View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1331_low_15 (Length: 334)
Name: NF1331_low_15
Description: NF1331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1331_low_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 57 - 334
Target Start/End: Complemental strand, 3123809 - 3123531
Alignment:
| Q |
57 |
ccacttagtgaatatgtgaaattcaataaaattaattatgtgataatttcgtcgttcatatccactgttatatttgtattcttatatgtttgtagtttc- |
155 |
Q |
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| T |
3123809 |
ccacttagcgaatatgtgaaattcaataaaattaattatgtgataatttggtcgttcatatccactgttatatttgtattcttatatgtttgtagtttca |
3123710 |
T |
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| Q |
156 |
aaatgttaattaattgagtttagtcagttttannnnnnngcatctaagnnnnnnntaccaatgcagtttgatatgcataatctattttggaaacagattc |
255 |
Q |
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| T |
3123709 |
aaatgttaattaattgagtttagtcagttttatttttttgcatctaagaaaaaaataccattgcagtttgatttgcataatctattttggaaacagattc |
3123610 |
T |
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| Q |
256 |
tacaaacgttggtggcttgctgcattgttcgccatcacacaaagattaaaagacttgctgctgctcgtcgccactattt |
334 |
Q |
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| T |
3123609 |
tagaaacgttggtggcttgctgcgttgttcgccatcacacaaagattaaaagacttgctgctgctcgtcgccactattt |
3123531 |
T |
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