View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1331_low_1 (Length: 1435)

Name: NF1331_low_1
Description: NF1331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1331_low_1
NF1331_low_1
[»] chr3 (109 HSPs)
chr3 (96-676)||(24369193-24369798)
chr3 (756-1105)||(24368826-24369170)
chr3 (1217-1398)||(52491891-52492076)
chr3 (1214-1398)||(44686252-44686444)
chr3 (1218-1398)||(45242067-45242256)
chr3 (104-320)||(24344287-24344503)
chr3 (122-330)||(24354549-24354757)
chr3 (96-330)||(24364849-24365083)
chr3 (1217-1398)||(45242845-45243035)
chr3 (96-316)||(24351478-24351698)
chr3 (96-323)||(24358219-24358445)
chr3 (1215-1398)||(36750296-36750487)
chr3 (1252-1398)||(3971036-3971182)
chr3 (1252-1398)||(41756290-41756436)
chr3 (1218-1398)||(38922744-38922933)
chr3 (1217-1397)||(38923524-38923713)
chr3 (1252-1398)||(3998699-3998845)
chr3 (96-316)||(24313727-24313948)
chr3 (137-326)||(24361906-24362095)
chr3 (1215-1398)||(41755497-41755689)
chr3 (1216-1398)||(44687021-44687212)
chr3 (1252-1398)||(3997972-3998115)
chr3 (1252-1398)||(3971763-3971906)
chr3 (1216-1371)||(32490080-32490244)
chr3 (1102-1216)||(24368643-24368756)
chr3 (1217-1371)||(19132697-19132860)
chr3 (1217-1320)||(19132563-19132675)
chr3 (500-582)||(24357916-24357998)
chr3 (488-582)||(24365316-24365410)
chr3 (1217-1314)||(32489946-32490052)
chr3 (1222-1320)||(36750050-36750157)
chr3 (1216-1320)||(52492215-52492328)
chr3 (358-435)||(24358061-24358138)
chr3 (503-582)||(24354365-24354444)
chr3 (369-435)||(24365190-24365256)
chr3 (686-814)||(10841703-10841831)
chr3 (685-816)||(611587-611717)
chr3 (1252-1363)||(45500517-45500626)
chr3 (678-807)||(611595-611723)
chr3 (686-774)||(2128408-2128495)
chr3 (686-788)||(22496957-22497059)
chr3 (488-582)||(24351031-24351125)
chr3 (682-816)||(36571377-36571510)
chr3 (500-557)||(24313105-24313162)
chr3 (681-821)||(36344372-36344513)
chr3 (722-806)||(1086551-1086635)
chr3 (694-813)||(1086516-1086635)
chr3 (684-807)||(4190633-4190755)
chr3 (681-788)||(12744933-12745040)
chr3 (694-788)||(4980287-4980381)
chr3 (691-807)||(8256840-8256953)
chr3 (500-582)||(24361665-24361747)
chr3 (684-818)||(36571377-36571510)
chr3 (695-788)||(4980305-4980398)
chr3 (765-818)||(29015347-29015400)
chr3 (687-748)||(39836937-39836998)
chr3 (681-806)||(40470419-40470544)
chr3 (684-788)||(7981177-7981281)
chr3 (681-740)||(13900229-13900289)
chr3 (675-739)||(29015340-29015404)
chr3 (714-789)||(4181965-4182040)
chr3 (685-788)||(7981150-7981253)
chr3 (681-788)||(24722688-24722795)
chr3 (686-745)||(42681186-42681245)
chr3 (691-741)||(22152726-22152776)
chr3 (686-748)||(39682615-39682677)
chr3 (721-807)||(39836907-39836992)
chr3 (685-754)||(42787621-42787690)
chr3 (687-788)||(3648731-3648832)
chr3 (685-826)||(21217160-21217301)
chr3 (769-822)||(24596889-24596942)
chr3 (684-749)||(40639780-40639845)
chr3 (684-816)||(105376-105507)
chr3 (711-791)||(4181960-4182040)
chr3 (723-807)||(21970514-21970597)
chr3 (723-807)||(21992950-21993033)
chr3 (682-742)||(24596893-24596953)
chr3 (712-788)||(26121571-26121647)
chr3 (712-788)||(26243711-26243787)
chr3 (712-788)||(26244412-26244488)
chr3 (712-788)||(27707210-27707286)
chr3 (694-746)||(29720223-29720275)
chr3 (1217-1249)||(31556232-31556264)
chr3 (712-788)||(31706645-31706721)
chr3 (1217-1249)||(38923438-38923470)
chr3 (684-788)||(42929010-42929114)
chr3 (693-749)||(44037053-44037109)
chr3 (1217-1249)||(45242309-45242341)
chr3 (684-816)||(54595794-54595925)
chr3 (684-788)||(54595794-54595898)
chr3 (1268-1319)||(8427276-8427326)
chr3 (687-789)||(4190660-4190761)
chr3 (684-746)||(10872746-10872808)
chr3 (684-818)||(12744905-12745039)
chr3 (712-788)||(26367503-26367583)
chr3 (682-748)||(29241552-29241618)
chr3 (684-746)||(29565183-29565245)
chr3 (682-748)||(40639867-40639933)
chr3 (689-807)||(41743599-41743717)
chr3 (706-748)||(43493818-43493860)
chr3 (716-810)||(44037018-44037112)
chr3 (764-806)||(45613532-45613574)
chr3 (681-818)||(334667-334804)
chr3 (398-435)||(24361778-24361815)
chr3 (702-735)||(25645210-25645243)
chr3 (681-742)||(32759044-32759105)
chr3 (706-747)||(46890400-46890441)
chr3 (730-823)||(50466810-50466902)
chr3 (682-743)||(50603590-50603651)
[»] chr7 (75 HSPs)
chr7 (1216-1398)||(38071897-38072088)
chr7 (1217-1398)||(668179-668369)
chr7 (1216-1398)||(37864165-37864356)
chr7 (1252-1398)||(668961-669107)
chr7 (1252-1398)||(7677461-7677607)
chr7 (1216-1398)||(4261456-4261645)
chr7 (1217-1366)||(17145622-17145781)
chr7 (1215-1320)||(38778852-38778966)
chr7 (1217-1320)||(17145808-17145920)
chr7 (1221-1320)||(4261209-4261317)
chr7 (1217-1320)||(38072227-38072339)
chr7 (1217-1320)||(38779500-38779611)
chr7 (685-799)||(37491278-37491392)
chr7 (681-806)||(18654560-18654685)
chr7 (1219-1310)||(7677755-7677855)
chr7 (684-807)||(18654550-18654673)
chr7 (689-816)||(38940224-38940350)
chr7 (686-807)||(30457737-30457857)
chr7 (684-808)||(43813129-43813253)
chr7 (685-807)||(12274814-12274936)
chr7 (1215-1304)||(41194511-41194608)
chr7 (684-813)||(8169104-8169232)
chr7 (685-807)||(27165178-27165304)
chr7 (1217-1285)||(37468976-37469053)
chr7 (711-807)||(8169128-8169223)
chr7 (684-793)||(10095723-10095832)
chr7 (684-817)||(11602772-11602904)
chr7 (683-748)||(11602839-11602904)
chr7 (684-788)||(14995869-14995973)
chr7 (686-807)||(37491286-37491407)
chr7 (699-807)||(21099263-21099370)
chr7 (684-747)||(785625-785688)
chr7 (689-784)||(2533949-2534044)
chr7 (686-789)||(21099275-21099377)
chr7 (681-747)||(2943213-2943279)
chr7 (685-807)||(21387581-21387703)
chr7 (684-818)||(23797350-23797484)
chr7 (681-807)||(28752092-28752218)
chr7 (714-816)||(43813129-43813231)
chr7 (684-805)||(9555275-9555396)
chr7 (686-743)||(10599069-10599126)
chr7 (686-823)||(18819937-18820074)
chr7 (687-748)||(30457802-30457863)
chr7 (684-777)||(31417560-31417653)
chr7 (684-741)||(34840618-34840675)
chr7 (1216-1249)||(37468909-37468942)
chr7 (684-816)||(9555264-9555396)
chr7 (684-748)||(12171314-12171378)
chr7 (693-789)||(30486615-30486711)
chr7 (684-748)||(34478307-34478371)
chr7 (684-748)||(36547658-36547722)
chr7 (1218-1249)||(668422-668453)
chr7 (684-807)||(12274822-12274945)
chr7 (681-816)||(23797349-23797484)
chr7 (686-813)||(24934557-24934684)
chr7 (684-747)||(25245216-25245279)
chr7 (687-778)||(27165172-27165263)
chr7 (712-787)||(27242447-27242522)
chr7 (684-791)||(38940224-38940330)
chr7 (684-742)||(1706837-1706895)
chr7 (684-734)||(10422894-10422944)
chr7 (682-748)||(25768691-25768757)
chr7 (686-748)||(25774254-25774316)
chr7 (684-734)||(26824910-26824960)
chr7 (693-807)||(30486597-30486711)
chr7 (713-807)||(31319549-31319643)
chr7 (706-791)||(5977860-5977945)
chr7 (719-748)||(6250639-6250668)
chr7 (730-807)||(11002366-11002443)
chr7 (684-788)||(19688131-19688236)
chr7 (691-748)||(21096198-21096255)
chr7 (712-809)||(30138820-30138917)
chr7 (687-748)||(31319588-31319649)
chr7 (1216-1249)||(37864091-37864124)
chr7 (684-741)||(46944016-46944073)
[»] chr6 (50 HSPs)
chr6 (1217-1398)||(33480486-33480676)
chr6 (1217-1398)||(15083176-15083366)
chr6 (1217-1398)||(22579935-22580125)
chr6 (1222-1398)||(15082402-15082587)
chr6 (1219-1398)||(33479698-33479887)
chr6 (1221-1398)||(22587168-22587354)
chr6 (1217-1371)||(33018167-33018330)
chr6 (1219-1371)||(3542816-3542977)
chr6 (1217-1320)||(3542999-3543111)
chr6 (1224-1342)||(33018330-33018457)
chr6 (1214-1320)||(7193514-7193629)
chr6 (1216-1371)||(7193337-7193492)
chr6 (1221-1315)||(22582420-22582523)
chr6 (712-788)||(7158288-7158364)
chr6 (687-788)||(8449581-8449684)
chr6 (687-788)||(8458385-8458488)
chr6 (685-799)||(14173395-14173509)
chr6 (681-807)||(14173403-14173528)
chr6 (685-799)||(14177931-14178045)
chr6 (681-807)||(14177939-14178064)
chr6 (681-807)||(16120966-16121092)
chr6 (691-735)||(24111184-24111228)
chr6 (686-748)||(18886314-18886376)
chr6 (684-785)||(15836574-15836675)
chr6 (681-742)||(32124202-32124263)
chr6 (681-749)||(17214196-17214264)
chr6 (1362-1398)||(22580682-22580718)
chr6 (687-818)||(16120967-16121098)
chr6 (684-788)||(15517122-15517226)
chr6 (687-744)||(15718469-15718526)
chr6 (685-806)||(17773506-17773627)
chr6 (728-813)||(24111148-24111232)
chr6 (1217-1249)||(15082640-15082672)
chr6 (1217-1249)||(22580597-22580629)
chr6 (1217-1249)||(22587083-22587115)
chr6 (684-744)||(31632183-31632243)
chr6 (1217-1249)||(33479940-33479972)
chr6 (684-788)||(34379767-34379871)
chr6 (681-748)||(4844290-4844357)
chr6 (687-746)||(6032973-6033032)
chr6 (689-816)||(13462937-13463063)
chr6 (682-737)||(15718015-15718070)
chr6 (685-748)||(30422338-30422401)
chr6 (684-746)||(13276490-13276552)
chr6 (711-744)||(7159914-7159947)
chr6 (722-791)||(7358889-7358958)
chr6 (684-744)||(18491736-18491797)
chr6 (687-744)||(26527266-26527323)
chr6 (685-806)||(28577606-28577727)
chr6 (765-818)||(32124209-32124262)
[»] chr5 (71 HSPs)
chr5 (1217-1398)||(15183875-15184065)
chr5 (1218-1398)||(687206-687395)
chr5 (1216-1398)||(33002674-33002865)
chr5 (1217-1398)||(686417-686606)
chr5 (1217-1398)||(15183088-15183279)
chr5 (1215-1355)||(8204118-8204267)
chr5 (1216-1371)||(8040194-8040358)
chr5 (687-816)||(1098635-1098763)
chr5 (1216-1320)||(12190094-12190207)
chr5 (1215-1320)||(36626566-36626680)
chr5 (1216-1320)||(8040380-8040493)
chr5 (681-789)||(2673848-2673956)
chr5 (684-807)||(1098641-1098763)
chr5 (685-816)||(7313836-7313966)
chr5 (1216-1310)||(33001931-33002034)
chr5 (711-816)||(13356168-13356273)
chr5 (685-814)||(13391536-13391665)
chr5 (684-816)||(13654513-13654644)
chr5 (684-807)||(7313844-7313966)
chr5 (684-807)||(25713712-25713834)
chr5 (682-788)||(4082740-4082846)
chr5 (686-807)||(13391544-13391665)
chr5 (684-789)||(25776935-25777040)
chr5 (684-816)||(13654513-13654644)
chr5 (686-816)||(25776909-25777040)
chr5 (694-788)||(25408575-25408669)
chr5 (687-741)||(36864501-36864555)
chr5 (712-813)||(1100064-1100165)
chr5 (685-778)||(17967357-17967450)
chr5 (687-807)||(3100412-3100532)
chr5 (684-807)||(25358062-25358183)
chr5 (681-749)||(36895307-36895375)
chr5 (681-748)||(27895898-27895965)
chr5 (712-799)||(32198881-32198968)
chr5 (693-748)||(36409651-36409706)
chr5 (709-791)||(2673876-2673958)
chr5 (682-788)||(3100437-3100543)
chr5 (684-734)||(40515231-40515281)
chr5 (681-742)||(553952-554012)
chr5 (706-791)||(19216312-19216397)
chr5 (687-816)||(25713706-25713834)
chr5 (684-745)||(25792921-25792982)
chr5 (685-742)||(43506172-43506229)
chr5 (1217-1249)||(686669-686701)
chr5 (688-744)||(4082814-4082870)
chr5 (708-792)||(12295704-12295788)
chr5 (684-788)||(25408547-25408651)
chr5 (1217-1249)||(39950404-39950436)
chr5 (1217-1249)||(39950448-39950480)
chr5 (684-792)||(42247556-42247664)
chr5 (685-745)||(43506112-43506172)
chr5 (684-806)||(11795750-11795872)
chr5 (706-789)||(19216317-19216400)
chr5 (712-807)||(20518203-20518298)
chr5 (684-807)||(25694128-25694251)
chr5 (684-806)||(25772158-25772281)
chr5 (685-748)||(33075137-33075200)
chr5 (1328-1371)||(36626501-36626544)
chr5 (691-738)||(38321961-38322008)
chr5 (694-780)||(1180714-1180800)
chr5 (706-792)||(6279436-6279522)
chr5 (768-814)||(7613446-7613492)
chr5 (684-742)||(18261604-18261662)
chr5 (711-789)||(24089073-24089151)
chr5 (711-792)||(29807109-29807188)
chr5 (694-788)||(30780102-30780196)
chr5 (684-778)||(30893818-30893912)
chr5 (684-741)||(40100165-40100223)
chr5 (694-747)||(5777253-5777306)
chr5 (694-747)||(30780084-30780137)
chr5 (687-748)||(40100094-40100155)
[»] chr4 (111 HSPs)
chr4 (1217-1398)||(10424123-10424313)
chr4 (1216-1398)||(21166233-21166424)
chr4 (1216-1398)||(29651190-29651381)
chr4 (1216-1398)||(26611141-26611332)
chr4 (1218-1398)||(29650416-29650604)
chr4 (1256-1398)||(26610393-26610536)
chr4 (1216-1398)||(39522374-39522565)
chr4 (1252-1398)||(21165491-21165637)
chr4 (1252-1398)||(45230409-45230555)
chr4 (1216-1398)||(10424917-10425108)
chr4 (1252-1398)||(31835192-31835338)
chr4 (1217-1398)||(36865576-36865765)
chr4 (1217-1398)||(45235818-45236008)
chr4 (1216-1371)||(11417686-11417850)
chr4 (1216-1398)||(31836317-31836509)
chr4 (1218-1398)||(36864818-36865005)
chr4 (1215-1371)||(9939123-9939285)
chr4 (1252-1371)||(38143622-38143741)
chr4 (1217-1371)||(38694836-38695002)
chr4 (1217-1320)||(11417873-11417985)
chr4 (1252-1320)||(38143532-38143600)
chr4 (1216-1320)||(9939307-9939420)
chr4 (1217-1320)||(38694702-38694814)
chr4 (684-816)||(54164817-54164949)
chr4 (684-807)||(19934642-19934765)
chr4 (684-816)||(54164817-54164949)
chr4 (687-816)||(19934642-19934771)
chr4 (684-816)||(29006839-29006971)
chr4 (684-816)||(29006839-29006971)
chr4 (706-789)||(47397911-47397994)
chr4 (1217-1310)||(39523217-39523319)
chr4 (701-806)||(12596690-12596795)
chr4 (1252-1382)||(36451302-36451431)
chr4 (683-791)||(11796588-11796695)
chr4 (681-741)||(11796663-11796723)
chr4 (681-816)||(4406245-4406380)
chr4 (688-799)||(6462733-6462844)
chr4 (681-791)||(16667093-16667202)
chr4 (681-807)||(37255683-37255808)
chr4 (711-789)||(47397911-47397989)
chr4 (684-748)||(4406245-4406309)
chr4 (712-788)||(20598289-20598365)
chr4 (685-741)||(22020121-22020177)
chr4 (686-746)||(35005129-35005189)
chr4 (682-789)||(16039963-16040070)
chr4 (686-748)||(6087505-6087567)
chr4 (1252-1310)||(11806135-11806193)
chr4 (687-741)||(26636519-26636573)
chr4 (685-819)||(48806257-48806391)
chr4 (686-799)||(4386329-4386441)
chr4 (681-814)||(4484080-4484213)
chr4 (684-749)||(34136601-34136666)
chr4 (691-799)||(2253965-2254072)
chr4 (689-789)||(2253985-2254084)
chr4 (684-788)||(4370432-4370536)
chr4 (684-816)||(12596680-12596812)
chr4 (687-799)||(14351284-14351396)
chr4 (685-789)||(37255713-37255816)
chr4 (684-788)||(54106507-54106611)
chr4 (693-748)||(17657979-17658034)
chr4 (685-748)||(52914070-52914133)
chr4 (684-742)||(5281213-5281271)
chr4 (687-789)||(5535745-5535846)
chr4 (686-732)||(9993532-9993578)
chr4 (687-788)||(18626716-18626815)
chr4 (684-746)||(20215571-20215633)
chr4 (681-735)||(46518505-46518559)
chr4 (714-815)||(2401045-2401146)
chr4 (693-806)||(3740322-3740434)
chr4 (691-748)||(16912450-16912507)
chr4 (711-792)||(25700485-25700566)
chr4 (684-789)||(31280337-31280442)
chr4 (682-807)||(48806258-48806383)
chr4 (684-788)||(55936019-55936123)
chr4 (1217-1249)||(10424387-10424419)
chr4 (684-748)||(20788107-20788171)
chr4 (1217-1249)||(21166137-21166169)
chr4 (1217-1249)||(29650657-29650689)
chr4 (1217-1249)||(31836221-31836253)
chr4 (684-788)||(33558801-33558905)
chr4 (712-788)||(33558829-33558905)
chr4 (1217-1249)||(45235733-45235765)
chr4 (681-744)||(12912610-12912673)
chr4 (685-748)||(15659940-15660003)
chr4 (681-740)||(28815863-28815922)
chr4 (681-744)||(40814745-40814808)
chr4 (684-747)||(54106479-54106542)
chr4 (685-791)||(2401045-2401151)
chr4 (686-816)||(3094273-3094402)
chr4 (694-788)||(4370414-4370508)
chr4 (687-741)||(5535721-5535775)
chr4 (711-789)||(6462743-6462821)
chr4 (681-735)||(12168635-12168689)
chr4 (684-818)||(16667068-16667201)
chr4 (768-818)||(17657995-17658045)
chr4 (684-794)||(20814533-20814643)
chr4 (693-791)||(21586931-21587029)
chr4 (684-742)||(29223946-29224004)
chr4 (691-741)||(36688428-36688478)
chr4 (768-818)||(54057645-54057695)
chr4 (711-816)||(20814533-20814638)
chr4 (684-789)||(21859486-21859591)
chr4 (684-789)||(21915349-21915454)
chr4 (691-788)||(24275249-24275345)
chr4 (711-744)||(26206625-26206658)
chr4 (685-746)||(31262668-31262729)
chr4 (687-744)||(32599556-32599613)
chr4 (682-734)||(36869974-36870027)
chr4 (687-748)||(40952355-40952416)
chr4 (711-792)||(51126136-51126217)
chr4 (685-826)||(56364331-56364472)
[»] chr2 (58 HSPs)
chr2 (1215-1398)||(21471015-21471207)
chr2 (1217-1398)||(21471812-21472002)
chr2 (1216-1398)||(37547997-37548190)
chr2 (1216-1371)||(38834386-38834550)
chr2 (1213-1319)||(14573936-14574051)
chr2 (1217-1343)||(13134318-13134453)
chr2 (1216-1320)||(38834572-38834685)
chr2 (681-816)||(15119778-15119913)
chr2 (1217-1307)||(4479651-4479750)
chr2 (1217-1320)||(14573261-14573372)
chr2 (684-789)||(41824292-41824396)
chr2 (687-806)||(41824268-41824386)
chr2 (682-799)||(25272344-25272460)
chr2 (684-816)||(44274546-44274677)
chr2 (685-820)||(32630406-32630541)
chr2 (682-748)||(45472412-45472478)
chr2 (684-788)||(3123935-3124039)
chr2 (684-804)||(38465793-38465913)
chr2 (684-788)||(44274574-44274677)
chr2 (684-807)||(14952778-14952901)
chr2 (684-823)||(15446783-15446921)
chr2 (682-749)||(15446849-15446916)
chr2 (681-816)||(23143487-23143622)
chr2 (681-816)||(23555277-23555412)
chr2 (685-807)||(1961322-1961444)
chr2 (687-748)||(11093537-11093598)
chr2 (711-789)||(18731302-18731379)
chr2 (685-747)||(43714121-43714183)
chr2 (1216-1249)||(1164792-1164825)
chr2 (684-745)||(23143561-23143622)
chr2 (684-745)||(23555351-23555412)
chr2 (711-792)||(43341157-43341238)
chr2 (681-746)||(43426629-43426694)
chr2 (687-807)||(1961316-1961436)
chr2 (686-807)||(23738332-23738454)
chr2 (684-748)||(26229517-26229581)
chr2 (684-788)||(27331791-27331895)
chr2 (684-748)||(27964288-27964352)
chr2 (686-746)||(30902347-30902407)
chr2 (684-788)||(31024175-31024279)
chr2 (684-748)||(32316422-32316486)
chr2 (687-746)||(15900293-15900352)
chr2 (687-806)||(18479335-18479453)
chr2 (691-742)||(31571036-31571087)
chr2 (687-778)||(43893159-43893249)
chr2 (680-746)||(323539-323605)
chr2 (684-778)||(10221976-10222070)
chr2 (684-818)||(15119779-15119913)
chr2 (685-735)||(23738324-23738374)
chr2 (706-792)||(23962299-23962385)
chr2 (681-719)||(43100750-43100788)
chr2 (711-744)||(6096346-6096379)
chr2 (1217-1250)||(17069121-17069154)
chr2 (685-826)||(25270861-25271002)
chr2 (690-735)||(30435236-30435281)
chr2 (776-813)||(31613338-31613375)
chr2 (686-735)||(43703162-43703211)
chr2 (691-788)||(44089458-44089555)
[»] chr1 (96 HSPs)
chr1 (1215-1398)||(48972303-48972495)
chr1 (1217-1398)||(51975085-51975275)
chr1 (1215-1398)||(51974435-51974627)
chr1 (1217-1398)||(16270207-16270398)
chr1 (1217-1398)||(16271007-16271196)
chr1 (1252-1398)||(9948039-9948185)
chr1 (1252-1398)||(38930356-38930502)
chr1 (1217-1398)||(48971705-48971895)
chr1 (1252-1398)||(6076726-6076871)
chr1 (1219-1398)||(38931104-38931293)
chr1 (1217-1371)||(23440617-23440779)
chr1 (1217-1398)||(9948760-9948935)
chr1 (1252-1371)||(43737773-43737892)
chr1 (1217-1342)||(23440779-23440913)
chr1 (1216-1320)||(43737914-43738027)
chr1 (684-807)||(19175592-19175715)
chr1 (1252-1355)||(50826992-50827095)
chr1 (1217-1320)||(193850-193961)
chr1 (682-789)||(13288366-13288472)
chr1 (684-799)||(38834615-38834730)
chr1 (684-807)||(52923327-52923450)
chr1 (686-816)||(19175592-19175722)
chr1 (1252-1302)||(27888715-27888765)
chr1 (1252-1391)||(31390692-31390827)
chr1 (684-820)||(1409049-1409185)
chr1 (679-791)||(5431340-5431451)
chr1 (687-748)||(10256788-10256849)
chr1 (1252-1382)||(47334243-47334371)
chr1 (684-816)||(5431345-5431476)
chr1 (681-816)||(9675970-9676105)
chr1 (685-816)||(52923327-52923458)
chr1 (686-744)||(6340565-6340623)
chr1 (684-778)||(14891780-14891874)
chr1 (682-747)||(34597522-34597587)
chr1 (682-807)||(42660370-42660493)
chr1 (685-806)||(42915661-42915781)
chr1 (684-744)||(4602720-4602780)
chr1 (687-791)||(39940516-39940619)
chr1 (691-815)||(44673897-44674020)
chr1 (684-748)||(47446703-47446767)
chr1 (685-748)||(52112881-52112944)
chr1 (1252-1310)||(6076018-6076076)
chr1 (694-788)||(14958713-14958807)
chr1 (682-789)||(36163989-36164097)
chr1 (681-818)||(9902570-9902706)
chr1 (682-735)||(27939189-27939242)
chr1 (711-819)||(13288366-13288473)
chr1 (684-816)||(18353576-18353708)
chr1 (711-807)||(39940518-39940613)
chr1 (685-789)||(44673917-44674020)
chr1 (1252-1365)||(12925917-12926028)
chr1 (678-789)||(14958679-14958790)
chr1 (685-748)||(18551333-18551396)
chr1 (692-807)||(43318021-43318136)
chr1 (686-748)||(1602889-1602951)
chr1 (686-748)||(2122641-2122703)
chr1 (686-744)||(6340646-6340704)
chr1 (684-818)||(9675970-9676104)
chr1 (703-745)||(29204487-29204529)
chr1 (690-788)||(31325842-31325940)
chr1 (711-816)||(38834615-38834720)
chr1 (681-807)||(52112889-52113014)
chr1 (685-746)||(4060176-4060237)
chr1 (695-788)||(8984203-8984296)
chr1 (722-799)||(24807933-24808010)
chr1 (694-747)||(34597586-34597639)
chr1 (687-816)||(45115177-45115306)
chr1 (685-741)||(6079142-6079198)
chr1 (681-741)||(12750561-12750621)
chr1 (686-742)||(13319897-13319953)
chr1 (712-788)||(15351747-15351823)
chr1 (1217-1249)||(16270901-16270933)
chr1 (684-816)||(34768283-34768414)
chr1 (1217-1249)||(38930576-38930608)
chr1 (685-788)||(3013615-3013718)
chr1 (681-748)||(9902569-9902636)
chr1 (684-791)||(34768308-34768414)
chr1 (686-788)||(34953902-34954004)
chr1 (1252-1307)||(40649516-40649571)
chr1 (685-748)||(48083509-48083572)
chr1 (691-745)||(1597264-1597318)
chr1 (685-735)||(13043425-13043475)
chr1 (684-742)||(14214607-14214665)
chr1 (684-746)||(17490492-17490554)
chr1 (702-748)||(29663738-29663784)
chr1 (711-745)||(29797803-29797837)
chr1 (690-724)||(45562851-45562885)
chr1 (684-733)||(14214554-14214603)
chr1 (711-792)||(21909872-21909953)
chr1 (685-826)||(24981846-24981987)
chr1 (722-791)||(34184463-34184532)
chr1 (687-788)||(34953928-34954029)
chr1 (692-741)||(36163970-36164019)
chr1 (691-744)||(43603638-43603691)
chr1 (712-793)||(46829904-46829985)
chr1 (722-807)||(50308641-50308726)
[»] chr8 (59 HSPs)
chr8 (1217-1398)||(38023624-38023814)
chr8 (1216-1398)||(41859309-41859500)
chr8 (1215-1398)||(32537346-32537535)
chr8 (1216-1398)||(41859954-41860145)
chr8 (1224-1398)||(37639718-37639901)
chr8 (1252-1398)||(32536752-32536895)
chr8 (1216-1371)||(34992149-34992313)
chr8 (1284-1398)||(38024389-38024502)
chr8 (1216-1398)||(5034897-5035074)
chr8 (1328-1398)||(37640455-37640525)
chr8 (1217-1320)||(34992015-34992127)
chr8 (684-816)||(28882668-28882800)
chr8 (1217-1310)||(5035222-5035324)
chr8 (686-816)||(7410571-7410701)
chr8 (684-816)||(28882668-28882800)
chr8 (685-807)||(5888341-5888463)
chr8 (684-818)||(36916587-36916721)
chr8 (684-816)||(15037754-15037887)
chr8 (685-790)||(24820303-24820407)
chr8 (684-788)||(8506222-8506325)
chr8 (687-813)||(17800636-17800760)
chr8 (693-791)||(24418910-24419007)
chr8 (684-742)||(24820375-24820433)
chr8 (685-816)||(7258593-7258721)
chr8 (682-815)||(26998671-26998804)
chr8 (685-816)||(6260613-6260744)
chr8 (684-788)||(7258617-7258721)
chr8 (685-789)||(13964424-13964528)
chr8 (684-816)||(24287789-24287921)
chr8 (684-791)||(24418885-24418991)
chr8 (684-786)||(7410599-7410701)
chr8 (726-820)||(29309467-29309561)
chr8 (682-816)||(36916587-36916721)
chr8 (685-746)||(4613634-4613694)
chr8 (682-735)||(13841850-13841903)
chr8 (686-815)||(17871768-17871897)
chr8 (687-816)||(17986198-17986327)
chr8 (1216-1249)||(44098437-44098470)
chr8 (688-788)||(5888368-5888468)
chr8 (684-788)||(11295668-11295772)
chr8 (684-788)||(24287817-24287921)
chr8 (687-791)||(36307999-36308102)
chr8 (684-747)||(10934676-10934739)
chr8 (685-816)||(13211244-13211375)
chr8 (684-818)||(13841850-13841984)
chr8 (693-748)||(18018259-18018314)
chr8 (682-788)||(21435671-21435777)
chr8 (684-739)||(36698711-36698766)
chr8 (712-791)||(43295920-43295999)
chr8 (687-813)||(2296481-2296607)
chr8 (685-791)||(2627203-2627309)
chr8 (685-807)||(6614690-6614812)
chr8 (684-746)||(29424057-29424119)
chr8 (686-748)||(33385177-33385239)
chr8 (686-748)||(35781233-35781295)
chr8 (689-742)||(7428901-7428954)
chr8 (720-789)||(20524197-20524266)
chr8 (706-791)||(40372276-40372361)
chr8 (702-791)||(44838803-44838892)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1216-1398)||(17-209)
[»] scaffold0332 (1 HSPs)
scaffold0332 (1252-1352)||(9162-9262)
[»] scaffold0041 (3 HSPs)
scaffold0041 (1331-1398)||(27471-27538)
scaffold0041 (1217-1310)||(27221-27323)
scaffold0041 (1252-1297)||(27534-27579)
[»] scaffold0148 (1 HSPs)
scaffold0148 (689-814)||(21129-21252)
[»] scaffold0149 (1 HSPs)
scaffold0149 (684-788)||(24638-24742)
[»] scaffold0294 (2 HSPs)
scaffold0294 (768-814)||(13000-13046)
scaffold0294 (686-739)||(12993-13046)
[»] scaffold0113 (1 HSPs)
scaffold0113 (682-748)||(40455-40521)
[»] scaffold0059 (1 HSPs)
scaffold0059 (684-748)||(4445-4509)
[»] scaffold0039 (1 HSPs)
scaffold0039 (687-806)||(54402-54521)
[»] scaffold1640 (1 HSPs)
scaffold1640 (682-748)||(1139-1205)
[»] scaffold1266 (2 HSPs)
scaffold1266 (706-748)||(202-244)
scaffold1266 (706-791)||(156-241)
[»] scaffold0470 (1 HSPs)
scaffold0470 (685-807)||(3976-4098)
[»] scaffold0019 (1 HSPs)
scaffold0019 (711-749)||(42794-42832)
[»] scaffold0002 (1 HSPs)
scaffold0002 (707-748)||(6138-6179)


Alignment Details
Target: chr3 (Bit Score: 422; Significance: 0; HSPs: 109)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 96 - 676
Target Start/End: Complemental strand, 24369798 - 24369193
Alignment:
Q  96 caaacttggaagttcctccatattcaaacaccaccaagcaaccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctc 195  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24369798 caaacttgaaagttcctttatattcaaacaccaccaagcaaccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctc 24369699  T
Q  196 accattgannnnnnnccaataaactttccatttagtgtcatcaggagtctttatcaccactggatttgatagaccaactccatttctctttgtaaactta 295  Q
    ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24369698 accattgatttttttccaataaactttccatttagtgtcatcaggagtctttatcaccactggatttgatagaccaactccatgtctctttgtaaactta 24369599  T
Q  296 cttggtatttgctgtaaaaattaaagaacccctttaatttggtcacttagaaaaaggtgtcaaatacaatttatagtgctaatattttgtttagttgaaa 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24369598 cttggtatttgctgtaaaaattaaagaacccctttaatttggtcacttagaaaaaggtgtcaaatacaatttatagtgctaatattttgtttagttgaaa 24369499  T
Q  396 agttctagtgctaatattataaacagaaaatatgtgaaattaatgc--------------gcatgtttgaaaagttctagtgctaaaatgtaaaattctt 481  Q
    ||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||    
T  24369498 agttctagtgctaatattataaacagaaaatatgtgaaattaatgcatatatgagatgttgcatgtttgaaaagttctagtgctaaaatgtaaaattctt 24369399  T
Q  482 gagttctagtactaaaaagaatgcttacaatcctatgaagattagtttgaaggatgattttgaagaaacggatggggaggatagaatttcctctagccat 581  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||    
T  24369398 gagttctagtactaaaaagaatgcttacaatcctatgaagattagtttgaaggatgattttgaagaaac---------ggatagaatttcctctagccat 24369308  T
Q  582 --------------------gagataacgagatgttttgattgtgtcttactgtaatctatatactgatgacatatttaagctggcaagcatgggtcatt 661  Q
                        |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  24369307 gggtgaaagagtgtgaagtggagataacgagatgttttgattgtgtcttactgtaatctatatattgatgacatatttaagctggcaagcatgggccatt 24369208  T
Q  662 acccttcaatgacta 676  Q
    ||||| |||||||||    
T  24369207 accctccaatgacta 24369193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 756 - 1105
Target Start/End: Complemental strand, 24369170 - 24368826
Alignment:
Q  756 acaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaatgaccgaaagatgcatgtgatatggtggtctgaacaagcaagatc 855  Q
    ||||||| ||||||||||||||| |||||||||| |||| ||||  |||||||| |||||| | ||||||||||||||||||||||||||||||||| ||    
T  24369170 acaatatacattatttattgaatgaatctaaaaaataga-ttttgtttataacagtgaccggaggatgcatgtgatatggtggtctgaacaagcaagctc 24369072  T
Q  856 tttacttgttgatgtctacaattaagctacctgcctagggtatcattattacatctacgaaaataatggtccgattcttcatatttcataattaggtctg 955  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24369071 tttacttgttgatgtttacaattaagctacctgcctagggtatcattattacatctacgaaaataatggtccgattcttcatatttcataattaggtctg 24368972  T
Q  956 tagtatttccattggtactaataaagtgnnnnnnnnnnnnagatatgagtattagtaatcaaataagacacatattcaaatctaaaagggaccaatatcc 1055  Q
    ||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||    
T  24368971 tagtatttccattggtactaataaagtgttttttctttttagatatgagtattagtaatcaaataagacacatat----atctaaaagggaccaatatcc 24368876  T
Q  1056 tctccaatgcctccaaaaaatgacataaataaagcatatttaaaccttat 1105  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24368875 tctccaatgcctccaaaaaatgacataaatgaagcatatttaaaccttat 24368826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 3e-70
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 52491891 - 52492076
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc----aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 1312  Q
    ||||||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  52491891 ggtgccatttaatttgggaaaggagagttctttcctggaaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctcaacca 52491990  T
Q  1313 ctagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52491991 ctagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 52492076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 3e-67
Query Start/End: Original strand, 1214 - 1398
Target Start/End: Original strand, 44686252 - 44686444
Alignment:
Q  1214 ataggtgccatttaatttgggaaaggagagttcttttca--------aagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    |||||||||||||||||||| ||||||||||| ||||||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44686252 ataggtgccatttaatttggaaaaggagagtttttttcaccatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctc 44686351  T
Q  1306 tcaaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44686352 tcaaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 44686444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 1218 - 1398
Target Start/End: Original strand, 45242067 - 45242256
Alignment:
Q  1218 gtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 1308  Q
    |||||||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45242067 gtgccatttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 45242166  T
Q  1309 accactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45242167 accactagattatttttttatactatctttcacactctctctttcatgtccccacacacccatacaaccaccactaaatcacaaattcaa 45242256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 104 - 320
Target Start/End: Complemental strand, 24344503 - 24344287
Alignment:
Q  104 gaagttcctccatattcaaacaccaccaagcaaccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctcaccattga 203  Q
    |||||||||  ||||||||||||||||||  | ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||    
T  24344503 gaagttcctttatattcaaacaccaccaaagagccatgtccaagagagtaattttcagtaaaatatttccaacccttttcaaaccaaatctcaccatcga 24344404  T
Q  204 nnnnnnnccaataaactttccatttagtgtcatcaggagtctttatcaccactggatttgatagaccaactccatttctctttgtaaacttacttggtat 303  Q
           |||||||||||||||||||||| |||| |||| ||| |||| |||||||||||||||||||||||||| | ||||||||||||||  ||||||    
T  24344403 tttttttccaataaactttccatttagtgccatctggaggcttgatcaacactggatttgatagaccaactccatgtttctttgtaaacttatgtggtat 24344304  T
Q  304 ttgctgtaaaaattaaa 320  Q
    || ||||||||||||||    
T  24344303 tttctgtaaaaattaaa 24344287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 122 - 330
Target Start/End: Complemental strand, 24354757 - 24354549
Alignment:
Q  122 aacaccaccaagcaaccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctcaccattgannnnnnnccaataaactt 221  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||||       |||||||||||    
T  24354757 aacaccaccaaacaaccatgtccaagagagtaattttcaataaaatatttccaacccttttcaaaccaaatctctccattgatttttttccaataaactt 24354658  T
Q  222 tccatttagtgtcatcaggagtctttatcaccactggatttgatagaccaactccatttctctttgtaaacttacttggtatttgctgtaaaaattaaag 321  Q
    ||||||||||| |||| |||| ||| |||| |||||||||||||||||||||||||| | || ||||||||||| |||| |||| |||||||||||||||    
T  24354657 tccatttagtgccatctggaggcttgatcaacactggatttgatagaccaactccatgtttccttgtaaacttatttggaattttctgtaaaaattaaag 24354558  T
Q  322 aaccccttt 330  Q
    |||||||||    
T  24354557 aaccccttt 24354549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 7e-62
Query Start/End: Original strand, 96 - 330
Target Start/End: Original strand, 24364849 - 24365083
Alignment:
Q  96 caaacttggaagttcctccatattcaaacaccaccaagcaaccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctc 195  Q
    |||||||||||||||||  ||||||||||| |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24364849 caaacttggaagttcctttatattcaaacatcaccaaacagccatgttcaagagagtaattttcagtaaaagttttccaacccttttcaaaccacatctc 24364948  T
Q  196 accattgannnnnnnccaataaactttccatttagtgtcatcaggagtctttatcaccactggatttgatagaccaactccatttctctttgtaaactta 295  Q
     |||||||       ||||||||||||||||  |||| ||||||||  ||| |||| ||||||||| |||||||||||||||| | || | |||||||||    
T  24364949 gccattgatttttttccaataaactttccatccagtgccatcaggaagcttgatcaacactggattagatagaccaactccatgtttcctagtaaactta 24365048  T
Q  296 cttggtatttgctgtaaaaattaaagaaccccttt 330  Q
     |||||| |||||||||||||||||||||| ||||    
T  24365049 tttggtaattgctgtaaaaattaaagaacctcttt 24365083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 7e-62
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 45243035 - 45242845
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||||||||||||||||||||| ||||||||||||         |||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  45243035 ggtgccatttaatttgggaaagaagagttcttttccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 45242936  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45242935 aaccactagattatttttttatattatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 45242845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 1e-60
Query Start/End: Original strand, 96 - 316
Target Start/End: Complemental strand, 24351698 - 24351478
Alignment:
Q  96 caaacttggaagttcctccatattcaaacaccaccaagcaaccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctc 195  Q
    |||||||||||||||||  ||||| |||||||||||| || ||||||   |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  24351698 caaacttggaagttcctttatatttaaacaccaccaaacatccatgttgtagagagtaattttcagtaaaatgtttccaacccttttcaaaccaaatctc 24351599  T
Q  196 accattgannnnnnnccaataaactttccatttagtgtcatcaggagtctttatcaccactggatttgatagaccaactccatttctctttgtaaactta 295  Q
    ||||||||       ||| |||||||||||||||||| ||||||||| ||| |||| ||||||||||| |||||||||||||| |||| ||||||| |||    
T  24351598 accattgatttttttccagtaaactttccatttagtgccatcaggagccttgatcaacactggatttgttagaccaactccatatctccttgtaaaatta 24351499  T
Q  296 cttggtatttgctgtaaaaat 316  Q
     ||||||||||||||||||||    
T  24351498 tttggtatttgctgtaaaaat 24351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 96 - 323
Target Start/End: Complemental strand, 24358445 - 24358219
Alignment:
Q  96 caaacttggaagttcctccatattcaaacaccaccaagcaaccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctc 195  Q
    ||||||||||||||| |  |||||||||||| |||||  | ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  24358445 caaacttggaagttcttttatattcaaacacaaccaaagagccatgtccaagagagtaattttcagtaaaatatttccaacccttttcaaaccaaatctc 24358346  T
Q  196 accattgannnnnnnccaataaactttccatttagtgtcatcaggagtctttatcaccactggatttgatagaccaactccatttctctttgtaaactta 295  Q
     |||||||       |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| |  |||||||| |||| | |||||||||    
T  24358345 gccattgatttttttccaataaactttccatttagtgccatcaggaggctttatcaacactggatttgataaatgaactccatatctcctagtaaactta 24358246  T
Q  296 cttggtatttgctgtaaaaattaaagaa 323  Q
     ||||||||||||| |||||||||||||    
T  24358245 tttggtatttgctg-aaaaattaaagaa 24358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 1215 - 1398
Target Start/End: Complemental strand, 36750487 - 36750296
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    ||||||||||||||||||||||||||||||||||| |         |||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  36750487 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctc 36750388  T
Q  1306 tcaaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36750387 tcaaccactagattatttttt-atactatctttcacactctctctttcatgtccccacacacccataccaccaccgctaaatcacaaattcaa 36750296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 2e-59
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 3971036 - 3971182
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||    
T  3971036 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccacttgattatttttttatactatctttcacactctctctt 3971135  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3971136 tcatgtccccacacacccataccaccaccagtaaatcacaaattcaa 3971182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 2e-59
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Complemental strand, 41756436 - 41756290
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||    
T  41756436 aaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctcaaccattagattatttttttatactatctttcacactctctctt 41756337  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41756336 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 41756290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 1218 - 1398
Target Start/End: Original strand, 38922744 - 38922933
Alignment:
Q  1218 gtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 1308  Q
    |||||||||||||||||||||||||||| ||| |         |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  38922744 gtgccatttaatttgggaaaggagagttatttcctaccatgggaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctctca 38922843  T
Q  1309 accactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38922844 accactagattatttttttatactatctttcacactctctctttcatgtcctcacacacccataccaccaccactaaatcacaaattcaa 38922933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 1217 - 1397
Target Start/End: Complemental strand, 38923713 - 38923524
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||| ||||||||||| |         ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  38923713 ggtgccatttaatttgggaaatgagagttctttcccaccatggaaaagttgataatgttcattagattaaatgaggaacatatttctatcatactctctc 38923614  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattca 1397  Q
    |||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38923613 aaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattca 38923524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 4e-57
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Complemental strand, 3998845 - 3998699
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       ||||||||||| ||||||||||||    
T  3998845 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccacttgattatttttttatactatcttttacactctctctt 3998746  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3998745 tcatgtccccacacacccataccaccaccagtaaatcacaaattcaa 3998699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 2e-56
Query Start/End: Original strand, 96 - 316
Target Start/End: Complemental strand, 24313948 - 24313727
Alignment:
Q  96 caaacttggaagttcctccatattcaaacaccaccaagcaaccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctc 195  Q
    ||||||| |||||||||  |||||  ||||  ||||| || ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  24313948 caaactttgaagttcctttatatttgaacattaccaaacacccatgtccaagagagtaattttcagtaaaaaatttccaacccctttcaaaccaaatctc 24313849  T
Q  196 accattgannnnnnn-ccaataaactttccatttagtgtcatcaggagtctttatcaccactggatttgatagaccaactccatttctctttgtaaactt 294  Q
    ||||||||        |||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||| ||||||| ||    
T  24313848 accattgattttttttccaatacactttccatttagtgccatcaggaggctttatcaacactggatttgatagaccaactccatgtctccttgtaaaatt 24313749  T
Q  295 acttggtatttgctgtaaaaat 316  Q
    | ||||||||||||||||||||    
T  24313748 atttggtatttgctgtaaaaat 24313727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 2e-56
Query Start/End: Original strand, 137 - 326
Target Start/End: Complemental strand, 24362095 - 24361906
Alignment:
Q  137 ccatgtccaagagagtaattttcagtaaaagttttccaacccttttcaaaccaaatctcaccattgannnnnnnccaataaactttccatttagtgtcat 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       |||||||||||||||||||||  |||    
T  24362095 ccatgtccaagagagtaattttcagtaaaagttttccaacccttttcgaaccaaatctcaccattgatttttttccaataaactttccatttagttccat 24361996  T
Q  237 caggagtctttatcaccactggatttgatagaccaactccatttctctttgtaaacttacttggtatttgctgtaaaaattaaagaaccc 326  Q
    |||||| ||| |||| |||||||||||| ||||||||||||| |||| ||||||||| | ||||||||| |||||||| ||||| |||||    
T  24361995 caggaggcttgatcaacactggatttgacagaccaactccatgtctccttgtaaactcatttggtattttctgtaaaatttaaacaaccc 24361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 112; E-Value: 6e-56
Query Start/End: Original strand, 1215 - 1398
Target Start/End: Original strand, 41755497 - 41755689
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    |||||| |||||||||||||||||||||||| ||| |         ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  41755497 taggtgtcatttaatttgggaaaggagagttttttcccaccatgagaaaattgatcatgttcattagattaaatgaggaacatatttctatcatactctc 41755596  T
Q  1306 tcaaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41755597 tcaaccactatattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 41755689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 6e-53
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 44687212 - 44687021
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||||||||||||| ||||||||         |||||||||||| | ||||||||||||||||||| ||||||||||||||||||||    
T  44687212 aggtgccatttaatttgggaaaggagaattcttttccaccatggaaaagttgatcatattcattagattaaatgaggaaaatattcctatcatactctct 44687113  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||| |||||||       ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  44687112 caaccattagattatttttttatactatctttcacactctctctttcatgtccccctacactcataccaccaccactaaatcacaaattcaa 44687021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 104; E-Value: 4e-51
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 3997972 - 3998115
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  3997972 aaagttgatcatatccattagattaaatgaggaacatatttctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 3998071  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||    
T  3998072 tcatgtccccacacacccat---accaccactaaatcacaaattcaa 3998115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 100; E-Value: 9e-49
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Complemental strand, 3971906 - 3971763
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  3971906 aaagttgatcatatccattagattaaatgaggaacatatttctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 3971807  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||| |||   ||||||||||||||||||||||||    
T  3971806 tcatgtccccacacactcat---accaccactaaatcacaaattcaa 3971763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 100; E-Value: 9e-49
Query Start/End: Original strand, 1216 - 1371
Target Start/End: Complemental strand, 32490244 - 32490080
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||| ||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32490244 aggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 32490145  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||||    
T  32490144 caaccactagattatttttttatactatctttcacactccctctttcatgtccccacacacccat 32490080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 1102 - 1216
Target Start/End: Complemental strand, 24368756 - 24368643
Alignment:
Q  1102 ttattttgttattgttttagtgatcagtacattttcaaataaggaggaagagtgaccatagatcgaattgcggtgaagacataaaatgttctcacaacaa 1201  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24368756 ttattttcttattgttttaatgatcagtacattttcaaataaggaggaagagtgaccata-atcgaattgcggtgacgacataaaatgttctcacaacaa 24368658  T
Q  1202 aaccattaggccata 1216  Q
    |||||||||||||||    
T  24368657 aaccattaggccata 24368643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 1217 - 1371
Target Start/End: Complemental strand, 19132860 - 19132697
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||||||||||||||||||||||| |||||||| |         ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19132860 ggtgccatttaatttgggaaaggaaagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcttatcatactctctc 19132761  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||||| |||||       ||| ||||||||||| ||||||||||||||||||||||||||||    
T  19132760 aaccactggattatttttttatattatctttcacattctctctttcatgtccccacacacccat 19132697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 5e-35
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Original strand, 19132563 - 19132675
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19132563 ggtgccatttaatttgggaaaggagagttctttcctactatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 19132662  T
Q  1308 aaccactagatta 1320  Q
    |||||||||||||    
T  19132663 aaccactagatta 19132675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 500 - 582
Target Start/End: Complemental strand, 24357998 - 24357916
Alignment:
Q  500 gaatgcttacaatcctatgaagattagtttgaaggatgattttgaagaaacggatggggaggatagaatttcctctagccatg 582  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  ||||||||| ||||||||||    
T  24357998 gaatgcttacaatcctatgaagattagtttggaggatgatcttgaagaaacggatggggagagtagaatttcttctagccatg 24357916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 488 - 582
Target Start/End: Original strand, 24365316 - 24365410
Alignment:
Q  488 tagtactaaaaagaatgcttacaatcctatgaagattagtttgaaggatgattttgaagaaacggatggggaggatagaatttcctctagccatg 582  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||||||||| | | |||||||||    
T  24365316 tagtactaataagaatgcttacaatcctttgaagattagtttggaggatgatcttgaagaaaaggatggggaggatagaatcttccctagccatg 24365410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1217 - 1314
Target Start/End: Original strand, 32489946 - 32490052
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  32489946 ggtgccatttaatttgggaaaggagaattcttttccaccatgggaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 32490045  T
Q  1308 aaccact 1314  Q
    |||||||    
T  32490046 aaccact 32490052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1222 - 1320
Target Start/End: Original strand, 36750050 - 36750157
Alignment:
Q  1222 catttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 1312  Q
    ||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||    
T  36750050 catttaatttgggaaaggagagttcttttccaccatggaaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 36750149  T
Q  1313 ctagatta 1320  Q
    ||||||||    
T  36750150 ctagatta 36750157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1216 - 1320
Target Start/End: Complemental strand, 52492328 - 52492215
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||| |||||||||||||||| |||||||||||||         ||||||| |||||||||||||||||||||||||| | |||| |||||||||||||    
T  52492328 aggtgtcatttaatttgggaaatgagagttcttttccaccatggaaaagttgttcatgtccattagattaaatgaggaatacattcttatcatactctct 52492229  T
Q  1307 caaccactagatta 1320  Q
    ||||||||||||||    
T  52492228 caaccactagatta 52492215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 358 - 435
Target Start/End: Complemental strand, 24358138 - 24358061
Alignment:
Q  358 aatacaatttatagtgctaatattttgtttagttgaaaagttctagtgctaatattataaacagaaaatatgtgaaat 435  Q
    |||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  24358138 aataaaatttctagtgccaatattttgttttgttgaaaagttctagtgctaatattgtaaacagaaaatatgttaaat 24358061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 503 - 582
Target Start/End: Complemental strand, 24354444 - 24354365
Alignment:
Q  503 tgcttacaatcctatgaagattagtttgaaggatgattttgaagaaacggatggggaggatagaatttcctctagccatg 582  Q
    |||| |||||||| |||||||||||||| |||||||| ||||||||| ||||||||| | ||||||||||||||||||||    
T  24354444 tgctcacaatcctttgaagattagtttggaggatgatcttgaagaaatggatggggaaggtagaatttcctctagccatg 24354365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 24365190 - 24365256
Alignment:
Q  369 tagtgctaatattttgtttagttgaaaagttctagtgctaatattataaacagaaaatatgtgaaat 435  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  24365190 tagtgctaatattttgttttgttgaaatgttctagtgctaatattgtaaacagaaaatatgttaaat 24365256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 686 - 814
Target Start/End: Original strand, 10841703 - 10841831
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||| ||||||| |  | ||||||| |||||||||||| | |||||||||||| || ||||| | || ||| ||||||| |||||||| |    
T  10841703 gtcactattataagcaaaaatttacgtattagattcattcaataaatgttgtatgtggtctatatattagactacatacatcatttattaaataaatcaa 10841802  T
Q  786 aaaagtagacttttacttataacaatgac 814  Q
    ||| ||||| |||| ||||||| ||||||    
T  10841803 aaatgtagatttttgcttataataatgac 10841831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 685 - 816
Target Start/End: Original strand, 611587 - 611717
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||||||||||||||| ||   |||||||||| |||||||||||||| ||||| |||||| | |||||| | || ||||||||| ||||| || ||    
T  611587 ggtcactattataagtaaaagtttgttttttagattaattcaataaatgatgtatgtagtctatat-atagaccacatacattatttaatgaattaacct 611685  T
Q  785 aaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||  |||||| ||||||| | ||||||    
T  611686 aaaaagtcaacttttgcttataatagtgaccg 611717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1252 - 1363
Target Start/End: Original strand, 45500517 - 45500626
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||  ||||||||||| ||||||||||       || ||||||| ||| |||||||||    
T  45500517 aaagttgattatgtccattagattaaatgaggaacacattcttattctactctctcaa-cactagattattgttttat-ctatcttccaccctctctctt 45500614  T
Q  1352 tcatgtccccac 1363  Q
    ||||||||||||    
T  45500615 tcatgtccccac 45500626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 678 - 807
Target Start/End: Complemental strand, 611723 - 611595
Alignment:
Q  678 atacttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaa 777  Q
    ||||| |||||||||||||||| |||| || | ||||||| || ||||| ||||| || |||||||||||| | |||||| | || ||| ||||||||||    
T  611723 atactccggtcactattataagcaaaagttgactttttaggttaattcattaaataatgtatgtggtctatat-atagactacatacatcatttattgaa 611625  T
Q  778 taaatctaaaaagtagacttttacttataa 807  Q
    | ||||||||||  | ||||||||||||||    
T  611624 ttaatctaaaaaacaaacttttacttataa 611595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 686 - 774
Target Start/End: Complemental strand, 2128495 - 2128408
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttatt 774  Q
    |||||||||||||| |||||||||  ||||||||| |||||||||||||| |||||||||||| | |||||| | |||||| |||||||    
T  2128495 gtcactattataagcaaaaattcatgttttagattcattcaataaatgatgtatgtggtctatat-atagactacatgcatcatttatt 2128408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 686 - 788
Target Start/End: Original strand, 22496957 - 22497059
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||| ||||||| |  ||||||||| ||||| |||||||| ||||||||||||   | ||||||||| | ||||| ||||||| ||||||    
T  22496957 gtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctatgataaagacaatatacgttattaattgaatgaatcta 22497056  T
Q  786 aaa 788  Q
    |||    
T  22497057 aaa 22497059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 488 - 582
Target Start/End: Complemental strand, 24351125 - 24351031
Alignment:
Q  488 tagtactaaaaagaatgcttacaatcctatgaagattagtttgaaggatgattttgaagaaacggatggggaggatagaatttcctctagccatg 582  Q
    ||||||||| | |||||||||||||||| |||||||||||||| || || || ||||||||||||||||| ||  ||| |||||  |||||||||    
T  24351125 tagtactaataggaatgcttacaatcctttgaagattagtttggagaataatcttgaagaaacggatgggaagtgtagcatttctcctagccatg 24351031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 682 - 816
Target Start/End: Original strand, 36571377 - 36571510
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    |||||||||||||||||| |||| ||   ||||||||||||||||||||||||| ||||| |||||| | ||| |  |||| ||| ||||| ||||| ||    
T  36571377 ttcggtcactattataagcaaaagtttcttttttagatttattcaataaatgatgtatgtagtctatat-ataaatcatatacatcatttaatgaatgaa 36571475  T
Q  782 tctaaaaagtagacttttacttataacaatgaccg 816  Q
      ||||||||  |||||||||||||| | ||||||    
T  36571476 cttaaaaagtcaacttttacttataatagtgaccg 36571510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 24313162 - 24313105
Alignment:
Q  500 gaatgcttacaatcctatgaagattagtttgaaggatgattttgaagaaacggatggg 557  Q
    |||||||||||||||| ||||||||||||||||| || || |||||||||||||||||    
T  24313162 gaatgcttacaatcctttgaagattagtttgaagaataatcttgaagaaacggatggg 24313105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 681 - 821
Target Start/End: Complemental strand, 36344513 - 36344372
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaat-ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaata 779  Q
    ||||| |||||||||||||||||||||   | ||||||||| ||||| |||||||| |||||||||| | | || ||  | ||  || ||||| ||| |     
T  36344513 cttcgatcactattataagtaaaaattttgtattttagattcattcattaaatgatgtatgtggtctttattattgatcacatatatcatttaatgattg 36344414  T
Q  780 aatctaaaaagtagacttttacttataacaatgaccgaaaga 821  Q
    ||||||||||||||| ||||| |||||| |||||||||||||    
T  36344413 aatctaaaaagtagagttttatttataataatgaccgaaaga 36344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 722 - 806
Target Start/End: Original strand, 1086551 - 1086635
Alignment:
Q  722 attcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttata 806  Q
    |||||||||||||| |||||||| ||| |||||||| || | ||| ||||||||||| ||||||||||||  | |||||||||||    
T  1086551 attcaataaatgatgtatgtggtatatataatagaccatgtacatcatttattgaatgaatctaaaaagtgaatttttacttata 1086635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 694 - 813
Target Start/End: Complemental strand, 1086635 - 1086516
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtag 793  Q
    |||||||||||||||| |||||||||| |||||||||||||| ||  |||||||||  ||| || | || ||| ||||||||||| ||  |||||||| |    
T  1086635 tataagtaaaaattcactttttagattcattcaataaatgatgtacatggtctattatatataccacatacatcatttattgaatgaacttaaaaagttg 1086536  T
Q  794 acttttacttataacaatga 813  Q
    |||  ||||| ||| |||||    
T  1086535 actcgtacttttaataatga 1086516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 684 - 807
Target Start/End: Original strand, 4190633 - 4190755
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||||| ||||||| || ||||||||||| || ||||| | |||| | ||||||   || ||| ||||||||||| || |    
T  4190633 cggtcactattataagaaaaaattcattttttagtttcattcaataaattatgtatgtagcctatat-atagacctcatacatcatttattgaatgaacc 4190731  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||||||  |||||| |||||||    
T  4190732 taaaaagtcaacttttgcttataa 4190755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 681 - 788
Target Start/End: Complemental strand, 12745040 - 12744933
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||||||||||||||| ||||||| |  ||||||||  ||||| |||||||| ||||||||||||   | |||| |||| ||| ||| ||||||| |    
T  12745040 cttcggtcactattataagcaaaaattaacattttagatacattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatga 12744941  T
Q  781 atctaaaa 788  Q
    ||||||||    
T  12744940 atctaaaa 12744933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 694 - 788
Target Start/End: Original strand, 4980287 - 4980381
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||| |||||||||  ||||||||| |||||||||||||||||||| ||||||   | |||| | || ||| ||||||||||| |||||||||    
T  4980287 tataagcaaaaattcatattttagattcattcaataaatgatatatgttgtctataataaagactacatacatcatttattgaatgaatctaaaa 4980381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 691 - 807
Target Start/End: Complemental strand, 8256953 - 8256840
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaag 790  Q
    |||||||| |||||||||| |||||| ||| ||||||||||||||  ||||||   || ||||| || | || ||| |||||||||||||||||||| |     
T  8256953 tattataaataaaaattcactttttaaattcattcaataaatgatgcatgtgg---atataatataccacatacatcatttattgaataaatctaaacaa 8256857  T
Q  791 tagacttttacttataa 807  Q
    ||||| ||| |||||||    
T  8256856 tagacgttttcttataa 8256840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 500 - 582
Target Start/End: Complemental strand, 24361747 - 24361665
Alignment:
Q  500 gaatgcttacaatcctatgaagattagtttgaaggatgattttgaagaaacggatggggaggatagaatttcctctagccatg 582  Q
    |||||||||||||||| |||||||| ||||| |||||||| ||||||||||| |  || ||| |||  |||||||||||||||    
T  24361747 gaatgcttacaatcctttgaagatttgtttggaggatgatcttgaagaaacgaaatggcagggtagtttttcctctagccatg 24361665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 684 - 818
Target Start/End: Complemental strand, 36571510 - 36571377
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||||||||||||| || | ||||||  || ||||| |||||||| ||| || | ||| || ||||| | || ||| ||||||||||||||||    
T  36571510 cggtcactattataagtaaaagttgactttttaagttcattcattaaatgatgtatatgatttatata-tagactacatacatcatttattgaataaatc 36571412  T
Q  784 taaaaagtagacttttacttataacaatgaccgaa 818  Q
    ||||||  | |||||| ||||||| | ||||||||    
T  36571411 taaaaaagaaacttttgcttataatagtgaccgaa 36571377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 695 - 788
Target Start/End: Complemental strand, 4980398 - 4980305
Alignment:
Q  695 ataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||| |||||||||  ||||||||| |||||||||||||| ||||| |||| | | |||||||| ||  || ||||||||||| |||||||||    
T  4980398 ataagcaaaaattcatattttagattcattcaataaatgatgtatgtagtctttattatagacaacatatatcatttattgaatgaatctaaaa 4980305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 765 - 818
Target Start/End: Complemental strand, 29015400 - 29015347
Alignment:
Q  765 attatttattgaataaatctaaaaagtagacttttacttataacaatgaccgaa 818  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||| ||||    
T  29015400 attatttattgaataaatctaaaaagtatatttttacttataataatgatcgaa 29015347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 687 - 748
Target Start/End: Complemental strand, 39836998 - 39836937
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||| ||||| || | |||||||||| |||||||||||||| ||||||||||||    
T  39836998 tcactattataaataaaagtttactttttagattcattcaataaatgatgtatgtggtctat 39836937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 681 - 806
Target Start/End: Original strand, 40470419 - 40470544
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||||||||||| |||||| ||||||| |||||||||||| ||||| |||||||  ||||| |||| | | |||||| | || | | ||||| ||||| |    
T  40470419 cttcggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgtagtctttattatagactacatacgtcatttaatgaatga 40470518  T
Q  781 atctaaaaagtagacttttacttata 806  Q
    |||||||||  | |||||| ||||||    
T  40470519 atctaaaaatcaaacttttgcttata 40470544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 7981281 - 7981177
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | |||||| ||||||| |  |||||||||||||||||||||||||||||| |||||    | |||| | |||||| ||||||||||| || |    
T  7981281 cggtcacaaatataagcaaaaatttatattttagatttattcaataaatgatatatgttgtctacaataaagaccacatgcatcatttattgaatgaacc 7981182  T
Q  784 taaaa 788  Q
    |||||    
T  7981181 taaaa 7981177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 681 - 740
Target Start/End: Original strand, 13900229 - 13900289
Alignment:
Q  681 cttcggtcactattataagtaaaaattca-atttttagatttattcaataaatgatatatg 740  Q
    ||||||||||||||||||| |||||||||  |||||||||| |||||||||||||| ||||    
T  13900229 cttcggtcactattataagcaaaaattcacttttttagattcattcaataaatgatttatg 13900289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 675 - 739
Target Start/End: Original strand, 29015340 - 29015404
Alignment:
Q  675 taaatacttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatat 739  Q
    ||||| ||||| ||| ||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  29015340 taaattcttcgatcattattataagtaaaaatatactttttagatttattcaataaataatatat 29015404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 714 - 789
Target Start/End: Original strand, 4181965 - 4182040
Alignment:
Q  714 ttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    ||||||||||||||| |||||| ||||||||||||   |||||  |||| ||| ||| ||||||||||||||||||    
T  4181965 ttagatttattcaattaatgatgtatgtggtctataatatagatcatatacatcattgattgaataaatctaaaaa 4182040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 685 - 788
Target Start/End: Original strand, 7981150 - 7981253
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||| | |||||| |||||||||  |||||| || ||||||||||||||  ||||||||| | |  ||||||| ||  || |||||||||||||||||    
T  7981150 ggtcacaaatataagcaaaaattcatattttaggttcattcaataaatgatgcatgtggtctttattgtagacaacatatatcatttattgaataaatct 7981249  T
Q  785 aaaa 788  Q
    ||||    
T  7981250 aaaa 7981253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 788
Target Start/End: Original strand, 24722688 - 24722795
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||| |||||||||||||| ||||||| |  ||||||||| ||| | |||||||| ||||||||||||   | | ||||||| ||||||| ||||| | |    
T  24722688 cttcagtcactattataagcaaaaattaatattttagattcatttattaaatgatgtatgtggtctataataaatacaatatacattattaattgagtga 24722787  T
Q  781 atctaaaa 788  Q
    ||||||||    
T  24722788 atctaaaa 24722795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 686 - 745
Target Start/End: Original strand, 42681186 - 42681245
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtc 745  Q
    |||||||||||||||||||||| |  ||||| ||| ||| ||||||||||||||||||||    
T  42681186 gtcactattataagtaaaaatttacattttaaattcatttaataaatgatatatgtggtc 42681245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 691 - 741
Target Start/End: Original strand, 22152726 - 22152776
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||| |||||    
T  22152726 tattataagtaaaaattcaaattttatattcattcaataaatgatgtatgt 22152776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 686 - 748
Target Start/End: Original strand, 39682615 - 39682677
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||||||| | | ||||||| || ||| |||||||||| ||||||||||||    
T  39682615 gtcactattataagtaaaaaattattttttaggttcattgaataaatgatgtatgtggtctat 39682677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 721 - 807
Target Start/End: Original strand, 39836907 - 39836992
Alignment:
Q  721 tattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    ||||||||||||||| |||||  ||||| || ||||| | || ||| ||||||||||| ||||||||||||| ||||||| ||||||    
T  39836907 tattcaataaatgatgtatgtattctatata-tagaccacatacatcatttattgaatgaatctaaaaagtaaacttttatttataa 39836992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 685 - 754
Target Start/End: Original strand, 42787621 - 42787690
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttt-tagatttattcaataaatgatatatgtggtctatttaata 754  Q
    ||||||||||||||| ||||| |||||||| |||||  |||||||||||||||||||| |||||| |||||    
T  42787621 ggtcactattataagcaaaaa-tcaattttgtagatccattcaataaatgatatatgtagtctatataata 42787690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 687 - 788
Target Start/End: Complemental strand, 3648832 - 3648731
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| |||| || |  ||||| ||| ||||||| |||||| ||| | |||| | | ||||||||||| ||| ||| |||||||||||||||    
T  3648832 tcactattataagcaaaactttatattttacattcattcaatcaatgatgtatatagtctttattatagacaatatacatcattaattgaataaatctaa 3648733  T
Q  787 aa 788  Q
    ||    
T  3648732 aa 3648731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 685 - 826
Target Start/End: Complemental strand, 21217301 - 21217160
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||  |  |||||||| |||||| |||||||| ||||| |||| | | ||| ||   || ||| ||||| ||||| |||||    
T  21217301 ggtcactattataagcaaaaatcaacgttttagatatattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatct 21217202  T
Q  785 aaaaagtagacttttacttataacaatgaccgaaagatgcat 826  Q
    |||| ||||| |||| ||||||| | |||||| | |||||||    
T  21217201 aaaatgtagatttttgcttataatagtgaccggaggatgcat 21217160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 822
Target Start/End: Complemental strand, 24596942 - 24596889
Alignment:
Q  769 tttattgaataaatctaaaaagtagacttttacttataacaatgaccgaaagat 822  Q
    |||||||||| ||||||||| ||| | |||||||||||| ||||||||||||||    
T  24596942 tttattgaatgaatctaaaatgtaaatttttacttataataatgaccgaaagat 24596889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 749
Target Start/End: Complemental strand, 40639845 - 40639780
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatt 749  Q
    |||||||||||||||| ||||||| |  ||||| ||| ||||| |||||||| |||||||||||||    
T  40639845 cggtcactattataagcaaaaattaacattttaaattcattcattaaatgatgtatgtggtctatt 40639780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 105376 - 105507
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||| |||  ||||||||| |||||||||| ||| |||||||||| ||||||  | || | |||||| | || ||| || |||||||| || |    
T  105376 cggtcactattgtaaacaaaaattcactttttagattcattgaataaatgatgtatgtgaaccatat-atagaccacatacataatgtattgaatgaacc 105474  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||||||  |||||| ||||||| | ||||||    
T  105475 taaaaagtcaacttttgcttataaaagtgaccg 105507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 711 - 791
Target Start/End: Complemental strand, 4182040 - 4181960
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    |||||||||||||||||| |||||| ||| || ||||| | |||||| | || ||| ||| ||||||||||||||| ||||    
T  4182040 tttttagatttattcaatcaatgatgtatatgatctatattatagaccacatacatcattaattgaataaatctaacaagt 4181960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 723 - 807
Target Start/End: Complemental strand, 21970597 - 21970514
Alignment:
Q  723 ttcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    |||||||||| ||||||||||||||| || || || | || ||| ||||||||||| ||| ||||| ||| ||||||||||||||    
T  21970597 ttcaataaataatatatgtggtctatata-tatactacatacatcatttattgaatgaatataaaatgtaaacttttacttataa 21970514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 723 - 807
Target Start/End: Complemental strand, 21993033 - 21992950
Alignment:
Q  723 ttcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    |||||||||| ||||||||||||||| || || || | || ||| ||||||||||| ||| ||||| ||| ||||||||||||||    
T  21993033 ttcaataaataatatatgtggtctatata-tatactacatacatcatttattgaatgaatataaaatgtaaacttttacttataa 21992950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 682 - 742
Target Start/End: Original strand, 24596893 - 24596953
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    |||||||| ||||||||||||||||| |  ||||||||| |||||||||| ||| ||||||    
T  24596893 ttcggtcattattataagtaaaaatttacattttagattcattcaataaacgatgtatgtg 24596953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 26121647 - 26121571
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||||||||| |||||||| ||||||||||||   | |||| |||| ||| ||| ||||||| |||||||||    
T  26121647 ttttagatttattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 26121571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 26243787 - 26243711
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||||||||| |||||||| ||||||||||||   | |||  |||| ||||||| ||||||| |||||||||    
T  26243787 ttttagatttattcattaaatgatgtatgtggtctataataaagatgatatacattattaattgaatgaatctaaaa 26243711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 26244488 - 26244412
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||||||||| |||||||| ||||||||||||   | |||| |||| ||| ||| ||||||| |||||||||    
T  26244488 ttttagatttattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 26244412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 27707286 - 27707210
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||| |||||||||||||| |||||||||| | |  ||||||||||  || ||||||||||| ||| |||||    
T  27707286 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaatatatatcatttattgaatgaatttaaaa 27707210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 694 - 746
Target Start/End: Complemental strand, 29720275 - 29720223
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    |||||| ||||||||| |||||||||  ||||||| |||||||||||||||||    
T  29720275 tataagcaaaaattcattttttagatgcattcaattaatgatatatgtggtct 29720223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 31556264 - 31556232
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  31556264 ggtgccatttaatttgggaaaggagagttcttt 31556232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 31706721 - 31706645
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||||||||||||||||| ||| |||||||||| | |  ||||||| || ||| || |||||||| |||||||||    
T  31706721 ttttagatttattcaataaacgatgtatgtggtctttattgtagacaacatacatcatatattgaatgaatctaaaa 31706645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Original strand, 38923438 - 38923470
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  38923438 ggtgccatttaatttgggaaaggagagttcttt 38923470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Original strand, 42929010 - 42929114
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| |  || ||||| ||| ||||||| |||||| |||||||||| | | |||||| | |||||| ||||| | ||| ||||    
T  42929010 cggtcactattataagcaaaattctaaattttatattcattcaattaatgatctatgtggtctttcttatagaccacatgcatcatttactaaattaatc 42929109  T
Q  784 taaaa 788  Q
    |||||    
T  42929110 taaaa 42929114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 693 - 749
Target Start/End: Complemental strand, 44037109 - 44037053
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatt 749  Q
    |||||||||||| |||| ||| ||  || ||||||||||||||||||||||||||||    
T  44037109 ttataagtaaaagttcactttatatgttcattcaataaatgatatatgtggtctatt 44037053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 45242341 - 45242309
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  45242341 ggtgccatttaatttgggaaaggagagttcttt 45242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 816
Target Start/End: Complemental strand, 54595925 - 54595794
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||||||||||  || ||||||||| ||||| |||||||| ||| | |||| | | || ||| | || ||| ||||| ||||| ||||    
T  54595925 cggtcactattataagtaaaaatataa-ttttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatc 54595827  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||| || || |||| ||||||| | ||||||    
T  54595826 taaaatgttgatttttgcttataatagtgaccg 54595794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Original strand, 54595794 - 54595898
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  ||||||||| ||||| |||||||| ||||||||| ||   | |||| |||| ||| ||||| ||||| ||||    
T  54595794 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatc 54595893  T
Q  784 taaaa 788  Q
    |||||    
T  54595894 taaaa 54595898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1268 - 1319
Target Start/End: Original strand, 8427276 - 8427326
Alignment:
Q  1268 attagattaaatgaggaacatattcctatcatactctctcaaccactagatt 1319  Q
    |||||||||||||| |||||||||| |||||| ||||||||| |||||||||    
T  8427276 attagattaaatgaagaacatattcttatcatgctctctcaa-cactagatt 8427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 687 - 789
Target Start/End: Complemental strand, 4190761 - 4190660
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| |||| || | ||||||| || |||||||||||||| |||| ||||||| | |||| | | || ||| ||||||||||| || ||||    
T  4190761 tcactattataagcaaaagttgactttttaggttcattcaataaatgatgtatgaggtctatat-ataggctacatacataatttattgaatgaaactaa 4190663  T
Q  787 aaa 789  Q
    |||    
T  4190662 aaa 4190660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 746
Target Start/End: Complemental strand, 10872808 - 10872746
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    |||||||||||||||| ||||||| |  ||||||||| ||||||| |||||| ||| ||||||    
T  10872808 cggtcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtct 10872746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 818
Target Start/End: Original strand, 12744905 - 12745039
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||| | |  ||||||||| ||||||| |||||| ||| |||||| | | |||||| | || ||| ||||| |||||  |||    
T  12744905 cggtcactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgtatc 12745004  T
Q  784 taaaaagtagacttttacttataacaatgaccgaa 818  Q
    ||||| ||  | |||| ||||||| | ||||||||    
T  12745005 taaaatgttaatttttgcttataatagtgaccgaa 12745039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 26367583 - 26367503
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctat-ttaa---tagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||| |||||||||||||| |||||||||| | ||||   ||||||| || ||| ||||||||||| |||||||||    
T  26367583 ttttagattcattcaataaatgatgtatgtggtctttattaattgtagacaacatacatcatttattgaatgaatctaaaa 26367503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 682 - 748
Target Start/End: Complemental strand, 29241618 - 29241552
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||| |||||||||  |||||  | |||||||||| |||||||||||||| ||| ||||||||    
T  29241618 ttcggtcattattataagccaaaatcaactttttagattcattcaataaatgatgtatttggtctat 29241552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 746
Target Start/End: Complemental strand, 29565245 - 29565183
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    |||||| || |||||| ||||||||| |||||| ||  ||||||| |||||||||||||||||    
T  29565245 cggtcattaatataagcaaaaattcactttttacatacattcaattaatgatatatgtggtct 29565183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 682 - 748
Target Start/End: Complemental strand, 40639933 - 40639867
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||| ||||||||||||| ||||||  |  ||||| ||||||||| |||||||| ||||||||||||    
T  40639933 ttcgatcactattataagcaaaaatcaacattttaaatttattcattaaatgatgtatgtggtctat 40639867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 689 - 807
Target Start/End: Original strand, 41743599 - 41743717
Alignment:
Q  689 actattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||||| ||||||| |  |||||||||  |||| |||||||| ||| ||||||||   | |||| |||| ||| ||| | ||||| |||| ||||    
T  41743599 actattataagcaaaaattaatattttagattcgttcattaaatgatgtatatggtctataataaagaccatatacatcattaactgaatgaatccaaaa 41743698  T
Q  789 agtagacttttacttataa 807  Q
     ||| ||||||||||||||    
T  41743699 tgtaaacttttacttataa 41743717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 43493818 - 43493860
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||    
T  43493818 ttcaatttttagattcatttaataaatgatgtatgtggtctat 43493860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 716 - 810
Target Start/End: Original strand, 44037018 - 44037112
Alignment:
Q  716 agatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaa 810  Q
    ||||||||| |||||||||  |||||| ||||| |||||||| | ||  || ||||||||||| ||  || |||||  |||||||||||||||||    
T  44037018 agatttattaaataaatgacgtatgtgatctatataatagaccacatatatcatttattgaatgaacatataaagtgaacttttacttataacaa 44037112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 764 - 806
Target Start/End: Original strand, 45613532 - 45613574
Alignment:
Q  764 cattatttattgaataaatctaaaaagtagacttttacttata 806  Q
    ||||||||||||||||||| ||||||||  |||||||||||||    
T  45613532 cattatttattgaataaatataaaaagtcaacttttacttata 45613574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 681 - 818
Target Start/End: Complemental strand, 334804 - 334667
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||||||||||||||| |||| || |  ||| ||||| ||| ||| |||||| ||||| |||| | | |||||| ||||  || ||||||||||| |    
T  334804 cttcggtcactattataagaaaaattttacctttaagattcattgaattaatgatgtatgtagtctttattatagaccatatatatcatttattgaatta 334705  T
Q  781 atctaaaaagtagacttttacttataacaatgaccgaa 818  Q
    || |||||  | |  |||| ||||||| ||||||||||    
T  334704 atttaaaatatggggttttgcttataataatgaccgaa 334667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 398 - 435
Target Start/End: Complemental strand, 24361815 - 24361778
Alignment:
Q  398 ttctagtgctaatattataaacagaaaatatgtgaaat 435  Q
    |||||||||||||||  |||||||||||||||||||||    
T  24361815 ttctagtgctaatatcgtaaacagaaaatatgtgaaat 24361778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 702 - 735
Target Start/End: Original strand, 25645210 - 25645243
Alignment:
Q  702 aaaattcaatttttagatttattcaataaatgat 735  Q
    ||||||||||||||||||| ||||||||||||||    
T  25645210 aaaattcaatttttagattcattcaataaatgat 25645243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 681 - 742
Target Start/End: Complemental strand, 32759105 - 32759044
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    ||||| |||||| ||||| |||||||| | ||||||||| |||| ||| |||||||||||||    
T  32759105 cttcgatcactaatataaataaaaatttactttttagatatatttaattaatgatatatgtg 32759044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 706 - 747
Target Start/End: Complemental strand, 46890441 - 46890400
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    |||| |||||| |||||||||||||||||| |||||||||||    
T  46890441 ttcactttttaaatttattcaataaatgatgtatgtggtcta 46890400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 730 - 823
Target Start/End: Complemental strand, 50466902 - 50466810
Alignment:
Q  730 aatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaatgaccgaaagatg 823  Q
    ||||||||||||||||||| ||| |||  |||| ||| ||| ||||||| |||||||||  || | |||||||||||| ||||| |||| ||||    
T  50466902 aatgatatatgtggtctatataa-agatcatatacatcattaattgaatgaatctaaaatataaatttttacttataataatgatcgaatgatg 50466810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 682 - 743
Target Start/End: Complemental strand, 50603651 - 50603590
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtgg 743  Q
    |||||||||||||||||| ||||||  | ||||||  || |||||||||||||| |||||||    
T  50603651 ttcggtcactattataagcaaaaatctattttttaagttcattcaataaatgatgtatgtgg 50603590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 3e-67; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 3e-67
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Original strand, 38071897 - 38072088
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||| ||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38071897 aggtgccatttaatttaggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 38071996  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38071997 caaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 38072088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 668179 - 668369
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  668179 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctctc 668278  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||| ||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  668279 aaccaccagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 668369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 2e-62
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 37864356 - 37864165
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||||||||  |||||||||| |         ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37864356 aggtgccatttaatttgggaaataagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 37864257  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37864256 caaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 37864165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-59
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Complemental strand, 669107 - 668961
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  669107 aaagttgatcatatccattagatcaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 669008  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  669007 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 668961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 7677461 - 7677607
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||       ||||||||||| ||||||||||||    
T  7677461 aaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccactaaattatttttttatactatcttttacactctctctt 7677560  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||    
T  7677561 tcatgtccccacagactcataccaccaccactaaatcacaaattcaa 7677607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 9e-49
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 4261645 - 4261456
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||| ||||||||||||||||| |         |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  4261645 aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatatttctatcatactctct 4261546  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||| |||||||       |||||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||    
T  4261545 caaccattagattatttttttatactatctttcacactctctctttcatgtccc--cacacccatacatccaccactaaatcacaaattcaa 4261456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 1217 - 1366
Target Start/End: Original strand, 17145622 - 17145781
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17145622 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 17145721  T
Q  1308 aaccactagatta-nnnnnnnatactatctttcacactctctctttcatgtccccacaca 1366  Q
    |||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  17145722 aaccactagattattttttttatactatctttcacactctctctttcatgtccccacaca 17145781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 1215 - 1320
Target Start/End: Original strand, 38778852 - 38778966
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    ||||||||||||||||||||||||||||||||||| |         |||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  38778852 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggagcatattcctatcatactctc 38778951  T
Q  1306 tcaaccactagatta 1320  Q
    |||||||||||||||    
T  38778952 tcaaccactagatta 38778966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Complemental strand, 17145920 - 17145808
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17145920 ggtgccatttaatttgggaaaggagagttcttttttactatgggaaagttgatcatgtccattagattaaatgaataacatattcctatcatactctctc 17145821  T
Q  1308 aaccactagatta 1320  Q
    |||||||||||||    
T  17145820 aaccactagatta 17145808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1221 - 1320
Target Start/End: Original strand, 4261209 - 4261317
Alignment:
Q  1221 ccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacc 1311  Q
    ||||||||||| |||||||||||||||||||         |||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  4261209 ccatttaatttaggaaaggagagttcttttctaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacc 4261308  T
Q  1312 actagatta 1320  Q
    |||||||||    
T  4261309 actagatta 4261317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Complemental strand, 38072339 - 38072227
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||| ||| | |||| ||||||||||||||    
T  38072339 ggtgccatttaatttgggaaatgagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgatgaatacattcttatcatactctctc 38072240  T
Q  1308 aaccactagatta 1320  Q
    |||||||||||||    
T  38072239 aaccactagatta 38072227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Complemental strand, 38779611 - 38779500
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  38779611 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcttataatactctctc 38779512  T
Q  1308 aaccactagatta 1320  Q
    || ||||||||||    
T  38779511 aa-cactagatta 38779500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 685 - 799
Target Start/End: Original strand, 37491278 - 37491392
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||| | |||||||||||||| |||||||||| ||||| |||||| |||  ||| |||| ||| ||||||| ||| |||||    
T  37491278 ggtcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgtagtctatataagtgaccatatacatcatttattaaatgaatct 37491377  T
Q  785 aaaaagtagactttt 799  Q
    |||||||| ||||||    
T  37491378 aaaaagtaaactttt 37491392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 681 - 806
Target Start/End: Complemental strand, 18654685 - 18654560
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||| |||||||||||||||| || || | |||||||||||||| |||||||||| ||| |||| ||||  |||||| | || ||||||||||||||  |    
T  18654685 cttctgtcactattataagtacaagtttattttttagatttatttaataaatgatgtatatggtatattatatagaccacatacattatttattgaaaga 18654586  T
Q  781 atctaaaaagtagacttttacttata 806  Q
    | |||||||||| |||||| ||||||    
T  18654585 acctaaaaagtaaactttttcttata 18654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1219 - 1310
Target Start/End: Complemental strand, 7677855 - 7677755
Alignment:
Q  1219 tgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 1309  Q
    ||||||||||||||||||||||||||||||| |         |||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||    
T  7677855 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacacattcttatcatattctctcaa 7677756  T
Q  1310 c 1310  Q
    |    
T  7677755 c 7677755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 684 - 807
Target Start/End: Original strand, 18654550 - 18654673
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||| |||||| |||| || | ||||||| ||  |||||||||| || |||||||||||| ||||| || |||| ||| ||||||| ||||||||    
T  18654550 cggtcactactataagaaaaagtttactttttaggttctttcaataaataatgtatgtggtctatataatataccatatacatcatttattaaataaatc 18654649  T
Q  784 taaaaagtagacttttacttataa 807  Q
    |||||| || |||| |||||||||    
T  18654650 taaaaaataaacttgtacttataa 18654673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 689 - 816
Target Start/End: Complemental strand, 38940350 - 38940224
Alignment:
Q  689 actattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||||||| |||||||||| |||||| ||| ||| |||||||||| ||||| |||||| || ||||| | || ||||||||||||||| |||||||||    
T  38940350 actattataattaaaaattcactttttaaattcatttaataaatgatgtatgtagtctatata-tagaccacattcattatttattgaatgaatctaaaa 38940252  T
Q  789 agtagacttttacttataacaatgaccg 816  Q
     ||  | |||| ||||||| ||||||||    
T  38940251 tgtcaatttttgcttataataatgaccg 38940224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 686 - 807
Target Start/End: Original strand, 30457737 - 30457857
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||||||||||| | | ||||  || |||||||||||||| |||||| ||||| | |||||||| || ||  ||||||||||| ||| ||    
T  30457737 gtcactattataagtaaaaattgattctttaagttcattcaataaatgatgtatgtgatctatat-atagacaacatacaacatttattgaatgaattta 30457835  T
Q  786 aaaagtagacttttacttataa 807  Q
    ||||||  ||||||||||||||    
T  30457836 aaaagtgaacttttacttataa 30457857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 684 - 808
Target Start/End: Original strand, 43813129 - 43813253
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||||||  ||||| ||||||   || ||| | || ||| ||||||||||| ||||    
T  43813129 cggtcactattataagcaaaaatttaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatc 43813228  T
Q  784 taaaaagtagacttttacttataac 808  Q
    ||| |||| || |||| ||| ||||    
T  43813229 taagaagttgatttttgcttgtaac 43813253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 685 - 807
Target Start/End: Original strand, 12274814 - 12274936
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| |||||| ||  |||||  || |||||||||||||| ||||||| ||||   |||||| | || |||||| |||||||| |||||    
T  12274814 ggtcactattataagcaaaaatccacattttatgttcattcaataaatgatgtatgtggcctataatatagaccacatacattatatattgaatgaatct 12274913  T
Q  785 aaaaagtagacttttacttataa 807  Q
    |||||||| | |||| |||||||    
T  12274914 aaaaagtacatttttgcttataa 12274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1215 - 1304
Target Start/End: Original strand, 41194511 - 41194608
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactct 1304  Q
    ||||||||||||||||||||||||||||||||||| |         |||||| ||||||||||||| ||| |||||||||||||||| |||||||||||    
T  41194511 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttaatcatgtccattaaatt-aatgaggaacatattcttatcatactct 41194608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 684 - 813
Target Start/End: Complemental strand, 8169232 - 8169104
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||| ||||||||||| |||| || | |||||||||| |||||||||||||| ||||| |||||| | |||||| | || ||| ||||||||||| || |    
T  8169232 cggttactattataagcaaaagttaactttttagattcattcaataaatgatgtatgtagtctatat-atagaccacatacatcatttattgaatgaacc 8169134  T
Q  784 taaaaagtagacttttacttataacaatga 813  Q
    |||||||   |||||| ||||||| |||||    
T  8169133 taaaaagccaacttttgcttataataatga 8169104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 685 - 807
Target Start/End: Complemental strand, 27165304 - 27165178
Alignment:
Q  685 ggtcactattataagtaaaaattcaattttta----gatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||||||||||||| |||||||| | ||||||     ||| |||||||||||||| ||| || |||||| |||| || |||| ||| ||||||| ||| |    
T  27165304 ggtcactattataaataaaaatttactttttacctttattcattcaataaatgatgtatatgatctattaaataaaccatatacataatttattaaatga 27165205  T
Q  781 atctaaaaagtagacttttacttataa 807  Q
    ||||||||| |||||||||| ||||||    
T  27165204 atctaaaaaatagacttttatttataa 27165178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1217 - 1285
Target Start/End: Complemental strand, 37469053 - 37468976
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaa 1285  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  37469053 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaa 37468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 807
Target Start/End: Original strand, 8169128 - 8169223
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    ||||||| || |||||||||||||| |||||||||||| | |||||| | || ||| ||||||||||| ||||||||||||  |||||| |||||||    
T  8169128 tttttaggttcattcaataaatgatgtatgtggtctatat-atagactacatacatcatttattgaatgaatctaaaaagttaacttttgcttataa 8169223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 684 - 793
Target Start/End: Original strand, 10095723 - 10095832
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||| |  ||||||||| ||||| |||||||| ||||||||||||   | |||| |||| ||| ||| | | ||||||||    
T  10095723 cggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctatgataaagaccatatacataattaaataaataaatc 10095822  T
Q  784 taaaaagtag 793  Q
    ||||| ||||    
T  10095823 taaaatgtag 10095832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 684 - 817
Target Start/End: Original strand, 11602772 - 11602904
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||||||||||||| || | ||||||| || ||||| ||||| || ||||||  |||| | |||||| | || ||| ||||||||||| ||||    
T  11602772 cggtcactattataagtaaaagttgattttttaggttcattcattaaattatgtatgtgaactatat-atagactacatacatcatttattgaatgaatc 11602870  T
Q  784 taaaaagtagacttttacttataacaatgaccga 817  Q
    ||||||||  ||||||  |||||| | |||||||    
T  11602871 taaaaagtgaacttttgtttataatagtgaccga 11602904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 683 - 748
Target Start/End: Complemental strand, 11602904 - 11602839
Alignment:
Q  683 tcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||||  |||| |||| |||||||||| |||||||||||||| ||||| ||||||    
T  11602904 tcggtcactattataaacaaaagttcactttttagattcattcaataaatgatgtatgtagtctat 11602839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 684 - 788
Target Start/End: Original strand, 14995869 - 14995973
Alignment:
Q  684 cggtcactattataagtaaaaattcaat-ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    ||||||| | |||||| |||||| |||| ||||| ||| ||||||||||||||||||||||||| | |  ||||||| |||||| ||||||||||  |||    
T  14995869 cggtcacaaatataagcaaaaat-caatgttttaaattcattcaataaatgatatatgtggtctttattgtagacaacatgcatcatttattgaacgaat 14995967  T
Q  783 ctaaaa 788  Q
    ||||||    
T  14995968 ctaaaa 14995973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 686 - 807
Target Start/End: Complemental strand, 37491407 - 37491286
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||  |||| || | |||||||||| ||| |||||||||| ||| |||||  ||  |||||| | || ||| ||||||| ||||||||||    
T  37491407 gtcactattataatcaaaagtttactttttagattcatttaataaatgatgtatatggtcacttatatagactacatacatcatttatttaataaatcta 37491308  T
Q  786 aaaagtagacttttacttataa 807  Q
    ||||||| | |||| |||||||    
T  37491307 aaaagtaaatttttgcttataa 37491286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 699 - 807
Target Start/End: Original strand, 21099263 - 21099370
Alignment:
Q  699 gtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttt 798  Q
    ||||||||| | ||||||| || |||||||||||||| || ||||||||| | |||||| | || | | ||||||||||| ||| ||||||||  |||||    
T  21099263 gtaaaaattgattttttaggttcattcaataaatgatgtaagtggtctatat-atagactacatacgtcatttattgaatgaatataaaaagtgaacttt 21099361  T
Q  799 tacttataa 807  Q
    |||||||||    
T  21099362 tacttataa 21099370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 684 - 747
Target Start/End: Complemental strand, 785688 - 785625
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    |||||||||||||||| |||||||||  |||||  || |||||||||||||||||||| |||||    
T  785688 cggtcactattataaggaaaaattcacattttacgttcattcaataaatgatatatgtagtcta 785625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 689 - 784
Target Start/End: Original strand, 2533949 - 2534044
Alignment:
Q  689 actattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||| ||||||| |  |||||||||||||||||| ||||| |||||||| |||   | |||| |||| ||||||| ||||||| |||||    
T  2533949 actattataagcaaaaatttatattttagatttattcaatagatgatgtatgtggtgtataataaagactatatacattattaattgaatgaatct 2534044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 686 - 789
Target Start/End: Complemental strand, 21099377 - 21099275
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    ||||||||||||||||||| |||| |||||| ||| |||||||||||||  ||||| |||||| | |||||| |  | ||| ||||||||||| || |||    
T  21099377 gtcactattataagtaaaagttcactttttatattcattcaataaatgacgtatgtagtctatat-atagaccacttacatcatttattgaatgaaccta 21099279  T
Q  786 aaaa 789  Q
    ||||    
T  21099278 aaaa 21099275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 681 - 747
Target Start/End: Original strand, 2943213 - 2943279
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    ||||||||||||||||||| ||||||  |  ||||||||| ||||| |||||||| |||||||||||    
T  2943213 cttcggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcta 2943279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 685 - 807
Target Start/End: Original strand, 21387581 - 21387703
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||| |||||| |||||| || ||| |||||| ||||||| |||||| ||||| |||| | | ||| || | || ||| ||||||| ||| |||||    
T  21387581 ggtcactaatataagcaaaaatccattttctagattcattcaattaatgatgtatgtagtctttattatataccacatacatcatttattaaatgaatct 21387680  T
Q  785 aaaaagtagacttttacttataa 807  Q
    |||||||| | |||| |||||||    
T  21387681 aaaaagtaaaattttgcttataa 21387703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 684 - 818
Target Start/End: Complemental strand, 23797484 - 23797350
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||||||||||||| ||    ||||||||| ||||||| |||||| ||| |||||| | | |||||| | || ||| ||||| ||||| ||||    
T  23797484 cggtcactattataagtaaaattttgcattttagattcattcaattaatgatgtatctggtctttattatagactacatacatcatttaatgaatgaatc 23797385  T
Q  784 taaaaagtagacttttacttataacaatgaccgaa 818  Q
    ||||| | | | |||| ||||||| | ||||||||    
T  23797384 taaaatgcaaaattttgcttataatagtgaccgaa 23797350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 681 - 807
Target Start/End: Complemental strand, 28752218 - 28752092
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||| ||||||||||| ||||||| | |||||| ||| ||||| |||||||||||| ||||| ||   |||||| | || ||| ||||| ||||| |    
T  28752218 cttcggttactattataagcaaaaattaattttttacattcattcattaaatgatatatttggtcaataatatagaccaaatacatcatttaatgaatga 28752119  T
Q  781 atctaaaaagtagacttttacttataa 807  Q
    |  ||||||||  |||||| |||||||    
T  28752118 aattaaaaagttaacttttgcttataa 28752092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 714 - 816
Target Start/End: Complemental strand, 43813231 - 43813129
Alignment:
Q  714 ttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaatga 813  Q
    ||||||| |||||||||||||| ||||||||| || | |||||| | || | | ||||||||||| |||||||||| || | |||| ||||||| | |||    
T  43813231 ttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattaaatttttgcttataatagtga 43813132  T
Q  814 ccg 816  Q
    |||    
T  43813131 ccg 43813129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 805
Target Start/End: Complemental strand, 9555396 - 9555275
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||| ||||||||| |||| || |  ||||||||| ||||| |||||||| |||||||| |||   | |||| |||| ||| ||| |||||||||||     
T  9555396 cggtcattattataagcaaaactttacattttagattcattcattaaatgatgtatgtggtttatgataaagactatatacatcattaattgaataaatt 9555297  T
Q  784 taaaaagtagacttttacttat 805  Q
    ||||| ||| | ||||||||||    
T  9555296 taaaatgtaaaattttacttat 9555275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 686 - 743
Target Start/End: Complemental strand, 10599126 - 10599069
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtgg 743  Q
    |||||||||||||||||||||  | ||||||| || |||||||||||||| |||||||    
T  10599126 gtcactattataagtaaaaatctattttttaggttcattcaataaatgatgtatgtgg 10599069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 686 - 823
Target Start/End: Original strand, 18819937 - 18820074
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||| |||||||||||||| ||||  ||||  |||  |||||||||||||||||||  ||| |   |||||||| || ||| ||||||||||| ||||||    
T  18819937 gtcattattataagtaaaagttcatattttgaattctttcaataaatgatatatgtaatctttaatatagacaacatacatcatttattgaatgaatcta 18820036  T
Q  786 aaaagtagacttttacttataacaatgaccgaaagatg 823  Q
    ||| ||  | |||||||| ||| ||||| |||| ||||    
T  18820037 aaatgttaaattttacttgtaataatgatcgaaggatg 18820074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 687 - 748
Target Start/End: Complemental strand, 30457863 - 30457802
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||||| |||| |||||| ||| |||||||||||| | ||||| ||||||    
T  30457863 tcactattataagtaaaagttcactttttaaattcattcaataaatgttgtatgttgtctat 30457802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 777
Target Start/End: Complemental strand, 31417653 - 31417560
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaa 777  Q
    ||||||| | |||||| |||||||||  ||||||||| |||||||||||||| |||||| | | | |  |||||||||| ||| ||||||||||    
T  31417653 cggtcacaaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgtgatttttattgtagacaatatacatcatttattgaa 31417560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 741
Target Start/End: Original strand, 34840618 - 34840675
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    |||||| ||||||||| |||| |||| |||||||||| |||||||||||||| |||||    
T  34840618 cggtcattattataagcaaaagttcactttttagattcattcaataaatgatgtatgt 34840675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1216 - 1249
Target Start/End: Original strand, 37468909 - 37468942
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttt 1249  Q
    ||||||||||||||||||||||||||||||||||    
T  37468909 aggtgccatttaatttgggaaaggagagttcttt 37468942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 9555264 - 9555396
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||| |||||||||| || |  ||||| ||||||||||| |||||| ||| | |||| | | ||| || | || ||| ||||| ||||| ||||    
T  9555264 cggtcactatcataagtaaaattttacattttaaatttattcaattaatgatgtatatagtctttatcataaaccacatacatcatttaatgaatgaatc 9555363  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||| ||| | |||| ||||||| ||||||||    
T  9555364 taaaatgtaaagttttgcttataataatgaccg 9555396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 748
Target Start/End: Complemental strand, 12171378 - 12171314
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||| ||||||||||||||  ||||||||||| ||| | |||||||| ||||| ||||||    
T  12171378 cggtcactaatataagtaaaaatttgatttttagattcatttattaaatgatgtatgtagtctat 12171314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 693 - 789
Target Start/End: Complemental strand, 30486711 - 30486615
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    |||||||||||  || | |||||||||||||| |||||||||| |||||||| |||   ||| || | || ||||||||||| ||| ||||||||||    
T  30486711 ttataagtaaattttgactttttagatttattgaataaatgatgtatgtggtgtatgatatataccacatacattatttattcaatgaatctaaaaa 30486615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 748
Target Start/End: Complemental strand, 34478371 - 34478307
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||| ||||||| | |||||||||| ||| | |||||||| ||| ||||||||    
T  34478371 cggtcactattataagcaaaaattaattttttagattcatttactaaatgatgtatttggtctat 34478307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 748
Target Start/End: Complemental strand, 36547722 - 36547658
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||| ||||||||| ||| ||| || ||||| |||||| | ||||||||||||    
T  36547722 cggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 36547658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1218 - 1249
Target Start/End: Complemental strand, 668453 - 668422
Alignment:
Q  1218 gtgccatttaatttgggaaaggagagttcttt 1249  Q
    ||||||||||||||||||||||||||||||||    
T  668453 gtgccatttaatttgggaaaggagagttcttt 668422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 807
Target Start/End: Complemental strand, 12274945 - 12274822
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||| ||||||||||| ||||||  | |||||||||| |||||||| || || |||||||||||| | |||| | | || ||| ||||||||||| ||      
T  12274945 cggtaactattataagcaaaaatgtactttttagattcattcaatatataatgtatgtggtctatattataggccacatacatcatttattgaatgaaca 12274846  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||| || || |||| |||||||    
T  12274845 taaaatgtggatttttgcttataa 12274822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 681 - 816
Target Start/End: Original strand, 23797349 - 23797484
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||||||||||||||| |||| ||    ||||||||| ||||| |||||||| ||||| ||||||   | |||| | || ||| ||| ||||||| |    
T  23797349 cttcggtcactattataagcaaaattttgcattttagattcattcattaaatgatgtatgtagtctataataaagaccagatacatcattaattgaatga 23797448  T
Q  781 atctaaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||| | | | |||||||||||| | ||||||    
T  23797449 atctaaaatgcaaaattttacttataatagtgaccg 23797484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 686 - 813
Target Start/End: Original strand, 24934557 - 24934684
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    ||||||||||||| | |||||| |  |||||| || |||||||||||||| |||||||| |||    ||||| || | ||||||||||||||| ||  ||    
T  24934557 gtcactattataaatcaaaatttacattttaggttcattcaataaatgatgtatgtggtttataatgtagaccatgtacattatttattgaatgaacata 24934656  T
Q  786 aaaagtagacttttacttataacaatga 813  Q
    ||| || || ||||  ||||||||||||    
T  24934657 aaatgtggatttttgtttataacaatga 24934684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 747
Target Start/End: Complemental strand, 25245279 - 25245216
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    |||||||||||||||| ||||||  |  ||||||||| ||||| |||||||| |||||||||||    
T  25245279 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcta 25245216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 687 - 778
Target Start/End: Original strand, 27165172 - 27165263
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaat 778  Q
    |||||||||||| ||||| |  | |||||||||| ||| ||||||| || ||| |||| |||||||||||  |||| ||| |||||||||||    
T  27165172 tcactattataaataaaagtctattttttagattcatttaataaattatgtatatggtttatttaatagatcatatacatcatttattgaat 27165263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 712 - 787
Target Start/End: Complemental strand, 27242522 - 27242447
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaa 787  Q
    ||||||||| ||||||||||||||  ||||||||| | | |||||||| || ||| ||| ||||||| ||||||||    
T  27242522 ttttagattcattcaataaatgatgcatgtggtctttattatagacaacatacatcattcattgaatgaatctaaa 27242447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 791
Target Start/End: Original strand, 38940224 - 38940330
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||| ||||||||| ||||||| |  ||||||||| ||||||||||| ||  ||||||||||| | |||||| | || ||| ||||||| ||| |||     
T  38940224 cggtcattattataagcaaaaattgacattttagattcattcaataaataatgaatgtggtctatat-atagactacatacatcatttattaaatgaatt 38940322  T
Q  784 taaaaagt 791  Q
    ||||||||    
T  38940323 taaaaagt 38940330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 742
Target Start/End: Original strand, 1706837 - 1706895
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    ||||||||| |||||||||||||| | |||||||||  ||||||| |||||| ||||||    
T  1706837 cggtcactaatataagtaaaaatttattttttagatacattcaattaatgatgtatgtg 1706895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 734
Target Start/End: Complemental strand, 10422944 - 10422894
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatga 734  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||| |||||||    
T  10422944 cggtcactaatataagcaaaaatttaatttttagattcattcattaaatga 10422894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 682 - 748
Target Start/End: Complemental strand, 25768757 - 25768691
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||||| |||||| ||  ||||||||| |||||  ||||||| ||||| ||||||    
T  25768757 ttcggtcactattataagcaaaaatacacattttagattcattcaccaaatgatgtatgtagtctat 25768691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 686 - 748
Target Start/End: Complemental strand, 25774316 - 25774254
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||| |||||| ||  ||||||||| ||||| |||||||| ||||| ||||||    
T  25774316 gtcactattataagcaaaaatacacattttagattcattcactaaatgatgtatgtagtctat 25774254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 734
Target Start/End: Original strand, 26824910 - 26824960
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatga 734  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||| |||||||    
T  26824910 cggtcactagtataagcaaaaatttaatttttagattcattcattaaatga 26824960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 693 - 807
Target Start/End: Original strand, 30486597 - 30486711
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    |||||||| ||  |||| |||||||||| ||| ||||||| || |||||||| ||| | ||| || | || ||| ||||||| ||||||||||||||||     
T  30486597 ttataagtcaattttcattttttagattcattgaataaataatgtatgtggtatatatcatacaccacatacatcatttattcaataaatctaaaaagtc 30486696  T
Q  793 gacttttacttataa 807  Q
     |  |||||||||||    
T  30486697 aaaatttacttataa 30486711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 713 - 807
Target Start/End: Original strand, 31319549 - 31319643
Alignment:
Q  713 tttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    ||||| || ||||||| ||||||||||||||||| | | |||||| | || ||| |||| |||||| |||||||||| || | |||| |||||||    
T  31319549 tttaggttcattcaattaatgatatatgtggtctttattatagactacatacatcattttttgaatgaatctaaaaaatatatttttccttataa 31319643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 706 - 791
Target Start/End: Complemental strand, 5977945 - 5977860
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    |||| |||||| ||| |||||||||||||| ||||||||||   | |||||| | || |||  |||||||||| ||||||||||||    
T  5977945 ttcattttttaaattaattcaataaatgatgtatgtggtcttcattatagaccacatacatcgtttattgaattaatctaaaaagt 5977860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 719 - 748
Target Start/End: Original strand, 6250639 - 6250668
Alignment:
Q  719 tttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||||||||||||||||||    
T  6250639 tttattcaataaatgatatatgtggtctat 6250668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 730 - 807
Target Start/End: Original strand, 11002366 - 11002443
Alignment:
Q  730 aatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    |||||| ||||||||||||  || |||| || ||||| ||| | ||||| ||||||||| ||||| ||||||||||||    
T  11002366 aatgatgtatgtggtctataaaaaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatttttacttataa 11002443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 19688236 - 19688131
Alignment:
Q  684 cggtcactattataagtaaaaat-tcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    |||||||||||||||  |||||  |||  ||||||||| ||| |||||||||| |||||||||||  ||||| || | || ||| ||||||||||| ||     
T  19688236 cggtcactattataataaaaaaaatcacattttagattcatttaataaatgatgtatgtggtctacataataaactacatacatcatttattgaatgaac 19688137  T
Q  783 ctaaaa 788  Q
    ||||||    
T  19688136 ctaaaa 19688131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 691 - 748
Target Start/End: Original strand, 21096198 - 21096255
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||| ||||||| |  ||||||||||||||| ||||| ||||||||| |||||    
T  21096198 tattataagcaaaaattaatattttagatttattcattaaataatatatgtgatctat 21096255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 712 - 809
Target Start/End: Original strand, 30138820 - 30138917
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataaca 809  Q
    |||| |||| ||||| |||||||| | ||||||||||   | |||| |||| ||| ||| ||||||| ||||||||| ||| | ||||||||||||||    
T  30138820 ttttggattcattcattaaatgatgtgtgtggtctataataaagactatatacatcattaattgaatgaatctaaaatgtaaatttttacttataaca 30138917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 687 - 748
Target Start/End: Complemental strand, 31319649 - 31319588
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||| ||||||  | |||||||||| |||||| ||||||| ||||| ||||||    
T  31319649 tcactattataaggaaaaatatattttttagattcattcaaaaaatgatgtatgtagtctat 31319588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1216 - 1249
Target Start/End: Original strand, 37864091 - 37864124
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttt 1249  Q
    ||||||||||||||||||||||||| ||||||||    
T  37864091 aggtgccatttaatttgggaaaggaaagttcttt 37864124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 684 - 741
Target Start/End: Complemental strand, 46944073 - 46944016
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    |||||| || |||||||||||||| |||||||||||  ||||||| |||||| |||||    
T  46944073 cggtcattaatataagtaaaaatttaatttttagatacattcaattaatgatgtatgt 46944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 1e-66; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 33480676 - 33480486
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33480676 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 33480577  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33480576 aaccactagattatttttttatactatctttcacactctctctttcatgttcccacacacccataccaccaccactaaatcacaaattcaa 33480486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 15083366 - 15083176
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  15083366 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 15083267  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15083266 aaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 15083176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 7e-62
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 22579935 - 22580125
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||||||||||||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22579935 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 22580034  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    || ||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  22580035 aatcactagattatttttttatactatctttcacactctctctttcatgtccctacacacccatatcaccaccactaaatcacaaattcaa 22580125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 3e-61
Query Start/End: Original strand, 1222 - 1398
Target Start/End: Original strand, 15082402 - 15082587
Alignment:
Q  1222 catttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 1312  Q
    |||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15082402 catttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 15082501  T
Q  1313 ctagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||       ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  15082502 ctagattatttttttatactatctttcacactctctctttcatgtccctacacacccatacaaccaccactaaatcacaaattcaa 15082587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 2e-56
Query Start/End: Original strand, 1219 - 1398
Target Start/End: Original strand, 33479698 - 33479887
Alignment:
Q  1219 tgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 1309  Q
    ||||||||||||||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33479698 tgccatttaatttgggaaaggagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaa 33479797  T
Q  1310 ccactagattannnnnnn-atactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||        ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33479798 ccactagattattttttttatactatctttcacactctctatttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 33479887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 1221 - 1398
Target Start/End: Complemental strand, 22587354 - 22587168
Alignment:
Q  1221 ccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacc 1311  Q
    ||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |    
T  22587354 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22587255  T
Q  1312 actagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||       |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22587254 actagattatttttttatactatctttcacactctctctttcctgtccccacacacccataccaccaccactaaatcacaaattcaa 22587168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 1217 - 1371
Target Start/End: Original strand, 33018167 - 33018330
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  33018167 ggtgccatttaatttgggaaaggagagttctttcccatcattggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctctc 33018266  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  33018267 aaccattagattatttttttatactatctttcacactctctctttcatgtccccacacacccat 33018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 1219 - 1371
Target Start/End: Original strand, 3542816 - 3542977
Alignment:
Q  1219 tgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 1309  Q
    ||||||||||||||||||||||||||| ||| |         |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3542816 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctcaa 3542915  T
Q  1310 ccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    |||||||||||       | ||||||||||||||||||||||||||||||||||||||||||    
T  3542916 ccactagattatttttttaaactatctttcacactctctctttcatgtccccacacacccat 3542977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Complemental strand, 3543111 - 3542999
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||| ||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3543111 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 3543012  T
Q  1308 aaccactagatta 1320  Q
    |||||||||||||    
T  3543011 aaccactagatta 3542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 1224 - 1342
Target Start/End: Complemental strand, 33018457 - 33018330
Alignment:
Q  1224 tttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccact 1314  Q
    |||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33018457 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccact 33018358  T
Q  1315 agattannnnnnnatactatctttcaca 1342  Q
    ||||||       |||||||||||||||    
T  33018357 agattatttttttatactatctttcaca 33018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1214 - 1320
Target Start/End: Complemental strand, 7193629 - 7193514
Alignment:
Q  1214 ataggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactct 1304  Q
    ||||||||||||||||||| ||||| ||||||||||||         |||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  7193629 ataggtgccatttaatttgagaaagtagagttcttttccatcatgggaaagttgatcatatccattagattaaatgaggaatatatttctatcatactct 7193530  T
Q  1305 ctcaaccactagatta 1320  Q
    ||||||||||||||||    
T  7193529 ctcaaccactagatta 7193514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1216 - 1371
Target Start/End: Original strand, 7193337 - 7193492
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||||||| |         |||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  7193337 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatattcttatcatactctct 7193436  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    |||||   ||||||       ||||||||||||||||||      ||||||||||||||||||||    
T  7193437 caacc---agattatttttttatactatctttcacactc------tcatgtccccacacacccat 7193492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1221 - 1315
Target Start/End: Complemental strand, 22582523 - 22582420
Alignment:
Q  1221 ccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacc 1311  Q
    ||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |    
T  22582523 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22582424  T
Q  1312 acta 1315  Q
    ||||    
T  22582423 acta 22582420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 712 - 788
Target Start/End: Original strand, 7158288 - 7158364
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||||||||||||||||||||| |||||||||| | |  |||||||||| ||| ||||||||||| |||||||||    
T  7158288 ttttagatttattcaataaatgatgtatgtggtctttattgtagacaatatacatcatttattgaatgaatctaaaa 7158364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 687 - 788
Target Start/End: Original strand, 8449581 - 8449684
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaat--agacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||| ||||||| |  |||| ||||||||||||||||||| |||||||||||| ||||  |||  |||||||| ||| ||||||| |||||    
T  8449581 tcactattataagcaaaaattaatattttggatttattcaataaatgatgtatgtggtctatataatcaagatcatatgcatcattaattgaatgaatct 8449680  T
Q  785 aaaa 788  Q
    ||||    
T  8449681 aaaa 8449684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 687 - 788
Target Start/End: Original strand, 8458385 - 8458488
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaat--agacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||| ||||||| |  |||| ||||||||||||||||||| |||||||||||| ||||  |||  |||||||| ||| ||||||| |||||    
T  8458385 tcactattataagcaaaaattaatattttggatttattcaataaatgatgtatgtggtctatataatcaagatcatatgcatcattaattgaatgaatct 8458484  T
Q  785 aaaa 788  Q
    ||||    
T  8458485 aaaa 8458488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 685 - 799
Target Start/End: Original strand, 14173395 - 14173509
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||  |||||||||||| |||||||||||||  ||||| ||||||   || ||| | || ||| ||||||||||| |||||    
T  14173395 ggtcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatct 14173494  T
Q  785 aaaaagtagactttt 799  Q
    || ||||||| ||||    
T  14173495 aagaagtagattttt 14173509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 681 - 807
Target Start/End: Complemental strand, 14173528 - 14173403
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||||||||| |||||||| ||||||  | || ||||||| |||||||||||||| ||||||||| || | |||||| | || | | ||||||||||| |    
T  14173528 cttcggtcacaattataag-aaaaatctacttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatga 14173430  T
Q  781 atctaaaaagtagacttttacttataa 807  Q
    ||||||||| |||| |||| |||||||    
T  14173429 atctaaaaattagatttttgcttataa 14173403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 685 - 799
Target Start/End: Original strand, 14177931 - 14178045
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||  |||||||||||| |||||||||||||  ||||| ||||||   || ||| | || ||| ||||||||||| |||||    
T  14177931 ggtcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatct 14178030  T
Q  785 aaaaagtagactttt 799  Q
    || ||||||| ||||    
T  14178031 aagaagtagattttt 14178045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 681 - 807
Target Start/End: Complemental strand, 14178064 - 14177939
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||||||||| |||||||| ||||||  | || ||||||| |||||||||||||| ||||||||| || | |||||| | || | | ||||||||||| |    
T  14178064 cttcggtcacaattataag-aaaaatctacttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatga 14177966  T
Q  781 atctaaaaagtagacttttacttataa 807  Q
    ||||||||| |||| |||| |||||||    
T  14177965 atctaaaaattagatttttgcttataa 14177939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 681 - 807
Target Start/End: Original strand, 16120966 - 16121092
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||||||||||||||||||||||| ||   |||||| ||| |||||||||||||| ||  |||||||| | || ||| | || ||| ||||||| ||| |    
T  16120966 cttcggtcactattataagtaaaagttatctttttaaattcattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatttaatga 16121065  T
Q  781 atctaaaaagtagacttttacttataa 807  Q
    ||||||||||| || |||| |||||||    
T  16121066 atctaaaaagttgatttttgcttataa 16121092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 691 - 735
Target Start/End: Complemental strand, 24111228 - 24111184
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  24111228 tattataagtaaaagttcaatttttagatttattcaataaatgat 24111184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 686 - 748
Target Start/End: Original strand, 18886314 - 18886376
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||| ||||||| |  ||||||||| ||||| |||||||||||||||||||||    
T  18886314 gtcactattataagcaaaaattaatattttagattcattcattaaatgatatatgtggtctat 18886376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 684 - 785
Target Start/End: Complemental strand, 15836675 - 15836574
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | ||||||||||||| ||  ||||||||| |||||||||||||| ||||||  |||| |  ||||||| || ||| ||||||||||| ||||    
T  15836675 cggtcacaaatataagtaaaaatacatgttttagattcattcaataaatgatgtatgtgacctatattgtagacaacatacatcatttattgaatgaatc 15836576  T
Q  784 ta 785  Q
    ||    
T  15836575 ta 15836574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 681 - 742
Target Start/End: Complemental strand, 32124263 - 32124202
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    ||||||||| ||||||||| ||||||| | |||||||||| ||||||||||| |||||||||    
T  32124263 cttcggtcattattataagcaaaaattgactttttagattcattcaataaataatatatgtg 32124202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 681 - 749
Target Start/End: Original strand, 17214196 - 17214264
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatt 749  Q
    ||||||||| |||||||| |||||||  | |||||| ||||||||| ||||||| ||||||||||||||    
T  17214196 cttcggtcattattataattaaaaatcaattttttaaatttattcattaaatgacatatgtggtctatt 17214264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1362 - 1398
Target Start/End: Complemental strand, 22580718 - 22580682
Alignment:
Q  1362 acacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||||||||||||||||||    
T  22580718 acacacccataccaccaccactaaatcacaaattcaa 22580682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 687 - 818
Target Start/End: Complemental strand, 16121098 - 16120967
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| ||||||  | |||||||||| ||| |||||||||| ||| ||||| ||   |||||| |  | ||| ||||||||||| ||| |||    
T  16121098 tcactattataagcaaaaatcaactttttagattcattaaataaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatgaatttaa 16120999  T
Q  787 aaagtagacttttacttataacaatgaccgaa 818  Q
    ||||   |||||||||||||| | ||||||||    
T  16120998 aaagataacttttacttataatagtgaccgaa 16120967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 15517226 - 15517122
Alignment:
Q  684 cggtcactattataagtaaaaattcaat-ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    |||||| ||||||||| |||||| |||| ||||||||| ||||| |||||||| ||||||||||||   | |||| |||| ||| ||||| ||||| |||    
T  15517226 cggtcattattataagcaaaaat-caatattttagattcattcattaaatgatgtatgtggtctataataaagacgatatacatcatttaatgaatgaat 15517128  T
Q  783 ctaaaa 788  Q
    ||||||    
T  15517127 ctaaaa 15517122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 687 - 744
Target Start/End: Complemental strand, 15718526 - 15718469
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    ||||||||||||| ||||||||| |||| | ||| |||||||||||||| ||||||||    
T  15718526 tcactattataagcaaaaattcacttttaaaattcattcaataaatgatgtatgtggt 15718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 685 - 806
Target Start/End: Original strand, 17773506 - 17773627
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||| |||||  |||||| || |||||||||  |||||||||||||| |||||||||| | | ||| |  | || ||| ||| |||||||  ||||    
T  17773506 ggtcactaatataaacaaaaatccactttttagatacattcaataaatgatgtatgtggtctttattatatatcacatacatcattaattgaatgtatct 17773605  T
Q  785 aaaaagtagacttttacttata 806  Q
    |||||||||| |||| ||||||    
T  17773606 aaaaagtagatttttgcttata 17773627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 728 - 813
Target Start/End: Original strand, 24111148 - 24111232
Alignment:
Q  728 taaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaatga 813  Q
    |||||||| |||||||| ||| || || || |||| ||| |||||||||||||||||||||| |  |||||||||||||| |||||    
T  24111148 taaatgatgtatgtggtttatata-taaactatatacatcatttattgaataaatctaaaaattgaacttttacttataataatga 24111232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 15082672 - 15082640
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  15082672 ggtgccatttaatttgggaaaggagagttcttt 15082640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Original strand, 22580597 - 22580629
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  22580597 ggtgccatttaatttgggaaaggagagttcttt 22580629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Original strand, 22587083 - 22587115
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  22587083 ggtgccatttaatttgggaaaggagagttcttt 22587115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 744
Target Start/End: Complemental strand, 31632243 - 31632183
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    ||||||||||||||||||||| || | ||||||| || ||| |||||||||| ||||||||    
T  31632243 cggtcactattataagtaaaagttgactttttaggttcatttaataaatgatgtatgtggt 31632183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 33479972 - 33479940
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  33479972 ggtgccatttaatttgggaaaggagagttcttt 33479940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 34379871 - 34379767
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  ||||||||| ||||| |||||||| ||||||||| ||   | |||| |||| ||| ||||| ||||| ||||    
T  34379871 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatc 34379772  T
Q  784 taaaa 788  Q
    |||||    
T  34379771 taaaa 34379767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 681 - 748
Target Start/End: Original strand, 4844290 - 4844357
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||| || |||||| ||||| ||| |||||||||  ||||||| |||||| ||||||||||||    
T  4844290 cttcggtcagtaatataagcaaaaaatcattttttagatacattcaattaatgatgtatgtggtctat 4844357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 687 - 746
Target Start/End: Original strand, 6032973 - 6033032
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    ||||||||||||||||||||| |  ||||||||| ||| ||||||| || ||||||||||    
T  6032973 tcactattataagtaaaaattgatattttagattcatttaataaataatgtatgtggtct 6033032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 689 - 816
Target Start/End: Complemental strand, 13463063 - 13462937
Alignment:
Q  689 actattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||||| ||||||| | ||||||| || ||||| |||||||| |||||||| ||| | |||||  | || ||| |||||||||||  ||||||||    
T  13463063 actattataagcaaaaattgactttttaggttcattcattaaatgatgtatgtggtttatat-atagattacatacatcatttattgaatggatctaaaa 13462965  T
Q  789 agtagacttttacttataacaatgaccg 816  Q
    || | |||||| ||| ||| | ||||||    
T  13462964 agcaaacttttgcttctaatagtgaccg 13462937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 682 - 737
Target Start/End: Original strand, 15718015 - 15718070
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatat 737  Q
    |||||||| ||||||||| |||||||||||||| || || ||||||||||| ||||    
T  15718015 ttcggtcattattataagcaaaaattcaattttaaggttaattcaataaataatat 15718070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 685 - 748
Target Start/End: Original strand, 30422338 - 30422401
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||| ||||||||| ||| ||| || ||||| |||||| | ||||||||||||    
T  30422338 ggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 30422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 746
Target Start/End: Original strand, 13276490 - 13276552
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    ||||||| | |||||| |||||||||  |||||| || |||||||||||||| ||||||||||    
T  13276490 cggtcacaaatataagcaaaaattcatgttttaggttcattcaataaatgatgtatgtggtct 13276552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 711 - 744
Target Start/End: Complemental strand, 7159947 - 7159914
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggt 744  Q
    |||||||||||||| |||||||||||||||||||    
T  7159947 tttttagatttatttaataaatgatatatgtggt 7159914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 722 - 791
Target Start/End: Complemental strand, 7358958 - 7358889
Alignment:
Q  722 attcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    ||||||||| |||| |||||||||||| | || ||| | |||||||||||||||||| || | |||||||    
T  7358958 attcaataattgatgtatgtggtctatattatggactacatgcattatttattgaatgaaccaaaaaagt 7358889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 684 - 744
Target Start/End: Complemental strand, 18491797 - 18491736
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaa-tgatatatgtggt 744  Q
    ||||||||||||||||||||| || | ||||||| || |||||||||| |||| ||||||||    
T  18491797 cggtcactattataagtaaaagttgactttttaggttcattcaataaattgatgtatgtggt 18491736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 687 - 744
Target Start/End: Complemental strand, 26527323 - 26527266
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    ||||||||||||| ||||||| |  ||||||||| ||||| |||||||| ||||||||    
T  26527323 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggt 26527266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 685 - 806
Target Start/End: Original strand, 28577606 - 28577727
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||| |||||| ||||||||| |||||||||  ||| ||| ||||  ||||||||||| | | ||| |  | || ||||||| |||||||  ||||    
T  28577606 ggtcactaatataagcaaaaattcattttttagatacatttaattaatgggatatgtggtctttattatatatcacatacattattaattgaatgtatct 28577705  T
Q  785 aaaaagtagacttttacttata 806  Q
    |||||||| | |||| ||||||    
T  28577706 aaaaagtatatttttgcttata 28577727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 765 - 818
Target Start/End: Original strand, 32124209 - 32124262
Alignment:
Q  765 attatttattgaataaatctaaaaagtagacttttacttataacaatgaccgaa 818  Q
    |||||||||||||| ||||||||||||  | |||| ||||||| ||||||||||    
T  32124209 attatttattgaatgaatctaaaaagtcaatttttgcttataataatgaccgaa 32124262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 1e-66; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 15184065 - 15183875
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15184065 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 15183966  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15183965 aaccactagattatttttttatgctatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 15183875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 1e-63
Query Start/End: Original strand, 1218 - 1398
Target Start/End: Complemental strand, 687395 - 687206
Alignment:
Q  1218 gtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 1308  Q
    ||||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  687395 gtgccatttaatttgggaaaggagagttcttttccactatggaaaagttgattatgtccattagattaaatgaggaacatattcctatcatactctctca 687296  T
Q  1309 accactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    | ||||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  687295 atcactaaattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 687206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 2e-62
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 33002865 - 33002674
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||| |||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33002865 aggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 33002766  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  33002765 caaccactagattatttttttatactatctttcacactctctctttcatgtccccaaacactcataccaccaccactaaatcacaaattcaa 33002674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 1e-60
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 686417 - 686606
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttca--------aagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 1308  Q
    ||||||||||||||||||||||||||||| ||  ||        ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  686417 ggtgccatttaatttgggaaaggagagtttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatattctctca 686516  T
Q  1309 accactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  686517 accactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 1e-60
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 15183088 - 15183279
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc----------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||  ||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15183088 ggtgccatttaatttgggaaaggagagtttatttcccatcatgagaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 15183187  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15183188 caaccactagattatttttttatactatctttcacactctcactttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 15183279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 1215 - 1355
Target Start/End: Original strand, 8204118 - 8204267
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    ||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8204118 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactatc 8204217  T
Q  1306 tcaaccactagattannnnnnnatactatctttcacactctctctttcat 1355  Q
    |||||||||||||||       ||||||||||||||||||||||||||||    
T  8204218 tcaaccactagattatttttttatactatctttcacactctctctttcat 8204267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 1216 - 1371
Target Start/End: Original strand, 8040194 - 8040358
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||||||||||| |||||||| |         |||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  8040194 aggtgccatttaatttgggaaaggacagttctttcccatcgtgggaaagttgatcatgtccattagattaaatgaggaatatattcttatcatactctct 8040293  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||||||| ||||       ||||||||||||||||||||||||||||||||| ||||| ||||    
T  8040294 caaccactacattatttttttatactatctttcacactctctctttcatgtccctacacatccat 8040358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 687 - 816
Target Start/End: Original strand, 1098635 - 1098763
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    |||||||||||||||||| || | |||||||||| |||||||||||||| |||||||||||| | |||||| | || ||||||||||| ||| |||||||    
T  1098635 tcactattataagtaaaagttgactttttagattcattcaataaatgatgtatgtggtctatat-atagactacatacattatttattaaatgaatctaa 1098733  T
Q  787 aaagtagacttttacttataacaatgaccg 816  Q
    ||| || |||||| ||||||| | ||||||    
T  1098734 aaaataaacttttgcttataatagtgaccg 1098763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1216 - 1320
Target Start/End: Complemental strand, 12190207 - 12190094
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||| ||||||| ||| |         |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12190207 aggtgccatttaatttgggaaaagagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 12190108  T
Q  1307 caaccactagatta 1320  Q
    ||| || |||||||    
T  12190107 caatcattagatta 12190094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 1215 - 1320
Target Start/End: Complemental strand, 36626680 - 36626566
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    ||||||||||||||||||||||| ||||||||||| |         |||||||||||||||| ||| ||||||| ||||| |||||| ||||||||||||    
T  36626680 taggtgccatttaatttgggaaatgagagttctttcccaccatgggaaagttgatcatgtccgttatattaaataaggaatatattcttatcatactctc 36626581  T
Q  1306 tcaaccactagatta 1320  Q
    |||||||||||||||    
T  36626580 tcaaccactagatta 36626566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1216 - 1320
Target Start/End: Complemental strand, 8040493 - 8040380
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||||||||||| | |||||| |         |||||| |||||||||||||||||||||  |||||||||| ||||||||||||||    
T  8040493 aggtgccatttaatttgggaaaggaaatttctttcccaccgtgggaaagttaatcatgtccattagattaaatagggaacatatttctatcatactctct 8040394  T
Q  1307 caaccactagatta 1320  Q
    ||||||||||||||    
T  8040393 caaccactagatta 8040380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 681 - 789
Target Start/End: Original strand, 2673848 - 2673956
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||||||||||||||| |||  || | ||||||| |  |||||||||||||| ||||||||||||   |||||| | |||||| |||||||||||||    
T  2673848 cttcggtcactattataagcaaattttgactttttaggtacattcaataaatgatgtatgtggtctataatatagactacatgcatcatttattgaataa 2673947  T
Q  781 atctaaaaa 789  Q
    |||||||||    
T  2673948 atctaaaaa 2673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 684 - 807
Target Start/End: Complemental strand, 1098763 - 1098641
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| || | |||||||||| ||| ||||||| || ||||| |||||| | |||||| | || ||| ||||||||||| ||||    
T  1098763 cggtcactattataagcaaaagtttattttttagattcatttaataaataatgtatgtagtctatat-atagaccacatacatcatttattgaatgaatc 1098665  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||||||  ||||||||||||||    
T  1098664 taaaaagtcaacttttacttataa 1098641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 685 - 816
Target Start/End: Original strand, 7313836 - 7313966
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||| |||||||||||| |||| |||||| ||| |||||||||||||||||||| |||||| | |||||| | || ||| ||||||||| | || ||    
T  7313836 ggtcacttttataagtaaaagttcactttttaaattcattcaataaatgatatatgtagtctatat-atagaccacatacatcatttattgattgaacct 7313934  T
Q  785 aaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||  |||||| ||||||| | ||||||    
T  7313935 aaaaagtcaacttttgcttataatagtgaccg 7313966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1216 - 1310
Target Start/End: Original strand, 33001931 - 33002034
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||| ||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||| | |||| ||||||| |||||    
T  33001931 aggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaatacattcttatcatattctct 33002030  T
Q  1307 caac 1310  Q
    ||||    
T  33002031 caac 33002034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 711 - 816
Target Start/End: Original strand, 13356168 - 13356273
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaa 810  Q
    ||||||| || |||||||||||||||||||||| |||||||||  || | || ||| ||||||||||| ||  ||||||||||| |||| ||||||| ||    
T  13356168 tttttaggttcattcaataaatgatatatgtggcctatttaatgaaccacatacatcatttattgaatgaacttaaaaagtagatttttgcttataataa 13356267  T
Q  811 tgaccg 816  Q
    ||||||    
T  13356268 tgaccg 13356273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 685 - 814
Target Start/End: Original strand, 13391536 - 13391665
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||||||||||||||| |  | |||||||||| |||||||||||||| ||| ||||| ||   |||||| | || ||| ||||||||||| || ||    
T  13391536 ggtcactattataagtaaaagtcaactttttagattcattcaataaatgatgtatttggtcaataatatagactaaatacataatttattgaatgaacct 13391635  T
Q  785 aaaaagtagacttttacttataacaatgac 814  Q
    ||||||| || |||| ||||||||| ||||    
T  13391636 aaaaagttgatttttgcttataacagtgac 13391665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 13654513 - 13654644
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||||||| ||| | ||||||| || |||||||||||||| ||||||||| || | |||||| | || ||| ||||||||||| |||     
T  13654513 cggtcactattataagtaaatattgactttttaggttcattcaataaatgatgtatgtggtccatat-atagactaaatacatcatttattgaatgaatt 13654611  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||||||  | |||| ||||||| | ||||||    
T  13654612 taaaaagtgaatttttgcttataatagtgaccg 13654644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 684 - 807
Target Start/End: Complemental strand, 7313966 - 7313844
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| || | ||||||| || | |||||||||||| |||||||||||| | |||||| | ||  || ||||||||||| |||     
T  7313966 cggtcactattataagcaaaagttgactttttaggttcaatcaataaatgatgtatgtggtctatat-atagactacatatatcatttattgaatgaatt 7313868  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||||||  ||||||||||||||    
T  7313867 taaaaagtgaacttttacttataa 7313844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 684 - 807
Target Start/End: Complemental strand, 25713834 - 25713712
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||| ||||||||  |||| || | |||||||||| ||||||||||||||||||||||||||| | |||||| |||| ||| ||||| ||||| |||     
T  25713834 cggtcattattataaacaaaagttgattttttagattcattcaataaatgatatatgtggtctatat-atagacgatatacataatttactgaatgaatt 25713736  T
Q  784 taaaaagtagacttttacttataa 807  Q
    |||||| |  ||||||| ||||||    
T  25713735 taaaaattgaacttttatttataa 25713712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 682 - 788
Target Start/End: Original strand, 4082740 - 4082846
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    ||||||||||||||||| ||||||||||  ||||||| | ||||||| ||| ||||||||| ||||  | ||  || |||| ||| ||||||||||||||    
T  4082740 ttcggtcactattataaataaaaattcatattttagactcattcaatcaataatatatgtgatctacattattaaccatatacatcatttattgaataaa 4082839  T
Q  782 tctaaaa 788  Q
    |||||||    
T  4082840 tctaaaa 4082846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 686 - 807
Target Start/End: Complemental strand, 13391665 - 13391544
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||| ||||||| ||||||  | ||||||| || ||||||||||| || ||| | |||||| | || ||| | || ||| ||||||||||| ||||||    
T  13391665 gtcactgttataagcaaaaatcaactttttaggttcattcaataaattatgtatttagtctatattattgaccaaatacatcatttattgaatgaatcta 13391566  T
Q  786 aaaagtagacttttacttataa 807  Q
    |||||| |||||||||||||||    
T  13391565 aaaagttgacttttacttataa 13391544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 684 - 789
Target Start/End: Complemental strand, 25777040 - 25776935
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  |||||  || ||||||||||||||| |||||||||||| ||||||||| ||  || ||||||||||| || |    
T  25777040 cggtcactattataagcaaaaatataccttttaagttcattcaataaatgataaatgtggtctattaaatagacaacatatatcatttattgaatgaacc 25776941  T
Q  784 taaaaa 789  Q
    ||||||    
T  25776940 taaaaa 25776935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 684 - 816
Target Start/End: Complemental strand, 13654644 - 13654513
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||||| |||||| ||| |||||||||||||| ||| | |||||| | || ||| | || ||| ||||||||||| || |    
T  13654644 cggtcactattataagcaaaaattcactttttaaattcattcaataaatgatgtatttagtctatat-atggaccacatacatcatttattgaatgaacc 13654546  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||||||  |  ||||||||||| | ||||||    
T  13654545 taaaaagtcaatatttacttataatagtgaccg 13654513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 686 - 816
Target Start/End: Original strand, 25776909 - 25777040
Alignment:
Q  686 gtcactattataagtaaaaattcaattttt-agatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||| ||||| || | ||||| || || |||||||||||||||||||| ||||||||||||||| | ||  || ||||||||||| ||  |    
T  25776909 gtcactattataaataaaattttatttttttaggttcattcaataaatgatatatgttgtctatttaatagaccacatttatcatttattgaatgaactt 25777008  T
Q  785 aaaaagtagacttttacttataacaatgaccg 816  Q
    |||| ||| | |||| ||||||| | ||||||    
T  25777009 aaaaggtatatttttgcttataatagtgaccg 25777040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 694 - 788
Target Start/End: Complemental strand, 25408669 - 25408575
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||| ||||||| |  ||||||||| |||||||||||||| |||||||||| | |  ||||||| || ||| ||||||||||| |||||||||    
T  25408669 tataagcaaaaatttatgttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatctaaaa 25408575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 687 - 741
Target Start/End: Complemental strand, 36864555 - 36864501
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    |||||||||||| ||||| |||| |||||||||| ||||||||||||||||||||    
T  36864555 tcactattataaataaaagttcactttttagattcattcaataaatgatatatgt 36864501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 712 - 813
Target Start/End: Complemental strand, 1100165 - 1100064
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaat 811  Q
    ||||||||| ||||| |||||||| ||||| |||| | | |||||| | || ||| ||||| ||||| ||||||||| ||| |||||| |||||||||||    
T  1100165 ttttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaatgaatctaaaatgtaaacttttgcttataacaat 1100066  T
Q  812 ga 813  Q
    ||    
T  1100065 ga 1100064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 685 - 778
Target Start/End: Complemental strand, 17967450 - 17967357
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaat 778  Q
    ||||||||||||||  ||||||| |  ||||| ||| |||||||||||||| |||||||||| |   |||||||| || |||||||||||||||    
T  17967450 ggtcactattataaacaaaaattgatattttatattcattcaataaatgatgtatgtggtctttaatatagacaacatacattatttattgaat 17967357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 687 - 807
Target Start/End: Original strand, 3100412 - 3100532
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| ||||||| |  ||||||||| |||||||||||||| ||||| ||||||   | |||  |||| ||| ||| ||||||| |||||||    
T  3100412 tcactattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagtctataataaagatcatatacatcattaattgaatgaatctaa 3100511  T
Q  787 aaagtagacttttacttataa 807  Q
    || ||| | ||| ||||||||    
T  3100512 aatgtaaattttcacttataa 3100532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 807
Target Start/End: Original strand, 25358062 - 25358183
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||||||||||| | |||| ||||| ||||||||||||||  ||||| ||||  ||||  ||  ||| ||| ||||||||||| ||      
T  25358062 cggtcactattataagtaaaaatttatttttaagattcattcaataaatgatgaatgtgatctacataat--actgtatacatcatttattgaatgaaca 25358159  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||| ||  ||||||||||||||    
T  25358160 taaaatgtgaacttttacttataa 25358183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 681 - 749
Target Start/End: Complemental strand, 36895375 - 36895307
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatt 749  Q
    |||||||||||||||||| | ||||| ||  ||||||||| |||||||||||||| ||||| |||||||    
T  36895375 cttcggtcactattataaattaaaatacatattttagattcattcaataaatgatgtatgtagtctatt 36895307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 748
Target Start/End: Original strand, 27895898 - 27895965
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||||||  |||| |||| |||||||||| ||| |||||||||| ||||| ||||||    
T  27895898 cttcggtcactattataaacaaaagttcattttttagattcatttaataaatgatgtatgtagtctat 27895965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 712 - 799
Target Start/End: Complemental strand, 32198968 - 32198881
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagactttt 799  Q
    ||||| ||||||| |||||||||  |||||||| ||| |||||||| | || ||||||||||||||||||  ||||| ||||| ||||    
T  32198968 ttttaaatttatttaataaatgacgtatgtggtatatataatagaccacatacattatttattgaataaacttaaaaggtagattttt 32198881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 693 - 748
Target Start/End: Original strand, 36409651 - 36409706
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||  || | |||||||||||||| |||||||||||||||||||||||    
T  36409651 ttataagtaaattttaactttttagatttattgaataaatgatatatgtggtctat 36409706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 709 - 791
Target Start/End: Complemental strand, 2673958 - 2673876
Alignment:
Q  709 aatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    |||||||||||||||||||||||||||  |||| |||||| | |||||| | || ||| |||||||||||  | |||||||||    
T  2673958 aatttttagatttattcaataaatgatgcatgtagtctatattatagaccacatacatcatttattgaatgtacctaaaaagt 2673876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 682 - 788
Target Start/End: Complemental strand, 3100543 - 3100437
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    |||| |||||||||||||| |||||| |  ||||||||| ||||||| |||||| ||| || ||| | | |||||| | || ||| ||||||||||| ||    
T  3100543 ttcgatcactattataagtgaaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaa 3100444  T
Q  782 tctaaaa 788  Q
    |||||||    
T  3100443 tctaaaa 3100437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 684 - 734
Target Start/End: Original strand, 40515231 - 40515281
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatga 734  Q
    ||||||||||||||||||||| || | |||||||||| |||||||||||||    
T  40515231 cggtcactattataagtaaaagttgactttttagattcattcaataaatga 40515281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 681 - 742
Target Start/End: Complemental strand, 554012 - 553952
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    ||||| ||| ||||||||| ||||||| | |||||||||||||||||||||| |||||||||    
T  554012 cttcgatcattattataagcaaaaattta-tttttagatttattcaataaataatatatgtg 553952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 706 - 791
Target Start/End: Original strand, 19216312 - 19216397
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    |||| ||||||| || ||||||||||||||  |||||||| ||   |||||| | |||||| |||||||||||||| |||||||||    
T  19216312 ttcattttttaggttcattcaataaatgatgcatgtggtccataatatagactacatgcatcatttattgaataaaactaaaaagt 19216397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 687 - 816
Target Start/End: Original strand, 25713706 - 25713834
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    |||||||||||| ||||| ||||||||||| ||| ||||| ||||| || ||| | |||||| | |||||| | ||  || ||||||||||| |||||||    
T  25713706 tcactattataaataaaagttcaatttttaaattcattcagtaaattatgtatatcgtctatat-atagaccacatatatcatttattgaatgaatctaa 25713804  T
Q  787 aaagtagacttttacttataacaatgaccg 816  Q
    ||| |  ||||||  |||||| ||||||||    
T  25713805 aaaatcaacttttgtttataataatgaccg 25713834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 745
Target Start/End: Complemental strand, 25792982 - 25792921
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtc 745  Q
    |||||||||||||||| ||||||| | ||||||| || ||||| |||||||| |||||||||    
T  25792982 cggtcactattataagcaaaaatttactttttaggttcattcattaaatgatgtatgtggtc 25792921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 685 - 742
Target Start/End: Complemental strand, 43506229 - 43506172
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    ||||||||||||||| |||| |||| |||||||||| ||||| |||||||| ||||||    
T  43506229 ggtcactattataagcaaaatttcactttttagattcattcattaaatgatgtatgtg 43506172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 686701 - 686669
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  686701 ggtgccatttaatttgggaaaggagagttcttt 686669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 688 - 744
Target Start/End: Complemental strand, 4082870 - 4082814
Alignment:
Q  688 cactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    |||||||||||  |||||||||  |||||||||||||||||||||||| ||| ||||    
T  4082870 cactattataaacaaaaattcacattttagatttattcaataaatgatgtatatggt 4082814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 708 - 792
Target Start/End: Original strand, 12295704 - 12295788
Alignment:
Q  708 caatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    ||||||||| ||||||| ||||||| || ||||| || |||   |||||| | || ||||||||||||||| |||||||||||||    
T  12295704 caatttttaaatttatttaataaattatgtatgtcgtttataatatagactacatacattatttattgaatgaatctaaaaagta 12295788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Original strand, 25408547 - 25408651
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | |||||| |||||||||  ||||||||| |||||||||||||| ||||| |||||    | |||| | || ||| ||||||||||| ||||    
T  25408547 cggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattgaatgaatc 25408646  T
Q  784 taaaa 788  Q
    |||||    
T  25408647 taaaa 25408651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Original strand, 39950404 - 39950436
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  39950404 ggtgccatttaatttgggaaaggagagttcttt 39950436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 39950480 - 39950448
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  39950480 ggtgccatttaatttgggaaaggagagttcttt 39950448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 792
Target Start/End: Original strand, 42247556 - 42247664
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||  || | ||||||  || |||||||||||||| || ||||||||| | |||| | | || ||| |||||||| || ||||    
T  42247556 cggtcactattataagcaaattttgactttttatgttcattcaataaatgatgtacgtggtctatattataggccacatacatcatttattggatgaatc 42247655  T
Q  784 taaaaagta 792  Q
    |||||||||    
T  42247656 taaaaagta 42247664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 685 - 745
Target Start/End: Original strand, 43506112 - 43506172
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtc 745  Q
    ||||||||||||||| |||| |||| |||||||||| | ||| |||||||| |||||||||    
T  43506112 ggtcactattataagcaaaatttcactttttagattcaatcattaaatgatgtatgtggtc 43506172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 806
Target Start/End: Complemental strand, 11795872 - 11795750
Alignment:
Q  684 cggtcactattataagtaaaaattcaat-ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    |||||| ||||||||| |||||| |||| ||||  ||| ||||| |||||||||||||||||||||   | |||| |||| ||| ||| ||||||| |||    
T  11795872 cggtcattattataagcaaaaat-caatattttttattcattcattaaatgatatatgtggtctataataaagaccatatacatcattaattgaatgaat 11795774  T
Q  783 ctaaaaagtagacttttacttata 806  Q
    |||||| || || |||| ||||||    
T  11795773 ctaaaatgttgatttttgcttata 11795750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 706 - 789
Target Start/End: Complemental strand, 19216400 - 19216317
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    |||| ||||||| |||||||||||||||||  |||| |||||| | || ||| | |||||| ||||||||||| || |||||||    
T  19216400 ttcactttttagttttattcaataaatgatgcatgtagtctatattatggaccacatgcatcatttattgaatgaacctaaaaa 19216317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 712 - 807
Target Start/End: Original strand, 20518203 - 20518298
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    ||||||||||||||| | |||||| ||||||||||||   | |||| || ||||| ||| | ||||| ||| ||||||||||| |||| |||||||    
T  20518203 ttttagatttattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatgtaaaaagtagatttttgcttataa 20518298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 807
Target Start/End: Complemental strand, 25694251 - 25694128
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  | ||| ||| || ||||| |||||||| ||| |||||||| | || ||||| || ||| ||||| ||||| || |    
T  25694251 cggtcactattataagcaaaaatcaactttctaggttcattcattaaatgatgtatttggtctatattattgacaaaatacatcatttaatgaatgaacc 25694152  T
Q  784 taaaaagtagacttttacttataa 807  Q
    || ||||| || |||| |||||||    
T  25694151 tagaaagttgatttttgcttataa 25694128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 806
Target Start/End: Original strand, 25772158 - 25772281
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatg-atatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    ||||||||| |||||| |||||||  ||||||||||| ||||| |||||| |  ||||| |||| | | |||||| |||| | ||||||| ||||| |||    
T  25772158 cggtcactaatataagcaaaaatttgatttttagattcattcattaaatgaacgtatgtagtctttattatagactatatacgttatttaatgaatgaat 25772257  T
Q  783 ctaaaaagtagacttttacttata 806  Q
    |||||||  | |||||| ||||||    
T  25772258 ctaaaaatcaaacttttgcttata 25772281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 685 - 748
Target Start/End: Complemental strand, 33075200 - 33075137
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||| ||||||| |  |||||| || ||||| |||||||| ||||||||||||    
T  33075200 ggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctat 33075137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1328 - 1371
Target Start/End: Original strand, 36626501 - 36626544
Alignment:
Q  1328 atactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||    
T  36626501 atactatctttcacattctctctttcatgtctccacatacccat 36626544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 691 - 738
Target Start/End: Original strand, 38321961 - 38322008
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatata 738  Q
    |||||||||||||| |||| |||||||||||||| ||||| |||||||    
T  38321961 tattataagtaaaatttcactttttagatttattaaataattgatata 38322008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 780
Target Start/End: Complemental strand, 1180800 - 1180714
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||||| ||||||| |  |||||| || ||||||||||| || |||||||||| | |  ||||||| || |||||||||||||||||    
T  1180800 tataagcaaaaatttacgttttaggttcattcaataaataatgtatgtggtctttattgtagacaacatacattatttattgaataa 1180714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 706 - 792
Target Start/End: Original strand, 6279436 - 6279522
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    |||||||||||| || ||||| |||||||| ||||||||||||   || ||| | || ||| ||||||||||| ||| |||||||||    
T  6279436 ttcaatttttaggttcattcactaaatgatgtatgtggtctataatatggaccacatacataatttattgaatgaatataaaaagta 6279522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 768 - 814
Target Start/End: Original strand, 7613446 - 7613492
Alignment:
Q  768 atttattgaataaatctaaaaagtagacttttacttataacaatgac 814  Q
    ||||||| ||| |||||||||||| ||||||||||||||||| ||||    
T  7613446 atttattaaatgaatctaaaaagttgacttttacttataacagtgac 7613492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 742
Target Start/End: Original strand, 18261604 - 18261662
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    |||||||||||||||| |||| |||| ||| |||||| ||||||||||| || ||||||    
T  18261604 cggtcactattataagcaaaagttcactttatagattcattcaataaataatgtatgtg 18261662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 711 - 789
Target Start/End: Original strand, 24089073 - 24089151
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    ||||||| || |||||||||||||| ||||||||| || | |||||| | || ||| ||||||||||| || |||||||    
T  24089073 tttttaggttcattcaataaatgatgtatgtggtccatattatagaccacattcatcatttattgaatgaacctaaaaa 24089151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 711 - 792
Target Start/End: Original strand, 29807109 - 29807188
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    |||||||||| ||||||| |||||| |||||||||||  |||| ||| | || ||| ||| ||||||| |||||||||||||    
T  29807109 tttttagattcattcaattaatgatgtatgtggtcta--taatggaccacatacataattaattgaatgaatctaaaaagta 29807188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 788
Target Start/End: Complemental strand, 30780196 - 30780102
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||| ||||||| |  ||||| ||| |||||||||||||| |||| ||||| | |  ||||||| || ||| ||||||||||||||| |||||    
T  30780196 tataagcaaaaatttatgttttaaattcattcaataaatgatgtatgcggtctttattgtagacaacatacatcatttattgaataaatttaaaa 30780102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 778
Target Start/End: Complemental strand, 30893912 - 30893818
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaat 778  Q
    ||||||| | |||||| |||||| ||  ||||||||| |||||||||||||| |||||||||| | |  ||| ||| || ||| |||||||||||    
T  30893912 cggtcacaaatataagaaaaaatccatgttttagattcattcaataaatgatgtatgtggtctttattgtaggcaacatacatcatttattgaat 30893818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 741
Target Start/End: Complemental strand, 40100223 - 40100165
Alignment:
Q  684 cggtcactattataagtaaaaattca-atttttagatttattcaataaatgatatatgt 741  Q
    |||||||||||||||| |||||||||  |||||||||| ||||| |||||||| |||||    
T  40100223 cggtcactattataagcaaaaattcatttttttagattcattcagtaaatgatgtatgt 40100165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 694 - 747
Target Start/End: Complemental strand, 5777306 - 5777253
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    ||||||||||||||||  ||||| ||| |||||||||||||| ||||| |||||    
T  5777306 tataagtaaaaattcatattttacattcattcaataaatgatgtatgttgtcta 5777253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 694 - 747
Target Start/End: Original strand, 30780084 - 30780137
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    |||||| |||||||||  ||||| |||||||||||||||||| ||||| |||||    
T  30780084 tataagcaaaaattcatattttaaatttattcaataaatgatgtatgttgtcta 30780137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 687 - 748
Target Start/End: Original strand, 40100094 - 40100155
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||| ||||||| | |||||| ||| ||| |||||||||| | ||||||||||    
T  40100094 tcactattataagcaaaaattgactttttaaattcatttaataaatgatgtgtgtggtctat 40100155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 1e-66; HSPs: 111)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 10424123 - 10424313
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10424123 ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 10424222  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10424223 aaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 10424313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 7e-65
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 21166424 - 21166233
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||| |||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21166424 aggtgccatttaatttgagaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 21166325  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21166324 caaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccactactaaatcacaaattcaa 21166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 7e-65
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 29651381 - 29651190
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||||||| |         |||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  29651381 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctct 29651282  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29651281 caaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 29651190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 26611332 - 26611141
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||| |||||||||||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26611332 aggtgtcatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 26611233  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26611232 caaccactagattatttttttatactatcttttacactctctctttcatgtccccacacactcataccaccaccactaaatcacaaattcaa 26611141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 1218 - 1398
Target Start/End: Original strand, 29650416 - 29650604
Alignment:
Q  1218 gtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 1308  Q
    |||||||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29650416 gtgccatttaatttgggaaatgagagttcttttccatcttgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 29650515  T
Q  1309 accactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||       ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  29650516 accactagattatttttttatactatctttcacactctctttttcatgtccccacaca-ccatacaaccaccactaaatcacaaattcaa 29650604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 1e-57
Query Start/End: Original strand, 1256 - 1398
Target Start/End: Original strand, 26610393 - 26610536
Alignment:
Q  1256 ttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnn-atactatctttcacactctctctttca 1354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  26610393 ttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattattttttttatactatctttcacactctctctttca 26610492  T
Q  1355 tgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  26610493 tgtccccacacacccataccaccaccactaaatcacaaattcaa 26610536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 1e-57
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Original strand, 39522374 - 39522565
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||| ||||||||||||||||||| |||||||||          |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39522374 aggtgtcatttaatttgggaaaggatagttctttttcaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctct 39522473  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39522474 caaccactagattatttttttatactatctttcgcactccctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 39522565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 4e-57
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 21165491 - 21165637
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||| ||||||||    
T  21165491 aaagttgatcatgtccatttgattaaatgaggaacatatttctatcatactctctcaaccactagattaattttttatactatctttcacagtctctctt 21165590  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21165591 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 21165637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 4e-57
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 45230409 - 45230555
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  45230409 aaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 45230508  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  45230509 tcatgtccccacacacccatacgaccaccactaaatcacaaattcaa 45230555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 10425108 - 10424917
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||| ||||||||||||||||| |         |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  10425108 aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaatatattcctatcatactctct 10425009  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  10425008 caaccactagattatttttttatattatctttcacactctctctttcatgtcccctcacacccataccaccaccactaaatcataaattcaa 10424917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 31835192 - 31835338
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  31835192 aaagttgattatgtccattagattaaacgaggaacatattcctatcatactctctcaaccactagattatctttttatactatctttcacactctctctt 31835291  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  31835292 tcatgtccccacacacccatatcaccactactaaatcacaaattcaa 31835338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 36865765 - 36865576
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||| |||||||||||||||||||||||||||| |         |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36865765 ggtgacatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 36865666  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       ||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  36865665 aaccactagattatttttttatactatcttttacactctctctttcatgtccccacaca-ccataccaccacaactaaatcacaaattcaa 36865576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 45236008 - 45235818
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||| ||||||||||||||| |         |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  45236008 ggtgccatttaatttggaaaaggagagttctttcccaccatgggaaagttaatcatgtccattagattaaatgaggaacatatttctatcatattctctc 45235909  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  45235908 aaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccacaaccactaaatcataaattcaa 45235818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1216 - 1371
Target Start/End: Original strand, 11417686 - 11417850
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11417686 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 11417785  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  11417786 caaccactagattatatttttatactatctttcacactctctctttcatgtccccacacacccat 11417850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 31836509 - 31836317
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||| |||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31836509 aggtgccatttaatttgagaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 31836410  T
Q  1307 caaccactagatta-nnnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||        ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  31836409 caaccactagattattttttttatattatctttcacactctctcttttatgcccccacacacccataccaccaccactaaatcacaaattcaa 31836317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 1218 - 1398
Target Start/End: Original strand, 36864818 - 36865005
Alignment:
Q  1218 gtgccatttaatttgggaaaggagagttcttt-tca--------aagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 1308  Q
    |||| ||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36864818 gtgctatttaatttgggaaaggagagttctttctcaccatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctca 36864917  T
Q  1309 accactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||       ||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  36864918 accactagattatttttttatactatctttcata--ctctctttcatgtccccacactcccataccaccaccactaaatcataaattcaa 36865005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 1215 - 1371
Target Start/End: Original strand, 9939123 - 9939285
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 1308  Q
    |||||| ||||||||||||||||| ||||||||||||      ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9939123 taggtgtcatttaatttgggaaagtagagttcttttctatgggaaagttgatcatgtccattagattaaatgagaaacatattcttatcatactctctca 9939222  T
Q  1309 accactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||||||||||       ||||||||||||||| |||||||||||| |||||||||||||||    
T  9939223 accactagattatttttttatactatctttcacattctctctttcatatccccacacacccat 9939285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 1252 - 1371
Target Start/End: Complemental strand, 38143741 - 38143622
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  38143741 aaagttggtcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 38143642  T
Q  1352 tcatgtccccacacacccat 1371  Q
    |||||||| |||||||||||    
T  38143641 tcatgtcctcacacacccat 38143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 1217 - 1371
Target Start/End: Complemental strand, 38695002 - 38694836
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  38695002 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatgtctattagattaaatgaggaaaatattcatatcatactctctc 38694903  T
Q  1308 aaccactagattannnnnnna---tactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    |||||||||||||       |   |||||||||||||||||||||||||||||||||||||||||||    
T  38694902 aaccactagattatttttttatactactatctttcacactctctctttcatgtccccacacacccat 38694836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Complemental strand, 11417985 - 11417873
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||| |||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11417985 ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 11417886  T
Q  1308 aaccactagatta 1320  Q
    |||||||||||||    
T  11417885 aaccactagatta 11417873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 1252 - 1320
Target Start/End: Original strand, 38143532 - 38143600
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagatta 1320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38143532 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagatta 38143600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1216 - 1320
Target Start/End: Complemental strand, 9939420 - 9939307
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||| |||||| ||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9939420 aggtgccatttaatttgagaaaggggagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 9939321  T
Q  1307 caaccactagatta 1320  Q
    ||||||||| ||||    
T  9939320 caaccactatatta 9939307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Original strand, 38694702 - 38694814
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||| ||||||||||||||| |         |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  38694702 ggtgccatttaatttggaaaaggagagttctttcccagcatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 38694801  T
Q  1308 aaccactagatta 1320  Q
    |||||||||||||    
T  38694802 aaccactagatta 38694814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 54164817 - 54164949
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| | || |||||||||| |||||||||||||| ||||||||||||||||| ||| | || ||| ||||||||||| ||||    
T  54164817 cggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttattgaatgaatc 54164916  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    |||||| |||| |||| ||||||| | ||||||    
T  54164917 taaaaaatagatttttgcttataatagtgaccg 54164949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 684 - 807
Target Start/End: Original strand, 19934642 - 19934765
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| | || |||||||||| |||||||||||||| ||||||||||||||||| ||| | || ||| ||||||||||| ||||    
T  19934642 cggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttattgaatgaatc 19934741  T
Q  784 taaaaagtagacttttacttataa 807  Q
    |||||| |||| |||| |||||||    
T  19934742 taaaaaatagatttttgcttataa 19934765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 684 - 816
Target Start/End: Complemental strand, 54164949 - 54164817
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  | |||||||||| |||||||||||||| ||||||||| ||| ||||||| | || ||| ||||||||||| ||||    
T  54164949 cggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatc 54164850  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||| || |||| ||||||| | ||||||    
T  54164849 taaaaagtggaattttgcttataatagtgaccg 54164817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 687 - 816
Target Start/End: Complemental strand, 19934771 - 19934642
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| ||||||  | |||||||||| |||||||||||||| ||||||||| ||| ||||||| | || ||| ||||||||||| |||||||    
T  19934771 tcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaa 19934672  T
Q  787 aaagtagacttttacttataacaatgaccg 816  Q
    ||||| || |||| ||||||| | ||||||    
T  19934671 aaagtggaattttgcttataatagtgaccg 19934642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 684 - 816
Target Start/End: Complemental strand, 29006971 - 29006839
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| | || |||||| ||| |||||||||||||| ||||||||||||||||| ||  | || ||| ||||||||||| ||||    
T  29006971 cggtcactattataagcaaaattccactttttaaattcattcaataaatgatgtatgtggtctatttaatggatcacatacatcatttattgaatgaatc 29006872  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    |||||| |||| |||| ||||||| | ||||||    
T  29006871 taaaaaatagatttttgcttataatagtgaccg 29006839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 29006839 - 29006971
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  | |||||||||| |||||||||||||| |||||| || ||| ||||||| | || ||| ||||||||||| |||     
T  29006839 cggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtgatccattaaatagaccacatacatcatttattgaatgaatt 29006938  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||| || |||| ||||||| | ||||||    
T  29006939 taaaaagtggaattttgcttataatagtgaccg 29006971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 706 - 789
Target Start/End: Complemental strand, 47397994 - 47397911
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    |||| ||||||| |||||||||||||||||||||||||||||||  |||||  | ||  |||||||||||||||||||||||||    
T  47397994 ttcattttttaggtttattcaataaatgatatatgtggtctattatatagatcacatatattatttattgaataaatctaaaaa 47397911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1217 - 1310
Target Start/End: Complemental strand, 39523319 - 39523217
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| | ||   || |||||||||||    
T  39523319 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgaggaatacatctttaccatactctctc 39523220  T
Q  1308 aac 1310  Q
    |||    
T  39523219 aac 39523217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 701 - 806
Target Start/End: Complemental strand, 12596795 - 12596690
Alignment:
Q  701 aaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagactttta 800  Q
    ||||||| | ||||||| || |||||||||||||||||||||||||||||||||| | | || ||||||||||| ||| ||| |||||| || | ||||     
T  12596795 aaaaatttactttttaggttcattcaataaatgatatatgtggtctatttaatagtccacatacattatttattaaatgaatttaaaaaataaatttttg 12596696  T
Q  801 cttata 806  Q
    ||||||    
T  12596695 cttata 12596690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1252 - 1382
Target Start/End: Complemental strand, 36451431 - 36451302
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||| ||||||||||||||||||||  |||| || | |||| ||||||||||| ||||||||||       | |||||||| |||  ||||||||    
T  36451431 aaagttgattatgtccattagattaaatgaaaaacaaatccttatcctactctctcaa-cactagattattgttttacactatcttccaccatctctctt 36451333  T
Q  1352 tcatgtccccacacacccataccaccaccac 1382  Q
    ||||||||||||| || |||||||| |||||    
T  36451332 tcatgtccccacatactcataccacaaccac 36451302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 683 - 791
Target Start/End: Original strand, 11796588 - 11796695
Alignment:
Q  683 tcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    ||||||||||||||||| |||| || | ||||| |||| ||||||| ||||||||||||||| ||| | |||||  | || ||| |||||||||||||||    
T  11796588 tcggtcactattataagcaaaagttgactttttcgattcattcaatgaatgatatatgtggtttatat-atagattacatacatcatttattgaataaat 11796686  T
Q  783 ctaaaaagt 791  Q
    |||||||||    
T  11796687 ctaaaaagt 11796695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 681 - 741
Target Start/End: Complemental strand, 11796723 - 11796663
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  11796723 cttcggccactattataagcaaaaattcactttttagatttattcaataaatgatgtatgt 11796663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 681 - 816
Target Start/End: Complemental strand, 4406380 - 4406245
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||| |||| ||||||||| ||||||| |  |||| |||| ||||||| |||||| |||||||||| | | |||||| | || ||| ||||| |||||||    
T  4406380 cttcagtcattattataagcaaaaatttatattttggattcattcaattaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataa 4406281  T
Q  781 atctaaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||| || || |||||||||||| | ||||||    
T  4406280 atctaaaatgttgatttttacttataatagtgaccg 4406245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 688 - 799
Target Start/End: Complemental strand, 6462844 - 6462733
Alignment:
Q  688 cactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaa 787  Q
    |||||||||||  |||| || | |||||||||| |||||||||||||| |||||| |||||||||| ||  | || ||| ||||||||||| || |||||    
T  6462844 cactattataaacaaaattttattttttagattcattcaataaatgatgtatgtgatctatttaatggatcacatacatcatttattgaatgaacctaaa 6462745  T
Q  788 aagtagactttt 799  Q
    ||||||| ||||    
T  6462744 aagtagattttt 6462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 681 - 791
Target Start/End: Complemental strand, 16667202 - 16667093
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||||||||||||||||||||||| || |  |||||  || |||||||||||||| ||||||||||||||| || |  | || ||| ||||||||||| |    
T  16667202 cttcggtcactattataagtaaaagttgacattttacgttcattcaataaatgatgtatgtggtctattta-taaattacatacatcatttattgaatca 16667104  T
Q  781 atctaaaaagt 791  Q
    |||||||||||    
T  16667103 atctaaaaagt 16667093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 681 - 807
Target Start/End: Original strand, 37255683 - 37255808
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||| |||||||||||||| |||| ||   |||||||||| |||||||||||||| |||||||||||| | ||| || | || ||| ||||||||||| |    
T  37255683 cttctgtcactattataagcaaaagttggttttttagattcattcaataaatgatgtatgtggtctatat-ataaactacatacataatttattgaatga 37255781  T
Q  781 atctaaaaagtagacttttacttataa 807  Q
    || ||||||||  |||||| |||||||    
T  37255782 atttaaaaagtgaacttttgcttataa 37255808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 711 - 789
Target Start/End: Original strand, 47397911 - 47397989
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||| | ||  || |||||||||||||| |||||||    
T  47397911 tttttagatttattcaataaataatatatgtgatctatataatagaccacatatatcatttattgaataaacctaaaaa 47397989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 684 - 748
Target Start/End: Original strand, 4406245 - 4406309
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||||||||||  |  ||||||||||||||| |||||||| ||||||||||||    
T  4406245 cggtcactattataagtaaaaatcaacattttagatttattcattaaatgatgtatgtggtctat 4406309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 20598365 - 20598289
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||| ||||||||||||||||||||||||| | |  |||||||||| ||| |||||||||||  ||||||||    
T  20598365 ttttagattcattcaataaatgatatatgtggtctttattgtagacaatatacatcatttattgaatgtatctaaaa 20598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 685 - 741
Target Start/End: Original strand, 22020121 - 22020177
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    ||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||    
T  22020121 ggtcactattataagcaaaagttcactttttagattcattcaataaatgatatatgt 22020177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 686 - 746
Target Start/End: Complemental strand, 35005189 - 35005129
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||||| || ||||||||||    
T  35005189 gtcactgttataagcaaaaattcaatttttagattcattcaataaataatgtatgtggtct 35005129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 682 - 789
Target Start/End: Original strand, 16039963 - 16040070
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    ||||||||| | |||||| ||||||||||||||||| || |||||||||||||  ||||||| ||||| ||||  | | || ||| ||||||||||| ||    
T  16039963 ttcggtcacgaatataagaaaaaattcaatttttaggttaattcaataaatgacgtatgtggactattaaatatgcgacatacatcatttattgaatgaa 16040062  T
Q  782 tctaaaaa 789  Q
    | ||||||    
T  16040063 tttaaaaa 16040070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 686 - 748
Target Start/End: Complemental strand, 6087567 - 6087505
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||| |||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  6087567 gtcacaattataagcaaaaatttaattttcagatttattcaataaatgatgtatgtagtctat 6087505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1252 - 1310
Target Start/End: Original strand, 11806135 - 11806193
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaac 1310  Q
    |||||| ||||||||||||||||||||||||||||| |||  |||| ||||||||||||    
T  11806135 aaagttaatcatgtccattagattaaatgaggaacacatttttatcctactctctcaac 11806193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 687 - 741
Target Start/End: Complemental strand, 26636573 - 26636519
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||| |||||    
T  26636573 tcactattataagtaaaaatttattttttagattcattcaataaatgatgtatgt 26636519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 685 - 819
Target Start/End: Complemental strand, 48806391 - 48806257
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||| |||||||||||||||| |  | ||||||| ||||||||||| ||||||||||||| |   ||||||   || ||| ||||||||||||||  |    
T  48806391 ggtcaccattataagtaaaaattgacatcttagattcattcaataaataatatatgtggtctttaatatagaccgcatacatcatttattgaataaactt 48806292  T
Q  785 aaaaagtagacttttacttataacaatgaccgaaa 819  Q
    |||| ||  | |||||||||||| ||||| |||||    
T  48806291 aaaatgttaaattttacttataataatgatcgaaa 48806257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 686 - 799
Target Start/End: Original strand, 4386329 - 4386441
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||| |||| || | |||||||||| ||| | |||||||| |||||||||||| | ||| || | ||  || ||||||||||| ||||||    
T  4386329 gtcactattataagcaaaagttgactttttagattaatttattaaatgatgtatgtggtctatat-ataaactacatagatcatttattgaatgaatcta 4386427  T
Q  786 aaaagtagactttt 799  Q
    ||||||| ||||||    
T  4386428 aaaagtaaactttt 4386441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 681 - 814
Target Start/End: Complemental strand, 4484213 - 4484080
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||| ||||||||||||||||||| ||    | |||||||| |||| |||||||| ||||||||||||   | |||| |||| ||| ||| ||||||| |    
T  4484213 cttcagtcactattataagtaaaattttgtatattagatttgttcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatga 4484114  T
Q  781 atctaaaaagtagacttttacttataacaatgac 814  Q
    |||||||| | | | |||||||||||| ||||||    
T  4484113 atctaaaatgcaaagttttacttataataatgac 4484080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 684 - 749
Target Start/End: Complemental strand, 34136666 - 34136601
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatt 749  Q
    ||||||||||||||||||||| |||| |||| || || |||||||||||||  |||||||||||||    
T  34136666 cggtcactattataagtaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatt 34136601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 691 - 799
Target Start/End: Original strand, 2253965 - 2254072
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaag 790  Q
    ||||||||  ||||||| | |||||||||||||||| |||||||| |||||||||||| | |||||| | ||  || ||||||||||| ||| ||||||     
T  2253965 tattataaacaaaaattaattttttagatttattcattaaatgatgtatgtggtctatat-atagactacatatatcatttattgaatgaatttaaaaaa 2254063  T
Q  791 tagactttt 799  Q
    || ||||||    
T  2254064 taaactttt 2254072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 689 - 789
Target Start/End: Complemental strand, 2254084 - 2253985
Alignment:
Q  689 actattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||||  |||| || | |||||| ||| |||||||||||||||||||| |||||| | |||||| | || ||| ||||| |||||||||||||||    
T  2254084 actattataaacaaaagtttattttttaaattcattcaataaatgatatatgtagtctatat-atagaccacatacatcatttaatgaataaatctaaaa 2253986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 4370536 - 4370432
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | ||||||||||||||||  |||||||||||| ||||||||||| ||||  |||||    | |||| |||| ||| ||||||||||| ||||    
T  4370536 cggtcacaaatataagtaaaaattcatattttagatttatgcaataaatgatgtatgatgtctacaataaagaccatatacatcatttattgaatgaatc 4370437  T
Q  784 taaaa 788  Q
    |||||    
T  4370436 taaaa 4370432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 12596680 - 12596812
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | |||||| ||||||| | |||||| ||| ||| ||||||| || ||||||| ||||| ||||||| | ||  || ||||||||||| || |    
T  12596680 cggtcacaaatataagcaaaaatttattttttaaattcatttaataaataatgtatgtggactattaaatagaccacatatatcatttattgaatgaacc 12596779  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||||||| | ||||  ||||| |||||||||    
T  12596780 taaaaagtaaatttttgtttatatcaatgaccg 12596812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 687 - 799
Target Start/End: Complemental strand, 14351396 - 14351284
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    |||||||||||| |||||||||| || |||| || ||||||||||||||||||||| || |    |||||| | || ||| ||||||||||| || |||     
T  14351396 tcactattataaataaaaattcatttgttaggttcattcaataaatgatatatgtgatcaacaatatagaccacatacatcatttattgaatgaagctat 14351297  T
Q  787 aaagtagactttt 799  Q
    ||| |||||||||    
T  14351296 aaaatagactttt 14351284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 685 - 789
Target Start/End: Complemental strand, 37255816 - 37255713
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| |||| |||| |||||| ||| ||||||||||| || ||||| || ||| | |||||| | || ||| ||||||||||| |||||    
T  37255816 ggtcactattataagcaaaagttcactttttaaattcattcaataaattatgtatgtagtttatat-atagaccacatacatcatttattgaatgaatct 37255718  T
Q  785 aaaaa 789  Q
    |||||    
T  37255717 aaaaa 37255713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 54106611 - 54106507
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | |||||| ||||||| |  ||||||||| |||||||||||||| |||||| ||| | |  ||||||| || ||| ||||||||||| ||||    
T  54106611 cggtcacaaatataagcaaaaatttatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgaatc 54106512  T
Q  784 taaaa 788  Q
    |||||    
T  54106511 taaaa 54106507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 693 - 748
Target Start/End: Complemental strand, 17658034 - 17657979
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||| || | |||||||||| |||||||||||||||||||| ||||||    
T  17658034 ttataagtaaaactttattttttagattcattcaataaatgatatatgtagtctat 17657979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 685 - 748
Target Start/End: Complemental strand, 52914133 - 52914070
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||| ||||||| |  ||||||||| ||||| |||||||| ||||||||||||    
T  52914133 ggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctat 52914070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 684 - 742
Target Start/End: Complemental strand, 5281271 - 5281213
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    ||||||||| |||||||||||||||| |||||||||  ||||||| |||||| ||||||    
T  5281271 cggtcactaatataagtaaaaattcactttttagatacattcaattaatgatgtatgtg 5281213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 687 - 789
Target Start/End: Complemental strand, 5535846 - 5535745
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| ||||||| | || |||| || ||||||||| |||| |||||||||||| | ||| || | || ||| ||||||||||| |||||||    
T  5535846 tcactattataagcaaaaattgacttgttaggttcattcaataactgatgtatgtggtctatat-ataaactacatacatcatttattgaatgaatctaa 5535748  T
Q  787 aaa 789  Q
    |||    
T  5535747 aaa 5535745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 686 - 732
Target Start/End: Complemental strand, 9993578 - 9993532
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaat 732  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||    
T  9993578 gtcactattataaacaaaaattcactttttagatttattcaataaat 9993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 687 - 788
Target Start/End: Original strand, 18626716 - 18626815
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| ||||||| |  ||||||||| ||||| |||||||| |||||||| |||   | |||  |||||||| ||| |||||||||||||||    
T  18626716 tcactattataagcaaaaattaa--ttttagattcattcattaaatgatgtatgtggtttataataaagatcatatgcatcattaattgaataaatctaa 18626813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 684 - 746
Target Start/End: Original strand, 20215571 - 20215633
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    |||||||||||||||| ||||||| |  |||||| || |||||||||||||| ||||||||||    
T  20215571 cggtcactattataagcaaaaattgacattttaggttcattcaataaatgatgtatgtggtct 20215633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 681 - 735
Target Start/End: Complemental strand, 46518559 - 46518505
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    ||||||||| ||||||||| ||||||| | ||||||| |||||||||||||||||    
T  46518559 cttcggtcattattataagcaaaaattaactttttaggtttattcaataaatgat 46518505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 714 - 815
Target Start/End: Complemental strand, 2401146 - 2401045
Alignment:
Q  714 ttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaatga 813  Q
    ||||||||||||| |||||||| ||| | |||||| | || ||| | || ||| ||||||||||| ||| ||||||||  |||||| ||||||| |||||    
T  2401146 ttagatttattcattaaatgatgtatttagtctatattattgaccaaatacatcatttattgaatgaatttaaaaagttaacttttgcttataataatga 2401047  T
Q  814 cc 815  Q
    ||    
T  2401046 cc 2401045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 693 - 806
Target Start/End: Original strand, 3740322 - 3740434
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    ||||||| ||||| |||  |||||  |||||| |||||||||| ||| |||||||| || ||||| | |||||| ||||||||||| || |||||||||     
T  3740322 ttataagcaaaaaatcaccttttaagtttattaaataaatgatgtatctggtctatata-tagactacatgcatcatttattgaatgaacctaaaaagtc 3740420  T
Q  793 gacttttacttata 806  Q
     |||||| ||||||    
T  3740421 aacttttgcttata 3740434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 691 - 748
Target Start/End: Original strand, 16912450 - 16912507
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||| |  |||||||||||| |||||||||||||| ||||| ||||||    
T  16912450 tattataagtaaaagtgtaatttttagattcattcaataaatgatgtatgtagtctat 16912507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 711 - 792
Target Start/End: Complemental strand, 25700566 - 25700485
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    |||||||||| |||||||||||||| |||||||||||| |  ||||  | || ||| ||||| ||||| |||||||||||||    
T  25700566 tttttagattcattcaataaatgatgtatgtggtctatattgtagatcacatacatcatttactgaatgaatctaaaaagta 25700485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 789
Target Start/End: Original strand, 31280337 - 31280442
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||   || |||||||||| |||||||||||| || |||||| |||  |||||||| | || ||| ||||||| ||| || |    
T  31280337 cggtcactattataagcaaaacaccattttttagattcattcaataaatggtacatgtggcctacataatagactacattcatcatttattaaatgaacc 31280436  T
Q  784 taaaaa 789  Q
    ||||||    
T  31280437 taaaaa 31280442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 682 - 807
Target Start/End: Original strand, 48806258 - 48806383
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    |||| ||| |||||||||||||| || |  |||||  ||||||||||||||||| |||| ||||||| | | |||| | ||  |||||||||||||| ||    
T  48806258 ttcgatcattattataagtaaaatttaacattttaagtttattcaataaatgatgtatgcggtctatattaaagaccacatatattatttattgaatgaa 48806357  T
Q  782 tctaaaaagtagacttttacttataa 807  Q
    ||||| | ||  | ||||||||||||    
T  48806358 tctaagatgtcaatttttacttataa 48806383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 55936123 - 55936019
Alignment:
Q  684 cggtcactattataagtaaaaattcaat-ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    |||||||||||||||| ||||| ||||| ||||||||| ||||| |||||||| ||||||||| ||   | |||| |||| ||| ||||| ||||| |||    
T  55936123 cggtcactattataagcaaaaa-tcaatattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaat 55936025  T
Q  783 ctaaaa 788  Q
    ||||||    
T  55936024 ctaaaa 55936019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 10424419 - 10424387
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  10424419 ggtgccatttaatttgggaaaggagagttcttt 10424387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 748
Target Start/End: Complemental strand, 20788171 - 20788107
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||| ||||||||| ||| ||| || ||||| |||||| | ||||||||||||    
T  20788171 cggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 20788107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Original strand, 21166137 - 21166169
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  21166137 ggtgccatttaatttgggaaaggagagttcttt 21166169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 29650689 - 29650657
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  29650689 ggtgccatttaatttgggaaaggagagttcttt 29650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Original strand, 31836221 - 31836253
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  31836221 ggtgccatttaatttgggaaaggagagttcttt 31836253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Original strand, 33558801 - 33558905
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | |||||  |||||||||  |||||||||||| ||||||||||||||||| ||||     | |||| | || ||| ||||||||||||||||    
T  33558801 cggtcacaaatataaccaaaaattcatattttagatttatacaataaatgatatatgttgtctgcaataaagaccacatacatcatttattgaataaatc 33558900  T
Q  784 taaaa 788  Q
    |||||    
T  33558901 taaaa 33558905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 33558905 - 33558829
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||||||||||||||||||||| |||||||||| | |   |||||| ||  || |||||||| ||||||||||||    
T  33558905 ttttagatttattcaataaatgatgtatgtggtctttattgcagacaacatatatcatttattgtataaatctaaaa 33558829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Original strand, 45235733 - 45235765
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  45235733 ggtgccatttaatttgggaaaggagagttcttt 45235765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 681 - 744
Target Start/End: Original strand, 12912610 - 12912673
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    ||||| ||| ||||||||||||||||| |  ||||||||||||||| |||||||| ||| ||||    
T  12912610 cttcgatcattattataagtaaaaattaacattttagatttattcattaaatgatgtatatggt 12912673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 685 - 748
Target Start/End: Original strand, 15659940 - 15660003
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||| ||| |||| |||| ||||||| || |||||||||||||| ||||| ||||||    
T  15659940 ggtcactattacaagcaaaagttcactttttaggttcattcaataaatgatgtatgtagtctat 15660003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 681 - 740
Target Start/End: Complemental strand, 28815922 - 28815863
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatg 740  Q
    ||||||||||||||||||| |||| || | ||||||| || ||| |||||||||||||||    
T  28815922 cttcggtcactattataagcaaaagttgactttttaggttcatttaataaatgatatatg 28815863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 681 - 744
Target Start/End: Complemental strand, 40814808 - 40814745
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    ||||||||||| ||||||  ||||||| |  ||||||||| ||||| |||||||||||||||||    
T  40814808 cttcggtcactgttataaacaaaaattaacattttagattcattcattaaatgatatatgtggt 40814745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 747
Target Start/End: Original strand, 54106479 - 54106542
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    ||||||| | |||||| |||||||||  ||||||||| |||||||||||||| ||||| |||||    
T  54106479 cggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtcta 54106542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 685 - 791
Target Start/End: Original strand, 2401045 - 2401151
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||| ||||||||| |||| || | |||||| ||| |||||||||||||| ||| ||||| ||   |||||| | || ||| ||||| |||||||||||    
T  2401045 ggtcattattataagcaaaagttaactttttaaattcattcaataaatgatgtatttggtcaataatatagactaaatacatcatttaatgaataaatct 2401144  T
Q  785 aaaaagt 791  Q
    || ||||    
T  2401145 aataagt 2401151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 686 - 816
Target Start/End: Original strand, 3094273 - 3094402
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||  ||||||| | |||||| ||| |||||||||||||| ||| |||||||  | |||||| | || | | ||||||||||| || |||    
T  3094273 gtcactattataaacaaaaatttattttttatattcattcaataaatgatgtatatggtctacgt-atagactacatacgtcatttattgaatgaaccta 3094371  T
Q  786 aaaagtagacttttacttataacaatgaccg 816  Q
    ||||||  ||||||  |||||| | ||||||    
T  3094372 aaaagtcaacttttggttataatagtgaccg 3094402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 788
Target Start/End: Original strand, 4370414 - 4370508
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||| |||||| ||  ||||||||| |||||||||||||| ||| |||||| | |  ||||||  || ||| |||||||| ||||||||||||    
T  4370414 tataagcaaaaatccatattttagattcattcaataaatgatgtatatggtctttattgtagacatcatacatcatttattgcataaatctaaaa 4370508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 687 - 741
Target Start/End: Original strand, 5535721 - 5535775
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    |||||| |||||| ||||| ||| |||||||||| |||||||||||||| |||||    
T  5535721 tcactagtataagcaaaaactcattttttagattcattcaataaatgatgtatgt 5535775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 711 - 789
Target Start/End: Original strand, 6462743 - 6462821
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    ||||||| || |||||||||||||| |||||| || ||| ||||||  | || ||| ||||||||||| ||||||||||    
T  6462743 tttttaggttcattcaataaatgatgtatgtgatccattaaatagatcacatacatcatttattgaatgaatctaaaaa 6462821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 681 - 735
Target Start/End: Original strand, 12168635 - 12168689
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    ||||||||||||||||||||||||||| || ||||| ||| || |||| ||||||    
T  12168635 cttcggtcactattataagtaaaaatttaaattttaaattcatacaattaatgat 12168689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 818
Target Start/End: Original strand, 16667068 - 16667201
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| |||||||  |||| || | |||||||||| |||||||||||||| |||||  | || | ||||||| | || ||| ||||||||||| ||      
T  16667068 cggtcacaattataaacaaaagttaactttttagattgattcaataaatgatgtatgtaattta-taaatagaccacatacatcatttattgaatgaacg 16667166  T
Q  784 taaaaagtagacttttacttataacaatgaccgaa 818  Q
    ||||| ||  |||||||||||||| | ||||||||    
T  16667167 taaaatgtcaacttttacttataatagtgaccgaa 16667201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 17657995 - 17658045
Alignment:
Q  768 atttattgaataaatctaaaaagtagacttttacttataacaatgaccgaa 818  Q
    ||||||||||| |||||||||| || | |||||||||||||||||| ||||    
T  17657995 atttattgaatgaatctaaaaaataaagttttacttataacaatgatcgaa 17658045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 794
Target Start/End: Original strand, 20814533 - 20814643
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||| ||||||||| |||  || | ||||||| || ||||||||||||||  ||||| ||||     ||||| | |||||| ||||||||||| ||||    
T  20814533 cggtcattattataagcaaattttgactttttaggttcattcaataaatgatgcatgtgatctacaatctagaccacatgcatcatttattgaatgaatc 20814632  T
Q  784 taaaaagtaga 794  Q
    |||||||||||    
T  20814633 taaaaagtaga 20814643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 693 - 791
Target Start/End: Original strand, 21586931 - 21587029
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    ||||||| |||| || | ||||||| |  |||||||||||||| ||||||  |||| | |||||| | || ||| ||||||||||| ||||||||||||    
T  21586931 ttataagcaaaagtttattttttaggtaaattcaataaatgatgtatgtgtcctatattatagactacatacatcatttattgaatgaatctaaaaagt 21587029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 742
Target Start/End: Original strand, 29223946 - 29224004
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    |||| |||| |||||| |||||| || ||||||||| |||||||| |||||||||||||    
T  29223946 cggttactaatataagcaaaaatccattttttagatatattcaattaatgatatatgtg 29224004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 691 - 741
Target Start/End: Complemental strand, 36688478 - 36688428
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    |||||||| ||||| |||| |||||| ||| ||||||||||||||||||||    
T  36688478 tattataaataaaatttcactttttaaattcattcaataaatgatatatgt 36688428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 768 - 818
Target Start/End: Complemental strand, 54057695 - 54057645
Alignment:
Q  768 atttattgaataaatctaaaaagtagacttttacttataacaatgaccgaa 818  Q
    ||||||||||| ||||||||| ||||| ||||| |||||||| ||||||||    
T  54057695 atttattgaatgaatctaaaacgtagatttttatttataacagtgaccgaa 54057645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 711 - 816
Target Start/End: Complemental strand, 20814638 - 20814533
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaa 810  Q
    |||||||||| ||||||||||||||  ||||||||||  |  ||||  | |||||| ||||||||||| || |||||||||  |  ||| ||||||| ||    
T  20814638 tttttagattcattcaataaatgatgcatgtggtctagattgtagatcacatgcatcatttattgaatgaacctaaaaagtcaaaatttgcttataataa 20814539  T
Q  811 tgaccg 816  Q
    ||||||    
T  20814538 tgaccg 20814533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 684 - 789
Target Start/End: Original strand, 21859486 - 21859591
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||| |||||  |||||||  ||||||||||| ||||| |||||||| ||||| |||| | | |||| | | || | ||||||| ||||| ||||    
T  21859486 cggtcactaatataaacaaaaatttgatttttagattcattcattaaatgatgtatgtagtctttattatagtctacatacgttatttaatgaatgaatc 21859585  T
Q  784 taaaaa 789  Q
    ||||||    
T  21859586 taaaaa 21859591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 684 - 789
Target Start/End: Original strand, 21915349 - 21915454
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||| |||||  |||||||  ||||||||||| ||||| |||||||| ||||| |||| | | |||| | | || | ||||||| ||||| ||||    
T  21915349 cggtcactaatataaacaaaaatttgatttttagattcattcattaaatgatgtatgtagtctttattatagtctacatacgttatttaatgaatgaatc 21915448  T
Q  784 taaaaa 789  Q
    ||||||    
T  21915449 taaaaa 21915454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 691 - 788
Target Start/End: Complemental strand, 24275345 - 24275249
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||||||||||  || |||||||| ||| ||||||| |||||| ||||||||||||    ||||| |||| ||| ||| ||||||| |||||||||    
T  24275345 tattataagtaaatttt-aatttttaaattcattcaattaatgatgtatgtggtctataatgtagaccatatacataattaattgaatgaatctaaaa 24275249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 711 - 744
Target Start/End: Original strand, 26206625 - 26206658
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggt 744  Q
    |||||||||||||||||| |||||||||||||||    
T  26206625 tttttagatttattcaattaatgatatatgtggt 26206658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 685 - 746
Target Start/End: Complemental strand, 31262729 - 31262668
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    ||||||||||||||| |||| || |  ||||||||| |||| ||||||||||||||| ||||    
T  31262729 ggtcactattataagcaaaatttgacattttagattcattcgataaatgatatatgtagtct 31262668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 687 - 744
Target Start/End: Complemental strand, 32599613 - 32599556
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    ||||||||||||||||||||| |  ||||||||| ||| | |||||||| ||||||||    
T  32599613 tcactattataagtaaaaattaatattttagattcatttattaaatgatgtatgtggt 32599556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 682 - 734
Target Start/End: Original strand, 36869974 - 36870027
Alignment:
Q  682 ttcggtcactattataag-taaaaattcaatttttagatttattcaataaatga 734  Q
    ||||||||||| |||||| ||||| || |||||||||||| |||||||||||||    
T  36869974 ttcggtcactaatataagctaaaagtttaatttttagattcattcaataaatga 36870027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 687 - 748
Target Start/End: Original strand, 40952355 - 40952416
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||| || |||  |  ||||||||| ||||| |||||||||||||||||||||    
T  40952355 tcactattataagcaataatcaacattttagattcattcattaaatgatatatgtggtctat 40952416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 711 - 792
Target Start/End: Original strand, 51126136 - 51126217
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    ||||||| || ||||||| |||||| |||||||||||| | |||||| | || ||| ||| ||||||| || ||||||||||    
T  51126136 tttttaggttcattcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaatgaacctaaaaagta 51126217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 685 - 826
Target Start/End: Original strand, 56364331 - 56364472
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||| |||||||||| ||||||  |  ||||||||  ||||| |||||||| ||||| |||| | | ||| ||   || ||| ||||| ||||| |||||    
T  56364331 ggtcgctattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatct 56364430  T
Q  785 aaaaagtagacttttacttataacaatgaccgaaagatgcat 826  Q
    |||| ||||| |||||||||||| | |||||| | |||||||    
T  56364431 aaaatgtagatttttacttataatagtgaccggaggatgcat 56364472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 2e-65; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 1215 - 1398
Target Start/End: Original strand, 21471015 - 21471207
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    ||||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21471015 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctc 21471114  T
Q  1306 tcaaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||| |||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21471115 tcagccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 21471207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 21472002 - 21471812
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21472002 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 21471903  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21471902 aaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccaccaaatcacaaattcaa 21471812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 7e-62
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Original strand, 37547997 - 37548190
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37547997 aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 37548096  T
Q  1307 caaccactagattannnnnnnatactatctttcaca--ctctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       |||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37548097 caaccactagattatttttttataccatctttcacactctctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 37548190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 5e-44
Query Start/End: Original strand, 1216 - 1371
Target Start/End: Original strand, 38834386 - 38834550
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||| || |||| |         ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  38834386 aggtgccatttaatttgggaaaggagggtactttcccaccacgggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctct 38834485  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  38834486 caaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccat 38834550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 1213 - 1319
Target Start/End: Complemental strand, 14574051 - 14573936
Alignment:
Q  1213 cataggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactc 1303  Q
    ||||||||||||||||||||||||||||||||||||| |         |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  14574051 cataggtgccatttaatttgggaaaggagagttctttcccaccataagaaagttgatcatatccattagattaaatgagaaacatattcctatcatactc 14573952  T
Q  1304 tctcaaccactagatt 1319  Q
    ||||||||||||||||    
T  14573951 tctcaaccactagatt 14573936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 1217 - 1343
Target Start/End: Original strand, 13134318 - 13134453
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||    
T  13134318 ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattaaattaaatgaggaacatatttctatcatactctatc 13134417  T
Q  1308 aaccactagattannnnnnnatactatctttcacac 1343  Q
    |||||||||||||       ||||||||||||||||    
T  13134418 aaccactagattatttttttatactatctttcacac 13134453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1216 - 1320
Target Start/End: Complemental strand, 38834685 - 38834572
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||| ||| |         |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  38834685 aggtgccatttaatttgggaaaggagagttttttcctaccgtgggaaagttgatcatgtccattagattaaatgaagaacatatttctatcatactctct 38834586  T
Q  1307 caaccactagatta 1320  Q
    ||||||||||||||    
T  38834585 caaccactagatta 38834572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 681 - 816
Target Start/End: Original strand, 15119778 - 15119913
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||||||||||||||| ||||||| |  ||||||||| ||||| |||||||| ||||||||||||   | ||||||||| ||| ||| | |||||||    
T  15119778 cttcggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctataataaagacaatatacatcattaaatgaataa 15119877  T
Q  781 atctaaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||| ||||| |||| ||||||| | ||||||    
T  15119878 atctaaaatgtagatttttgcttataatagtgaccg 15119913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 1217 - 1307
Target Start/End: Complemental strand, 4479750 - 4479651
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt-tca--------aagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |||        ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4479750 ggtgccatttaatttgggaaaggagagttctttctcaccatgggaaagttaatcatgtccattagattaaatgaggaacatattcttatcatactctctc 4479651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Original strand, 14573261 - 14573372
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  14573261 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctc 14573360  T
Q  1308 aaccactagatta 1320  Q
    || ||||||||||    
T  14573361 aa-cactagatta 14573372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 684 - 789
Target Start/End: Complemental strand, 41824396 - 41824292
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||| |||||||||||||| | ||||||| || |||||||||||||| |||||||||||| | ||| || | || ||| ||||||||||| ||||    
T  41824396 cggtcactactataagtaaaaattgactttttaggttcattcaataaatgatgtatgtggtctatat-ataaactacatacataatttattgaatgaatc 41824298  T
Q  784 taaaaa 789  Q
    ||||||    
T  41824297 taaaaa 41824292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 687 - 806
Target Start/End: Original strand, 41824268 - 41824386
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||| || ||||| || ||| | |||||| | || ||| ||||||||||| || ||||    
T  41824268 tcactattataagcaaaaattcattttttagattcattcaataaattatgtatgtagtttatat-atagaccacatacatcatttattgaatgaacctaa 41824366  T
Q  787 aaagtagacttttacttata 806  Q
    |||||  | |||||||||||    
T  41824367 aaagtcaatttttacttata 41824386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 682 - 799
Target Start/End: Original strand, 25272344 - 25272460
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    ||||||||||||||||| ||||| || | |||| || ||  |||||||||| |||||||||||||| ||||||||  |||| ||| ||||||| ||||||    
T  25272344 ttcggtcactattataaataaaattttacttttaag-ttcgttcaataaataatatatgtggtctacttaatagattatatacataatttattaaataaa 25272442  T
Q  782 tctaaaaagtagactttt 799  Q
      ||||||||||| ||||    
T  25272443 cttaaaaagtagattttt 25272460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 44274546 - 44274677
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||  |||| || |  ||||||||| |||||||||||||||||||| |||||| | | |||| | || ||| ||||||||||| ||||    
T  44274546 cggtcactattataaacaaaagttgacattttagattcattcaataaatgatatatgtagtctatat-acagactacatacatcatttattgaatgaatc 44274644  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||||||  | |||| |||||| || ||||||    
T  44274645 taaaaagtgaatttttgcttatatcagtgaccg 44274677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 685 - 820
Target Start/End: Complemental strand, 32630541 - 32630406
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||||||||| |||||||  |  ||||||||||||||| |||||||| ||||| ||||||   | |||| |||| ||| ||| ||||||| ||||     
T  32630541 ggtcactattataaataaaaatcaacattttagatttattcattaaatgatgtatgtagtctataataaagaccatatacatcattaattgaatgaatcc 32630442  T
Q  785 aaaaagtagacttttacttataacaatgaccgaaag 820  Q
    |||| ||||| ||||  |||||| |||||| |||||    
T  32630441 aaaatgtagatttttgtttataataatgactgaaag 32630406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 682 - 748
Target Start/End: Original strand, 45472412 - 45472478
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||| ||||||||||||||||||||| | |||||| ||| |||||||||||||| ||||| ||||||    
T  45472412 ttcgatcactattataagtaaaaatttactttttaaattcattcaataaatgatgtatgtagtctat 45472478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 3124039 - 3123935
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | |||||| |||||||||  ||||||||| |||||||||||||| ||||| | || | |  ||||||| || ||| ||||||||||| ||||    
T  3124039 cggtcacaaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgtagactttattgtagacaacatacatcatttattgaatgaatc 3123940  T
Q  784 taaaa 788  Q
    |||||    
T  3123939 taaaa 3123935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 804
Target Start/End: Original strand, 38465793 - 38465913
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  ||||||||| ||||| |||||||| ||||||||| ||   | |||| |||| ||| ||| ||||||| ||||    
T  38465793 cggtcactattataagcaaaaatcaacattttagattaattcattaaatgatgtatgtggtccataataaagaccatatacatcattaattgaatgaatc 38465892  T
Q  784 taaaaagtagacttttactta 804  Q
    ||||| ||||| |||| ||||    
T  38465893 taaaatgtagatttttgctta 38465913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 44274677 - 44274574
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||  |||||| ||||||||| |||||||||| |||||||||||||| ||||| |||| | | |||||| | ||  || ||||||||||| ||||    
T  44274677 cggtcactgatataagcaaaaattcactttttagattcattcaataaatgatgtatgtagtctgtat-atagactacatatatcatttattgaatgaatc 44274579  T
Q  784 taaaa 788  Q
    |||||    
T  44274578 taaaa 44274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 684 - 807
Target Start/End: Complemental strand, 14952901 - 14952778
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||| ||||||| |||| || | |||||   || ||||| |||||||| |||||| ||||||  |||||| | |||||| ||||||||||| |||     
T  14952901 cggtcactcttataagcaaaatttgacttttttagttcattcattaaatgatgtatgtgatctattatatagactacatgcatcatttattgaatgaatt 14952802  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||||| | |||||| |||||||    
T  14952801 taaaaagcaaacttttgcttataa 14952778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 684 - 823
Target Start/End: Original strand, 15446783 - 15446921
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||||| |||||| ||| |||||||  || ||  ||||||| ||| |||||||| |||| ||| ||||| | ||| || |    
T  15446783 cggtcactattataagcaaaaattcattttttaaattcattcaat-gataatgaatgtggtatatataatagactatatacatcatttaataaatgaacc 15446881  T
Q  784 taaaaagtagacttttacttataacaatgaccgaaagatg 823  Q
    |||||| |  | |||||||||||| | |||||||| ||||    
T  15446882 taaaaaatgaatttttacttataatagtgaccgaatgatg 15446921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 682 - 749
Target Start/End: Complemental strand, 15446916 - 15446849
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatt 749  Q
    |||||||||||||||||||||||||||| ||||||| || ||| | |||||||| ||| | |||||||    
T  15446916 ttcggtcactattataagtaaaaattcattttttaggttcatttattaaatgatgtatatagtctatt 15446849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 816
Target Start/End: Original strand, 23143487 - 23143622
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||||||||||||||| ||||||  | ||||||| || | | |||||||||| ||| || ||||  | || ||| | || ||| |||||||||||||    
T  23143487 cttcggtcactattataagcaaaaatcaactttttaggttcacttaataaatgatgtatttgatctacattatggaccaaatacatcatttattgaataa 23143586  T
Q  781 atctaaaaagtagacttttacttataacaatgaccg 816  Q
    | ||||||||| || |||| ||||||| | ||||||    
T  23143587 acctaaaaagttgatttttgcttataatagtgaccg 23143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 816
Target Start/End: Original strand, 23555277 - 23555412
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||||||||||||||| ||||||  | ||||||| || | | |||||||||| ||| || ||||  | || ||| | || ||| |||||||||||||    
T  23555277 cttcggtcactattataagcaaaaatcaactttttaggttcacttaataaatgatgtatttgatctacattatggaccaaatacatcatttattgaataa 23555376  T
Q  781 atctaaaaagtagacttttacttataacaatgaccg 816  Q
    | ||||||||| || |||| ||||||| | ||||||    
T  23555377 acctaaaaagttgatttttgcttataatagtgaccg 23555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 685 - 807
Target Start/End: Complemental strand, 1961444 - 1961322
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||  |  ||||||||| ||||| |||||||| ||||||||||||   | |||| |||| ||| ||| ||| || ||||||    
T  1961444 ggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattaaacaaatct 1961345  T
Q  785 aaaaagtagacttttacttataa 807  Q
    |||| ||| | |||| |||||||    
T  1961344 aaaatgtaaatttttgcttataa 1961322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 687 - 748
Target Start/End: Original strand, 11093537 - 11093598
Alignment:
Q  687 tcactattataagtaaaaattcaat-ttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||||||| ||||| ||||||||| ||||| |||||||| ||||||||||||    
T  11093537 tcactattataagtaaaaa-tcaatattttagattgattcattaaatgatgtatgtggtctat 11093598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 711 - 789
Target Start/End: Original strand, 18731302 - 18731379
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    ||||||| || |||||||||||||| |||||| ||||| | |||||| | || ||||||||||||||| ||||||||||    
T  18731302 tttttaggttgattcaataaatgatgtatgtgatctatgt-atagactacatacattatttattgaatgaatctaaaaa 18731379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 685 - 747
Target Start/End: Complemental strand, 43714183 - 43714121
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    |||| ||||||||||  |||||||| |||||||||| |||||||||||||| ||| |||||||    
T  43714183 ggtctctattataagagaaaattcactttttagattcattcaataaatgatttatatggtcta 43714121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1216 - 1249
Target Start/End: Complemental strand, 1164825 - 1164792
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttt 1249  Q
    ||||||||||||||||||||||||||||||||||    
T  1164825 aggtgccatttaatttgggaaaggagagttcttt 1164792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 745
Target Start/End: Complemental strand, 23143622 - 23143561
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtc 745  Q
    |||||||||||||||| ||||||  | ||||||| ||||||||||||||||| ||| |||||    
T  23143622 cggtcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtatttggtc 23143561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 684 - 745
Target Start/End: Complemental strand, 23555412 - 23555351
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtc 745  Q
    |||||||||||||||| ||||||  | ||||||| ||||||||||||||||| ||| |||||    
T  23555412 cggtcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtatttggtc 23555351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 711 - 792
Target Start/End: Complemental strand, 43341238 - 43341157
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    |||||||||| ||| |||||||||||||||| ||  || | ||| || | |||||| ||||||||||| |||||||||||||    
T  43341238 tttttagattcatttaataaatgatatatgtagttcatattataaaccacatgcatcatttattgaatgaatctaaaaagta 43341157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 681 - 746
Target Start/End: Original strand, 43426629 - 43426694
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    |||||||||||| ||||||||||||| || |||||| ||  ||||||| |||||| ||||||||||    
T  43426629 cttcggtcactaatataagtaaaaatccactttttaaatacattcaattaatgatgtatgtggtct 43426694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 687 - 807
Target Start/End: Original strand, 1961316 - 1961436
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| ||||||| |  |||||||||| || ||| |||||| ||| |||||| | | |||||| | || ||| ||||| ||||| |||||||    
T  1961316 tcactattataagcaaaaatttacattttagatttgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatctaa 1961415  T
Q  787 aaagtagacttttacttataa 807  Q
    || || || |||| |||||||    
T  1961416 aatgttgatttttgcttataa 1961436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 686 - 807
Target Start/End: Complemental strand, 23738454 - 23738332
Alignment:
Q  686 gtcactattataagtaaaaa--ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||| |||||  || |  |||||| ||||||||||||||||| |||| ||||||| | | |||| ||| |||| ||||||| ||| ||||    
T  23738454 gtcactattataagcaaaaaatttaacattttaggtttattcaataaatgatgtatgcggtctatattaaagactata-gcatcatttattaaatgaatc 23738356  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||| ||  | ||||||||||||    
T  23738355 taaaatgtcaatttttacttataa 23738332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 748
Target Start/End: Complemental strand, 26229581 - 26229517
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||| ||||||||| ||||||| || ||||| |||||  | ||||||||||||    
T  26229581 cggtcactattataagcaaaaattcattttttaggttcattcattaaatattgtatgtggtctat 26229517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 27331895 - 27331791
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  ||||||||| ||||||| |||||| ||||| |||| | | ||| |||||||  |||||||| ||||| |||     
T  27331895 cggtcactattataagcaaaaatcaacattttagattcattcaattaatgatgtatgtagtctttattataaacaatatatattatttaatgaatgaatt 27331796  T
Q  784 taaaa 788  Q
    |||||    
T  27331795 taaaa 27331791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 748
Target Start/End: Original strand, 27964288 - 27964352
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||| ||||||| ||||||| | ||||||| || ||||||||||| || ||||||||||||    
T  27964288 cggtcacttttataagcaaaaattgactttttaggttcattcaataaattatgtatgtggtctat 27964352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 686 - 746
Target Start/End: Complemental strand, 30902407 - 30902347
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    ||||||| |||||| ||||||| | |||||||||  ||||||| |||||||||||||||||    
T  30902407 gtcactaatataagcaaaaatttactttttagatacattcaattaatgatatatgtggtct 30902347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Original strand, 31024175 - 31024279
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  ||||||||| ||||| |||||||| ||||||||| ||   | |||| |||| ||| ||||| ||||| ||||    
T  31024175 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatc 31024274  T
Q  784 taaaa 788  Q
    |||||    
T  31024275 taaaa 31024279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 748
Target Start/End: Original strand, 32316422 - 32316486
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||| ||||||||| ||| ||| || ||||| |||||| | ||||||||||||    
T  32316422 cggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 32316486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 687 - 746
Target Start/End: Complemental strand, 15900352 - 15900293
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    |||||||||||| |||||||| |  ||||| ||||||| |||||||||| ||||||||||    
T  15900352 tcactattataaataaaaattaatattttacatttatttaataaatgatgtatgtggtct 15900293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 687 - 806
Target Start/End: Complemental strand, 18479453 - 18479335
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||||||||||| | ||||||  || ||||||| || |||||||||| ||| | | |||||| | ||  ||||||||   |||||||||||    
T  18479453 tcactattataagtaaaaatt-actttttatcttcattcaattaacgatatatgtgatctttattatagaccacatatattatttaacaaataaatctaa 18479355  T
Q  787 aaagtagacttttacttata 806  Q
    || || || |||||||||||    
T  18479354 aatgttgatttttacttata 18479335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 691 - 742
Target Start/End: Complemental strand, 31571087 - 31571036
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    ||||||||||||||||| |  ||||||||||||| ||||| |||||||||||    
T  31571087 tattataagtaaaaatttaccttttagatttattgaataattgatatatgtg 31571036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 687 - 778
Target Start/End: Complemental strand, 43893249 - 43893159
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaat 778  Q
    |||||||||||| |||||||||||||| ||  || |||||||||||| | ||| |||||||| | |||||  |||| ||| |||||||||||    
T  43893249 tcactattataaataaaaattcaatttataagttcattcaataaatggtgtatatggtctatat-atagatcatatacatcatttattgaat 43893159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 680 - 746
Target Start/End: Complemental strand, 323605 - 323539
Alignment:
Q  680 acttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    ||||||||||| |  ||||| |||| |  |||||||||||||||||||||||| || ||||||||||    
T  323605 acttcggtcaccaaaataagcaaaactaaaatttttagatttattcaataaattatctatgtggtct 323539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 778
Target Start/End: Original strand, 10221976 - 10222070
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaat 778  Q
    ||||||| |||||||  |||||||||  ||||| ||| |||||||||||||| ||||| || | | |  |||||||||| ||| |||||||||||    
T  10221976 cggtcacaattataaacaaaaattcatgttttatattcattcaataaatgatgtatgttgtttttattgtagacaatatacatcatttattgaat 10222070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 818
Target Start/End: Complemental strand, 15119913 - 15119779
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  ||||||||||||||| | |||||| ||| | |||| | | |||||| | || ||| ||||| ||||| ||||    
T  15119913 cggtcactattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaatc 15119814  T
Q  784 taaaaagtagacttttacttataacaatgaccgaa 818  Q
    ||||| ||  | |||| ||||||| | ||||||||    
T  15119813 taaaatgttaatttttgcttataatagtgaccgaa 15119779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 685 - 735
Target Start/End: Original strand, 23738324 - 23738374
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    ||||||||||||||||||||||| |  ||||||||| ||| ||||||||||    
T  23738324 ggtcactattataagtaaaaattgacattttagattcatttaataaatgat 23738374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 706 - 792
Target Start/End: Original strand, 23962299 - 23962385
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    |||| ||||||| || ||||||||||  || ||||||||| || | |||||| || | ||| ||||||||||| |||||||||||||    
T  23962299 ttcactttttaggttcattcaataaacaatgtatgtggtccatattatagactatgtacatcatttattgaatgaatctaaaaagta 23962385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 681 - 719
Target Start/End: Original strand, 43100750 - 43100788
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagat 719  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  43100750 cttcggtcactattataagcaaaaattcattttttagat 43100788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 711 - 744
Target Start/End: Complemental strand, 6096379 - 6096346
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggt 744  Q
    |||||||||||||||||| |||||||||||||||    
T  6096379 tttttagatttattcaattaatgatatatgtggt 6096346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1217 - 1250
Target Start/End: Original strand, 17069121 - 17069154
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttctttt 1250  Q
    |||||||||||||||| |||||||||||||||||    
T  17069121 ggtgccatttaatttgagaaaggagagttctttt 17069154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 685 - 826
Target Start/End: Original strand, 25270861 - 25271002
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||  |  ||||||||  ||||| |||||||| ||||| |||| | | ||| ||   || ||| ||||| ||||| |||||    
T  25270861 ggtcactattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatct 25270960  T
Q  785 aaaaagtagacttttacttataacaatgaccgaaagatgcat 826  Q
    |||| ||||| |||| ||||||| | |||||| | |||||||    
T  25270961 aaaatgtagatttttgcttataatagtgaccggaggatgcat 25271002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 690 - 735
Target Start/End: Original strand, 30435236 - 30435281
Alignment:
Q  690 ctattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    ||||||||||  ||| |||| |||||||||||||||||||||||||    
T  30435236 ctattataagataaagttcattttttagatttattcaataaatgat 30435281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 776 - 813
Target Start/End: Complemental strand, 31613375 - 31613338
Alignment:
Q  776 aataaatctaaaaagtagacttttacttataacaatga 813  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  31613375 aataaatctaaaaagtatacttttactaataacaatga 31613338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 686 - 735
Target Start/End: Complemental strand, 43703211 - 43703162
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    |||| |||||||||  |||||||| |||||||||||||||| ||||||||    
T  43703211 gtcaatattataagagaaaattcactttttagatttattcagtaaatgat 43703162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 691 - 788
Target Start/End: Complemental strand, 44089555 - 44089458
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||||||| |||||| |  ||||| ||| |||||||| ||||| |||||||||||| | |||||| || | ||| ||||||| ||| ||| |||||    
T  44089555 tattataagtcaaaattaacattttaaattcattcaatacatgatgtatgtggtctatattatagaccatgtacatcatttattcaatgaatataaaa 44089458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 2e-65; HSPs: 96)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 1215 - 1398
Target Start/End: Complemental strand, 48972495 - 48972303
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    ||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48972495 taggtgccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctc 48972396  T
Q  1306 tcaaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||       |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48972395 tcaaccactagattatttttttatactatctttcacactctctctttcatatccccacacacccataccaccaccactaaatcacaaattcaa 48972303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 51975275 - 51975085
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||||          ||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  51975275 ggtgccatttaatttgggaaaggagagttctttttcactatgggaaagttgatcatgtcaattagattaaatgaggaacatattcctatcatactctctt 51975176  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51975175 aaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 51975085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 1e-60
Query Start/End: Original strand, 1215 - 1398
Target Start/End: Original strand, 51974435 - 51974627
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 1305  Q
    ||||||||||||||||||||||||||||||||||| |         ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  51974435 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtctattagattaaatgaagaacatattcctatcatactctc 51974534  T
Q  1306 tcaaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||| |||||||||       ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51974535 tcaactactagattatttttttatactatctttcacattctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 51974627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 16270207 - 16270398
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16270207 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16270306  T
Q  1308 aaccactagatta-nnnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||        |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16270307 aaccactagattattttttttatactatctttcacactccctctttcatgtccctacacacccataccaccaccactaaatcacaaattcaa 16270398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 16271196 - 16271007
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt----tca-----aagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||| |||||||||||||||||    |||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16271196 ggtgccatttaatttaggaaaggagagttctttctcatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16271097  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16271096 aaccactagattatttttttatactatatttcacactctctctttcatgtccccacaca-ccataccaccaccactaaatcacaaattcaa 16271007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 4e-57
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 9948039 - 9948185
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  9948039 aaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 9948138  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  9948139 tcatgtccccacacacctataccaccaccactaaatcacaaattcaa 9948185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 38930356 - 38930502
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  38930356 aaagttgatcatatccattaaattaaataaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 38930455  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  38930456 tcatgttcccacacacccataccaccaccactaaatcacaaattcaa 38930502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 48971705 - 48971895
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||| |||||||||||||||||||||||||||| |         |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  48971705 ggtgtcatttaatttgggaaaggagagttctttcccacaatgagaaagttgatcatataaattagattaaatgaggaacatattcctatcatactctctc 48971804  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||| ||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48971805 aaccactatattatttttttatactatctttcacactctctctttcatgttcccacacacccataccaccaccactaaatcacaaattcaa 48971895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 4e-54
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Complemental strand, 6076871 - 6076726
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||    
T  6076871 aaagttgatcatgtccattatattaaatgagtaacatattcctatcatactctctcaaccaatagattatttttt-atactatctttcacactctctctt 6076773  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  6076772 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 6076726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 1219 - 1398
Target Start/End: Complemental strand, 38931293 - 38931104
Alignment:
Q  1219 tgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 1309  Q
    |||||||||||||||||||| ||||||||||||         |||||||||||| ||||||| ||||||| || |||||||| |||||||||||||||||    
T  38931293 tgccatttaatttgggaaagaagagttcttttctaccatgggaaagttgatcatatccattaaattaaataagaaacatatttctatcatactctctcaa 38931194  T
Q  1310 ccactagattannnnnnn-atactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||| ||||        ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38931193 ccactatattattttttttatattatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 38931104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 1217 - 1371
Target Start/End: Original strand, 23440617 - 23440779
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttcaa---------agttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |||         ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23440617 ggtgccatttaatttgggaaaggagagttctttccaactatggaaaagttgattatgtccattagattaaatgagaaacatattcctatcatactctctc 23440716  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    |||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  23440717 aaccactagatta-ttttttatactatctttcacactctctctttcatgtccccacacacccat 23440779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Complemental strand, 9948935 - 9948760
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||| ||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9948935 ggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctatc 9948836  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||             ||| ||| | |  || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9948835 aaccactagat-------------tattttttata--ctatctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 9948760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 1252 - 1371
Target Start/End: Original strand, 43737773 - 43737892
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||       | ||||||||||||| ||||||||    
T  43737773 aaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctcaaccactagattatttttttacactatctttcacattctctctt 43737872  T
Q  1352 tcatgtccccacacacccat 1371  Q
    | ||||||||||||||||||    
T  43737873 tgatgtccccacacacccat 43737892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 1217 - 1342
Target Start/End: Complemental strand, 23440913 - 23440779
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23440913 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatactctctc 23440814  T
Q  1308 aaccactagattannnnnnnatactatctttcaca 1342  Q
    |||||||||||||       |||||||||||||||    
T  23440813 aaccactagattatttttttatactatctttcaca 23440779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 1216 - 1320
Target Start/End: Complemental strand, 43738027 - 43737914
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43738027 aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatattctct 43737928  T
Q  1307 caaccactagatta 1320  Q
    ||||||||||||||    
T  43737927 caaccactagatta 43737914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 684 - 807
Target Start/End: Original strand, 19175592 - 19175715
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||||||||||||| |||| ||||||| || |||||||||||||| |||||||||||||||||  || | || ||| ||||||||||| ||||    
T  19175592 cggtcactattataagtaaaatttcactttttaggttcattcaataaatgatgtatgtggtctatttaatgaaccacatacatcatttattgaatgaatc 19175691  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||||||||| |||| |||||||    
T  19175692 taaaaagtagatttttgcttataa 19175715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1252 - 1355
Target Start/End: Complemental strand, 50827095 - 50826992
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||       ||| ||||||||||||||||||||    
T  50827095 aaagttgatcatgtccattagattaaatgagaaacatatttttatcatactctctcaaccactaaattatttttttatagtatctttcacactctctctt 50826996  T
Q  1352 tcat 1355  Q
    ||||    
T  50826995 tcat 50826992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Original strand, 193850 - 193961
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  193850 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttaatcatgtccattaaattaaatgaggaacatattcttatcatactctctc 193949  T
Q  1308 aaccactagatta 1320  Q
     | ||||||||||    
T  193950 ca-cactagatta 193961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 682 - 789
Target Start/End: Complemental strand, 13288472 - 13288366
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    |||||||||||||||||| |||||| || ||| || |||||||||||||||||| |||||||| || | ||||||| | || || |||||||||||||||    
T  13288472 ttcggtcactattataagcaaaaatgcactttataaatttattcaataaatgatgtatgtggtata-taaatagaccacatacaatatttattgaataaa 13288374  T
Q  782 tctaaaaa 789  Q
    ||||||||    
T  13288373 tctaaaaa 13288366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 684 - 799
Target Start/End: Original strand, 38834615 - 38834730
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||| | |||||||||| ||| |||||||||| ||| | |||||| |||  ||| |||| ||| ||||||||||| ||||    
T  38834615 cggtcactattataagcaaaaatttattttttagattcattaaataaatgatgtatatagtctatataaatgaccatatacatcatttattgaatgaatc 38834714  T
Q  784 taaaaagtagactttt 799  Q
    ||||||||| ||||||    
T  38834715 taaaaagtaaactttt 38834730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 684 - 807
Target Start/End: Original strand, 52923327 - 52923450
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| |||| ||||||| || |||||||||||||| ||||||||| ||| |||| |  | || ||| ||||||||||| || |    
T  52923327 cggtcactattataagcaaaatttcactttttaggttcattcaataaatgatgtatgtggtccattaaatatatcacatacatcatttattgaatgaacc 52923426  T
Q  784 taaaaagtagacttttacttataa 807  Q
    ||||||||||| |||| |||||||    
T  52923427 taaaaagtagatttttgcttataa 52923450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 686 - 816
Target Start/End: Complemental strand, 19175722 - 19175592
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||| ||||||  | |||||||||| |||||||||||||| ||||||||  ||| ||||||| | || ||| ||||||||||| || |||    
T  19175722 gtcactattataagcaaaaatctactttttagattcattcaataaatgatgtatgtggttcattaaatagaccacatacatcatttattgaatgaaccta 19175623  T
Q  786 aaaagtagacttttacttataacaatgaccg 816  Q
    ||||||  | |||||||||||| | ||||||    
T  19175622 aaaagtgaaattttacttataatagtgaccg 19175592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1252 - 1302
Target Start/End: Original strand, 27888715 - 27888765
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatact 1302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27888715 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatact 27888765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1252 - 1391
Target Start/End: Complemental strand, 31390827 - 31390692
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||| ||||||||| || ||||||||||||| |||  |||| |||||||||||| | |||||||       | ||||||||||||  ||||||||    
T  31390827 aaagttgattatgtccattggaataaatgaggaacacatttttatcctactctctcaac-attagattatttttt-acactatctttcac--tctctctt 31390732  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcaca 1391  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  31390731 tcatgtccccacacacccacaccaccaccaccaaatcaca 31390692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 684 - 820
Target Start/End: Complemental strand, 1409185 - 1409049
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattattta-ttgaataaat 782  Q
    |||||||||||||||| |||||||   |||||||||| |||||||||||||| |||| ||||||| | |||||| | || ||||||||| || ||| |||    
T  1409185 cggtcactattataagcaaaaattatctttttagattcattcaataaatgatgtatgcggtctatgt-atagactagatacattatttatttaaatgaat 1409087  T
Q  783 ctaaaaagtagacttttacttataacaatgaccgaaag 820  Q
    |||||||||  |||||| ||||||| | ||||||||||    
T  1409086 ctaaaaagtgaacttttgcttataatagtgaccgaaag 1409049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 679 - 791
Target Start/End: Original strand, 5431340 - 5431451
Alignment:
Q  679 tacttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaat 778  Q
    |||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||  ||||| |||||| |  ||||| | || ||| |||||||||||    
T  5431340 tactccggtcactattataagcaaaaattcactttttagattcattcaataaatgaagtatgttgtctatgt-gtagaccacatacatcatttattgaat 5431438  T
Q  779 aaatctaaaaagt 791  Q
     ||||||||||||    
T  5431439 gaatctaaaaagt 5431451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 687 - 748
Target Start/End: Original strand, 10256788 - 10256849
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  10256788 tcactattataagaaaaaattcactttttagattcattcaataaatgatgtatgtggtctat 10256849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1252 - 1382
Target Start/End: Original strand, 47334243 - 47334371
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||| ||||||||||||||||||||| |||| || | |||| ||||||||||| ||||||||||       | |||||||| |||  ||||||||    
T  47334243 aaagttgattatgtccattagattaaatgagaaacaaatccttatcctactctctcaa-cactagattattgttttacactatcttccaccatctctctt 47334341  T
Q  1352 tcatgtccccacacacccataccaccaccac 1382  Q
    |||||| ||||||||| |||||||| |||||    
T  47334342 tcatgt-cccacacactcataccacaaccac 47334371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 684 - 816
Target Start/End: Complemental strand, 5431476 - 5431345
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||| |||||| ||||||| | |||||||||| |||||||||||||| |||||||||||    |||||||| || | | ||||||||||| ||||    
T  5431476 cggtcactaatataagcaaaaattaactttttagattcattcaataaatgatgtatgtggtcta-cacatagacaacatacttcatttattgaatgaatc 5431378  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||||||  | |||| ||||||| | ||||||    
T  5431377 taaaaagtgaatttttgcttataatagtgaccg 5431345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 681 - 816
Target Start/End: Complemental strand, 9676105 - 9675970
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaattt-ttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaata 779  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||  ||||||||| ||| | |||||| |||| ||| | || ||||||||||| |||     
T  9676105 cttcggtcactattataagtaaaaat-caatttcttagattcatttgataaatgatgtatttagtctatataattgactaaatacattatttattaaatg 9676007  T
Q  780 aatctaaaaagtagacttttacttataacaatgaccg 816  Q
    || |||||||||  | |||||||||||| | ||||||    
T  9676006 aacctaaaaagttaatttttacttataatagtgaccg 9675970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 685 - 816
Target Start/End: Complemental strand, 52923458 - 52923327
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||  | ||||||| || |||||||||||||| |||||| | |||||||| ||| | || ||| ||||||||||| || ||    
T  52923458 ggtcactattataagcaaaaatctactttttaggttcattcaataaatgatgtatgtgatatatttaatggaccacatacatcatttattgaatgaacct 52923359  T
Q  785 aaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||  | |||| ||||||| | ||||||    
T  52923358 aaaaagtgaaattttgcttataatagtgaccg 52923327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 686 - 744
Target Start/End: Original strand, 6340565 - 6340623
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||||||    
T  6340565 gtcactattataagtaaatattcattttttaggttcattcaataaatgatatatgtggt 6340623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 684 - 778
Target Start/End: Complemental strand, 14891874 - 14891780
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaat 778  Q
    |||||||||||||||| ||||||| || |||||||||||| ||||||||||| ||| |||||| | | |||||| |||| ||| ||||| |||||    
T  14891874 cggtcactattataagcaaaaatttaaattttagatttatccaataaatgatgtatatggtctttattatagaccatatacatcatttaatgaat 14891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 682 - 747
Target Start/End: Original strand, 34597522 - 34597587
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    |||| ||||||||||||| ||||||||| |||||||||| |||||| ||||||| |||||||||||    
T  34597522 ttcgatcactattataagcaaaaattcactttttagattcattcaacaaatgatgtatgtggtcta 34597587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 682 - 807
Target Start/End: Complemental strand, 42660493 - 42660370
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    |||||||||||||||||| |||| |||| |||||| | | |||||||||||||| |||||||||||| |||| ||   ||| ||| ||||||||||| ||    
T  42660493 ttcggtcactattataagcaaaagttcattttttaaaatcattcaataaatgatgtatgtggtctatataat-ga-tgtatacatcatttattgaatgaa 42660396  T
Q  782 tctaaaaagtagacttttacttataa 807  Q
    |||||||| |  |||||| |||||||    
T  42660395 tctaaaaaatcaacttttgcttataa 42660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 685 - 806
Target Start/End: Complemental strand, 42915781 - 42915661
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| |||||  || ||||||  || ||| ||||||||||||||||||||||| | |||||| | |||||| ||||||||||| || ||    
T  42915781 ggtcactattataagcaaaaaaacactttttaagttcattaaataaatgatatatgtggtctatat-atagactacatgcatcatttattgaatgaacct 42915683  T
Q  785 aaaaagtagacttttacttata 806  Q
    ||||| |  |||||| ||||||    
T  42915682 aaaaaatcaacttttgcttata 42915661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 684 - 744
Target Start/End: Complemental strand, 4602780 - 4602720
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    ||||||||| |||||||||||||||| |||||||||  ||||||| |||||||||||||||    
T  4602780 cggtcactaatataagtaaaaattcattttttagatacattcaattaatgatatatgtggt 4602720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 791
Target Start/End: Complemental strand, 39940619 - 39940516
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||| || ||||| |||||| | ||| || |||| ||| ||||||| ||| || ||||    
T  39940619 tcactattataagtaaaaatttactttttagattcattcaataaataatgtatgtagtctatat-ataaaccatatacatcatttattaaatgaacctaa 39940521  T
Q  787 aaagt 791  Q
    |||||    
T  39940520 aaagt 39940516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 691 - 815
Target Start/End: Original strand, 44673897 - 44674020
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaag 790  Q
    ||||||||  ||||||| | ||||||| |||||| ||||||||||||||||||||||| ||||| || | ||  || | ||||||||| ||||||||||     
T  44673897 tattataaacaaaaatttattttttaggtttatttaataaatgatatatgtggtctatataataaactacatatatca-ttattgaatgaatctaaaaat 44673995  T
Q  791 tagacttttacttataacaatgacc 815  Q
    || | |||| ||||||| |||||||    
T  44673996 taaatttttgcttataataatgacc 44674020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 684 - 748
Target Start/End: Complemental strand, 47446767 - 47446703
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||||||||| ||| |||||| ||| |||||||||||||| ||||| ||||||    
T  47446767 cggtcactattataagtaaaaactcactttttaaattcattcaataaatgatgtatgtagtctat 47446703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 685 - 748
Target Start/End: Original strand, 52112881 - 52112944
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||| |||| |||| |||||| ||| |||||||||||||| ||||||||||||    
T  52112881 ggtcactattataagcaaaagttcactttttatattcattcaataaatgatgtatgtggtctat 52112944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1252 - 1310
Target Start/End: Original strand, 6076018 - 6076076
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaac 1310  Q
    |||||||||||||||||||||||||||||||||| | |||  ||||||| |||||||||    
T  6076018 aaagttgatcatgtccattagattaaatgaggaatacatttttatcatagtctctcaac 6076076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 694 - 788
Target Start/End: Complemental strand, 14958807 - 14958713
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    |||||| ||||||||| |||||||||||||||||||||||||   |||| ||| | |  ||||||| || ||| ||||||||||| |||||||||    
T  14958807 tataagaaaaaattcattttttagatttattcaataaatgatgcgtgtgatctttattgtagacaacatacatcatttattgaatgaatctaaaa 14958713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 682 - 789
Target Start/End: Complemental strand, 36164097 - 36163989
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaattttt--agatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaata 779  Q
    |||||||| ||||||||| ||||||| | |||||  | ||| ||||||||||||||||||||||| ||| | ||| || | || ||| ||||||||||||    
T  36164097 ttcggtcattattataagcaaaaattaactttttttaaattcattcaataaatgatatatgtggtatatat-ataaactacatacatcatttattgaata 36163999  T
Q  780 aatctaaaaa 789  Q
    ||||||||||    
T  36163998 aatctaaaaa 36163989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 681 - 818
Target Start/End: Complemental strand, 9902706 - 9902570
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||||||||||| |||||| |||||||  ||||||| | | |||||||||||||||||||| || ||| | |||||| | || ||| ||||| | ||| |    
T  9902706 cttcggtcactactataagcaaaaatttgatttttaaagtcattcaataaatgatatatgtagtttatat-atagaccacatacatcatttaataaatta 9902608  T
Q  781 atctaaaaagtagacttttacttataacaatgaccgaa 818  Q
    | |||||||||  | |||||||||||||| ||| ||||    
T  9902607 acctaaaaagttaatttttacttataacagtgatcgaa 9902570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 682 - 735
Target Start/End: Original strand, 27939189 - 27939242
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    |||||||||||||||||| ||||||||| |||||||||||||  ||||||||||    
T  27939189 ttcggtcactattataagcaaaaattcattttttagatttatataataaatgat 27939242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 711 - 819
Target Start/End: Original strand, 13288366 - 13288473
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaa 810  Q
    ||||||||||||||||||||||  | |||||||||||||| ||| || | || ||| ||||||||||||||| || |||||  | |||| ||||||| |     
T  13288366 tttttagatttattcaataaatattgtatgtggtctattt-atataccacatacatcatttattgaataaatttataaagtgcatttttgcttataatag 13288464  T
Q  811 tgaccgaaa 819  Q
    |||||||||    
T  13288465 tgaccgaaa 13288473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 816
Target Start/End: Complemental strand, 18353708 - 18353576
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||   | ||||||||| ||||||| |||||||||| | |||| | | |||||  |  ||||||||||| |||||  |||    
T  18353708 cggtcactattataagcaaaaatcataattttagattcattcaattaatgatatatatagtctttattatagatcacgtgcattatttaatgaatggatc 18353609  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||| || || |||||||||||| | ||||||    
T  18353608 taaaatgttgatttttacttataatagtgaccg 18353576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 711 - 807
Target Start/End: Original strand, 39940518 - 39940613
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    ||||||| || ||| |||||||||| ||| |||| ||| || ||||| | || ||||||||||||||| ||||||||||||| | ||||||||||||    
T  39940518 tttttaggttcatttaataaatgatgtatatggtttatata-tagactacatacattatttattgaatgaatctaaaaagtaaatttttacttataa 39940613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 685 - 789
Target Start/End: Complemental strand, 44674020 - 44673917
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||| || ||||  |||||| | ||  || ||||||| |||||| ||    
T  44674020 ggtcattattataagcaaaaatttaatttttagattcattcaat-aatgatatatgtagtttattatatagaccacatatatcatttattaaataaacct 44673922  T
Q  785 aaaaa 789  Q
    |||||    
T  44673921 aaaaa 44673917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1252 - 1365
Target Start/End: Original strand, 12925917 - 12926028
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||| ||||||||||||||||||| |||| | |||| |||  ||||||||||| || |||||||       | |||||||| ||| |||||||||    
T  12925917 aaagttgataatgtccattagattaaatgtggaatacattcttatactactctctcaa-cattagatta-ttttttacactatcttccaccctctctctt 12926014  T
Q  1352 tcatgtccccacac 1365  Q
    ||||||||||||||    
T  12926015 tcatgtccccacac 12926028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 678 - 789
Target Start/End: Original strand, 14958679 - 14958790
Alignment:
Q  678 atacttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaa 777  Q
    ||||| ||||||| | |||||| |||| ||||| ||||||||| |||||||||||||| ||||| |||||    | |||  | | |||| ||||||||||    
T  14958679 atactccggtcacaaatataagcaaaacttcaaattttagattcattcaataaatgatgtatgttgtctacaataaagatcacacgcatcatttattgaa 14958778  T
Q  778 taaatctaaaaa 789  Q
    ||||||||||||    
T  14958779 taaatctaaaaa 14958790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 685 - 748
Target Start/End: Complemental strand, 18551396 - 18551333
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||| |||||||| |  ||||||||| |||||| ||||||| ||||||||||||    
T  18551396 ggtcactattataaataaaaattaacattttagattcattcaacaaatgatgtatgtggtctat 18551333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 692 - 807
Target Start/End: Complemental strand, 43318136 - 43318021
Alignment:
Q  692 attataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    |||||||| || |||||| |||||||||| ||| |||||||||||||  |||||||| | |||||| | || ||  ||||||||||| || |||||| ||    
T  43318136 attataagcaagaattcattttttagattcatttaataaatgatatacatggtctatattatagactacatacacaatttattgaatgaacctaaaacgt 43318037  T
Q  792 agacttttacttataa 807  Q
     || ||||| ||||||    
T  43318036 tgatttttatttataa 43318021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 686 - 748
Target Start/End: Complemental strand, 1602951 - 1602889
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||| ||||||||| ||||||| || ||||| |||||| | ||||||||||||    
T  1602951 gtcactattataagcaaaaattcattttttaggttcattcattaaatgttgtatgtggtctat 1602889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 686 - 748
Target Start/End: Complemental strand, 2122703 - 2122641
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||| |||||| || |||||||||| ||||| |||||| | ||||||||||||    
T  2122703 gtcactattataagcaaaaatccattttttagattcattcattaaatgttgtatgtggtctat 2122641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 686 - 744
Target Start/End: Complemental strand, 6340704 - 6340646
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    |||| ||||||||| ||||||| | ||||||| || |||||||||||||||||||||||    
T  6340704 gtcattattataagcaaaaattaactttttaggttcattcaataaatgatatatgtggt 6340646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 684 - 818
Target Start/End: Original strand, 9675970 - 9676104
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||||||||||| | ||||||| || ||| ||||||| || ||| | ||| |||  |||||| | || ||| ||||||  ||| ||||    
T  9675970 cggtcactattataagtaaaaattaactttttaggttcatttaataaataatgtatttagtcaattatatagactaaatacatcatttatcaaatgaatc 9676069  T
Q  784 taaaaagtagacttttacttataacaatgaccgaa 818  Q
    ||| || | || |||||||||||| | ||||||||    
T  9676070 taagaaattgatttttacttataatagtgaccgaa 9676104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 703 - 745
Target Start/End: Complemental strand, 29204529 - 29204487
Alignment:
Q  703 aaattcaatttttagatttattcaataaatgatatatgtggtc 745  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  29204529 aaatttaatttttagatttattgaataaatgatatatgtggtc 29204487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 690 - 788
Target Start/End: Complemental strand, 31325940 - 31325842
Alignment:
Q  690 ctattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||| ||||||||||  ||||||||| |||||||||||| ||||||| |||||    | |||  | || ||||||| |||||||||||||||||    
T  31325940 ctattataaataaaaattcatattttagattcattcaataaatgttatatgttgtctacaataaagaacacatacattattaattgaataaatctaaaa 31325842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 711 - 816
Target Start/End: Complemental strand, 38834720 - 38834615
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctattta-atagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataaca 809  Q
    |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||| ||| ||||||| ||| |||||||||| || | |||| ||||||| |    
T  38834720 tttttagattcattcaataaatgatgtatatggtc-atttatatagactatatacatcatttatttaatgaatctaaaaaataaatttttgcttataata 38834622  T
Q  810 atgaccg 816  Q
     ||||||    
T  38834621 gtgaccg 38834615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 681 - 807
Target Start/End: Complemental strand, 52113014 - 52112889
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    |||| ||||||||||||||||||| || | ||||||| || ||  |||||||||| |||||||| | | | |||||| | || ||| ||||||||||| |    
T  52113014 cttcagtcactattataagtaaaagttgactttttaggttcatctaataaatgatgtatgtggtttctat-atagaccacatacatcatttattgaatga 52112916  T
Q  781 atctaaaaagtagacttttacttataa 807  Q
    || ||||||||  |||||| |||||||    
T  52112915 atataaaaagtgaacttttgcttataa 52112889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 685 - 746
Target Start/End: Original strand, 4060176 - 4060237
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    |||||||| |||||| |||||| || ||||||||| |||||||| ||| |||||||||||||    
T  4060176 ggtcactaatataagcaaaaatccactttttagatatattcaattaataatatatgtggtct 4060237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 695 - 788
Target Start/End: Original strand, 8984203 - 8984296
Alignment:
Q  695 ataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||| ||||| |||  ||||||||| |||||||||||||| |||||||||| | |  ||||||| ||  || ||||||||||| |||||||||    
T  8984203 ataagcaaaaaatcatgttttagattcattcaataaatgatgtatgtggtctttattgtagacaacataaatcatttattgaatgaatctaaaa 8984296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 722 - 799
Target Start/End: Original strand, 24807933 - 24808010
Alignment:
Q  722 attcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagactttt 799  Q
    |||||||| ||||| |||||||||||  ||||||||   || ||| ||||||||||| |||||||||||| |||||||    
T  24807933 attcaatatatgatgtatgtggtctacataatagactgcatacatcatttattgaatgaatctaaaaagtggactttt 24808010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 747
Target Start/End: Complemental strand, 34597639 - 34597586
Alignment:
Q  694 tataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    |||||| ||||||||| |||||||||| |||||| ||||||| |||||||||||    
T  34597639 tataagcaaaaattcactttttagattcattcaacaaatgatgtatgtggtcta 34597586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 687 - 816
Target Start/End: Original strand, 45115177 - 45115306
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    |||||| |||||| ||||||  |  |||||| |||||||| | |||||||||||||||||||   | |||| || ||||| ||| | ||||| |||||||    
T  45115177 tcactaatataagcaaaaatctatattttaggtttattcatttaatgatatatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaa 45115276  T
Q  787 aaagtagacttttacttataacaatgaccg 816  Q
    || ||||| |||| ||||||| | ||||||    
T  45115277 aatgtagatttttgcttataatagtgaccg 45115306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 685 - 741
Target Start/End: Complemental strand, 6079198 - 6079142
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    ||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||||    
T  6079198 ggtcactattataagaaaaaatccaccttttagattcattcaataaatgatgtatgt 6079142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 681 - 741
Target Start/End: Complemental strand, 12750621 - 12750561
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    ||||||| |||||||||| |||||||| | |||||| ||| |||||||||||||| |||||    
T  12750621 cttcggttactattataaataaaaattgactttttaaattcattcaataaatgatgtatgt 12750561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 686 - 742
Target Start/End: Complemental strand, 13319953 - 13319897
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    |||||||||||||| ||||||| | |||||| | ||||| |||||||||||||||||    
T  13319953 gtcactattataagcaaaaatttactttttaaaattatttaataaatgatatatgtg 13319897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 15351823 - 15351747
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||| |||||||||||||| |||||||||| | |  ||||||| || ||| ||||||||||| ||| |||||    
T  15351823 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatttaaaa 15351747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Original strand, 16270901 - 16270933
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  16270901 ggtgccatttaatttgggaaaggagagttcttt 16270933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 34768283 - 34768414
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||| |||| |||| |||| |||||| |||  ||||||||||||| ||| | |||||| | |||||  | || |||||||| |||||| || |    
T  34768283 cggtcactattgtaagcaaaatttcactttttaaattctttcaataaatgatgtatatagtctatat-atagatcacatacattatttgttgaatgaacc 34768381  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||||||  |||||| ||||||| | ||||||    
T  34768382 taaaaagtcaacttttgcttataatagtgaccg 34768414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1217 - 1249
Target Start/End: Complemental strand, 38930608 - 38930576
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttt 1249  Q
    |||||||||||||||||||||||||||||||||    
T  38930608 ggtgccatttaatttgggaaaggagagttcttt 38930576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 685 - 788
Target Start/End: Original strand, 3013615 - 3013718
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||| | |  ||||||||||||||||| |||| | |||||||||| | | ||| | ||||| ||| ||||| ||||| ||| |    
T  3013615 ggtcactattataagcaaaaaattatattttagatttattcaattaatgttgtatgtggtctttattataaataatatacatcatttaatgaatgaatgt 3013714  T
Q  785 aaaa 788  Q
    ||||    
T  3013715 aaaa 3013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 681 - 748
Target Start/End: Original strand, 9902569 - 9902636
Alignment:
Q  681 cttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||| ||||| ||||||||||||||| | ||||||| || ||| | |||||||| ||||||||||||    
T  9902569 cttcgatcactgttataagtaaaaattaactttttaggttaatttattaaatgatgtatgtggtctat 9902636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 791
Target Start/End: Complemental strand, 34768414 - 34768308
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| || | ||||||| || |||||| |||| || |||||| ||||| | |||||| |||| ||| ||||||||||  |||     
T  34768414 cggtcactattataagcaaaagttgactttttaggttcattcaacaaataatgtatgtgatctatat-atagactatatacatcatttattgaaagaatt 34768316  T
Q  784 taaaaagt 791  Q
    ||||||||    
T  34768315 taaaaagt 34768308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 686 - 788
Target Start/End: Original strand, 34953902 - 34954004
Alignment:
Q  686 gtcactattataagtaaaaattcaat-ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||||||||| ||||| ||||| ||||| ||| ||||| |||||||| ||||||||||||   | |||| |||| ||| ||| ||||||| |||||    
T  34953902 gtcactattataagcaaaaa-tcaatattttaaattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatct 34954000  T
Q  785 aaaa 788  Q
    ||||    
T  34954001 aaaa 34954004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1252 - 1307
Target Start/End: Complemental strand, 40649571 - 40649516
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||| ||||||||||||||||||| |||||| |||| |||  |||||||||    
T  40649571 aaagttgataatgtccattagattaaatgtggaacacattcttatactactctctc 40649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 685 - 748
Target Start/End: Original strand, 48083509 - 48083572
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||| ||||||| |  |||||| || ||||| |||||||| ||||||||||||    
T  48083509 ggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctat 48083572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 691 - 745
Target Start/End: Complemental strand, 1597318 - 1597264
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtc 745  Q
    ||||||||||||||||| |  ||||| ||||||||| |||||||||||| |||||    
T  1597318 tattataagtaaaaattaatattttaaatttattcattaaatgatatatatggtc 1597264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 685 - 735
Target Start/End: Complemental strand, 13043475 - 13043425
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    ||||||||||||||||||||||| |  ||||||||| ||||||| ||||||    
T  13043475 ggtcactattataagtaaaaattaatattttagattcattcaattaatgat 13043425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 742
Target Start/End: Complemental strand, 14214665 - 14214607
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    |||||||||||||||| ||||| | | ||||||| || |||||||||||||| ||||||    
T  14214665 cggtcactattataagcaaaaacttactttttaggttcattcaataaatgatgtatgtg 14214607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 746
Target Start/End: Original strand, 17490492 - 17490554
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    ||||||||| |||||| |||||| || |||||||||  ||| ||| |||||||||||||||||    
T  17490492 cggtcactaatataagcaaaaatccactttttagatacatttaattaatgatatatgtggtct 17490554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 702 - 748
Target Start/End: Complemental strand, 29663784 - 29663738
Alignment:
Q  702 aaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||| ||||| |||||||| ||||| |||||||||||||||||||||    
T  29663784 aaaaatcaatatttagattcattcattaaatgatatatgtggtctat 29663738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 711 - 745
Target Start/End: Original strand, 29797803 - 29797837
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtc 745  Q
    ||||||||||||||||||||||||| |||||||||    
T  29797803 tttttagatttattcaataaatgatgtatgtggtc 29797837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 690 - 724
Target Start/End: Complemental strand, 45562885 - 45562851
Alignment:
Q  690 ctattataagtaaaaattcaatttttagatttatt 724  Q
    |||||||||||||||||||| ||||||||||||||    
T  45562885 ctattataagtaaaaattcagtttttagatttatt 45562851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 684 - 733
Target Start/End: Original strand, 14214554 - 14214603
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatg 733  Q
    |||||||||||||||| ||||||||| ||||||| || ||||||| ||||    
T  14214554 cggtcactattataagcaaaaattcactttttaggttcattcaattaatg 14214603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 711 - 792
Target Start/End: Original strand, 21909872 - 21909953
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagta 792  Q
    ||||||| |||||||||| |||||| ||||||||| || | ||  || | || ||| ||| |||||||||||||||||||||    
T  21909872 tttttaggtttattcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaataaatctaaaaagta 21909953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 685 - 826
Target Start/End: Original strand, 24981846 - 24981987
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||| |  ||||||||  ||||| |||||||| ||||| |||| | | ||| ||   || ||| ||||| ||||| |||||    
T  24981846 ggtcactattataagcaaaaattaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatct 24981945  T
Q  785 aaaaagtagacttttacttataacaatgaccgaaagatgcat 826  Q
    |||| || || |||| ||||||| | |||||| | |||||||    
T  24981946 aaaatgttgatttttgcttataatagtgaccggaggatgcat 24981987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 722 - 791
Target Start/End: Complemental strand, 34184532 - 34184463
Alignment:
Q  722 attcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    ||||||||||| || |||||| || || | |||||| | || |||||||||||||||||| |||||||||    
T  34184532 attcaataaattatgtatgtgatccatattatagactacatacattatttattgaataaacctaaaaagt 34184463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 687 - 788
Target Start/End: Complemental strand, 34954029 - 34953928
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||| ||||||| |  ||||||||| ||||||| |||||| ||| |||||| | | |||||| | || ||| ||||| ||||| ||| |||    
T  34954029 tcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatttaa 34953930  T
Q  787 aa 788  Q
    ||    
T  34953929 aa 34953928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 692 - 741
Target Start/End: Original strand, 36163970 - 36164019
Alignment:
Q  692 attataagtaaaaattcaatttttagatttattcaataaatgatatatgt 741  Q
    |||||||| | || |||| ||||||||||||||||||||||||| |||||    
T  36163970 attataagcagaatttcattttttagatttattcaataaatgatgtatgt 36164019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 691 - 744
Target Start/End: Original strand, 43603638 - 43603691
Alignment:
Q  691 tattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggt 744  Q
    ||||||||| ||||||||| || ||||||| ||| ||||||| |||||||||||    
T  43603638 tattataagcaaaaattcatttgttagattcattaaataaattatatatgtggt 43603691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 712 - 793
Target Start/End: Original strand, 46829904 - 46829985
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtag 793  Q
    ||||||||||||||| |||||||| |||||||||| | | ||| || |  | ||| ||||| ||||||||||||||| ||||    
T  46829904 ttttagatttattcattaaatgatctatgtggtctttattataaaccacgtacatcatttaatgaataaatctaaaatgtag 46829985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 722 - 807
Target Start/End: Complemental strand, 50308726 - 50308641
Alignment:
Q  722 attcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataa 807  Q
    ||||| |||||||| ||| |||||||| | || ||| | || ||| ||||| |||||||||||||||||| || |||| |||||||    
T  50308726 attcattaaatgatgtatttggtctatgttattgaccaaatacataatttaatgaataaatctaaaaagttgatttttgcttataa 50308641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 7e-62; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 7e-62
Query Start/End: Original strand, 1217 - 1398
Target Start/End: Original strand, 38023624 - 38023814
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||| ||||||||||||||||||||| ||||||||         |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  38023624 ggtgtcatttaatttgggaaaggagaattcttttccatcatggaaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctctc 38023723  T
Q  1308 aaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38023724 aaccactagattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 38023814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Original strand, 41859309 - 41859500
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||||||| |         |||||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  41859309 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccgttagattaaatgaagaacatattcatatcatactctct 41859408  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41859409 caaccactagattatttttttatactatctttcacactctctctttcatatccccacacacccataccaccaccactaaatcacaaattcaa 41859500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 2e-59
Query Start/End: Original strand, 1215 - 1398
Target Start/End: Complemental strand, 32537535 - 32537346
Alignment:
Q  1215 taggtgccatttaatttgggaaaggagagttcttttc------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 1308  Q
    ||||| ||||||||||||||||| |||||||||||||      |||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  32537535 taggtaccatttaatttgggaaatgagagttcttttccatgagaaagttaatcatgtccattatattaaataaggaacatattcttatcatactctctca 32537436  T
Q  1309 accactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32537435 accactagattatttttttatactatctttcgcactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 32537346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 1e-57
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 41860145 - 41859954
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||||||||| |||||| ||||          |||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  41860145 aggtgccatttaatttgggaaagaagagttattttttactatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactttct 41860046  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41860045 caaccactatattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 41859954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 1224 - 1398
Target Start/End: Original strand, 37639718 - 37639901
Alignment:
Q  1224 tttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccact 1314  Q
    |||||||||||||||||||||||||| |         |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  37639718 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatgatactctctcaaccact 37639817  T
Q  1315 agattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37639818 agattatttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcgcaaattcaa 37639901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1252 - 1398
Target Start/End: Original strand, 32536752 - 32536895
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  32536752 aaagttgatcatgtccattagattaaatggggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 32536851  T
Q  1352 tcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||    
T  32536852 tcatgtccccacacacccat---accaccactaaatcacaaattcaa 32536895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 9e-49
Query Start/End: Original strand, 1216 - 1371
Target Start/End: Complemental strand, 34992313 - 34992149
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34992313 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 34992214  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccat 1371  Q
    ||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  34992213 caaccactaaattatttttttatactatctttcacactctctctttcatgtccccacacacccat 34992149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 1284 - 1398
Target Start/End: Complemental strand, 38024502 - 38024389
Alignment:
Q  1284 aacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccact 1383  Q
    |||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38024502 aacatatttctatcatactctctcaaccactagattatttttt-atactatctttcacactctctctttcatgtccccacacacccataccaccaccatt 38024404  T
Q  1384 aaatcacaaattcaa 1398  Q
    |||||||||||||||    
T  38024403 aaatcacaaattcaa 38024389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Original strand, 5034897 - 5035074
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  5034897 aggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattgaatgaggaacatattcatatcatactctct 5034996  T
Q  1307 caaccactagattannnnnnnatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||       ||||||              |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  5034997 caaccactagattatttttttatacta--------------tctttcatgtccccacacacccatacaaccaccactaaaacacaaattcaa 5035074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 1328 - 1398
Target Start/End: Complemental strand, 37640525 - 37640455
Alignment:
Q  1328 atactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37640525 atactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 37640455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 1217 - 1320
Target Start/End: Original strand, 34992015 - 34992127
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||| ||||||| |||||         |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34992015 ggtgccatttaatttgggaaacgagagttattttccaccatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 34992114  T
Q  1308 aaccactagatta 1320  Q
    |||||||| ||||    
T  34992115 aaccactaaatta 34992127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 684 - 816
Target Start/End: Complemental strand, 28882800 - 28882668
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  |||||| |||||||||||||||||||||||||||||||  ||| || | || ||| ||||||||||| ||||    
T  28882800 cggtcactattataagcaaaaatcaaccttttaggtttattcaataaatgatatatgtggtctattatatataccacatacatcatttattgaatgaatc 28882701  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||||||||||| || |||| | ||||||    
T  28882700 taaaaagtagacttttgctcataatagtgaccg 28882668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1217 - 1310
Target Start/End: Complemental strand, 5035324 - 5035222
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  5035324 ggtgccatttaatttgggaaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 5035225  T
Q  1308 aac 1310  Q
    |||    
T  5035224 aac 5035222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 686 - 816
Target Start/End: Original strand, 7410571 - 7410701
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||| |||| || | || ||||||| |||||||||||||||||||||||||||||||| ||| | || ||| ||||||| |||||| |||    
T  7410571 gtcactattataagcaaaatttaatttattagattcattcaataaatgatatatgtggtctatttaatggaccacatacatcatttatttaataaaccta 7410670  T
Q  786 aaaagtagacttttacttataacaatgaccg 816  Q
    ||||| |||  ||| ||||||| | ||||||    
T  7410671 aaaagcagatatttgcttataatagtgaccg 7410701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 28882668 - 28882800
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||||| || |||| |  | |||||||||| |||||||||||||| |||||||| ||| |||||||| | ||  || |||||||||||||| |    
T  28882668 cggtcactattatgagcaaaagtctactttttagattcattcaataaatgatgtatgtggtatatataatagaccacatatatcatttattgaataaacc 28882767  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||| || || |||| ||||||| | ||||||    
T  28882768 taaaaggttgatttttgcttataatagtgaccg 28882800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 685 - 807
Target Start/End: Original strand, 5888341 - 5888463
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||| |  ||||||||| ||||| |||||||| ||||| ||||||   | |||| |||| ||| ||| ||||||| |||||    
T  5888341 ggtcactattataagcaaaaattaacgttttagattcattcattaaatgatgtatgttgtctataataaagaccatatacatcattaattgaatgaatct 5888440  T
Q  785 aaaaagtagacttttacttataa 807  Q
    | |||||||| |||| |||||||    
T  5888441 acaaagtagatttttgcttataa 5888463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 684 - 818
Target Start/End: Original strand, 36916587 - 36916721
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||||||||||||| ||    ||||||||||||||||| |||||||||| | |||| | | |||||| | || ||||||||| | ||||||||    
T  36916587 cggtcactattataagtaaaattttgcattttagatttattcaattaatgatatatttagtctttattatagaccacatacattatttaataaataaatc 36916686  T
Q  784 taaaaagtagacttttacttataacaatgaccgaa 818  Q
    |||||  || | |||| ||||||| | ||||||||    
T  36916687 taaaatataaaattttgcttataatagtgaccgaa 36916721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 684 - 816
Target Start/End: Complemental strand, 15037887 - 15037754
Alignment:
Q  684 cggtcactattataagtaaaaattcaattttt-agatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    ||||||||||||||||||||| || | ||||| || || |||||||||||||| | ||||| |||||||||  || | || ||| ||||||||||| ||     
T  15037887 cggtcactattataagtaaaattttatttttttaggttcattcaataaatgatgtgtgtggcctatttaatgaactacatacatcatttattgaatgaac 15037788  T
Q  783 ctaaaaagtagacttttacttataacaatgaccg 816  Q
    |||||||||||| ||||  |||||| | ||||||    
T  15037787 ctaaaaagtagatttttgtttataatactgaccg 15037754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 685 - 790
Target Start/End: Original strand, 24820303 - 24820407
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||||| || |||| || |||||||||||||| |||||||| ||| ||| |||  | || ||| ||||||||||| |||||    
T  24820303 ggtcactattataagcaaaaattcacttcttaggttcattcaataaatgatgtatgtggtttatataa-agatcacatacatcatttattgaatgaatct 24820401  T
Q  785 aaaaag 790  Q
    ||||||    
T  24820402 aaaaag 24820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 684 - 788
Target Start/End: Original strand, 8506222 - 8506325
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||| | |||||| ||||||||  | |||||||| |||||||||||| |||||||||||| | |  ||||||| || ||||||||||||||| ||||    
T  8506222 cggtcacaaatataagcaaaaattcg-tgtttagattcattcaataaatgttatatgtggtctttattgtagacaacatacattatttattgaatgaatc 8506320  T
Q  784 taaaa 788  Q
    |||||    
T  8506321 taaaa 8506325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 687 - 813
Target Start/End: Complemental strand, 17800760 - 17800636
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||| ||||||| ||||||||| |||||| ||| |||||||||||||| | |||||||||| | |||||  |||||||| ||||||||||| || ||||    
T  17800760 tcactgttataag-aaaaattcactttttaaattcattcaataaatgatgtctgtggtctatat-atagatcatatgcatcatttattgaatgaacctaa 17800663  T
Q  787 aaagtagacttttacttataacaatga 813  Q
     ||||  ||||||  |||||| |||||    
T  17800662 taagtcaacttttgtttataataatga 17800636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 693 - 791
Target Start/End: Complemental strand, 24419007 - 24418910
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    ||||||| ||||||||| |||||||||| |||||||||||||| ||||| |||||| | |||||| | || ||| ||||||||||| ||  ||||||||    
T  24419007 ttataagcaaaaattcactttttagattcattcaataaatgatgtatgtcgtctatat-atagaccacatacatcatttattgaatgaacttaaaaagt 24418910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 684 - 742
Target Start/End: Complemental strand, 24820433 - 24820375
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    |||||||||||||||| ||||||||  |||||||||| |||||||||||||| ||||||    
T  24820433 cggtcactattataagcaaaaattctctttttagattcattcaataaatgatgtatgtg 24820375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 685 - 816
Target Start/End: Original strand, 7258593 - 7258721
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||   ||| || || ||||||||| ||||| ||||| || ||||||||||||   | |||| |||||||| ||| ||||||| |||||    
T  7258593 ggtcactattataa---aaactttaaattttagattcattcattaaataatgtatgtggtctataataaagaccatatgcatcattaattgaatgaatct 7258689  T
Q  785 aaaaagtagacttttacttataacaatgaccg 816  Q
    |||| ||| | |||||||||||| | ||||||    
T  7258690 aaaatgtaaaattttacttataatagtgaccg 7258721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 682 - 815
Target Start/End: Original strand, 26998671 - 26998804
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    |||||||||||||||||  ||||||| | ||||||| |||||| | |||||||| ||| |||||||  | || ||| | || ||| ||||| | ||||||    
T  26998671 ttcggtcactattataaacaaaaattaattttttaggtttatttattaaatgatgtatttggtctacattattgaccaaatacatcatttaataaataaa 26998770  T
Q  782 tctaaaaagtagacttttacttataacaatgacc 815  Q
    | ||||||||  | |||||||||||| |||||||    
T  26998771 tttaaaaagttaatttttacttataataatgacc 26998804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 685 - 816
Target Start/End: Complemental strand, 6260744 - 6260613
Alignment:
Q  685 ggtcactattataagtaaaaattca-atttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||||||| |||||||||  |||||||||| ||||||||||||| |||| || ||||| | ||||   | || ||| ||||||| |||||| |    
T  6260744 ggtcactattataagcaaaaattcatttttttagattcattcaataaatgaaatatatgatctatat-ataggtcacatacatcatttattaaataaacc 6260646  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    |||||| |  |||||| ||||||| ||||||||    
T  6260645 taaaaattcaacttttgcttataataatgaccg 6260613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 7258721 - 7258617
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    ||||||||||||||||||||| || |  ||||||||| ||||||| ||||||  || |||||| | | |||||| | || ||||||||| ||||| ||||    
T  7258721 cggtcactattataagtaaaattttacattttagattcattcaattaatgatgcatatggtctttattatagaccacatacattatttaatgaatgaatc 7258622  T
Q  784 taaaa 788  Q
    |||||    
T  7258621 taaaa 7258617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 685 - 789
Target Start/End: Original strand, 13964424 - 13964528
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||||||||||||| ||||||  |  ||||| ||| |||||||||||||| |||||||||||| | |||||| || | ||| ||||| | ||| |||||    
T  13964424 ggtcactattataagcaaaaatcaacattttaaattcattcaataaatgatgtatgtggtctatattatagaccatgtacatcatttactcaatgaatct 13964523  T
Q  785 aaaaa 789  Q
    |||||    
T  13964524 aaaaa 13964528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 816
Target Start/End: Original strand, 24287789 - 24287921
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| |||| ||    ||||||||| ||||| |||||||| ||| ||||||||   | |||| |||| ||| ||| | ||||||||||    
T  24287789 cggtcactattataagcaaaactttgcattttagattcattcattaaatgatgtatatggtctataataaagaccatatacatcattaactgaataaatc 24287888  T
Q  784 taaaaagtagacttttacttataacaatgaccg 816  Q
    ||||| | | | |||||||||||| ||||||||    
T  24287889 taaaatgcaaagttttacttataataatgaccg 24287921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 684 - 791
Target Start/End: Original strand, 24418885 - 24418991
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||| |  ||| || | ||||||  || |||||||||||||| |||||||||||| | |||||| | || ||| ||||||||||| ||||    
T  24418885 cggtcactattataggctaaagttgactttttaagttcattcaataaatgatgtatgtggtctatat-atagacgacatacatcatttattgaatgaatc 24418983  T
Q  784 taaaaagt 791  Q
    ||||||||    
T  24418984 taaaaagt 24418991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 684 - 786
Target Start/End: Complemental strand, 7410701 - 7410599
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||| ||    ||||||| |||||| |||||||||| ||||||||| ||| ||||||| | ||  || ||||||||||| ||||    
T  7410701 cggtcactattataagcaaatatctgctttttaggtttattaaataaatgatgtatgtggtccattaaatagaccacatatatcatttattgaatgaatc 7410602  T
Q  784 taa 786  Q
    |||    
T  7410601 taa 7410599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 726 - 820
Target Start/End: Complemental strand, 29309561 - 29309467
Alignment:
Q  726 aataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagtagacttttacttataacaatgaccgaaag 820  Q
    ||||||||||||||  ||||||||  |||||| | |||||| ||||| ||||| || |||||| |||||  ||||||||||| | ||||||||||    
T  29309561 aataaatgatatatacggtctattatatagaccacatgcatcatttaatgaatgaacctaaaaggtagagatttacttataatagtgaccgaaag 29309467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 682 - 816
Target Start/End: Complemental strand, 36916721 - 36916587
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaa 781  Q
    |||||||||||||||||| |||| || |  ||||||||||||| | ||||| || ||||||||||||   | |||| | ||  || ||| ||||||||||    
T  36916721 ttcggtcactattataagcaaaattttatattttagatttatttattaaataatgtatgtggtctataataaagactaaatatatcattaattgaataaa 36916622  T
Q  782 tctaaaaagtagacttttacttataacaatgaccg 816  Q
    ||||||| | | | |||||||||||| | ||||||    
T  36916621 tctaaaatgcaaaattttacttataatagtgaccg 36916587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 685 - 746
Target Start/End: Complemental strand, 4613694 - 4613634
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    ||||||||||||||||||||||| |  ||||| ||| |||||||||||||| ||||||||||    
T  4613694 ggtcactattataagtaaaaattgacattttaaattcattcaataaatgat-tatgtggtct 4613634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 682 - 735
Target Start/End: Original strand, 13841850 - 13841903
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgat 735  Q
    |||||||||||||||||| ||||||| | |||||| ||| ||||||||||||||    
T  13841850 ttcggtcactattataagcaaaaatttactttttaaattcattcaataaatgat 13841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 686 - 815
Target Start/End: Complemental strand, 17871897 - 17871768
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatcta 785  Q
    |||||||||||||| ||||||  | ||||||| || ||||| |||||||| ||| | |||||| | || ||| | || ||| ||||| ||||| || |||    
T  17871897 gtcactattataagcaaaaatcaattttttaggttcattcattaaatgatgtatttagtctatattattgaccaaatacatcatttaatgaatgaaccta 17871798  T
Q  786 aaaagtagacttttacttataacaatgacc 815  Q
    |||||| || |||| ||||||| |||||||    
T  17871797 aaaagttgatttttgcttataataatgacc 17871768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 687 - 816
Target Start/End: Complemental strand, 17986327 - 17986198
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    ||||||||||||||||||||  | ||||||| || ||||| |||||||| ||| | |||||| | || ||| | || ||| ||||| ||||| ||  ||     
T  17986327 tcactattataagtaaaaatcaactttttaggttcattcattaaatgatgtatttagtctatgttattgaccaaatacatcatttaatgaatgaacttat 17986228  T
Q  787 aaagtagacttttacttataacaatgaccg 816  Q
    ||||| || |||||||||||| ||||||||    
T  17986227 aaagttgatttttacttataataatgaccg 17986198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1216 - 1249
Target Start/End: Complemental strand, 44098470 - 44098437
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttt 1249  Q
    ||||||||||||||||||||||||||||||||||    
T  44098470 aggtgccatttaatttgggaaaggagagttcttt 44098437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 688 - 788
Target Start/End: Complemental strand, 5888468 - 5888368
Alignment:
Q  688 cactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaa 787  Q
    |||||||||||| ||||||  | ||| |||||| ||||||| |||||| ||| |||||| | | |||||||| || ||| ||||| ||||| ||||||||    
T  5888468 cactattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaa 5888369  T
Q  788 a 788  Q
    |    
T  5888368 a 5888368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Original strand, 11295668 - 11295772
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||  |  ||||||||  ||||| |||||||| |||||||||| | | ||| || | |||||| ||||| ||||| ||||    
T  11295668 cggtcactattataagcaaaaatcaacattttagatacattcattaaatgatgtatgtggtctttattataaaccacatgcatcatttaatgaatgaatc 11295767  T
Q  784 taaaa 788  Q
    |||||    
T  11295768 taaaa 11295772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 24287921 - 24287817
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||| |||||||||||||| ||    ||||||||||||||| | |||||| ||| |||||| | | |||||| |||| ||| ||||| ||||| ||||    
T  24287921 cggtcattattataagtaaaactttgcattttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatgaatc 24287822  T
Q  784 taaaa 788  Q
    |||||    
T  24287821 taaaa 24287817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 687 - 791
Target Start/End: Original strand, 36307999 - 36308102
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    |||||||||||| ||||| || | ||||||| || |||||||||||||| ||||||||  || | ||||||   || ||| ||||||||||| |||||||    
T  36307999 tcactattataaataaaagttgattttttaggttcattcaataaatgatgtatgtggttcatat-atagactgcatacatcatttattgaatgaatctaa 36308097  T
Q  787 aaagt 791  Q
    |||||    
T  36308098 aaagt 36308102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 747
Target Start/End: Complemental strand, 10934739 - 10934676
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtcta 747  Q
    |||||||||||||||| ||||||  |  ||||||||| ||||| |||||||| |||||||||||    
T  10934739 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcta 10934676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 685 - 816
Target Start/End: Original strand, 13211244 - 13211375
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||| || |||||||||||||| | |||||||||  ||| ||| ||||||||||||||||| | | |||    | || ||| ||| |||||||  ||||    
T  13211244 ggtcattaatataagtaaaaatttattttttagatacatttaattaatgatatatgtggtctttattatatgtcacatacatcattaattgaatgtatct 13211343  T
Q  785 aaaaagtagacttttacttataacaatgaccg 816  Q
    ||||| |||| |||||||||||  ||||||||    
T  13211344 aaaaaatagatttttacttatattaatgaccg 13211375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 818
Target Start/End: Complemental strand, 13841984 - 13841850
Alignment:
Q  684 cggtcactattataagtaaaaattcaa-tttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaat 782  Q
    ||||||||||||||| |||| ||| |  ||||||| || |||||||||||||| ||||| || ||| |  ||||| | || ||| ||||||||||| |||    
T  13841984 cggtcactattataaataaatattgacctttttaggttcattcaataaatgatgtatgtagtttatatg-tagactaaatacatcatttattgaatgaat 13841886  T
Q  783 ctaaaaagtagacttttacttataacaatgaccgaa 818  Q
     ||||||||| | |||| ||||||| | ||||||||    
T  13841885 ttaaaaagtaaatttttgcttataatagtgaccgaa 13841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 693 - 748
Target Start/End: Original strand, 18018259 - 18018314
Alignment:
Q  693 ttataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||| ||||||||| ||||||| || ||||| |||||| ||||||||||||||    
T  18018259 ttataagcaaaaattcattttttaggttcattcattaaatgttatatgtggtctat 18018314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 682 - 788
Target Start/End: Original strand, 21435671 - 21435777
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaat-ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataa 780  Q
    ||||||||| | |||| |||||||| |||| ||||| ||| ||||||||||| || |||||||||| | |  ||||||| || ||| ||||||||||| |    
T  21435671 ttcggtcacaaatatatgtaaaaat-caatgttttaaattcattcaataaattatgtatgtggtctttattgtagacaacatacatcatttattgaatga 21435769  T
Q  781 atctaaaa 788  Q
    ||||||||    
T  21435770 atctaaaa 21435777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 684 - 739
Target Start/End: Complemental strand, 36698766 - 36698711
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatat 739  Q
    |||||||||||||||| | ||||||| || || |||| ||||||||||||||||||    
T  36698766 cggtcactattataagcataaattcatttgttggattcattcaataaatgatatat 36698711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 712 - 791
Target Start/End: Original strand, 43295920 - 43295999
Alignment:
Q  712 ttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    ||||||||| ||||||| |||||| ||||||||| || | |||||| | || ||| ||||||||||| ||| ||||||||    
T  43295920 ttttagattcattcaatgaatgatgtatgtggtccatattatagaccacatacatcatttattgaatgaatttaaaaagt 43295999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 687 - 813
Target Start/End: Complemental strand, 2296607 - 2296481
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    |||||||||||||||||| ||    ||||||||| ||||||| ||| || ||  |||||| | | |||||| |||| ||| ||||| ||||| |||||||    
T  2296607 tcactattataagtaaaattttgcattttagattcattcaattaataatgtacatggtctttattatagaccatatacatcatttaatgaatgaatctaa 2296508  T
Q  787 aaagtagacttttacttataacaatga 813  Q
    || ||| | |||| ||||||| |||||    
T  2296507 aatgtaaaattttgcttataataatga 2296481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 685 - 791
Target Start/End: Complemental strand, 2627309 - 2627203
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    ||||| |||||| || ||||||| | ||||||  || |||||||||||| | ||| | |||||| | || ||| | || ||||||||||||||| |||||    
T  2627309 ggtcaatattattagcaaaaattaactttttaagttcattcaataaatggtgtatttagtctatattattgaccaaatacattatttattgaatgaatct 2627210  T
Q  785 aaaaagt 791  Q
    |||||||    
T  2627209 aaaaagt 2627203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 685 - 807
Target Start/End: Original strand, 6614690 - 6614812
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||||||||| |||||||  |  ||||| ||| ||| | ||||| |||||||||||||||   | |||||||||  || ||| |||||||||||      
T  6614690 ggtcactattataaataaaaatcaacattttacattcatttactaaattatatatgtggtctataataaagacaatatatataattaattgaataaatag 6614789  T
Q  785 aaaaagtagacttttacttataa 807  Q
    ||||  |||| ||||||||||||    
T  6614790 aaaatatagatttttacttataa 6614812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 684 - 746
Target Start/End: Complemental strand, 29424119 - 29424057
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtct 746  Q
    ||||||| | |||||| |||||||||  ||||||||| |||||||||||||| ||||| ||||    
T  29424119 cggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtct 29424057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 686 - 748
Target Start/End: Original strand, 33385177 - 33385239
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||| |||||||| |  |||||||||||||   |||||||| ||||||||||||    
T  33385177 gtcactattataaataaaaattaacattttagatttattttttaaatgatgtatgtggtctat 33385239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 686 - 748
Target Start/End: Original strand, 35781233 - 35781295
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||  |||| || | ||||||| || ||||||||||||||||||| |||||||    
T  35781233 gtcactattataaacaaaattttattttttaggttcattcaataaatgatatatgaggtctat 35781295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 689 - 742
Target Start/End: Original strand, 7428901 - 7428954
Alignment:
Q  689 actattataagtaaaaattcaatttttagatttattcaataaatgatatatgtg 742  Q
    ||||||||||| |||||||||  |||||| || |||||||||||||| ||||||    
T  7428901 actattataagcaaaaattcatattttaggttcattcaataaatgatgtatgtg 7428954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 720 - 789
Target Start/End: Complemental strand, 20524266 - 20524197
Alignment:
Q  720 ttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaa 789  Q
    ||||||||| ||||||||||||||| |||   || ||| |||| ||||||| ||||||| ||||||||||    
T  20524266 ttattcaattaatgatatatgtggtttataatatggaccatatacattattaattgaatgaatctaaaaa 20524197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 706 - 791
Target Start/End: Complemental strand, 40372361 - 40372276
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    |||| ||||||| || ||||||||||| || |||||||| |||   |||||| |||||||| ||||||| ||| || |||||||||    
T  40372361 ttcactttttaggttcattcaataaattatgtatgtggtttataatatagactatatgcatcatttattaaatgaacctaaaaagt 40372276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 702 - 791
Target Start/End: Complemental strand, 44838892 - 44838803
Alignment:
Q  702 aaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    |||||| | ||||| |||| ||||||| |||||||||||||||  || | || ||| | || ||| ||| ||||||||||||||||||||    
T  44838892 aaaattgattttttggattcattcaattaatgatatatgtggttcatattatggaccacatacatcattaattgaataaatctaaaaagt 44838803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 120; Significance: 1e-60; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 120; E-Value: 1e-60
Query Start/End: Original strand, 1216 - 1398
Target Start/End: Complemental strand, 209 - 17
Alignment:
Q  1216 aggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 1306  Q
    |||||||||||||||||||||||||||||||||| |         ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  209 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgattatgttcattagattaaatgaggaacatattcctatcatactctct 110  T
Q  1307 caaccactagattannnnnnn-atactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  109 caaccactagattattttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 17  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 68; Significance: 1e-29; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1252 - 1352
Target Start/End: Complemental strand, 9262 - 9162
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattannnnnnnatactatctttcacactctctctt 1351  Q
    |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  9262 aaagttcatcatgtccattagattaaatgatgaacatattcttatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 9163  T
Q  1352 t 1352  Q
    |    
T  9162 t 9162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 68; Significance: 1e-29; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1331 - 1398
Target Start/End: Complemental strand, 27538 - 27471
Alignment:
Q  1331 ctatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 1398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27538 ctatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaa 27471  T

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Target: scaffold0041; HSP #2
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1217 - 1310
Target Start/End: Original strand, 27221 - 27323
Alignment:
Q  1217 ggtgccatttaatttgggaaaggagagttcttttc---------aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 1307  Q
    ||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  27221 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacacattcttatcatactctctc 27320  T
Q  1308 aac 1310  Q
    |||    
T  27321 aac 27323  T

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Target: scaffold0041; HSP #3
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1252 - 1297
Target Start/End: Complemental strand, 27579 - 27534
Alignment:
Q  1252 aaagttgatcatgtccattagattaaatgaggaacatattcctatc 1297  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  27579 aaagttgatcatatccattagattaaatgaggaacatattcctatc 27534  T

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Target: scaffold0148 (Bit Score: 43; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 689 - 814
Target Start/End: Complemental strand, 21252 - 21129
Alignment:
Q  689 actattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaa 788  Q
    ||||||||||| |||  |||| |||||||||| ||| ||||||||||||||||||||||  || ||||| |||| |||  |||||| ||| ||  |||||    
T  21252 actattataagcaaatgttcactttttagattcatttaataaatgatatatgtggtcta--tattagaccatatacatcgtttatttaatgaacttaaaa 21155  T
Q  789 agtagacttttacttataacaatgac 814  Q
    |||  |||||||||||||| ||||||    
T  21154 agtcaacttttacttataataatgac 21129  T

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Target: scaffold0149 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 684 - 788
Target Start/End: Complemental strand, 24742 - 24638
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatc 783  Q
    |||||||||||||||| ||||||| |  ||||||||| ||||| |||||||| ||||||||||||   | ||| ||||| | ||||| ||||||| ||||    
T  24742 cggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctataataaagataatatacgttattaattgaatgaatc 24643  T
Q  784 taaaa 788  Q
    |||||    
T  24642 taaaa 24638  T

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Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 768 - 814
Target Start/End: Original strand, 13000 - 13046
Alignment:
Q  768 atttattgaataaatctaaaaagtagacttttacttataacaatgac 814  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  13000 atttattgaatgaatctaaaaagtaaacttttacttataataatgac 13046  T

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Target: scaffold0294; HSP #2
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 13046 - 12993
Alignment:
Q  686 gtcactattataagtaaaaattcaatttttagatttattcaataaatgatatat 739  Q
    |||| |||||||||||||| || | |||||||||| ||||||||||| ||||||    
T  13046 gtcattattataagtaaaagtttactttttagattcattcaataaattatatat 12993  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 682 - 748
Target Start/End: Original strand, 40455 - 40521
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    ||||||||||||||||| |||||||  |  ||||||||||||||| |||||||| |||| |||||||    
T  40455 ttcggtcactattataaataaaaatcaacattttagatttattcattaaatgatgtatgcggtctat 40521  T

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Target: scaffold0059 (Bit Score: 33; Significance: 0.000000008; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 684 - 748
Target Start/End: Complemental strand, 4509 - 4445
Alignment:
Q  684 cggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||| ||||||||| ||| ||| || ||||| |||||| | ||||||||||||    
T  4509 cggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 4445  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 687 - 806
Target Start/End: Complemental strand, 54521 - 54402
Alignment:
Q  687 tcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaa 786  Q
    |||||| |||||| ||||||||| | |||||||  ||||||| |||||| |||||||||  | | ||| |  |||| ||| ||| |||||||  ||||||    
T  54521 tcactaatataagcaaaaattcactctttagatacattcaattaatgatgtatgtggtccttattatatatcatatacatcattaattgaatgtatctaa 54422  T
Q  787 aaagtagacttttacttata 806  Q
    |||||||| |||| ||||||    
T  54421 aaagtagatttttgcttata 54402  T

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Target: scaffold1640 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold1640
Description:

Target: scaffold1640; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 682 - 748
Target Start/End: Original strand, 1139 - 1205
Alignment:
Q  682 ttcggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||||||||||| |||||| ||  ||||||||| |||||  ||||||| ||||| ||||||    
T  1139 ttcggtcactattataagcaaaaatacacattttagattcattcaccaaatgatgtatgtagtctat 1205  T

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Target: scaffold1266 (Bit Score: 31; Significance: 0.0000001; HSPs: 2)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 244 - 202
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||| |||||||||| |||||||||||||| ||||||||||||    
T  244 ttcactttttagattcattcaataaatgatgtatgtggtctat 202  T

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Target: scaffold1266; HSP #2
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 706 - 791
Target Start/End: Original strand, 156 - 241
Alignment:
Q  706 ttcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatctaaaaagt 791  Q
    |||| |||||||||| ||| ||||||| || ||||||||  || | |||||| | || ||| ||||||||||| ||||||||||||    
T  156 ttcactttttagattcatttaataaattatgtatgtggttcatattatagaccacatacatcatttattgaatgaatctaaaaagt 241  T

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Target: scaffold0470 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 685 - 807
Target Start/End: Original strand, 3976 - 4098
Alignment:
Q  685 ggtcactattataagtaaaaattcaatttttagatttattcaataaatgatatatgtggtctatttaatagacaatatgcattatttattgaataaatct 784  Q
    |||||||||||||| |||||||  |  ||||| ||| ||| | ||||| |||||||||||||||   | |||||||||  || ||| |||||||||||      
T  3976 ggtcactattataaataaaaatcaacattttacattcatttactaaattatatatgtggtctataataaagacaatatatataattaattgaataaatag 4075  T
Q  785 aaaaagtagacttttacttataa 807  Q
    ||||  |||| ||||||||||||    
T  4076 aaaatatagatttttacttataa 4098  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 711 - 749
Target Start/End: Original strand, 42794 - 42832
Alignment:
Q  711 tttttagatttattcaataaatgatatatgtggtctatt 749  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  42794 tttttagatttattcaataaatgatatatttgatctatt 42832  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 707 - 748
Target Start/End: Complemental strand, 6179 - 6138
Alignment:
Q  707 tcaatttttagatttattcaataaatgatatatgtggtctat 748  Q
    |||||||||| ||||||| |||||||||||||| ||||||||    
T  6179 tcaatttttaaatttattaaataaatgatatatatggtctat 6138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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