View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13318_low_7 (Length: 256)

Name: NF13318_low_7
Description: NF13318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13318_low_7
NF13318_low_7
[»] chr2 (50 HSPs)
chr2 (51-228)||(43585937-43586114)
chr2 (76-170)||(24067758-24067852)
chr2 (86-151)||(12224250-12224315)
chr2 (86-158)||(2438686-2438758)
chr2 (86-158)||(5040754-5040826)
chr2 (125-171)||(13501084-13501130)
chr2 (86-164)||(18570986-18571064)
chr2 (121-185)||(14373429-14373493)
chr2 (121-169)||(14450797-14450845)
chr2 (90-209)||(15972842-15972961)
chr2 (88-158)||(37558997-37559067)
chr2 (127-168)||(24067263-24067304)
chr2 (114-171)||(33884058-33884115)
chr2 (114-171)||(37211880-37211937)
chr2 (85-165)||(20242693-20242773)
chr2 (114-165)||(8300214-8300265)
chr2 (120-171)||(18512143-18512194)
chr2 (60-130)||(14450708-14450778)
chr2 (60-130)||(17895824-17895894)
chr2 (90-164)||(18840984-18841058)
chr2 (98-164)||(30404829-30404895)
chr2 (86-164)||(38117126-38117204)
chr2 (110-164)||(45000837-45000891)
chr2 (113-158)||(19536391-19536436)
chr2 (85-130)||(24009343-24009388)
chr2 (114-171)||(37491850-37491907)
chr2 (121-186)||(44605141-44605206)
chr2 (116-160)||(31026713-31026757)
chr2 (86-130)||(37419802-37419846)
chr2 (125-164)||(10535765-10535804)
chr2 (121-164)||(22131256-22131299)
chr2 (133-172)||(26787812-26787851)
chr2 (121-168)||(44984652-44984699)
chr2 (114-164)||(896225-896275)
chr2 (86-164)||(5367206-5367284)
chr2 (120-166)||(11223864-11223910)
chr2 (129-171)||(11439802-11439844)
chr2 (113-151)||(21624294-21624332)
chr2 (98-152)||(28596495-28596549)
chr2 (114-164)||(34006986-34007036)
chr2 (86-152)||(34993949-34994015)
chr2 (86-164)||(37411211-37411289)
chr2 (121-171)||(42665615-42665665)
chr2 (119-164)||(6180865-6180910)
chr2 (119-164)||(12668423-12668468)
chr2 (113-158)||(18255974-18256019)
chr2 (85-130)||(36096330-36096375)
chr2 (72-108)||(8300188-8300224)
chr2 (114-209)||(30298444-30298537)
chr2 (136-164)||(40681996-40682024)
[»] chr7 (48 HSPs)
chr7 (64-195)||(5937366-5937497)
chr7 (64-159)||(25956464-25956558)
chr7 (119-209)||(1885542-1885632)
chr7 (60-209)||(22801671-22801831)
chr7 (62-171)||(48963995-48964114)
chr7 (114-171)||(2144533-2144591)
chr7 (86-164)||(21880166-21880244)
chr7 (99-164)||(25481916-25481981)
chr7 (85-170)||(39138452-39138537)
chr7 (132-168)||(2143866-2143902)
chr7 (115-171)||(13094709-13094765)
chr7 (86-160)||(598226-598300)
chr7 (86-164)||(8234160-8234238)
chr7 (119-209)||(27945010-27945100)
chr7 (114-164)||(28155584-28155634)
chr7 (120-158)||(36013799-36013837)
chr7 (89-158)||(15680829-15680898)
chr7 (89-150)||(21864836-21864897)
chr7 (123-164)||(38134410-38134451)
chr7 (127-164)||(44172898-44172935)
chr7 (126-171)||(44317293-44317338)
chr7 (93-149)||(7197271-7197327)
chr7 (120-164)||(7438720-7438764)
chr7 (119-171)||(9050133-9050185)
chr7 (112-164)||(12843027-12843079)
chr7 (127-171)||(35238192-35238236)
chr7 (109-164)||(4909165-4909220)
chr7 (86-164)||(5409798-5409881)
chr7 (120-171)||(36196787-36196838)
chr7 (121-164)||(37775996-37776039)
chr7 (120-171)||(37820087-37820138)
chr7 (118-164)||(2525843-2525889)
chr7 (134-172)||(6091333-6091371)
chr7 (114-164)||(10893342-10893392)
chr7 (114-160)||(10893864-10893910)
chr7 (120-158)||(17257990-17258028)
chr7 (142-172)||(31377006-31377036)
chr7 (121-186)||(9037719-9037784)
chr7 (126-171)||(10702551-10702595)
chr7 (133-166)||(18678160-18678193)
chr7 (119-164)||(24339656-24339701)
chr7 (112-209)||(26733273-26733370)
chr7 (119-164)||(31808509-31808554)
chr7 (120-165)||(48438559-48438604)
chr7 (88-164)||(5835261-5835337)
chr7 (85-165)||(18212999-18213079)
chr7 (86-130)||(24339701-24339745)
chr7 (132-164)||(35917393-35917425)
[»] chr4 (55 HSPs)
chr4 (62-171)||(13307884-13307993)
chr4 (72-171)||(44362673-44362772)
chr4 (60-165)||(37496717-37496833)
chr4 (114-172)||(13117435-13117493)
chr4 (86-164)||(23292953-23293031)
chr4 (91-158)||(12797310-12797377)
chr4 (114-171)||(13484030-13484088)
chr4 (85-158)||(49431046-49431119)
chr4 (121-203)||(11797630-11797715)
chr4 (89-164)||(29205458-29205533)
chr4 (86-164)||(8423685-8423763)
chr4 (60-171)||(10634997-10635120)
chr4 (98-164)||(21945517-21945583)
chr4 (86-164)||(28964215-28964293)
chr4 (98-151)||(16073421-16073474)
chr4 (119-179)||(22799893-22799951)
chr4 (60-160)||(5998835-5998934)
chr4 (119-203)||(16303266-16303350)
chr4 (104-164)||(54580008-54580068)
chr4 (126-169)||(10164861-10164904)
chr4 (86-141)||(34306771-34306826)
chr4 (62-109)||(39619045-39619092)
chr4 (114-164)||(683066-683115)
chr4 (137-171)||(28663499-28663533)
chr4 (89-162)||(40224468-40224541)
chr4 (113-158)||(42640549-42640594)
chr4 (120-164)||(24613702-24613746)
chr4 (86-158)||(715572-715646)
chr4 (86-158)||(752898-752972)
chr4 (121-164)||(18513243-18513286)
chr4 (109-192)||(21345523-21345606)
chr4 (119-158)||(30298967-30299006)
chr4 (119-158)||(30327835-30327874)
chr4 (98-164)||(34589682-34589751)
chr4 (98-157)||(56049897-56049956)
chr4 (98-164)||(2361954-2362020)
chr4 (134-164)||(5654606-5654636)
chr4 (95-168)||(9298943-9299017)
chr4 (126-164)||(9988706-9988744)
chr4 (134-164)||(10546162-10546192)
chr4 (119-169)||(27624092-27624142)
chr4 (114-164)||(33950150-33950200)
chr4 (85-130)||(5414127-5414172)
chr4 (113-158)||(6879459-6879504)
chr4 (119-164)||(12895116-12895161)
chr4 (102-171)||(35062452-35062520)
chr4 (121-158)||(47492399-47492436)
chr4 (120-164)||(847965-848009)
chr4 (98-158)||(4157169-4157229)
chr4 (98-158)||(4157456-4157516)
chr4 (132-164)||(8457939-8457971)
chr4 (60-108)||(13484078-13484126)
chr4 (124-164)||(14465299-14465339)
chr4 (136-164)||(26276026-26276054)
chr4 (86-130)||(30982834-30982878)
[»] chr6 (56 HSPs)
chr6 (65-209)||(1334630-1334774)
chr6 (63-209)||(26402624-26402772)
chr6 (115-171)||(6751878-6751934)
chr6 (60-190)||(19369805-19369923)
chr6 (60-171)||(32225331-32225442)
chr6 (86-164)||(28715309-28715387)
chr6 (73-171)||(29959182-29959281)
chr6 (90-164)||(34595148-34595222)
chr6 (127-171)||(10031577-10031621)
chr6 (86-158)||(28152118-28152190)
chr6 (60-134)||(26178527-26178601)
chr6 (119-171)||(22745964-22746016)
chr6 (125-200)||(5579632-5579707)
chr6 (60-130)||(785385-785455)
chr6 (112-170)||(7377987-7378045)
chr6 (119-156)||(785455-785492)
chr6 (123-164)||(10157998-10158039)
chr6 (119-191)||(9024176-9024248)
chr6 (115-171)||(16516948-16517004)
chr6 (113-164)||(426508-426559)
chr6 (89-164)||(13364675-13364750)
chr6 (89-152)||(32978869-32978932)
chr6 (98-164)||(7265572-7265638)
chr6 (114-164)||(7977825-7977875)
chr6 (86-164)||(17841556-17841634)
chr6 (98-164)||(33001268-33001334)
chr6 (132-181)||(31430277-31430326)
chr6 (120-164)||(4859114-4859158)
chr6 (66-164)||(7942269-7942373)
chr6 (115-171)||(16503682-16503738)
chr6 (121-164)||(10335378-10335421)
chr6 (86-164)||(853826-853904)
chr6 (86-152)||(4877969-4878034)
chr6 (118-164)||(9629397-9629443)
chr6 (86-124)||(17327617-17327655)
chr6 (125-186)||(31327806-31327868)
chr6 (114-160)||(34057972-34058018)
chr6 (119-177)||(34197112-34197170)
chr6 (134-171)||(5635903-5635940)
chr6 (112-157)||(6898274-6898319)
chr6 (119-164)||(9617448-9617493)
chr6 (119-164)||(10770674-10770719)
chr6 (113-150)||(16388211-16388248)
chr6 (85-130)||(16488545-16488590)
chr6 (119-164)||(16766711-16766756)
chr6 (89-146)||(23771610-23771667)
chr6 (86-130)||(8365475-8365519)
chr6 (112-164)||(8776966-8777018)
chr6 (86-130)||(10339081-10339125)
chr6 (132-172)||(14514794-14514834)
chr6 (120-164)||(15489733-15489777)
chr6 (86-130)||(16766756-16766800)
chr6 (112-164)||(19040366-19040418)
chr6 (98-158)||(24645501-24645561)
chr6 (104-148)||(30851630-30851674)
chr6 (119-171)||(34868157-34868209)
[»] chr8 (51 HSPs)
chr8 (85-200)||(26915201-26915321)
chr8 (80-203)||(42874497-42874620)
chr8 (63-171)||(34073922-34074030)
chr8 (60-195)||(10497746-10497892)
chr8 (120-171)||(27733854-27733905)
chr8 (125-168)||(31119097-31119140)
chr8 (86-164)||(40332205-40332283)
chr8 (104-164)||(20873083-20873143)
chr8 (120-171)||(24295138-24295189)
chr8 (128-209)||(22600497-22600579)
chr8 (136-181)||(1639487-1639532)
chr8 (112-164)||(4948666-4948718)
chr8 (86-134)||(5813636-5813684)
chr8 (104-164)||(26434194-26434254)
chr8 (120-164)||(31548294-31548338)
chr8 (89-164)||(3025565-3025640)
chr8 (115-170)||(3954376-3954431)
chr8 (115-170)||(18170478-18170533)
chr8 (115-170)||(18634046-18634101)
chr8 (85-164)||(20679361-20679440)
chr8 (114-164)||(1433359-1433409)
chr8 (114-164)||(12985406-12985456)
chr8 (86-192)||(14134685-14134791)
chr8 (86-164)||(36450721-36450799)
chr8 (111-164)||(31236569-31236622)
chr8 (85-130)||(34450987-34451032)
chr8 (89-158)||(44462165-44462234)
chr8 (89-158)||(44469698-44469767)
chr8 (119-191)||(5307048-5307119)
chr8 (135-171)||(6960692-6960728)
chr8 (120-164)||(29447111-29447155)
chr8 (119-158)||(10002163-10002202)
chr8 (124-171)||(11246084-11246131)
chr8 (104-167)||(24413544-24413607)
chr8 (125-228)||(44067466-44067569)
chr8 (91-209)||(926760-926878)
chr8 (125-171)||(2652346-2652391)
chr8 (134-164)||(29198494-29198524)
chr8 (137-166)||(1591311-1591340)
chr8 (137-186)||(14227214-14227263)
chr8 (74-165)||(20658475-20658562)
chr8 (119-164)||(22651990-22652035)
chr8 (113-158)||(24613540-24613585)
chr8 (119-164)||(24669447-24669492)
chr8 (119-164)||(25566855-25566900)
chr8 (119-160)||(31681830-31681871)
chr8 (120-164)||(4298887-4298931)
chr8 (136-164)||(10441217-10441245)
chr8 (134-193)||(16230105-16230165)
chr8 (120-164)||(31586278-31586322)
chr8 (136-164)||(34201063-34201091)
[»] chr3 (45 HSPs)
chr3 (60-157)||(34834869-34834965)
chr3 (90-171)||(14338454-14338535)
chr3 (86-164)||(10954966-10955044)
chr3 (86-164)||(20503479-20503557)
chr3 (76-172)||(6984770-6984865)
chr3 (119-171)||(49179715-49179767)
chr3 (88-166)||(35222950-35223028)
chr3 (86-164)||(55401089-55401167)
chr3 (86-164)||(28918015-28918095)
chr3 (107-164)||(23271982-23272039)
chr3 (119-164)||(44427855-44427900)
chr3 (86-158)||(40993302-40993374)
chr3 (86-228)||(24205008-24205150)
chr3 (114-164)||(20691333-20691383)
chr3 (114-164)||(27858354-27858404)
chr3 (85-170)||(13845491-13845576)
chr3 (115-164)||(40150567-40150616)
chr3 (86-150)||(7171529-7171593)
chr3 (119-171)||(15864252-15864304)
chr3 (136-192)||(41319327-41319383)
chr3 (113-164)||(8383271-8383322)
chr3 (113-152)||(25775535-25775574)
chr3 (120-171)||(42076751-42076801)
chr3 (132-171)||(52558141-52558180)
chr3 (114-160)||(1502592-1502638)
chr3 (126-164)||(9210832-9210870)
chr3 (114-164)||(21149081-21149131)
chr3 (132-186)||(34409355-34409409)
chr3 (114-164)||(51206348-51206398)
chr3 (119-164)||(4990967-4991012)
chr3 (115-164)||(8587017-8587066)
chr3 (86-164)||(8789515-8789595)
chr3 (113-158)||(16000010-16000055)
chr3 (138-211)||(25652050-25652123)
chr3 (119-164)||(49651786-49651831)
chr3 (104-152)||(3865700-3865748)
chr3 (114-166)||(4946199-4946251)
chr3 (86-130)||(4987247-4987291)
chr3 (115-167)||(8593148-8593200)
chr3 (86-130)||(14832158-14832202)
chr3 (121-209)||(18268007-18268095)
chr3 (136-164)||(40017386-40017414)
chr3 (118-162)||(40697857-40697901)
chr3 (86-130)||(41961606-41961650)
chr3 (60-132)||(54690304-54690376)
[»] scaffold0314 (1 HSPs)
scaffold0314 (63-171)||(8955-9061)
[»] chr5 (46 HSPs)
chr5 (121-209)||(30080503-30080591)
chr5 (114-209)||(19167571-19167667)
chr5 (115-189)||(10010543-10010617)
chr5 (86-164)||(21576712-21576790)
chr5 (60-195)||(7621171-7621311)
chr5 (86-164)||(21191023-21191101)
chr5 (86-164)||(27932249-27932327)
chr5 (114-169)||(16207586-16207641)
chr5 (120-171)||(21319946-21319997)
chr5 (82-152)||(11084325-11084395)
chr5 (119-192)||(32444752-32444825)
chr5 (116-164)||(8420041-8420089)
chr5 (132-172)||(42192282-42192322)
chr5 (114-161)||(2548404-2548451)
chr5 (113-164)||(6247636-6247687)
chr5 (86-164)||(31084337-31084420)
chr5 (120-162)||(10009842-10009884)
chr5 (112-158)||(15884008-15884054)
chr5 (125-171)||(26205766-26205812)
chr5 (86-164)||(30502355-30502433)
chr5 (86-164)||(30542698-30542776)
chr5 (86-164)||(42893374-42893452)
chr5 (115-164)||(24906297-24906346)
chr5 (126-171)||(38784813-38784858)
chr5 (118-166)||(15294943-15294991)
chr5 (112-164)||(28588667-28588719)
chr5 (86-158)||(43564901-43564973)
chr5 (60-95)||(9031879-9031914)
chr5 (110-164)||(11596448-11596500)
chr5 (87-130)||(21542089-21542132)
chr5 (125-164)||(31264452-31264491)
chr5 (114-164)||(4445154-4445204)
chr5 (114-164)||(6326292-6326342)
chr5 (98-164)||(26312783-26312849)
chr5 (85-151)||(30099004-30099070)
chr5 (134-164)||(43208289-43208319)
chr5 (121-171)||(9031925-9031977)
chr5 (85-130)||(21814320-21814365)
chr5 (91-164)||(23012380-23012453)
chr5 (119-164)||(28296342-28296387)
chr5 (99-164)||(32630715-32630780)
chr5 (119-164)||(41558654-41558699)
chr5 (86-130)||(21522809-21522853)
chr5 (86-130)||(21533375-21533419)
chr5 (114-158)||(33178045-33178089)
chr5 (112-160)||(42029770-42029818)
[»] scaffold0504 (1 HSPs)
scaffold0504 (60-171)||(8643-8749)
[»] chr1 (55 HSPs)
chr1 (95-190)||(17893853-17893949)
chr1 (86-164)||(18337343-18337421)
chr1 (86-158)||(1815277-1815349)
chr1 (92-160)||(19637786-19637854)
chr1 (112-164)||(38078654-38078706)
chr1 (86-158)||(51410045-51410117)
chr1 (134-189)||(3921656-3921711)
chr1 (119-186)||(40176595-40176662)
chr1 (86-164)||(40258900-40258978)
chr1 (123-193)||(40686762-40686832)
chr1 (86-164)||(46348350-46348428)
chr1 (107-160)||(7988439-7988492)
chr1 (127-168)||(18946042-18946083)
chr1 (119-168)||(24462270-24462319)
chr1 (113-158)||(50195459-50195504)
chr1 (142-190)||(24806933-24806981)
chr1 (120-172)||(28170388-28170439)
chr1 (116-160)||(31667443-31667487)
chr1 (104-168)||(43966816-43966880)
chr1 (121-164)||(14332422-14332465)
chr1 (113-164)||(41877464-41877515)
chr1 (121-208)||(46748910-46748997)
chr1 (112-158)||(17007954-17008000)
chr1 (86-164)||(22515854-22515932)
chr1 (125-186)||(24176811-24176873)
chr1 (89-159)||(29163351-29163421)
chr1 (86-148)||(37598861-37598923)
chr1 (86-164)||(40181885-40181963)
chr1 (86-164)||(42359416-42359494)
chr1 (118-167)||(7888106-7888155)
chr1 (114-162)||(11412763-11412811)
chr1 (112-164)||(22881609-22881661)
chr1 (86-130)||(32461420-32461464)
chr1 (86-164)||(1486671-1486754)
chr1 (135-178)||(11571585-11571628)
chr1 (113-152)||(19058850-19058889)
chr1 (119-158)||(26390133-26390172)
chr1 (126-173)||(34184673-34184720)
chr1 (113-151)||(24334699-24334737)
chr1 (98-164)||(36878475-36878541)
chr1 (134-168)||(50233411-50233445)
chr1 (119-164)||(6612171-6612216)
chr1 (127-164)||(8203835-8203872)
chr1 (124-200)||(18950925-18951002)
chr1 (119-164)||(24577186-24577231)
chr1 (85-130)||(25934675-25934720)
chr1 (114-170)||(40317810-40317867)
chr1 (120-164)||(2445884-2445928)
chr1 (89-165)||(12918958-12919034)
chr1 (72-124)||(14613061-14613113)
chr1 (124-164)||(31015057-31015097)
chr1 (86-158)||(33202923-33202995)
chr1 (136-164)||(40747790-40747818)
chr1 (86-130)||(40917808-40917852)
chr1 (119-207)||(47989469-47989556)
[»] scaffold0024 (1 HSPs)
scaffold0024 (121-192)||(18110-18181)
[»] scaffold0652 (1 HSPs)
scaffold0652 (90-164)||(433-507)
[»] scaffold0083 (1 HSPs)
scaffold0083 (98-152)||(45509-45563)
[»] scaffold0050 (1 HSPs)
scaffold0050 (98-164)||(70292-70358)
[»] scaffold0053 (1 HSPs)
scaffold0053 (86-141)||(8835-8890)
[»] scaffold0361 (1 HSPs)
scaffold0361 (86-164)||(14544-14619)
[»] scaffold0793 (1 HSPs)
scaffold0793 (86-158)||(4848-4922)
[»] scaffold0512 (1 HSPs)
scaffold0512 (99-141)||(5016-5058)
[»] scaffold0049 (2 HSPs)
scaffold0049 (114-164)||(63787-63837)
scaffold0049 (119-164)||(56936-56981)
[»] scaffold0122 (1 HSPs)
scaffold0122 (72-125)||(10260-10313)
[»] scaffold0103 (1 HSPs)
scaffold0103 (104-164)||(51825-51888)
[»] scaffold0011 (1 HSPs)
scaffold0011 (120-193)||(240022-240095)
[»] scaffold0007 (1 HSPs)
scaffold0007 (125-222)||(225274-225371)
[»] scaffold0571 (1 HSPs)
scaffold0571 (132-164)||(7704-7736)
[»] scaffold0450 (1 HSPs)
scaffold0450 (86-130)||(8591-8635)
[»] scaffold0003 (1 HSPs)
scaffold0003 (86-130)||(241653-241697)


Alignment Details
Target: chr2 (Bit Score: 134; Significance: 8e-70; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 51 - 228
Target Start/End: Original strand, 43585937 - 43586114
Alignment:
Q  51 aaaaggacttctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattat 150  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43585937 aaaaggacctctgttgcacgaacacttctgattgaaggtgtgtccatgtgtctgacacgtatcgtgtccgacaccgacacttgtgattacattgaattat 43586036  T
Q  151 gtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgttcatgtatgtgtctgtgct 228  Q
    |||||||||||||||||||||   |||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||    
T  43586037 gtcattttctcaaaattttatctgtgttgacgtgtcagtgtcagtaccgtgtccggtgtccatgtatgtgtctgtgct 43586114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 24067852 - 24067758
Alignment:
Q  76 ttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttta 170  Q
    |||||||||||| | |||| |  |||| ||||||| ||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  24067852 ttctgattgaagtcatgtctcaatgtctgacacgtgtcgtgtctgacaccgacacttgtgatttcatttaattatgacattttctcaaaatttta 24067758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 12224315 - 12224250
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatg 151  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  12224315 aggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatg 12224250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 2438686 - 2438758
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||| ||||| |||| || ||||||||||||||||||||||| |||||| |||||||||| |||||    
T  2438686 aggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 2438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 5040826 - 5040754
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||| | ||| ||||| | ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  5040826 aggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 5040754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 13501084 - 13501130
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13501084 cgacacttgtgattacattgaattatgtcattttcttaaaattttat 13501130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 18571064 - 18570986
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||  ||||| || | ||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||    
T  18571064 aggcgtgtcctggtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaa 18570986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 14373429 - 14373493
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgt 185  Q
    |||||||||| |||||||||||||||||||||||||   |||||||||||||  |||||||||||    
T  14373429 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 14373493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 14450797 - 14450845
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaatttt 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  14450797 acactgacacttgtgattacattgaattatgtgattttctcaaaatttt 14450845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 15972961 - 15972842
Alignment:
Q  90 gtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgt 189  Q
    ||||||| | ||| ||||||| ||||||||||||||||||||||| |||||| |||||| ||| ||||| ||||| | ||| |  ||| | |||||| ||    
T  15972961 gtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagt 15972862  T
Q  190 gtcagtatcgtgtctggtgt 209  Q
    ||| || |||| ||||||||    
T  15972861 gtccgtgtcgtatctggtgt 15972842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 37559067 - 37558997
Alignment:
Q  88 gcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||| || ||||| ||||||| ||  ||||||||||||||||||| ||||||||||||||||| |||||    
T  37559067 gcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt 37558997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 24067304 - 24067263
Alignment:
Q  127 acacttgtgattacattgaattatgtcattttctcaaaattt 168  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  24067304 acacttgtgattacattgaattatgtcattttcacaaaattt 24067263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 33884115 - 33884058
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||| |||||||||||||||| |||||| ||||| |||||||||||||| ||||||||    
T  33884115 gtgttcgacaccgacacttgtaattacactgaatcatgtcattttctcacaattttat 33884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 37211880 - 37211937
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||||||  ||||||||| ||||||||||||| |||||||||||| |||||||||    
T  37211880 gtgtccgacatagacacttgtaattacattgaattgtgtcattttctcgaaattttat 37211937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 20242693 - 20242773
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaa 165  Q
    |||||||||||  ||||| ||||||| | ||||||||||||||||| | | |||||| |||||||||| ||||||| ||||    
T  20242693 aaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaa 20242773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 8300214 - 8300265
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaa 165  Q
    |||||| |||||||||||| |||||||| | |||||||||||||||||||||    
T  8300214 gtgtccaacaccgacacttatgattacactaaattatgtcattttctcaaaa 8300265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 18512143 - 18512194
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||| ||||| ||||||||||||||||||| | ||||||||||||||||||    
T  18512143 gacactgacacatgtgattacattgaattatattattttctcaaaattttat 18512194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 14450708 - 14450778
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| |||||||||||||||| |||||||| ||||| ||||| | || |||| |||||| ||||    
T  14450708 tctgttgcacggacacttctgattgaagacgtgtcccggtgtctgacacatgtcctgtctgacaccaacac 14450778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 17895824 - 17895894
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||| | |||||| |||||||||||||||||   | ||||||||||||||||| ||||||| ||||    
T  17895824 tctgttgcatggacacttttgattgaaggcgtgtcctaatatccgacacgtatcgtgttcgacaccaacac 17895894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 18840984 - 18841058
Alignment:
Q  90 gtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| ||||| |||| || ||||||| ||||||||||||||| |||||| | |||||||| ||||| |||||    
T  18840984 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaa 18841058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 30404829 - 30404895
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| |||| || ||||||||||| ||||||||||| |||||| |||||||||| ||||| |||||    
T  30404829 gtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaa 30404895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 38117126 - 38117204
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||||| | |||||||||||| |||||||| ||||||  ||| ||||| ||||| |||||    
T  38117126 aggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaa 38117204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 45000837 - 45000891
Alignment:
Q  110 tatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| || |||||||||||| | ||||||||||||||| |||||||||||||||    
T  45000837 tatcgcgtacgacaccgacacatatgattacattgaattgtgtcattttctcaaa 45000891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 19536391 - 19536436
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 19536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 24009388 - 24009343
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||    
T  24009388 aaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 37491850 - 37491907
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||| ||||||||||| | | |||||||||||||| || ||||||||||||||||||    
T  37491850 gtgtctgacaccgacacatttaattacattgaattaagttattttctcaaaattttat 37491907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 44605141 - 44605206
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtc 186  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||| | |||||   |||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattattattggcgttgacgtgtc 44605206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 31026757 - 31026713
Alignment:
Q  116 gtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    ||||||||||||||  | |||||||||||||||||||||||||||    
T  31026757 gtccgacaccgacatatatgattacattgaattatgtcattttct 31026713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 37419846 - 37419802
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  37419846 aggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 10535765 - 10535804
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaa 10535804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 22131256 - 22131299
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||| |||||||||||||||  ||||||||||||||||    
T  22131256 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 22131299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 26787812 - 26787851
Alignment:
Q  133 gtgattacattgaattatgtcattttctcaaaattttatt 172  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  26787812 gtgattacatcgaattatgtcattttctcaaatttttatt 26787851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 44984652 - 44984699
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattt 168  Q
    |||| |||||||||||| |||||||||||| ||||||| |||||||||    
T  44984652 acacggacacttgtgatcacattgaattatatcattttttcaaaattt 44984699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 896275 - 896225
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| ||||||| | ||||||||||||| ||||| |||||||||||    
T  896275 gtgtccgacgccgacacatatgattacattgaaatatgtgattttctcaaa 896225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 5367284 - 5367206
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| | ||| || | || ||||||||||||||||||| | | |||||| |||||||||| |||| ||||||    
T  5367284 aggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaa 5367206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 11223864 - 11223910
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaat 166  Q
    ||||||||||||||| |||||| |||||||||| ||||| |||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaat 11223910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 11439844 - 11439802
Alignment:
Q  129 acttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||    
T  11439844 acttgtgattacactgaattatgttattttctcataattttat 11439802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 21624332 - 21624294
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatg 151  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  21624332 cgtgtccgacaccgacacttgtaattacactgaattatg 21624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 28596549 - 28596495
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    ||||| ||||||| ||||||||||||||||||||| | |||||| ||| ||||||    
T  28596549 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgt 28596495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 34006986 - 34007036
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||| |||||||||| | |||||||| |||||||||||| |||||||||    
T  34006986 gtgtcccacaccgacacctatgattacactgaattatgtcaatttctcaaa 34007036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 34993949 - 34994015
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    ||||||||||| ||||| ||||| | |||||| |||||| ||||| | | |||||||||||||||||    
T  34993949 aggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatgt 34994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 37411211 - 37411289
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||||  |||||| ||||| |||||| | | || ||| |||||||||| |||||||||||    
T  37411211 aggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaa 37411289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 42665665 - 42665615
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||| |||| |||||||||||||||| ||||||| || ||||||||||||    
T  42665665 acaccaacacatgtgattacattgaatcatgtcatcttttcaaaattttat 42665615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 6180865 - 6180910
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| ||| ||||| |||||||||||||| ||||||||||||||||    
T  6180865 cgactccggcacttatgattacattgaatcatgtcattttctcaaa 6180910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 12668423 - 12668468
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||| | |||||| |||||||||||||||| |||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaa 12668468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 18255974 - 18256019
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||||||||||| | |||||||| |||||||| |||||    
T  18255974 cgtgtccgacaccgacacttctaattacattaaattatgtgatttt 18256019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 36096330 - 36096375
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    |||||||||||| ||||| ||||||| |||||||||||| ||||||    
T  36096330 aaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacac 36096375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 8300188 - 8300224
Alignment:
Q  72 acacttctgattgaaggcgtgtccctgtgtccgacac 108  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  8300188 acacttctgattgaaggcgtgtcccggtgtccaacac 8300224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 30298444 - 30298537
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    ||||||||||||||||| ||  |||||| |||||||||||||||| | ||| | ||||   ||| |||||||| | ||  ||||||||||||||||    
T  30298444 gtgtccgacaccgacacatg--attacactgaattatgtcattttattaaattattatcggtgtcgacgtgtcggcgttcgtatcgtgtctggtgt 30298537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 40682024 - 40681996
Alignment:
Q  136 attacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||    
T  40682024 attacattgaattatgtcattttctcaaa 40681996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 5937366 - 5937497
Alignment:
Q  64 ttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaa 163  Q
    ||||||| |||||||  ||||||||||| | |  |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  5937366 ttgcacggacacttcatattgaaggcgtattctggtgtccgacatgtatcgtgaccgacacagacacttgtgattacattgaattatgtcattttctcaa 5937465  T
Q  164 aattttattcttgttgacgtgtccgtgtcagt 195  Q
    |||||||| | |||||||||||| ||||||||    
T  5937466 aattttatccgtgttgacgtgtctgtgtcagt 5937497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 25956558 - 25956464
Alignment:
Q  64 ttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttc 159  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25956558 ttgcacggacacttctgattgaaggcgtgtccc-gtgtccgacatgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttc 25956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 1885632 - 1885542
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| || |||||||| ||||| ||||||| |||||    
T  1885632 cgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgtccgtatcagtgtcgtgtccggtgt 1885542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 22801671 - 22801831
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacac-----------cgacacttgtgattacattgaatt 148  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||| || | ||||| |||||           ||||||||||||||||| ||||||    
T  22801671 tctgttgcaccagcacttctgattgaaggcgtgtcccagtgtccgacaagtgtggtgtcagacactgacaatacaccgacacttgtgattacagtgaatt 22801770  T
Q  149 atgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    |||||||| ||||||||||| ||   ||||||||||||||||| ||| |||| || |||||    
T  22801771 atgtcattatctcaaaatttgatcggtgttgacgtgtccgtgttagtgtcgtttccggtgt 22801831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 48963995 - 48964114
Alignment:
Q  62 tgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtcc----------gacaccgacacttgtgattacattgaattatg 151  Q
    ||||||| | |||||||||||||||||  |||||| |||| |||||||||||||||||          |||||| ||||||||||||| |||||||||||    
T  48963995 tgttgcatggacacttctgattgaaggtatgtcccggtgttcgacacgtatcgtgtccacacttacacgacaccaacacttgtgattaaattgaattatg 48964094  T
Q  152 tcattttctcaaaattttat 171  Q
    ||||||||||| ||||||||    
T  48964095 tcattttctcacaattttat 48964114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 2144533 - 2144591
Alignment:
Q  114 gtgtccgacacc-gacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2144533 gtgtccgacacctgacacgtgtgattacattgaattatgtcattttctcaaaattttat 2144591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 21880244 - 21880166
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||  ||||| |||| || ||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  21880244 aggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaa 21880166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 25481981 - 25481916
Alignment:
Q  99 tgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| ||||| |||||||||||||||| |||||||| |||||| |||||||||| ||||| |||||    
T  25481981 tgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaa 25481916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 39138537 - 39138452
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttta 170  Q
    |||||||||||| ||||  |||| |||||||||||||||||||||  | | |||||| |||||||||| ||||||| |||| ||||    
T  39138537 aaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgattttctaaaaaattta 39138452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 2143866 - 2143902
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaaattt 168  Q
    |||||||||||||||||||||||||||||||||||||    
T  2143866 tgtgattacattgaattatgtcattttctcaaaattt 2143902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 13094709 - 13094765
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||| |||||||||||| |||||||||||||||||| |  |||||||||||||||||    
T  13094709 tgtcggacaccgacactagtgattacattgaattatatagttttctcaaaattttat 13094765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 598300 - 598226
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    ||||||||||| ||||| ||||||| ||||||| |||||||||||||   |||||||| ||||| || |||||||    
T  598300 aggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttct 598226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 8234238 - 8234160
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| | ||||| |||| || ||||||||||||||| ||||||| | |||| |||||||||| ||||| |||||    
T  8234238 aggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaa 8234160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 27945100 - 27945010
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||| | ||| |  ||| | |||||| ||||| || ||||||| |||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt 27945010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 28155634 - 28155584
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||||| ||||||  ||||||||| |||||||||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaa 28155584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 36013799 - 36013837
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  36013799 gacaccgacacgtgtgattacattgaattatgtcatttt 36013837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 15680898 - 15680829
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||| | ||||| ||||||| ||||||||||||||||||||| | |||||| | |||||||| |||||    
T  15680898 cgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 15680829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 21864897 - 21864836
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattat 150  Q
    |||||||| ||||| ||||||| |||||||||||| |||||||||| |||||| | ||||||    
T  21864897 cgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattat 21864836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 38134410 - 38134451
Alignment:
Q  123 accgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||| | |||||||||||||||||||||||||||||||    
T  38134410 accgacacatatgattacattgaattatgtcattttctcaaa 38134451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 44172898 - 44172935
Alignment:
Q  127 acacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| |||||||||||||||||||||||||||||||||    
T  44172898 acacatgtgattacattgaattatgtcattttctcaaa 44172935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 44317293 - 44317338
Alignment:
Q  126 gacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||    
T  44317293 gacacttatgattacattgaattatgtcatttttttaaaattttat 44317338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 7197271 - 7197327
Alignment:
Q  93 tccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaatta 149  Q
    |||| ||||| |||| || | ||||||||||||||||||||| ||||||||||||||    
T  7197271 tcccggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaatta 7197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 7438764 - 7438720
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaa 7438720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 9050133 - 9050185
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||| ||||| |||||||| |||||| ||||||||||| ||||||||||||    
T  9050133 cgacacagacacatgtgattatattgaactatgtcattttttcaaaattttat 9050185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 12843027 - 12843079
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| | ||||| |||||||| ||| ||||||||||||||||||||    
T  12843027 tcgtgtccgacccagacacgtgtgattatattcaattatgtcattttctcaaa 12843079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 35238192 - 35238236
Alignment:
Q  127 acacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||    
T  35238192 acacgtgtgattatattgaattatgtcattttctcaaaatattat 35238236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 4909220 - 4909165
Alignment:
Q  109 gtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| ||||||||||| ||||| | |||||||| |||||||||| |||||||||||    
T  4909220 gtattgtgtccgacactgacacatatgattacaatgaattatgtaattttctcaaa 4909165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 5409798 - 5409881
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtc-----cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||||| |||||||     |||||||||||||||| ||| || |||||||||| ||||| |||||    
T  5409798 aggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaa 5409881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 36196838 - 36196787
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||| |||||||||||||  |||||||||||  |||||||||||||||||    
T  36196838 gacaccaacacttgtgattatgttgaattatgttgttttctcaaaattttat 36196787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 37776039 - 37775996
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||    
T  37776039 acactgacacatgtgattacatttaattatgtcattttctcaaa 37775996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 37820138 - 37820087
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||| |||||||| ||||||||| |||||||| ||||| ||||||||||||    
T  37820138 gacactgacacttgcgattacattaaattatgttattttttcaaaattttat 37820087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 2525843 - 2525889
Alignment:
Q  118 ccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||| | |||||| ||||||||||||||||| ||||||    
T  2525843 ccgacaccgacacatatgattatattgaattatgtcatttgctcaaa 2525889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 6091371 - 6091333
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaaattttatt 172  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  6091371 tgattatattgaattatatcattttctcaaaattttatt 6091333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 10893342 - 10893392
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||| ||| |||| || ||||||||| ||||||||||||||||||||    
T  10893342 gtgtccgataccaacacatgcgattacattcaattatgtcattttctcaaa 10893392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 10893864 - 10893910
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    ||||| |||||| |||| |||||||||||| ||||||||||||||||    
T  10893864 gtgtcagacaccaacacatgtgattacattcaattatgtcattttct 10893910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 17257990 - 17258028
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  17257990 gacaccgacacttatgattacattgaattatgttatttt 17258028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 172
Target Start/End: Complemental strand, 31377036 - 31377006
Alignment:
Q  142 ttgaattatgtcattttctcaaaattttatt 172  Q
    |||||||||||||||||||||||||||||||    
T  31377036 ttgaattatgtcattttctcaaaattttatt 31377006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 9037719 - 9037784
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtc 186  Q
    |||| ||||| |||||||| |||||| ||| ||||||| ||||||||||||   ||||||||||||    
T  9037719 acacagacacatgtgattatattgaactatatcattttttcaaaattttatctatgttgacgtgtc 9037784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 10702551 - 10702595
Alignment:
Q  126 gacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||    
T  10702551 gacacttataattacattgaat-atgtcattttctcaaaattttat 10702595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 18678193 - 18678160
Alignment:
Q  133 gtgattacattgaattatgtcattttctcaaaat 166  Q
    ||||||| ||||||||||||||||||||||||||    
T  18678193 gtgattatattgaattatgtcattttctcaaaat 18678160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 24339701 - 24339656
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaa 24339656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 26733370 - 26733273
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    ||||||||||||||||||| | | |||| | |||||||||| ||||| ||||| | |||    ||| |||||||| ||||| || |||||||||||||    
T  26733370 tcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgt 26733273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 31808509 - 31808554
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| |||| |||||||||||||| || |||||||||||||||    
T  31808509 cgacaccaacacatgtgattacattgacttgtgtcattttctcaaa 31808554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 48438604 - 48438559
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaa 165  Q
    ||||||||||| ||| ||||||||||||||||| ||||| ||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaaa 48438559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 5835337 - 5835261
Alignment:
Q  88 gcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| || || ||||| | || |||| ||||||||||| | | |||||| |||||||||| |||||||||||    
T  5835337 gcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaa 5835261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 18212999 - 18213079
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaa 165  Q
    |||||||||||| ||||| || | |  ||||||||||||||||||| | | |||||| | |||||||| ||||||| ||||    
T  18212999 aaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgattttctaaaaa 18213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 24339745 - 24339701
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| || |||| |||||||||||||||||||    
T  24339745 aggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 35917393 - 35917425
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||| |||||||||||||    
T  35917393 tgtgattacattgaattatatcattttctcaaa 35917425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 13307993 - 13307884
Alignment:
Q  62 tgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctc 161  Q
    |||||||| ||||||||||||||||||| ||||   ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13307993 tgttgcaccaacacttctgattgaaggcatgtcatggtgtctgacacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcattttctc 13307894  T
Q  162 aaaattttat 171  Q
    ||||||||||    
T  13307893 aaaattttat 13307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 44362772 - 44362673
Alignment:
Q  72 acacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||| |||| |||||||  ||||||| |||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  44362772 acacttctgatttaaggtgtgtcccgatgtccgatacgtgtcgtgtctgacaccaacacttgtgattacattaaattatgtcattttctcaaaattttat 44362673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 37496833 - 37496717
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccg-----------acaccgacacttgtgattacattgaatt 148  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||| || |||||||||           ||||||||||||||||||||||||||||    
T  37496833 tctgttgcacggacacttatgattgaaggcgtgtcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaatt 37496734  T
Q  149 atgtcattttctcaaaa 165  Q
    |||||||||||||||||    
T  37496733 atgtcattttctcaaaa 37496717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 13117493 - 13117435
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatt 172  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  13117493 gtgtccgacaccgacacttgtgattacattgaattttgtcattttctccaaattttatt 13117435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 23292953 - 23293031
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||| |||| | |||||||||| ||||| |||||    
T  23292953 aggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaa 23293031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 12797310 - 12797377
Alignment:
Q  91 tgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||| ||||| |||| |||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  12797310 tgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 12797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 13484088 - 13484030
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacatt-gaattatgtcattttctcaaaattttat 171  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  13484088 gtgtccgacactgacacttgtgattacatttgaattatgttattttctcaaaattttat 13484030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 49431119 - 49431046
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||| ||||  ||||||| ||||||||||||||||||||| | |||||| |||||||||| |||||    
T  49431119 aaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttt 49431046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 11797630 - 11797715
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtca---ttttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtc 203  Q
    ||||||||||||||||||||||| ||||||||||   |||| |||||||||||||  |||||| ||| |||||||| | |||||||    
T  11797630 acaccgacacttgtgattacattaaattatgtcatttttttttcaaaattttattggtgttgatgtgcccgtgtcaatgtcgtgtc 11797715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 29205533 - 29205458
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||| ||||| |||| || |||||||| |||||||||||||| |||||| |||||||||| ||||| |||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaa 29205458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 8423685 - 8423763
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||  | |||||||||||||||||| || | |||||| |||||||||| |||||||||||    
T  8423685 aggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaa 8423763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 10635120 - 10634997
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac------------ttgtgattacattgaat 147  Q
    |||||||||||||| |||||||||||||   |||||  |||||||||||||||| |||| |||||||| ||            ||||||| |||||||||    
T  10635120 tctgttgcacgaactcttctgattgaagagttgtccgggtgtccgacacgtatcatgtctgacaccgagacaacatcgatattttgtgataacattgaat 10635021  T
Q  148 tatgtcattttctcaaaattttat 171  Q
    ||||||||||| ||||||||||||    
T  10635020 tatgtcattttttcaaaattttat 10634997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 21945583 - 21945517
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| |||| || || |||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  21945583 gtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaa 21945517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 28964215 - 28964293
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| || | || ||||||||||||| ||||||||| |||||| |||||||||| ||||| |||||    
T  28964215 aggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaa 28964293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 16073474 - 16073421
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatg 151  Q
    ||||| |||| |||||||||||||||||||||||||| |||||| |||||||||    
T  16073474 gtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatg 16073421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 22799893 - 22799951
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttg 179  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  22799893 cgacactgacacgtgtgattacattgaattatgtcattttctaaaaa--ttattcttgttg 22799951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 5998934 - 5998835
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttc 159  Q
    ||||||||||  |||||| |||||||||| ||||||  |||||||||||||   ||||| ||||  ||||||| ||||| ||||||||||||| ||||||    
T  5998934 tctgttgcaccgacacttatgattgaaggtgtgtccaggtgtccgacacgtgatgtgtctgaca-tgacacttatgattgcattgaattatgttattttc 5998836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 16303266 - 16303350
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtc 203  Q
    |||||||||||||||| |||||| | |||||| ||||||| ||||||| ||||  |||| | |||||| ||||| ||||||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtc 16303350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 54580008 - 54580068
Alignment:
Q  104 gacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||||| ||||| |||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaa 54580068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 10164861 - 10164904
Alignment:
Q  126 gacacttgtgattacattgaattatgtcattttctcaaaatttt 169  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  10164861 gacacttgtgattacattgaattatgtcattttttcaagatttt 10164904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 34306771 - 34306826
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattaca 141  Q
    ||||||||| | ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  34306771 aggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 34306826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 39619045 - 39619092
Alignment:
Q  62 tgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacg 109  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  39619045 tgttgcacggacacttctgattgaaggtgtgtcccggtgtccgacacg 39619092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 683115 - 683066
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  683115 gtgtccgacac-gacacatgtgattacattcaattatgtcattttctcaaa 683066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 28663533 - 28663499
Alignment:
Q  137 ttacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||||||||||||||||||||||||||    
T  28663533 ttacattgaattatgtcattttctcaaaattttat 28663499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 40224468 - 40224541
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctca 162  Q
    ||||||||  |||| || || |||| ||||| |||||||||| | |||||||||| ||||||||||||||||||    
T  40224468 cgtgtcccaatgtcggaaacatatcatgtccaacaccgacacatatgattacattaaattatgtcattttctca 40224541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 42640594 - 42640549
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||    
T  42640594 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 24613702 - 24613746
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||  |||||||||||||||| |||||||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaa 24613746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 715572 - 715646
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtcc--gacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||||||||| |||| || |||||| |  |||||| |||||||| |||||| |||||||||| |||||    
T  715572 aggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatttt 715646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 752898 - 752972
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtcc--gacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||||||||| |||| || |||||| |  |||||| |||||||| |||||| |||||||||| |||||    
T  752898 aggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatttt 752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 18513243 - 18513286
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| ||||| | |||||||||||||||||||||||||||||||    
T  18513243 acactgacacatatgattacattgaattatgtcattttctcaaa 18513286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 21345523 - 21345606
Alignment:
Q  109 gtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtc 192  Q
    |||||||||| ||||||||||    |||||||||||| |||||| ||||| ||||| | |||||  ||||||||||| ||||||    
T  21345523 gtatcgtgtctgacaccgacataaatgattacattgagttatgttattttttcaaattattattggtgttgacgtgtgcgtgtc 21345606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 30299006 - 30298967
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttt 30298967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 30327874 - 30327835
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttt 30327835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 34589682 - 34589751
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttg---tgattacattgaattatgtcattttctcaaa 164  Q
    ||||| || |||||||||||||||||| |||||      |||||||||||||||||||||||||||||||    
T  34589682 gtgtcagatacgtatcgtgtccgacactgacacgacacatgattacattgaattatgtcattttctcaaa 34589751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 56049956 - 56049897
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattt 157  Q
    ||||| || ||||||| |||| ||||||||||| | ||||||||||||| ||||||||||    
T  56049956 gtgtcggatacgtatcatgtctgacaccgacacatatgattacattgaactatgtcattt 56049897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 2361954 - 2362020
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||||  ||||||||||||||||||||| | |||||| | |||||||| ||||| |||||    
T  2361954 gtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaa 2362020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 5654606 - 5654636
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||||    
T  5654606 tgattacattgaattatgtcattttctcaaa 5654636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 9299017 - 9298943
Alignment:
Q  95 cctgtgtccgacacgtatc-gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattt 168  Q
    ||||||||||||| || || |||| ||| ||| |||  |||||| |||||||||||||||||||||| |||||||    
T  9299017 cctgtgtccgacatgtgtcagtgttcgatacctacatgtgtgatgacattgaattatgtcattttcttaaaattt 9298943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 9988706 - 9988744
Alignment:
Q  126 gacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  9988706 gacacatgtgattacattcaattatgtcattttctcaaa 9988744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 10546192 - 10546162
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||||    
T  10546192 tgattacattgaattatgtcattttctcaaa 10546162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 27624092 - 27624142
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttt 169  Q
    |||||||||||| |||||||| |||||||||| || |||| ||||||||||    
T  27624092 cgacaccgacacatgtgattagattgaattatatccttttatcaaaatttt 27624142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 33950200 - 33950150
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||||||||| | |||||||||| |||||||| |||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttctcaaa 33950150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 5414127 - 5414172
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||    
T  5414127 aaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 6879459 - 6879504
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||||||||||||| |||||| | |||||||| |||||    
T  6879459 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttt 6879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 12895116 - 12895161
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| ||||| ||||||||||| ||||| |||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaa 12895161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 35062520 - 35062452
Alignment:
Q  102 ccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||| || ||||||  |||||| |||||| ||||||||||||||||| | ||||| ||||||||||||    
T  35062520 ccgacatgtgtcgtgttagacaccaacacttatgattacattgaattatattatttt-tcaaaattttat 35062452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 47492436 - 47492399
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  47492436 acactgacacttgtgattacattaaattatgtcatttt 47492399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 848009 - 847965
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||| |||| | |||||||||| |||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaa 847965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 4157229 - 4157169
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||| |||| || ||||||||||||||||||||||| ||| || | |||||||| |||||    
T  4157229 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 4157516 - 4157456
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||| |||| || ||||||||||||||||||||||| ||| || | |||||||| |||||    
T  4157516 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 8457971 - 8457939
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||| ||||||||||||||||||||    
T  8457971 tgtgattacattcaattatgtcattttctcaaa 8457939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 13484126 - 13484078
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacac 108  Q
    |||||||||| |||||||||||||||| || ||| || |||||||||||    
T  13484126 tctgttgcaccaacacttctgattgaatgcatgttccagtgtccgacac 13484078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 14465299 - 14465339
Alignment:
Q  124 ccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| | |||||| ||||||||||||||||||||||||    
T  14465299 ccgacacatatgattaaattgaattatgtcattttctcaaa 14465339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 26276026 - 26276054
Alignment:
Q  136 attacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||    
T  26276026 attacattgaattatgtcattttctcaaa 26276054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 30982834 - 30982878
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| ||||||| |||||||||||    
T  30982834 aggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 1334774 - 1334630
Alignment:
Q  65 tgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||| ||||||||||||||||| ||||||  |||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||    
T  1334774 tgcacggacacttctgattgaaggtgtgtcctggtgttcgacacgcatcgtgttcgacaccgacatttgtgattacattgaattatgtccttttttcaaa 1334675  T
Q  165 attttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    ||||||| | |||  | ||||| |||||||| ||||||| |||||    
T  1334674 attttatccgtgtcaatgtgtctgtgtcagtgtcgtgtccggtgt 1334630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 209
Target Start/End: Original strand, 26402624 - 26402772
Alignment:
Q  63 gttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtca--ttttct 160  Q
    |||||||| ||||||||||||||||  ||||| | |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||| |    
T  26402624 gttgcacggacacttctgattgaagaagtgtctcggtgtccaacatgtatcgtgtccgacaccgacacttgtgattacactgaattatgtcatttttttt 26402723  T
Q  161 caaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    |||||||||||  |||| ||  |||| |||||||| || |||| |||||    
T  26402724 caaaattttatcattgtcgatctgtctgtgtcagtgtcatgtccggtgt 26402772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 6751878 - 6751934
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6751878 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 6751934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 60 - 190
Target Start/End: Complemental strand, 19369923 - 19369805
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttc 159  Q
    ||||||||||| ||||||||||||||||||||||| | ||||| ||||||           |||||||||||||||||||||||||||||||||||||||    
T  19369923 tctgttgcacggacacttctgattgaaggcgtgtctcggtgtc-gacacg-----------acaccgacacttgtgattacattgaattatgtcattttc 19369836  T
Q  160 tcaaaattttattcttgttgacgtgtccgtg 190  Q
    |||||||||||| | |||  |||||||||||    
T  19369835 tcaaaattttatccgtgtcaacgtgtccgtg 19369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 32225331 - 32225442
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttc 159  Q
    |||| ||||| |||||| ||||||||||| ||||||  |||||||||| |  ||||||||||||||||||| |||||||||||||| | | || ||||||    
T  32225331 tctgctgcacaaacactcctgattgaaggtgtgtccaggtgtccgacaggggtcgtgtccgacaccgacacctgtgattacattgactcacgttattttc 32225430  T
Q  160 tcaaaattttat 171  Q
    ||||||||||||    
T  32225431 tcaaaattttat 32225442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 28715387 - 28715309
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| |||||  |||||| ||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  28715387 aggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaa 28715309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 29959281 - 29959182
Alignment:
Q  73 cacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacacc-gacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||| |||||||||  |||||||  ||||||||||||||||| ||||||||  | || | || ||||||||||||||||||||||||||||||||||||    
T  29959281 cacttttgattgaagtagtgtcccgctgtccgacacgtatcgtatccgacacttgtcattagtcattacattgaattatgtcattttctcaaaattttat 29959182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 34595222 - 34595148
Alignment:
Q  90 gtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  34595222 gtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 34595148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 10031621 - 10031577
Alignment:
Q  127 acacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10031621 acacttgtgattacattgaattatgtcattttctcaaaattttat 10031577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 28152190 - 28152118
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||| |||||| ||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||    
T  28152190 aggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 28152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 26178601 - 26178527
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgt 134  Q
    |||| |||||| |||||||||||||||||  ||||||  |||||||||||| |||||||||||||||| ||||||    
T  26178601 tctgatgcacggacacttctgattgaaggtatgtcccgatgtccgacacgtgtcgtgtccgacaccgatacttgt 26178527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 22746016 - 22745964
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  22746016 cgacaccgacacttgtgattacattgaaatataacattttctcaaaattttat 22745964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 5579707 - 5579632
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgt 200  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||   ||| ||||| | |||||||| |||||    
T  5579707 cgacacttgtgactacattgaactatgtcattttctcaaaattttatcggtgtcgacgtattcgtgtcagcatcgt 5579632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 785385 - 785455
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||||||||||||||| ||||||  |||||||||||  ||| ||| ||||||||||||    
T  785385 tctgttgcacggacacttctgattgaaggtgtgtcctggtgtccgacacacatcatgttcgacaccgacac 785455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 7378045 - 7377987
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttta 170  Q
    ||||||||||||||||||| | | ||||||||||||||||| ||||||||||| |||||    
T  7378045 tcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaattttta 7377987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 785455 - 785492
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcatt 156  Q
    ||||||||||||||||||||||||||||||||||||||    
T  785455 cgacaccgacacttgtgattacattgaattatgtcatt 785492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 10158039 - 10157998
Alignment:
Q  123 accgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  10158039 accgacacatgtgattacattgaattatgtcattttctcaaa 10157998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 9024176 - 9024248
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgt 191  Q
    |||||| ||||| | ||||||||||||||||||||||||||||||| | | |||  ||| |||||||||||||    
T  9024176 cgacactgacacatatgattacattgaattatgtcattttctcaaattatcatttgtgtcgacgtgtccgtgt 9024248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 16517004 - 16516948
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||| |||||||||||| |||||||||||||||||| |  |||||||||||||||||    
T  16517004 tgtcggacaccgacactagtgattacattgaattatatagttttctcaaaattttat 16516948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 426508 - 426559
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||| |||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaa 426559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 13364675 - 13364750
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||  ||||| |||| ||||||||||| |||||||||| | |||||||| |||||||| | |||||||||||    
T  13364675 cgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaa 13364750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 32978869 - 32978932
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    |||||||| ||||| |||| || ||||||||||||||||||||||| |||||| | ||||||||    
T  32978869 cgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgt 32978932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 7265572 - 7265638
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| |||| |||| ||||||||||||||||| | | |||||| |||||||||| |||||||||||    
T  7265572 gtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaaa 7265638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 7977825 - 7977875
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaa 7977875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 17841556 - 17841634
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| | ||||| ||||| | ||||||||||||||| ||||||| |||||| | |||||||| ||||| |||||    
T  17841556 aggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaa 17841634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 33001268 - 33001334
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||||| ||||||||||||||||||| | | |||||||| |||||||| ||||| |||||    
T  33001268 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaa 33001334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 31430326 - 31430277
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaaattttattcttgttgac 181  Q
    |||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  31430326 tgtgattacatttaatcatgtcattttctcaaaattttattggtgttgac 31430277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 4859114 - 4859158
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  4859114 gacactgacacgtgtgattacattggattatgtcattttctcaaa 4859158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 7942373 - 7942269
Alignment:
Q  66 gcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatc-gtgtccgacaccg-----acacttgtgattacattgaattatgtcattttc 159  Q
    |||| ||||||||||||  |||| |||||   ||||||||||||| || ||||||||||| |     |||| ||||||||||||||||||||||||| ||    
T  7942373 gcaccaacacttctgatctaaggtgtgtcgtggtgtccgacacgtgtcagtgtccgacacagcactgacacatgtgattacattgaattatgtcattgtc 7942274  T
Q  160 tcaaa 164  Q
    |||||    
T  7942273 tcaaa 7942269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 16503738 - 16503682
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||| |||||| ||||| |||||||||||||||||| |  |||||||||||||||||    
T  16503738 tgtcggacaccaacactagtgattacattgaattatatagttttctcaaaattttat 16503682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 10335378 - 10335421
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||| | |||||||||| ||||||||||||||||||||    
T  10335378 acaccgacacatctgattacattcaattatgtcattttctcaaa 10335421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 853826 - 853904
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| || |||| ||||| | |||| |||||||||||||||||| ||| || | |||||||| ||||| |||||    
T  853826 aggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaa 853904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 4878034 - 4877969
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    |||||||||| |||||| |||| || ||||||||||||||||||||||| |||| | | ||||||||    
T  4878034 aggcgtgtcc-tgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgt 4877969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 9629443 - 9629397
Alignment:
Q  118 ccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||| | | ||||||||||||||||| |||||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaa 9629397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 17327617 - 17327655
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacac 124  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  17327617 aggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 31327868 - 31327806
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaaa-ttttattcttgttgacgtgtc 186  Q
    |||||||||||||| |||| |||||||| ||||||| |||| |||||||  ||||||||||||    
T  31327868 cgacacttgtgattgcattaaattatgtaattttcttaaaatttttattgatgttgacgtgtc 31327806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 34058018 - 34057972
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    ||||| ||||||||||| |||||||||| | ||||||||||||||||    
T  34058018 gtgtctgacaccgacacatgtgattacagtcaattatgtcattttct 34057972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 34197170 - 34197112
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgt 177  Q
    |||||||||||||| | |||||| |||||||| ||| ||||| ||||||||||| ||||    
T  34197170 cgacaccgacacttataattacactgaattatatcactttcttaaaattttattgttgt 34197112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 5635903 - 5635940
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  5635903 tgattatattgaattatgtcattttcttaaaattttat 5635940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 6898274 - 6898319
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattt 157  Q
    ||||||||||||||||||||||| |||||| | |||||||| ||||    
T  6898274 tcgtgtccgacaccgacacttgtaattacacttaattatgtaattt 6898319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 9617493 - 9617448
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||| | | ||||||||||||||||| |||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaa 9617448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 10770674 - 10770719
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaa 10770719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 16388211 - 16388248
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattat 150  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  16388211 cgtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 16488545 - 16488590
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    |||||||||||| ||| | ||||||| |||||||||||||||||||    
T  16488545 aaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 16766756 - 16766711
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaa 16766711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 23771667 - 23771610
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaa 146  Q
    |||||| ||||||| ||||| | |||||||||||||||||| |||| |||||| ||||    
T  23771667 cgtgtctctgtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaa 23771610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 8365475 - 8365519
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| |||||||||| ||||||||    
T  8365475 aggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 8776966 - 8777018
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||| |||||||| |||||| |||||| ||| ||||| |||||    
T  8776966 tcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaa 8777018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 10339081 - 10339125
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| |||| || |||||||||||||||||||    
T  10339081 aggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 14514834 - 14514794
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaaattttatt 172  Q
    ||||||||||||||||||| ||||||| | |||||||||||    
T  14514834 tgtgattacattgaattatatcatttttttaaaattttatt 14514794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 15489733 - 15489777
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||| ||||||||||||| ||| ||||| |||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaa 15489777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 16766800 - 16766756
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| | |||||||||||||||||    
T  16766800 aggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 19040418 - 19040366
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||| ||||| | | |||||| |||||||||| |||||||||||    
T  19040418 tcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaa 19040366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 24645561 - 24645501
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||| ||||||| ||||||| ||||||||||||||| | || | |||||||||| |||||    
T  24645561 gtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttt 24645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 30851674 - 30851630
Alignment:
Q  104 gacacgtatcgtgtccgacaccgacacttgtgattacattgaatt 148  Q
    ||||||| ||||||||||||||||||| | | |||||||||||||    
T  30851674 gacacgtgtcgtgtccgacaccgacacatataattacattgaatt 30851630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 34868157 - 34868209
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||||| |  ||||||||||||||||||||  ||| ||||||||||||||    
T  34868157 cgacaccgagaaatgtgattacattgaattatgatattctctcaaaattttat 34868209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 26915201 - 26915321
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgac-----acttgtgattacattgaattatgtcattttctcaaaattttattcttgttg 179  Q
    ||||||||||||  |||| |||||||||||||||||||||||||     ||||||||||||||| ||||||||||||||||||||||||||| | ||| |    
T  26915201 aaggcgtgtcccaatgtctgacacgtatcgtgtccgacaccgacacgacacttgtgattacattaaattatgtcattttctcaaaattttatccgtgtcg 26915300  T
Q  180 acgtgtccgtgtcagtatcgt 200  Q
    |||||||||||||||| ||||    
T  26915301 acgtgtccgtgtcagtgtcgt 26915321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 203
Target Start/End: Complemental strand, 42874620 - 42874497
Alignment:
Q  80 gattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttg 179  Q
    ||||||||||||||| |  ||||||||| || | |||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||    ||| |    
T  42874620 gattgaaggcgtgtctcgatgtccgacatgtgttgtgtccaacactgacacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcg 42874521  T
Q  180 acgtgtccgtgtcagtatcgtgtc 203  Q
    |||||||||||| ||| |||||||    
T  42874520 acgtgtccgtgttagtgtcgtgtc 42874497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 34073922 - 34074030
Alignment:
Q  63 gttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctca 162  Q
    ||||||| ||||||| ||||||||||||||||    ||| ||||||||  |||||| || | |||||||| |||||||||| |||||||||||||| |||    
T  34073922 gttgcacaaacacttttgattgaaggcgtgtcatgatgtgcgacacgtgacgtgtctgatatcgacacttatgattacattaaattatgtcattttttca 34074021  T
Q  163 aaattttat 171  Q
    |||||||||    
T  34074022 aaattttat 34074030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 10497746 - 10497892
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacacc-----------gacacttgtgattacattgaatt 148  Q
    |||||||||||||||| |||||||||||||||||||| ||||  |||| ||||  ||| |||||||           |||||||||||||||||  ||||    
T  10497746 tctgttgcacgaacacctctgattgaaggcgtgtcccggtgtttgacatgtattatgttcgacaccgacacgatactgacacttgtgattacatcaaatt 10497845  T
Q  149 atgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagt 195  Q
    |||| |||||||||||||||||| | ||| | |||||| ||||||||    
T  10497846 atgttattttctcaaaattttatccgtgtcggcgtgtctgtgtcagt 10497892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 27733905 - 27733854
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  27733905 gacaccaacacttgtgattacattgaattatatcattttctcaaaattttat 27733854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 31119140 - 31119097
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaaattt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31119140 cgacacttgtgattacattgaattatgtcattttctcaaaattt 31119097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 40332283 - 40332205
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||| ||||  ||||||| |||||||| |||||||||||||| |||||| |||||||||| |||||||||||    
T  40332283 aggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaa 40332205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 20873143 - 20873083
Alignment:
Q  104 gacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||| ||||| |||||    
T  20873143 gacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaa 20873083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 24295138 - 24295189
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  24295138 gacaccgacacttgtgattacattaaattgtgtcattttctcacaattttat 24295189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 22600579 - 22600497
Alignment:
Q  128 cacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtc-agtatcgtgtctggtgt 209  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||  |||||| ||||| |||||  || |||||||||||||    
T  22600579 cacttgtgattatattgaattatgtcattttctttaaattttattggtgttgatgtgtcagtgtcgtgtgtcgtgtctggtgt 22600497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 1639532 - 1639487
Alignment:
Q  136 attacattgaattatgtcattttctcaaaattttattcttgttgac 181  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  1639532 attacattgaattatgtcattttctcaaaatattattattgttgac 1639487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 4948718 - 4948666
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 4948666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 5813684 - 5813636
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgt 134  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  5813684 aggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgt 5813636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 26434254 - 26434194
Alignment:
Q  104 gacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| |||||| |||||||||||| | |||| |||||||||||| |||||||||||    
T  26434254 gacacgtattgtgtccaacaccgacacttttaattatattgaattatgtgattttctcaaa 26434194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 31548294 - 31548338
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  31548294 gacaccgacacatgtgattacattgaattatgtcattttatcaaa 31548338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 3025640 - 3025565
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||| | ||||| ||||||| ||||||||||||| ||||| | | |||||| |||||||||| |||||||||||    
T  3025640 cgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaa 3025565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 3954376 - 3954431
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttta 170  Q
    |||||||||| ||||| |||||||| |||||| || ||||||||||||||||||||    
T  3954376 tgtccgacacggacacatgtgattaaattgaaatacgtcattttctcaaaatttta 3954431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 18170478 - 18170533
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttta 170  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||| ||||| |||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaattttta 18170533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 18634046 - 18634101
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttta 170  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||| ||||| |||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaattttta 18634101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 20679361 - 20679440
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||| ||||| ||||||| | | ||| ||||||||||||| | |||||| |||| ||||| |||||||||||    
T  20679361 aaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaa 20679440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 1433409 - 1433359
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||| | ||| ||||||||| |||||||||||||||||||    
T  1433409 gtgtccgacaccgacgcatgttattacattggattatgtcattttctcaaa 1433359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 12985456 - 12985406
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||  | ||||||||||||||||||| |||||||||||    
T  12985456 gtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaa 12985406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 14134791 - 14134685
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgt 185  Q
    ||||||||||  ||| | ||||||| ||||||  ||||||||||  | | |||||| |||||||||| ||||||||||| | ||| | |||| |||||||    
T  14134791 aggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgt 14134692  T
Q  186 ccgtgtc 192  Q
    |||||||    
T  14134691 ccgtgtc 14134685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 36450721 - 36450799
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||  ||||| ||||||  |||||||||||||| |||||||| |||||| |||||| ||| ||||| |||||    
T  36450721 aggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaa 36450799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 31236569 - 31236622
Alignment:
Q  111 atcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||| ||||||||| | | ||||||||||||||||| |||||||||||    
T  31236569 atcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaa 31236622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 34450987 - 34451032
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||    
T  34450987 aaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 44462165 - 44462234
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||| ||||| |||| |||||||||| ||||||||||| | |||||| |||||||| |||| ||||    
T  44462165 cgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacatatgattaaattgaattgtgtcttttt 44462234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 44469698 - 44469767
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||| ||||| |||| |||||||||| ||||||||||| | |||||| |||||||| |||| ||||    
T  44469698 cgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacatatgattaaattgaattgtgtcttttt 44469767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 5307119 - 5307048
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgt 191  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||| | ||||   ||| |||||||||||||    
T  5307119 cgacaccgacacttatgatttcattgaattatgtcatttt-tcaaattattatcagtgtcgacgtgtccgtgt 5307048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 6960692 - 6960728
Alignment:
Q  135 gattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||||| |||||||||||||||||||||||||||    
T  6960692 gattacattaaattatgtcattttctcaaaattttat 6960728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 29447111 - 29447155
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||  |||||||||||||||| |||||||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaa 29447155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 10002163 - 10002202
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  10002163 cgacaccgacacatgtgattacattaaattatgtcatttt 10002202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 11246084 - 11246131
Alignment:
Q  124 ccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||||||  ||||||||| ||||||| ||||||||||||||||||    
T  11246084 ccgacacttgaaattacattgcattatgttattttctcaaaattttat 11246131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 24413544 - 24413607
Alignment:
Q  104 gacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatt 167  Q
    |||||| |||||||||||||| ||||||| | |||||  ||||||||||  |||||||||||||    
T  24413544 gacacgcatcgtgtccgacactgacacttataattaccctgaattatgtatttttctcaaaatt 24413607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 44067569 - 44067466
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgttcatgtatgtgtctg 224  Q
    |||||||| | |||||| || ||||||||||||||||||| | |||| | ||| | |||||| ||||| || | ||||||||||| | ||| |||||| |    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccg 44067470  T
Q  225 tgct 228  Q
    ||||    
T  44067469 tgct 44067466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 926760 - 926878
Alignment:
Q  91 tgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtg 190  Q
    |||||| ||||| ||||||| ||| ||||||||||||||||| | |||||| ||||  |||  ||||||||||| | |||    ||||| |||||| |||    
T  926760 tgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtg 926859  T
Q  191 tcagtatcgtgtctggtgt 209  Q
    || || ||||||| |||||    
T  926860 tccgtgtcgtgtccggtgt 926878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 2652391 - 2652346
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||    
T  2652391 cgacacttgtgattacatt-aattatgtcattttctaaaaaatttat 2652346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 29198494 - 29198524
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||||    
T  29198494 tgattacattgaattatgtcattttctcaaa 29198524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 1591340 - 1591311
Alignment:
Q  137 ttacattgaattatgtcattttctcaaaat 166  Q
    ||||||||||||||||||||||||||||||    
T  1591340 ttacattgaattatgtcattttctcaaaat 1591311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 14227263 - 14227214
Alignment:
Q  137 ttacattgaattatgtcattttctcaaaattttattcttgttgacgtgtc 186  Q
    |||||||||||||||| ||||||||||| | |||||  ||||||||||||    
T  14227263 ttacattgaattatgttattttctcaaattattattggtgttgacgtgtc 14227214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 165
Target Start/End: Original strand, 20658475 - 20658562
Alignment:
Q  74 acttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaa 165  Q
    |||||||||||||||||||||||  ||||| |||||| || |||   |||| ||| | |||||| |||| |||| |||||||||||||||||    
T  20658475 acttctgattgaaggcgtgtccc-atgtccaacacgtgtcctgt---acacagactcctgtgatcacatcgaatcatgtcattttctcaaaa 20658562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 22652035 - 22651990
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||| |||||||||||| ||||| |||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaa 22651990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 24613585 - 24613540
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||||||||||||| |||||| | |||||||| |||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttt 24613540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 24669492 - 24669447
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||||| |||||||||| |||| ||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaa 24669447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 25566900 - 25566855
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaa 25566855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 31681830 - 31681871
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  31681830 cgacaccgacacatgtgatttcattcaattatgtcattttct 31681871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 4298887 - 4298931
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||| |||||||| |||||||| ||||| |||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaa 4298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 10441245 - 10441217
Alignment:
Q  136 attacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||    
T  10441245 attacattgaattatgtcattttctcaaa 10441217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 16230105 - 16230165
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaaattttattcttgtt-gacgtgtccgtgtca 193  Q
    |||||| ||| |||||||||||||||| ||| | ||||| ||||| |||||||||||||||    
T  16230105 tgattatattaaattatgtcattttctaaaattattattgttgttagacgtgtccgtgtca 16230165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 31586278 - 31586322
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||    
T  31586278 gacaccgacacgtgtgattacattatattatatcattttctcaaa 31586322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 34201063 - 34201091
Alignment:
Q  136 attacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||    
T  34201063 attacattgaattatgtcattttctcaaa 34201091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 34834869 - 34834965
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattt 157  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||| |||||  |||||||||||| ||| ||||||| |||||||||||||||||    
T  34834869 tctgttgcacggacacttctgattgaaggcgtgtcccggtgtccgacatgtatcaagtccgacaccgatactcgtgatta-attgaattatgtcattt 34834965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 14338454 - 14338535
Alignment:
Q  90 gtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||| |||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  14338454 gtgtcccggtgtccgatacgtgtcgtgtctgacaccgacatttgtgattacattgaattatgtcattttttcaaaattttat 14338535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 10955044 - 10954966
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  10955044 aggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaa 10954966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 20503557 - 20503479
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| |||| || |||||||| |||||||||||||| |||||| |||||||||||||||| |||||    
T  20503557 aggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaa 20503479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 6984865 - 6984770
Alignment:
Q  76 ttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatt 172  Q
    |||||||||||| ||| |||| |||||  |||| | | ||||||||||||||| |||||||||| |||||||| ||| |||||||||||||||||||    
T  6984865 ttctgattgaagtcgtatccccgtgtct-acacttgttgtgtccgacaccgactcttgtgattatattgaattgtgttattttctcaaaattttatt 6984770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 49179715 - 49179767
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  49179715 cgacaccgacacttgtgattacatcgaattatgtcactttctcaaaattttat 49179767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 35223028 - 35222950
Alignment:
Q  88 gcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaat 166  Q
    ||||||||| ||||| ||||||| || |||||||||||||||| | | ||||||||||||||||| ||||||| |||||    
T  35223028 gcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattttctaaaaat 35222950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 55401167 - 55401089
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| | ||||| ||||||| ||||||||||||||||||||||| |||||| | |||||||| ||||| |||||    
T  55401167 aggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaa 55401089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 28918095 - 28918015
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtcc--gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||||| ||||||||  ||||||||||||||| |||||| |||||||||| ||||| |||||    
T  28918095 aggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaa 28918015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 23271982 - 23272039
Alignment:
Q  107 acgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||| |||||||||| | |||||||||| |||||||||| |||||||||    
T  23271982 acgtatcgtgtccaacaccgacacatatgattacattcaattatgtcagtttctcaaa 23272039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 44427900 - 44427855
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||    
T  44427900 cgacaccgacacatgtgattacattggattatgtcattttctcaaa 44427855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 40993302 - 40993374
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||| ||||| |||| || ||||||||||||||||||| | | |||||| |||||||||| |||||    
T  40993302 aggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 24205008 - 24205150
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatc-gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtg 184  Q
    ||||||||||  ||||| ||||||  || ||||||||||| ||||||| | |||||| || ||||||||||||||||||| | |||| | ||| | ||||    
T  24205008 aggcgtgtcctggtgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtg 24205106  T
Q  185 tccgtgtcagtatcgtgtctggtgttcatgtatgtgtctgtgct 228  Q
    || ||||| || ||||||| ||||| | ||| |||||| |||||    
T  24205107 tcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgct 24205150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 20691383 - 20691333
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttctcaaa 20691333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 27858404 - 27858354
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||| | |||||||||||| ||||| ||||||||||||||    
T  27858404 gtgtccgacaccgacgcctgtgattacattcaattaggtcattttctcaaa 27858354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 13845491 - 13845576
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttta 170  Q
    |||||||||| | ||||| ||||||| ||||||||||||||||||| | | |||||| || ||| ||| ||||||| |||| ||||    
T  13845491 aaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaattta 13845576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 40150567 - 40150616
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| ||||||||||| | ||||||||||||||||| |||||||||||||    
T  40150567 tgtcagacaccgacacatatgattacattgaattatatcattttctcaaa 40150616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 7171593 - 7171529
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattat 150  Q
    ||||||||| | ||||| ||||||| |||||||||||||| |||||||| ||||||  |||||||    
T  7171593 aggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattat 7171529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 15864304 - 15864252
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||| |||||  |||||| ||||||||||||||||||||||||| |||||    
T  15864304 cgacaccaacactaatgattatattgaattatgtcattttctcaaaactttat 15864252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 41319327 - 41319383
Alignment:
Q  136 attacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtc 192  Q
    ||||||||||||||||||||||| ||||| | |||||  ||| ||||||||||||||    
T  41319327 attacattgaattatgtcattttttcaaattattattggtgtcgacgtgtccgtgtc 41319383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 8383322 - 8383271
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||| | |||||| |||||||| | |||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaa 8383271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 25775574 - 25775535
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  25775574 cgtgtccgacaccgacacttgtaattacactgaattatgt 25775535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 42076751 - 42076801
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||| ||||||||||||||||||||| ||||||||| || ||||||||    
T  42076751 gacaccga-acttgtgattacattgaattaggtcattttcccacaattttat 42076801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 52558141 - 52558180
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  52558141 tgtgattacattgaattatgtccttttctcaaatttttat 52558180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 1502638 - 1502592
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    |||||| |||| ||||| |||||||||||| ||||||||||||||||    
T  1502638 gtgtccaacacagacacatgtgattacattcaattatgtcattttct 1502592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 9210832 - 9210870
Alignment:
Q  126 gacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  9210832 gacacatgtgattccattgaattatgtcattttctcaaa 9210870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 21149131 - 21149081
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||| |||||  | |||||||| ||||||||||||||||||||||    
T  21149131 gtgtccgacaacgacatctttgattacactgaattatgtcattttctcaaa 21149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 34409355 - 34409409
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtc 186  Q
    |||||||||||||||||||||||||||||| || | ||||   ||||||||||||    
T  34409355 tgtgattacattgaattatgtcattttctcgaagtattatcggtgttgacgtgtc 34409409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 51206348 - 51206398
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||  ||||| |||||||||| ||||| |||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaa 51206398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 4990967 - 4991012
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| ||||||||||| |||||| |||||||||| |||||||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatgtaattttctcaaa 4991012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 8587017 - 8587066
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||| |||||| | |||||||| ||||| |||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaa 8587066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 8789515 - 8789595
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtat--cgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| | |||||||||| || |  |||||||||||||||||| | | ||||||  ||||||||| |||||||||||    
T  8789515 aggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaa 8789595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 16000010 - 16000055
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||||||||||||||  ||||| |||||||||| |||||    
T  16000010 cgtgtccgacaccgacacttgtagttacactgaattatgttatttt 16000055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 25652050 - 25652123
Alignment:
Q  138 tacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgttc 211  Q
    |||| |||||||| ||||||||||||| | |||| | ||||| |||||  ||||| || |||||||||||||||    
T  25652050 tacactgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctggtgttc 25652123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 49651786 - 49651831
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaa 49651831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 3865748 - 3865700
Alignment:
Q  104 gacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    ||||||| ||||||| ||||||||||||||| |||| | ||||||||||    
T  3865748 gacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgt 3865700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 4946199 - 4946251
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaat 166  Q
    |||||| |||| ||||| |||||||||||| |||||| ||||||||| |||||    
T  4946199 gtgtccaacacagacacatgtgattacattcaattatatcattttcttaaaat 4946251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 4987247 - 4987291
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| |||||||| ||||||||||    
T  4987247 aggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 8593200 - 8593148
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatt 167  Q
    |||||||||||||||||||| |||| | |||||||||| ||||| || |||||    
T  8593200 tgtccgacaccgacacttgtaattatactgaattatgtgattttttccaaatt 8593148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 14832202 - 14832158
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| |||||||||| ||||||||    
T  14832202 aggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacac 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 18268007 - 18268095
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    |||||||||| ||||||||| || |||||  ||||||||||||| | ||||   ||||||| |||| || |||||||||| || |||||    
T  18268007 acaccgacacatgtgattacgttcaattaattcattttctcaaattattatcagtgttgacatgtcagtttcagtatcgtatccggtgt 18268095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 40017386 - 40017414
Alignment:
Q  136 attacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||    
T  40017386 attacattgaattatgtcattttctcaaa 40017414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 40697857 - 40697901
Alignment:
Q  118 ccgacaccgacacttgtgattacattgaattatgtcattttctca 162  Q
    ||||||||||||| | || ||| ||||||||||||||||||||||    
T  40697857 ccgacaccgacacatatggttagattgaattatgtcattttctca 40697901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 41961606 - 41961650
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| |||||||||| ||||||||    
T  41961606 aggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 54690304 - 54690376
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacactt 132  Q
    |||||||||| || |||| |||| ||||||| ||||| |||| | ||| || | |||||||||||||||||||    
T  54690304 tctgttgcaccaaaacttttgatcgaaggcgcgtcccagtgtgcaacatgtgttgtgtccgacaccgacactt 54690376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 9061 - 8955
Alignment:
Q  63 gttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctca 162  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||  |     |  ||||||||||||||||||||| |||||||||||||||||||||    
T  9061 gttgcacagacacttctgattgaaggcgtgtcccggtgtccgacacacacgacat--gacaccgacacttgtgattacgttgaattatgtcattttctca 8964  T
Q  163 aaattttat 171  Q
    |||||||||    
T  8963 aaattttat 8955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 30080503 - 30080591
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||   ||| ||| | ||||||||| | |||||||||||||    
T  30080503 acaccgatacttgtgattacattgaattatgtcattttctcaaaattttatcagtgtcgacatttccgtgtcattgtcgtgtctggtgt 30080591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 19167571 - 19167667
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtca-ttttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgt 209  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||   |||  ||||||| |||||||| |||||||||||||    
T  19167571 gtgtctgacaccgacacttgtgattacattgaattgtgtcatttttttcaaaattttatcggtgtcaacgtgtctgtgtcagtgtcgtgtctggtgt 19167667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 10010617 - 10010543
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgt 189  Q
    ||||| |||||||||| |||||||||| |||||||||||||||| |||||||||||||  |||||| ||||||||    
T  10010617 tgtcccacaccgacacatgtgattacaatgaattatgtcattttttcaaaattttattagtgttgaggtgtccgt 10010543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 21576712 - 21576790
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||||| |||||||||||| |||||||||| |||||| |||||||||| ||||| |||||    
T  21576712 aggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaa 21576790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 7621171 - 7621311
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccga-----caccgacacttgtgattacattgaattatgtca 154  Q
    ||||||||||| |||||||||||||||| |||||||   ||||||| | |||||||||| ||     |||||| ||||||||||||||| ||||||||||    
T  7621171 tctgttgcacggacacttctgattgaagacgtgtcctgatgtccgataagtatcgtgtctgatatgacaccgatacttgtgattacattaaattatgtca 7621270  T
Q  155 ttttctcaaaattttattcttgttgacgtgtccgtgtcagt 195  Q
     ||| |  |||||||||   ||| ||||||||| |||||||    
T  7621271 atttttttaaattttatctgtgtcgacgtgtccatgtcagt 7621311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 21191023 - 21191101
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| | ||| ||||||| | ||||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  21191023 aggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 21191101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 27932327 - 27932249
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||  ||||||||||||| |||||||||||||| | | |||| |||||| |||||||||| |||||||||||    
T  27932327 aggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaa 27932249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 16207586 - 16207641
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatttt 169  Q
    ||||| |||||| |||||||||||||||||||||||||||| |||||| |||||||    
T  16207586 gtgtctgacaccaacacttgtgattacattgaattatgtcaatttctctaaatttt 16207641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 21319946 - 21319997
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  21319946 gacatcgacacttgtgattacattgaattatatcattttttcaaaattttat 21319997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 11084395 - 11084325
Alignment:
Q  82 ttgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    ||||||||||||||| |||| ||||| || |||||||| ||||||||||| |||| ||| |||||||||||    
T  11084395 ttgaaggcgtgtcccggtgttcgacatgtgtcgtgtccaacaccgacactagtgactacgttgaattatgt 11084325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 32444825 - 32444752
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtc 192  Q
    |||||||||||| | |||||||||||||||||||||| |||||||| | ||| |  |||||||||||| |||||    
T  32444825 cgacaccgacacatttgattacattgaattatgtcatcttctcaaattgttaatggtgttgacgtgtcagtgtc 32444752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 8420089 - 8420041
Alignment:
Q  116 gtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaa 8420041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 42192322 - 42192282
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaaattttatt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  42192322 tgtgattacattgaattatgtcattgtctcaaaattttatt 42192282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 2548451 - 2548404
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctc 161  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  2548451 gtgtccgacaccgacacttatgattacactgaattatgtaattttctc 2548404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 6247687 - 6247636
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 6247636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 31084420 - 31084337
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacac-----cgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| |||||| ||||| ||||||| |||||||||||||     |||||||||| ||||||||||||||||| ||||| |||||    
T  31084420 aggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaa 31084337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 10009884 - 10009842
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctca 162  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  10009884 gacaacgacacatgtgattacattgaattatgtcattttctca 10009842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 15884054 - 15884008
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||    
T  15884054 tcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 26205766 - 26205812
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||    
T  26205766 cgacacctatgattacactgaattatgtcattttctcaaaattttat 26205812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 30502355 - 30502433
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| |||||| ||||| |||| || ||||||||||||||||||| | | |||||| ||||||| || |||||||||||    
T  30502355 aggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaa 30502433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 30542698 - 30542776
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| |||||| ||||| |||| || ||||||||||||||||||| | | |||||| ||||||| || |||||||||||    
T  30542698 aggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaa 30542776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 42893452 - 42893374
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||  ||||| ||||||| | ||||| ||||||||||||||| |||||| || ||||||| ||||| |||||    
T  42893452 aggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaa 42893374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 24906297 - 24906346
Alignment:
Q  115 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| |||||||||||| |||||| |||||||||||||||| |||||    
T  24906297 tgtccgataccgacacttgtaattacactgaattatgtcattttttcaaa 24906346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 38784858 - 38784813
Alignment:
Q  126 gacacttgtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  38784858 gacacttgtgattacattgaattatatcattttttcacaattttat 38784813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 15294991 - 15294943
Alignment:
Q  118 ccgacaccgacacttgtgattacattgaattatgtcattttctcaaaat 166  Q
    |||| |||| ||||||||||||| ||||||||||||||||| |||||||    
T  15294991 ccgaaaccggcacttgtgattaccttgaattatgtcattttttcaaaat 15294943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 28588667 - 28588719
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||| | | |||||| |||||||||| |||||||||||    
T  28588667 tcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaa 28588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 43564973 - 43564901
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||| | |||||||| |||||    
T  43564973 aggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 43564901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 95
Target Start/End: Original strand, 9031879 - 9031914
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtcc 95  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9031879 tctgttgcacggacacttctgattgaaggcgtgtcc 9031914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 11596448 - 11596500
Alignment:
Q  110 tatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||| |||||||| | ||  |||||||||||||||||||||||||||||    
T  11596448 tatcgtgtccaacaccgacgcatg--attacattgaattatgtcattttctcaaa 11596500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 21542132 - 21542089
Alignment:
Q  87 ggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    |||||||||| ||||| ||||||| |||||||||||||||||||    
T  21542132 ggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 31264491 - 31264452
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaa 31264452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 4445204 - 4445154
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||||||||| |||| ||||  ||||||||| ||||    
T  4445204 gtgtccgacaccgacacttgtgattgcattaaatttggtcattttcacaaa 4445154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 6326292 - 6326342
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| | ||||||||| |||||| |||||||||| |||||||||||    
T  6326292 gtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaa 6326342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 26312849 - 26312783
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| |||||||||||||||||||||||| || | | |||||| |||||||  | |||||||||||    
T  26312849 gtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaa 26312783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 30099004 - 30099070
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatg 151  Q
    |||||||||||| ||||| ||||||| |||| |||||||||||||| | | ||||||  ||||||||    
T  30099004 aaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatg 30099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 43208289 - 43208319
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||||    
T  43208289 tgattacattgaattatgtcattttctcaaa 43208319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 9031925 - 9031977
Alignment:
Q  121 acaccgacactt--gtgattacattgaattatgtcattttctcaaaattttat 171  Q
    ||||||||||||  ||||||| ||||||||||||||||| ||||||| |||||    
T  9031925 acaccgacacttttgtgattagattgaattatgtcatttcctcaaaaatttat 9031977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 21814365 - 21814320
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    |||||||||||| ||| | ||||||| |||||||||||||||||||    
T  21814365 aaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 23012380 - 23012453
Alignment:
Q  91 tgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||| ||||| |||| || |||||||| |||||||||| | | |||||||| |||||| | |||||||||||    
T  23012380 tgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaa 23012453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 28296387 - 28296342
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| |||| | ||| |||||||||||||||||||||||||||    
T  28296387 cgacaccaacacatatgagtacattgaattatgtcattttctcaaa 28296342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 32630715 - 32630780
Alignment:
Q  99 tgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| ||||||| |||| |||||||| ||||| | | ||||||||||||||| | |||||||||||    
T  32630715 tgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaa 32630780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 41558654 - 41558699
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||| ||||| | | |||||||||||||||||||||||||||||    
T  41558654 cgacactgacacatttaattacattgaattatgtcattttctcaaa 41558699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 21522853 - 21522809
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||| | ||||||| |||||||||||||||||||    
T  21522853 aggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 21533419 - 21533375
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||| | ||||||| |||||||||||||||||||    
T  21533419 aggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 33178089 - 33178045
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||||||||||||| |||||| | |||||||| |||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttt 33178045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 42029818 - 42029770
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    |||||||||||||||| || | | ||||||||||||||||| |||||||    
T  42029818 tcgtgtccgacaccgatacatataattacattgaattatgtgattttct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 8643 - 8749
Alignment:
Q  60 tctgttgcacgaacacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtc-cgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| |||||      || | ||||| | ||||||||| ||||||||||| ||||||||||    
T  8643 tctgttgcacggacacttctgattgaaggcatgtcccggtgtctgacac------tgacacgacaaccacacttgtggttacattgaatcatgtcatttt 8736  T
Q  159 ctcaaaattttat 171  Q
    |||||||||||||    
T  8737 ctcaaaattttat 8749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 17893949 - 17893853
Alignment:
Q  95 cctgtgtcc-gacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtg 190  Q
    ||||||||| |||||||||||||| |||||||||||| |||||| | ||| |||||| ||||||||| |||||||||| | ||| || |||||||||    
T  17893949 cctgtgtccagacacgtatcgtgtacgacaccgacacgtgtgataatattaaattatatcattttcttaaaattttatacgtgtcgaagtgtccgtg 17893853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 18337421 - 18337343
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| |||||| ||||| ||||||| | ||||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  18337421 aggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 18337343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 1815349 - 1815277
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||| ||||| |||| || ||||||| ||||||||||||||| |||||| |||||||||| |||||    
T  1815349 aggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgatttt 1815277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 19637854 - 19637786
Alignment:
Q  92 gtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    ||||| ||||| || | |||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  19637854 gtcccggtgtcggatatgtatcgtgtccgacaccgacacatatgattacattgaataatgtcattttct 19637786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 38078654 - 38078706
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  38078654 tcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaa 38078706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 51410117 - 51410045
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||| | ||||| || |||| ||||||||||||||||||||||| |||||| |||||||||| |||||    
T  51410117 aggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 51410045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 3921711 - 3921656
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgt 189  Q
    ||||||||||||||||||||||||||||||| | |||||  |||||||||||||||    
T  3921711 tgattacattgaattatgtcattttctcaaattattattgatgttgacgtgtccgt 3921656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 40176662 - 40176595
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtc 186  Q
    |||||| ||||| |||||||||||||||| | |||||||||||||||||||||   ||||||||||||    
T  40176662 cgacactgacacatgtgattacattgaatgaagtcattttctcaaaattttatcggtgttgacgtgtc 40176595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 40258900 - 40258978
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||  ||||| |||| || ||||||| ||||||||||||||| |||||| |||||||||| ||||| |||||    
T  40258900 aggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaa 40258978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 40686762 - 40686832
Alignment:
Q  123 accgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtca 193  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||||||||   ||| |||||||| ||||||    
T  40686762 accgacacttatgattacattgaattatatcattttatcaaaattttatcgatgtcgacgtgtcagtgtca 40686832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 46348350 - 46348428
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| | ||||| ||||||| ||||||||||||||||||||||| |||||| | |||||| | ||||| |||||    
T  46348350 aggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaa 46348428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 7988439 - 7988492
Alignment:
Q  107 acgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||||| |||||    
T  7988439 acgtattgtgtccgacaccaacacttatgattacattgaattatgtcactttct 7988492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 18946042 - 18946083
Alignment:
Q  127 acacttgtgattacattgaattatgtcattttctcaaaattt 168  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  18946042 acactcgtgattacattgaattatgtcattttctcaaaattt 18946083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 24462270 - 24462319
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattt 168  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||||    
T  24462270 cgacactgaaacttgtgattacattgaattatgtcattttttcaaaattt 24462319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 50195459 - 50195504
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  50195459 cgtgtccgacaccgacacatgtgattacattcaattatgtcatttt 50195504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 24806981 - 24806933
Alignment:
Q  142 ttgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtg 190  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  24806981 ttgaattatgttattttctcaaaattttatccatgttgacgtgtccgtg 24806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 28170439 - 28170388
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatt 172  Q
    ||||| ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  28170439 gacactgacacttgttattacattgaattatgtcatttt-tcaaaattttatt 28170388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 31667487 - 31667443
Alignment:
Q  116 gtccgacaccgacacttgtgattacattgaattatgtcattttct 160  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  31667487 gtccgacaccgacacatgtgattacatttaattatgtcattttct 31667443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 43966880 - 43966816
Alignment:
Q  104 gacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattt 168  Q
    ||||||| | || ||||||||| |||| ||||||||||||||||| | |||||||||||||||||    
T  43966880 gacacgtgtagtatccgacaccaacacatgtgattacattgaattgtatcattttctcaaaattt 43966816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 14332465 - 14332422
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  14332465 acaccgacatatgtgattacattgaattatgtcattttctcaaa 14332422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 41877464 - 41877515
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||| |||||| | |||||||| |||||||||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaa 41877515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 46748910 - 46748997
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtg 208  Q
    |||| |||| |||||||||||||||| |||||| |||| ||||||||||| |  ||| | ||||||||||||||| || ||| |||||    
T  46748910 acactgacatttgtgattacattgaactatgtcgttttttcaaaattttaatggtgtcggcgtgtccgtgtcagtgtcatgtgtggtg 46748997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 17007954 - 17008000
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||    
T  17007954 tcgtgtccgacactgacacttgtgattatattgaattatgtaatttt 17008000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 22515854 - 22515932
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| | ||||| || | || ||||||||||||||||||||||| |||||| | |||||||| ||||| |||||    
T  22515854 aggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaa 22515932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 24176873 - 24176811
Alignment:
Q  125 cgacacttgtgattacattgaattatgtca-ttttctcaaaattttattcttgttgacgtgtc 186  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||   ||||||||||||    
T  24176873 cgacacttgtgattacattaaatcatgtcatttttctcaaaattttatcggtgttgacgtgtc 24176811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 29163351 - 29163421
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttc 159  Q
    |||||||| ||||| | ||||| ||||||||||||||||||| | | |||| |||||||||||| ||||||    
T  29163351 cgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttc 29163421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 37598923 - 37598861
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaatt 148  Q
    |||||||||||  |||| ||||||| ||||||||||||||||||||| | |||||| ||||||    
T  37598923 aggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt 37598861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 40181963 - 40181885
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||  ||||||| | |||||||||||||| || | | |||||| |||||||||| |||||||||||    
T  40181963 aggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaa 40181885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 42359416 - 42359494
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| |||||   || |||||||||||||||||||| |||||| |||||| ||| ||||| |||||    
T  42359416 aggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaa 42359494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 7888155 - 7888106
Alignment:
Q  118 ccgacaccgacacttgtgattacattgaattatgtcattttctcaaaatt 167  Q
    |||||||||||||||||||||||||| |||||||  | ||||||||||||    
T  7888155 ccgacaccgacacttgtgattacattaaattatgcgagtttctcaaaatt 7888106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 11412763 - 11412811
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctca 162  Q
    |||||| |||||||||| | |||| ||||||||||||||||||||||||    
T  11412763 gtgtccaacaccgacacctatgatcacattgaattatgtcattttctca 11412811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 22881609 - 22881661
Alignment:
Q  112 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||||||||| |||||| | |||||||| ||||| |||||    
T  22881609 tcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaa 22881661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 32461420 - 32461464
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||    
T  32461420 aggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 1486671 - 1486754
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtc-----cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| ||||| ||||||| |||||||     |||||||||||||| | |||||| |||||||||| ||||| |||||    
T  1486671 aggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaa 1486754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 11571628 - 11571585
Alignment:
Q  135 gattacattgaattatgtcattttctcaaaattttattcttgtt 178  Q
    |||||||||||||||||||||||||||||| | |||| ||||||    
T  11571628 gattacattgaattatgtcattttctcaaattattatccttgtt 11571585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 152
Target Start/End: Original strand, 19058850 - 19058889
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  19058850 cgtgtccgacaccgacacttgtaattacactgaattatgt 19058889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 26390133 - 26390172
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  26390133 cgacactgacacttgtgattacattcaattatgtcatttt 26390172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 34184720 - 34184673
Alignment:
Q  126 gacacttgtgattacattgaattatgtcattttctcaaaattttattc 173  Q
    ||||| ||||||||||||||||||| | |||||||||| |||||||||    
T  34184720 gacacatgtgattacattgaattatattattttctcaagattttattc 34184673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 24334699 - 24334737
Alignment:
Q  113 cgtgtccgacaccgacacttgtgattacattgaattatg 151  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  24334699 cgtgtccgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 36878541 - 36878475
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| |||| || ||||||| ||||||||||| | | |||||| |||||||||| |||||||||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaa 36878475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 50233445 - 50233411
Alignment:
Q  134 tgattacattgaattatgtcattttctcaaaattt 168  Q
    ||||||||||||||||||||||||||| |||||||    
T  50233445 tgattacattgaattatgtcattttcttaaaattt 50233411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 6612171 - 6612216
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaa 6612216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 8203872 - 8203835
Alignment:
Q  127 acacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  8203872 acacttgtgattacattcacttatgtcattttctcaaa 8203835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 18951002 - 18950925
Alignment:
Q  124 ccgacacttgtgattacattgaattatgtca-ttttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgt 200  Q
    ||||||| || ||||||| |||||||||||| |||||| |||||| |||   | ||| ||||||||||||||||||||    
T  18951002 ccgacacctgcgattacactgaattatgtcatttttcttaaaattgtatcggtattgtcgtgtccgtgtcagtatcgt 18950925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 24577186 - 24577231
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaa 24577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 25934720 - 25934675
Alignment:
Q  85 aaggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||| |||| ||||| ||||||| |||||||||||||||||||    
T  25934720 aaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 40317810 - 40317867
Alignment:
Q  114 gtgtccgacaccga-cacttgtgattacattgaattatgtcattttctcaaaatttta 170  Q
    |||||||||||| | ||| || ||||| ||||||||||| ||||||||||||||||||    
T  40317810 gtgtccgacacccagcacatgcgattatattgaattatgccattttctcaaaatttta 40317867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 2445928 - 2445884
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||| |||||| | |||||| ||||||||||||||||||||||||    
T  2445928 gacatcgacacatatgattaaattgaattatgtcattttctcaaa 2445884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 12919034 - 12918958
Alignment:
Q  89 cgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaa 165  Q
    |||||||| ||||| ||||||| |||||||||| ||| |||| | | || |||||||||||||| ||| ||| ||||    
T  12919034 cgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgattgtctaaaaa 12918958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 14613061 - 14613113
Alignment:
Q  72 acacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacac 124  Q
    ||||||||||||||||||||||| | || |||||||  | |||||||||||||    
T  14613061 acacttctgattgaaggcgtgtctccgtatccgacatatgtcgtgtccgacac 14613113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 31015097 - 31015057
Alignment:
Q  124 ccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||| |||||| |||||||||| |||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaa 31015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 33202995 - 33202923
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||| | ||||| || | |||||||||| |||||| | || | |||||||||||| ||||||||||||    
T  33202995 aggcgtgtcacggtgtcggatatgtatcgtgtctgacaccaaaacatatgattacattgatttatgtcatttt 33202923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 40747790 - 40747818
Alignment:
Q  136 attacattgaattatgtcattttctcaaa 164  Q
    |||||||||||||||||||||||||||||    
T  40747790 attacattgaattatgtcattttctcaaa 40747818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 40917852 - 40917808
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| |||||||| ||||||||||    
T  40917852 aggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 47989556 - 47989469
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggt 207  Q
    |||||||||||||||| |||||| |||||||||| ||||| | ||| | |||||  ||| | |||||| ||||| || |||||||||||    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattattatt-gtgtcggcgtgtcagtgtctgtgtcgtgtctggt 47989469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 18110 - 18181
Alignment:
Q  121 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtc 192  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||||||||   ||| |||||||| |||||    
T  18110 acaccaacacttgcgattacattgaattatgttattttctcaaaattttatcggtgtcgacgtgtcagtgtc 18181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 433 - 507
Alignment:
Q  90 gtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| ||||| ||||||  ||||||||||||||||||||||| |||||| |||||| ||| ||||| |||||    
T  433 gtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaa 507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 45509 - 45563
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 152  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  45509 gtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 70358 - 70292
Alignment:
Q  98 gtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||||| ||||||||||||||||||||| | |||||| |||||||||| ||||| |||||    
T  70358 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaa 70292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 8890 - 8835
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattaca 141  Q
    ||||||||| | ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  8890 aggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 8835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 14619 - 14544
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||| | ||||| ||||||| |||||||||||||   ||||||| |||||| |||||||||| ||||| |||||    
T  14619 aggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgtgattttttcaaa 14544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 4848 - 4922
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtcc--gacaccgacacttgtgattacattgaattatgtcatttt 158  Q
    ||||||||||||||||| |||| || |||||| |  |||||| |||||||| |||||| |||||||||| |||||    
T  4848 aggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatttt 4922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 5016 - 5058
Alignment:
Q  99 tgtccgacacgtatcgtgtccgacaccgacacttgtgattaca 141  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||    
T  5016 tgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 63837 - 63787
Alignment:
Q  114 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||| ||||||||||||||| ||| || |||||||||| |||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaa 63787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 56981 - 56936
Alignment:
Q  119 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 164  Q
    |||||| ||||||| |||||||| |||||||| |||||||||||||    
T  56981 cgacactgacacttatgattacactgaattatatcattttctcaaa 56936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 10260 - 10313
Alignment:
Q  72 acacttctgattgaaggcgtgtccctgtgtccgacacgtatcgtgtccgacacc 125  Q
    ||||||||||||||||| ||||||   ||||||||||| |||| ||||||||||    
T  10260 acacttctgattgaaggtgtgtcctgctgtccgacacgcatcgcgtccgacacc 10313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 51888 - 51825
Alignment:
Q  104 gacacgtatcgtgtccgacaccg---acacttgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||||||||||| |||||||   |||||||| |||||| |||||||||| ||||| |||||    
T  51888 gacacgtatcgtgtctgacaccgacaacacttgtaattacactgaattatgtgattttttcaaa 51825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 240022 - 240095
Alignment:
Q  120 gacaccgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtca 193  Q
    ||||||||||| | ||||||||||||||||| | ||||||||||| | ||||  ||||  || |||||||||||    
T  240022 gacaccgacacatatgattacattgaattatattattttctcaaattattatagttgtcaacatgtccgtgtca 240095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 225274 - 225371
Alignment:
Q  125 cgacacttgtgattacattgaattatgtcattttctcaaaattttattcttgttgacgtgtccgtgtcagtatcgtgtctggtgttcatgtatgtgtc 222  Q
    |||||||| | ||||||||| ||||||||||||||||||| | ||||   ||| | |||||| ||||| || ||||||| ||||| | ||| ||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtc 225371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 7736 - 7704
Alignment:
Q  132 tgtgattacattgaattatgtcattttctcaaa 164  Q
    ||||||| |||||||||||||||||||||||||    
T  7736 tgtgattgcattgaattatgtcattttctcaaa 7704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 8591 - 8635
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    |||||||| || ||||| |||||||||||||||||| ||||||||    
T  8591 aggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 241697 - 241653
Alignment:
Q  86 aggcgtgtccctgtgtccgacacgtatcgtgtccgacaccgacac 130  Q
    ||||||||||| ||||| ||||||| |||||||||||||| ||||    
T  241697 aggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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