgcccgctgccattttgtttgagcccggata 11731869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 34104465 - 34104542
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgag 89  Q
    ||||||||| ||| ||| ||||| |||||||||||||||||  ||| ||| ||||| ||||| |||||||||| ||||    
T  34104465 ataatactaaaaacaatagcataaaattctgaatcaccatggtccggagacgatagcgcttgcactagagtagctgag 34104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 21944628 - 21944669
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgt 53  Q
    ||||||||||||| ||| |||||||||||||||| |||||||    
T  21944628 ataatactagaaacaatagcatagaattctgaattaccatgt 21944669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 27443117 - 27443029
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaag 101  Q
    ||||||||||||| ||| ||||| ||||||||||||||||| ||   ||| ||||| || || |||||||||| ||||||  ||||||||    
T  27443117 ataatactagaaacaatagcataaaattctgaatcaccatggcctagagacgatagcgc-tgcactagagtagctgagtccaactcgaag 27443029  T

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Target: scaffold0446 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 59 - 299
Target Start/End: Complemental strand, 326 - 86
Alignment:
Q  59 agatgatagagcttggactagagtagatgagtcagactcgaagataacccgattccatctatttgcatcaacaaagtgaagagcctcgagtaaggctact 158  Q
    ||||||||| ||||| |||||||||| |||||| |||||||||| |||||| | |||| ||||  || || |||||||||  || ||||||||||| |||    
T  326 agatgatagcgcttgcactagagtagctgagtcggactcgaagacaacccggtcccatatattcccaacagcaaagtgaatggcatcgagtaaggcaact 227  T
Q  159 gcctccccctccaacactgtcatatttgctcgttgtcatttcgtttgagcccgaataatttacccgcgggagtctctaacacaacacccaaaagatagaa 258  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||| ||||||| | |||||| | |    
T  226 gcctccccctcccaaactgtcatatttgctcgttgtcatttcgtttgagcccgaatgaattgcccacgggagtctctaaaacaacacgcgaaagatngta 127  T
Q  259 tatggttacggtcatggaacggggcatccacattgcacttc 299  Q
    |||| | ||||||||| |||  | |||||||||||||||||    
T  126 tatgttgacggtcatgaaacacgacatccacattgcacttc 86  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 264 - 434
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 111  Q
    ||||||||||||| ||| |||||||||||||||| |||||| || | ||||||||||||||| ||||||||||||||||| |||||||| ||||   |||    
T  264 ataatactagaaacaatagcatagaattctgaattaccatgacctggagatgatagagcttgcactagagtagatgagtcggactcgaaaataattggat 363  T
Q  112 tccatctatttgcatcaacaaagtgaagagcctcgagtaaggctactgcctccccctccaacactgtcatat 183  Q
     |||| | ||||||||| |||| | ||| ||||| |  ||||||||| ||| ||||||||| ||||||||||    
T  364 cccatttgtttgcatcagcaaaataaagggcctccaacaaggctactacct-cccctccaaaactgtcatat 434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 44244 - 44332
Alignment:
Q  12 ataatactagaaataatggcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaag 101  Q
    ||||||||||||| ||| ||||| ||||||||||||||||| ||   ||| ||||| || || |||||||||| ||||||  ||||||||    
T  44244 ataatactagaaacaatagcataaaattctgaatcaccatggcctagagacgatagcgc-tgcactagagtagctgagtccaactcgaag 44332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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