View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1331_low_2 (Length: 777)

Name: NF1331_low_2
Description: NF1331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1331_low_2
NF1331_low_2
[»] chr1 (44 HSPs)
chr1 (58-431)||(8401597-8401971)
chr1 (99-431)||(180024-180357)
chr1 (138-408)||(22348410-22348681)
chr1 (497-777)||(179663-179947)
chr1 (497-777)||(8402035-8402321)
chr1 (497-777)||(22348094-22348376)
chr1 (99-207)||(30802828-30802936)
chr1 (99-207)||(45890152-45890260)
chr1 (658-777)||(18056839-18056960)
chr1 (675-777)||(23319993-23320095)
chr1 (99-207)||(23319459-23319567)
chr1 (99-207)||(18057344-18057452)
chr1 (658-777)||(45889651-45889774)
chr1 (58-149)||(11422200-11422291)
chr1 (58-134)||(4097285-4097361)
chr1 (693-777)||(30802451-30802535)
chr1 (58-132)||(34370315-34370389)
chr1 (58-134)||(23174866-23174942)
chr1 (58-134)||(180365-180441)
chr1 (717-777)||(37639397-37639457)
chr1 (99-149)||(34370255-34370305)
chr1 (58-101)||(23174592-23174635)
chr1 (607-658)||(23319890-23319941)
chr1 (571-613)||(13463828-13463870)
chr1 (717-775)||(35198131-35198189)
chr1 (99-151)||(4097369-4097421)
chr1 (58-101)||(23174723-23174766)
chr1 (99-134)||(23319416-23319451)
chr1 (99-132)||(18057552-18057585)
chr1 (99-148)||(23174950-23174999)
chr1 (99-132)||(31084158-31084191)
chr1 (99-131)||(14229244-14229276)
chr1 (717-777)||(16115906-16115966)
chr1 (618-658)||(18056991-18057031)
chr1 (99-131)||(46590630-46590662)
chr1 (570-613)||(18597088-18597131)
chr1 (570-613)||(18750197-18750240)
chr1 (619-658)||(45889805-45889844)
chr1 (60-101)||(180526-180567)
chr1 (99-132)||(10498009-10498042)
chr1 (99-132)||(23319283-23319316)
chr1 (99-128)||(35197468-35197497)
chr1 (99-128)||(42134016-42134045)
chr1 (99-132)||(45890360-45890393)
[»] chr3 (38 HSPs)
chr3 (58-431)||(50754410-50754784)
chr3 (58-431)||(52986945-52987310)
chr3 (58-431)||(31852514-31852893)
chr3 (497-777)||(52987376-52987660)
chr3 (497-777)||(50754061-50754343)
chr3 (497-696)||(31852242-31852445)
chr3 (607-777)||(51362275-51362448)
chr3 (618-777)||(19385166-19385325)
chr3 (618-777)||(7045148-7045310)
chr3 (99-207)||(51361914-51362022)
chr3 (99-207)||(7044770-7044878)
chr3 (99-207)||(8718662-8718770)
chr3 (99-207)||(9070549-9070657)
chr3 (105-207)||(16276953-16277055)
chr3 (664-777)||(39099252-39099365)
chr3 (99-207)||(19384797-19384905)
chr3 (675-777)||(8718156-8718258)
chr3 (675-777)||(9070043-9070145)
chr3 (695-777)||(16277342-16277424)
chr3 (58-126)||(7044687-7044755)
chr3 (58-134)||(51361831-51361906)
chr3 (58-134)||(19384713-19384789)
chr3 (607-658)||(8718318-8718369)
chr3 (607-658)||(9070205-9070256)
chr3 (58-101)||(51361703-51361746)
chr3 (528-613)||(13603391-13603476)
chr3 (99-135)||(47728923-47728959)
chr3 (571-613)||(1005756-1005799)
chr3 (529-616)||(2216567-2216653)
chr3 (570-613)||(4444346-4444389)
chr3 (99-128)||(8718874-8718903)
chr3 (99-128)||(9070761-9070790)
chr3 (529-613)||(11262296-11262380)
chr3 (90-131)||(12974075-12974116)
chr3 (99-132)||(23756030-23756063)
chr3 (99-132)||(34562654-34562687)
chr3 (99-132)||(41191664-41191697)
chr3 (60-101)||(52986816-52986857)
[»] chr5 (38 HSPs)
chr5 (58-431)||(2826345-2826719)
chr5 (497-777)||(2826792-2827077)
chr5 (497-704)||(34329247-34329454)
chr5 (618-773)||(28070010-28070159)
chr5 (304-431)||(34329520-34329648)
chr5 (99-206)||(25016638-25016745)
chr5 (99-207)||(42512544-42512652)
chr5 (105-207)||(13363330-13363432)
chr5 (99-207)||(23335109-23335216)
chr5 (99-206)||(28069647-28069754)
chr5 (190-280)||(34329690-34329780)
chr5 (675-777)||(13362825-13362927)
chr5 (664-777)||(23335603-23335717)
chr5 (58-134)||(28069563-28069639)
chr5 (58-134)||(34329826-34329902)
chr5 (664-733)||(42512273-42512342)
chr5 (717-777)||(18465506-18465566)
chr5 (658-720)||(25017121-25017185)
chr5 (716-777)||(16668743-16668804)
chr5 (58-101)||(2826214-2826257)
chr5 (607-658)||(23335509-23335560)
chr5 (58-101)||(34330002-34330045)
chr5 (571-613)||(23568465-23568507)
chr5 (616-658)||(25017048-25017090)
chr5 (717-773)||(8948949-8949003)
chr5 (99-132)||(25016505-25016538)
chr5 (99-131)||(703802-703834)
chr5 (99-131)||(4951165-4951197)
chr5 (99-131)||(11376453-11376485)
chr5 (99-131)||(20134271-20134303)
chr5 (573-613)||(29189248-29189288)
chr5 (99-130)||(18464628-18464659)
chr5 (570-613)||(31549542-31549585)
chr5 (99-129)||(13363540-13363570)
chr5 (105-135)||(16552457-16552487)
chr5 (575-613)||(31411810-31411848)
chr5 (575-613)||(31422718-31422756)
chr5 (99-132)||(23334978-23335011)
[»] chr8 (41 HSPs)
chr8 (58-416)||(39657888-39658245)
chr8 (58-431)||(4835985-4836359)
chr8 (58-431)||(4841430-4841804)
chr8 (99-431)||(7058510-7058843)
chr8 (99-431)||(2750427-2750760)
chr8 (497-777)||(4836427-4836711)
chr8 (497-777)||(4841872-4842156)
chr8 (497-756)||(2750101-2750364)
chr8 (497-777)||(8550559-8550837)
chr8 (497-777)||(7058169-7058442)
chr8 (497-689)||(39658269-39658463)
chr8 (273-431)||(8550903-8551062)
chr8 (497-704)||(1208829-1209039)
chr8 (286-431)||(1209110-1209259)
chr8 (658-777)||(32987334-32987455)
chr8 (99-207)||(7614500-7614608)
chr8 (664-774)||(39022033-39022143)
chr8 (99-207)||(39022525-39022633)
chr8 (187-280)||(1209352-1209445)
chr8 (664-777)||(15260748-15260861)
chr8 (693-777)||(7614123-7614207)
chr8 (61-136)||(1209443-1209518)
chr8 (58-132)||(8551103-8551177)
chr8 (106-207)||(15260266-15260367)
chr8 (58-134)||(7058851-7058927)
chr8 (58-134)||(2750768-2750844)
chr8 (717-774)||(15181849-15181906)
chr8 (569-613)||(4838725-4838769)
chr8 (163-207)||(32986924-32986968)
chr8 (571-613)||(36577978-36578020)
chr8 (58-101)||(2751065-2751108)
chr8 (575-613)||(26872669-26872707)
chr8 (575-613)||(26875127-26875165)
chr8 (618-656)||(39022186-39022224)
chr8 (617-658)||(15260666-15260707)
chr8 (61-101)||(1209609-1209649)
chr8 (99-131)||(23504565-23504597)
chr8 (58-101)||(2750889-2750932)
chr8 (58-101)||(2750977-2751020)
chr8 (570-613)||(23091553-23091596)
chr8 (99-132)||(23397199-23397232)
[»] chr7 (42 HSPs)
chr7 (99-431)||(15974265-15974598)
chr7 (497-777)||(15974663-15974946)
chr7 (497-704)||(48305356-48305565)
chr7 (285-431)||(48305629-48305776)
chr7 (497-704)||(48691112-48691323)
chr7 (619-777)||(46573348-46573510)
chr7 (307-431)||(48691388-48691513)
chr7 (99-207)||(30430266-30430374)
chr7 (187-280)||(48305867-48305960)
chr7 (675-777)||(30428928-30429030)
chr7 (99-207)||(33798359-33798467)
chr7 (99-207)||(46024586-46024693)
chr7 (564-704)||(28396842-28396986)
chr7 (676-777)||(46024082-46024183)
chr7 (106-207)||(46572980-46573080)
chr7 (187-277)||(48691561-48691651)
chr7 (693-777)||(33797986-33798070)
chr7 (58-134)||(15974181-15974257)
chr7 (60-134)||(46572891-46572965)
chr7 (58-128)||(48691700-48691770)
chr7 (58-134)||(48306003-48306079)
chr7 (717-777)||(5757442-5757502)
chr7 (58-101)||(46572764-46572807)
chr7 (717-777)||(32090633-32090693)
chr7 (58-101)||(15974050-15974093)
chr7 (570-613)||(559892-559935)
chr7 (570-613)||(569801-569844)
chr7 (570-613)||(4185175-4185218)
chr7 (571-613)||(5200608-5200651)
chr7 (571-613)||(5209737-5209780)
chr7 (570-613)||(17515799-17515842)
chr7 (570-613)||(17537372-17537415)
chr7 (571-613)||(27967395-27967438)
chr7 (571-613)||(27976848-27976891)
chr7 (99-134)||(33798475-33798510)
chr7 (607-658)||(46024236-46024287)
chr7 (58-101)||(48691861-48691904)
chr7 (579-613)||(38411786-38411820)
chr7 (99-132)||(24360521-24360554)
chr7 (99-132)||(32091287-32091320)
chr7 (99-132)||(46024793-46024826)
chr7 (99-136)||(48305958-48305995)
[»] chr6 (25 HSPs)
chr6 (58-431)||(877606-877975)
chr6 (58-431)||(33345651-33346031)
chr6 (497-777)||(24737416-24737701)
chr6 (58-280)||(24736891-24737112)
chr6 (499-763)||(877277-877540)
chr6 (497-777)||(33346098-33346381)
chr6 (273-431)||(24737192-24737351)
chr6 (717-777)||(18611244-18611304)
chr6 (717-777)||(29157281-29157341)
chr6 (529-613)||(3042352-3042435)
chr6 (58-101)||(878063-878106)
chr6 (576-612)||(5995689-5995725)
chr6 (99-131)||(14237850-14237882)
chr6 (529-613)||(20215976-20216059)
chr6 (529-613)||(22109997-22110080)
chr6 (529-613)||(24919128-24919211)
chr6 (58-97)||(878210-878249)
chr6 (570-613)||(24296438-24296481)
chr6 (570-613)||(24310469-24310512)
chr6 (58-101)||(24736760-24736803)
chr6 (570-613)||(27048684-27048727)
chr6 (570-613)||(27058928-27058971)
chr6 (571-613)||(30996958-30997001)
chr6 (99-132)||(18611920-18611953)
chr6 (99-132)||(30909346-30909379)
[»] chr4 (50 HSPs)
chr4 (497-777)||(637909-638190)
chr4 (497-777)||(26447138-26447422)
chr4 (58-280)||(638495-638717)
chr4 (273-431)||(638256-638415)
chr4 (286-431)||(26446927-26447073)
chr4 (618-777)||(51836937-51837101)
chr4 (607-773)||(45256034-45256206)
chr4 (58-207)||(45256465-45256614)
chr4 (99-207)||(18923812-18923920)
chr4 (58-151)||(26577579-26577672)
chr4 (99-207)||(4168911-4169019)
chr4 (99-207)||(51836592-51836700)
chr4 (675-777)||(22181153-22181255)
chr4 (99-207)||(22180649-22180755)
chr4 (99-200)||(27764805-27764906)
chr4 (675-777)||(4168413-4168515)
chr4 (105-207)||(36621232-36621334)
chr4 (676-777)||(27764295-27764396)
chr4 (99-207)||(21097668-21097776)
chr4 (683-777)||(38485590-38485684)
chr4 (664-777)||(21097195-21097308)
chr4 (67-134)||(10473159-10473226)
chr4 (693-777)||(36621627-36621711)
chr4 (59-134)||(26446800-26446875)
chr4 (677-736)||(18923355-18923414)
chr4 (58-121)||(51836510-51836573)
chr4 (61-134)||(38245558-38245631)
chr4 (618-661)||(27764451-27764494)
chr4 (608-658)||(21097349-21097399)
chr4 (618-658)||(4168567-4168607)
chr4 (717-777)||(50563679-50563739)
chr4 (569-613)||(52296728-52296772)
chr4 (58-101)||(10473459-10473502)
chr4 (607-654)||(22181051-22181098)
chr4 (575-613)||(12997531-12997569)
chr4 (99-132)||(27765022-27765055)
chr4 (570-613)||(4749054-4749098)
chr4 (99-131)||(8157182-8157214)
chr4 (618-658)||(18923466-18923506)
chr4 (573-613)||(32215923-32215963)
chr4 (99-131)||(52325243-52325275)
chr4 (99-134)||(4169027-4169062)
chr4 (58-101)||(10473328-10473371)
chr4 (58-97)||(38245738-38245777)
chr4 (98-132)||(1728875-1728909)
chr4 (99-149)||(10473101-10473151)
chr4 (59-101)||(45256699-45256741)
chr4 (99-132)||(18924020-18924053)
chr4 (99-132)||(20862305-20862338)
chr4 (99-132)||(38010649-38010682)
[»] chr2 (38 HSPs)
chr2 (497-777)||(25192947-25193230)
chr2 (497-704)||(4579552-4579763)
chr2 (273-431)||(25193297-25193456)
chr2 (607-777)||(18297947-18298121)
chr2 (304-431)||(4579360-4579488)
chr2 (58-161)||(14550755-14550858)
chr2 (99-207)||(20710318-20710426)
chr2 (99-207)||(18297580-18297688)
chr2 (190-277)||(4579228-4579315)
chr2 (658-777)||(20709829-20709950)
chr2 (58-151)||(2264153-2264246)
chr2 (58-134)||(25193495-25193571)
chr2 (58-135)||(4579149-4579226)
chr2 (58-134)||(18297496-18297572)
chr2 (717-777)||(25995342-25995402)
chr2 (571-620)||(22186082-22186131)
chr2 (58-101)||(2264465-2264508)
chr2 (717-777)||(4281738-4281798)
chr2 (530-609)||(17686391-17686470)
chr2 (611-658)||(20709981-20710028)
chr2 (58-100)||(4579009-4579051)
chr2 (575-613)||(20622454-20622492)
chr2 (529-610)||(28479887-28479967)
chr2 (570-613)||(33308194-33308238)
chr2 (742-777)||(4579793-4579828)
chr2 (58-101)||(14550612-14550655)
chr2 (58-101)||(18297365-18297408)
chr2 (570-613)||(21851547-21851590)
chr2 (570-613)||(21859982-21860025)
chr2 (571-613)||(25262584-25262627)
chr2 (570-613)||(27425297-27425340)
chr2 (570-613)||(27440343-27440386)
chr2 (570-613)||(39756289-39756332)
chr2 (58-100)||(4578749-4578791)
chr2 (58-100)||(4578879-4578921)
chr2 (99-132)||(4281088-4281121)
chr2 (580-613)||(34543055-34543088)
chr2 (99-132)||(41345342-41345375)
[»] scaffold0238 (4 HSPs)
scaffold0238 (618-777)||(25072-25242)
scaffold0238 (106-207)||(24727-24828)
scaffold0238 (60-101)||(24518-24559)
scaffold0238 (58-102)||(24659-24703)
[»] scaffold0194 (3 HSPs)
scaffold0194 (99-207)||(28157-28265)
scaffold0194 (677-770)||(27669-27762)
scaffold0194 (607-658)||(27816-27867)
[»] scaffold0097 (3 HSPs)
scaffold0097 (99-207)||(14157-14265)
scaffold0097 (658-777)||(13668-13789)
scaffold0097 (611-658)||(13820-13867)
[»] scaffold0009 (1 HSPs)
scaffold0009 (99-195)||(203357-203453)
[»] scaffold0338 (3 HSPs)
scaffold0338 (58-134)||(6171-6247)
scaffold0338 (58-101)||(6335-6378)
scaffold0338 (99-136)||(6126-6163)
[»] scaffold1120 (1 HSPs)
scaffold1120 (534-613)||(351-430)
[»] scaffold0206 (1 HSPs)
scaffold0206 (529-613)||(19467-19550)
[»] scaffold0004 (1 HSPs)
scaffold0004 (99-131)||(96139-96171)
[»] scaffold1896 (1 HSPs)
scaffold1896 (575-613)||(437-475)


Alignment Details
Target: chr1 (Bit Score: 319; Significance: 1e-179; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 319; E-Value: 1e-179
Query Start/End: Original strand, 58 - 431
Target Start/End: Original strand, 8401597 - 8401971
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8401597 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcagtttcccagccataaatccctttaac 8401696  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8401697 atcataaagatttcgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcgtctaccactct 8401796  T
Q  258 caaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttca 356  Q
    | |||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  8401797 cgaattcatcaataaatccagaatcggtttagaagaggtagagggagagttcgtacagcctaccacaacaagattcgaaccggatcggaacaacacttca 8401896  T
Q  357 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8401897 acacaacaacaaatccgaaccggatcgaagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 8401971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 99 - 431
Target Start/End: Complemental strand, 180357 - 180024
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  180357 aaaaccattagatgtacttaatggtttctagcagtttcccagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 180258  T
Q  199 accgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatccataatcgagttagaagaggtag 298  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||  |||||||||||||    
T  180257 actgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcgaattcgtcaataaatccagaatcggtttagaagaggtag 180158  T
Q  299 agggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaa 397  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  180157 agggagagtttgtacagcctaccacaacaagattcgaaccggatcggaacaacacttcaacataacaaaaattccgaaccggatcggagaagaagaccaa 180058  T
Q  398 aacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||||||||||||||||    
T  180057 aacgcgaaacggatccgtgaagaacaagaggtag 180024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 138 - 408
Target Start/End: Complemental strand, 22348681 - 22348410
Alignment:
Q  138 cagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcaca 237  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  22348681 cagccataaatccctctaatatcacaaagatttcgaatccagtaagaacttcagatctgaaaccgtgaaactcatgaacattaaaccacagaaaatcaca 22348582  T
Q  238 taaacatcatctaccactctcaaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaac 337  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||| ||||||| ||||||||    
T  22348581 taaacatcatctaccactctcgaattcatcaataaatccagaatcgatttagaagaggtagagggagagtttatacagcctactacaacaagattcgaac 22348482  T
Q  338 c-gatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacg 408  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22348481 cggatcggaacaacacttcaacataacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacg 22348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 497 - 777
Target Start/End: Complemental strand, 179947 - 179663
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  179947 agaaatctaagacgatatttgaaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggatggagttttgaactccggcgcggtggtg 179848  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgag 692  Q
    ||||||||||||| ||| ||  |||||||||||||||||| || ||||||||||||||||||||||||||||||    ||| ||||||||||||||||||    
T  179847 ccaccaccggccatcgcgccgaaatcatcatgtgtggccgaaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgag 179748  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||  |  ||||||||||||||||||||| |||||||||||    
T  179747 agaaatgttttaagcaaatgaagtttgatttggtgtagtttgagaagcttgggattattacacgtgtacactagatctgatggtt 179663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 8402035 - 8402321
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||| | ||| |||    
T  8402035 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgcctaaaaccgtgaaaactttttgatttggatgaagttttgaactccggtgtggtggtg 8402134  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgt------agagagagagtgctttatgttttagtg 690  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||      |||||||||| ||||||||||||||||    
T  8402135 ccaccaccggccaccgcgccggaatcatcatgtttggccggaaaagatgaagactcatctgaattgtagagagagagagagagagctttatgttttagtg 8402234  T
Q  691 agagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| |  ||| |||||||||| |||||||||| |||||||||||    
T  8402235 agagaaatgtttgaagcagatgaagtttgatttggtttagtttgagaaacctaggattattacatgtgtacactagatctgatggtt 8402321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 497 - 777
Target Start/End: Complemental strand, 22348376 - 22348094
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| |||||||||||  ||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||    
T  22348376 agaaatctaaggcgatatttggaattgacacaaaat--gatgtctaaaaccgtgaaaacattttgatttggacggagttttgaactccgacgcagtggtg 22348279  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgag 692  Q
    |||||||||||||||||    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |    |||||||||||||||||    
T  22348278 ccaccaccggccaccgcggtggaatcatcatgtgtggccggaagagatgaagactcatatgaattgtagagagagagggagagctttatgttttagtgag 22348179  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| || ||||||||    
T  22348178 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatatgatggtt 22348094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 30802936 - 30802828
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  30802936 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctttaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 30802837  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  30802836 accgtgaac 30802828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 45890260 - 45890152
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  45890260 aaaaccattagatgtacttaatggtttccagcagtttcccagcgataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 45890161  T
Q  199 accgtgaac 207  Q
    | |||||||    
T  45890160 atcgtgaac 45890152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 658 - 777
Target Start/End: Complemental strand, 18056960 - 18056839
Alignment:
Q  658 aattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 755  Q
    ||||||||||||||  || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  18056960 aattgtagagagagggagagttttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacac 18056861  T
Q  756 gtgtacactaaatctgatggtt 777  Q
    |||||||||| |||||||||||    
T  18056860 gtgtacactagatctgatggtt 18056839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 675 - 777
Target Start/End: Original strand, 23319993 - 23320095
Alignment:
Q  675 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 774  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  23319993 gctttatgttttagtgagagaaatgtttaaagcaaatgaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatg 23320092  T
Q  775 gtt 777  Q
    |||    
T  23320093 gtt 23320095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 23319459 - 23319567
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||    
T  23319459 aaaaccattagatgtacttaatggtttccagcagtttcccagccataaatccctaaaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 23319558  T
Q  199 accgtgaac 207  Q
    ||| |||||    
T  23319559 accatgaac 23319567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 18057452 - 18057344
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||  | |||||| |||||||||||||||||||||||||||    
T  18057452 aaaaccattagatgtacttaatggtttccaacagttttctagccataaatccctctaacatcgcagagatttcgaatccagtaacaacttcagatctgaa 18057353  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  18057352 accgtgaac 18057344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 658 - 777
Target Start/End: Complemental strand, 45889774 - 45889651
Alignment:
Q  658 aattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattac 753  Q
    |||||||||||||||| |    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| || |||||||||||||    
T  45889774 aattgtagagagagagggagaactttatgttttagtgagagaaatgtttgaaggaaatgaaatttgatttggtgtagtttgagaagcctaagattattac 45889675  T
Q  754 acgtgtacactaaatctgatggtt 777  Q
    || |||| |||| |||||||||||    
T  45889674 acatgtatactagatctgatggtt 45889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 11422291 - 11422200
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatc 149  Q
    ||||||||| ||| |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11422291 catcatcactgtatcggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcagtttcccagccataaatc 11422200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 4097285 - 4097361
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4097285 catcatcaccgtaccggaatgccaaaacaattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 4097361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 693 - 777
Target Start/End: Complemental strand, 30802535 - 30802451
Alignment:
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  30802535 agaaatatttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaagattattacacgtgtacactagatctgatggtt 30802451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 34370389 - 34370315
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcag 132  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  34370389 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcag 34370315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 23174866 - 23174942
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  23174866 catcatcaccgtaccgaaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcagtt 23174942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 180441 - 180365
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  180441 catcatcactgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggttttcagcagtt 180365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 37639457 - 37639397
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||| |||||||||||    
T  37639457 ttgatttggtgtagtttgagaagtctataattattacacgtgtacactagatctgatggtt 37639397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 34370305 - 34370255
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatc 149  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  34370305 aaaaccattagatgtacttaatagtttccagcagtttcccagccataaatc 34370255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 23174592 - 23174635
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  23174592 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaa 23174635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 658
Target Start/End: Original strand, 23319890 - 23319941
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    ||||||| || |||||||||||||||||||||| ||||||||||||||||||    
T  23319890 ccaccgcgccggaatcatcatgtgtggccggaagagatgaagactcatctga 23319941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 613
Target Start/End: Original strand, 13463828 - 13463870
Alignment:
Q  571 gagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  13463828 gagttttgaactccggcgcggtggtgccaccaccggccaccgc 13463870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 775
Target Start/End: Original strand, 35198131 - 35198189
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatgg 775  Q
    ||||||| |||||||||||  |||||| ||||||||||||||||||||| |||||||||    
T  35198131 ttgattttgtgtagtttgaaaagtctaggattattacacgtgtacactagatctgatgg 35198189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 4097369 - 4097421
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccc 151  Q
    |||| ||||||||||||||||| ||||||| || |||||||||||||||||||    
T  4097369 aaaaccattagatgtacttaatagtttccatcaatttcccagccataaatccc 4097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 23174723 - 23174766
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  23174723 catcatcaccgtatcggaatgccaaaaccattttgttgtggaaa 23174766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 23319416 - 23319451
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||||||||||||||||||||||||||||||    
T  23319416 aaaatcattagatgtacttaatggtttccagcagtt 23319451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 18057585 - 18057552
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    ||||||||||||||||||||||||||||||||||    
T  18057585 aaaatcattagatgtacttaatggtttccagcag 18057552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 23174950 - 23174999
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaat 148  Q
    |||| |||||||| ||||||||||||||||||| |||| |||||||||||    
T  23174950 aaaaccattagatatacttaatggtttccagcaatttcgcagccataaat 23174999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 31084191 - 31084158
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    ||||||||||||||||||||||||||||||||||    
T  31084191 aaaatcattagatgtacttaatggtttccagcag 31084158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 14229244 - 14229276
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  14229244 aaaatcattagatgtacttaatggtttccagca 14229276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 16115966 - 16115906
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||||||||||||| || |||||  |||||||||||||||||| || || ||||||||    
T  16115966 ttgatttggtgtagtttaagaagtcttggattattacacgtgtacattagatttgatggtt 16115906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 618 - 658
Target Start/End: Complemental strand, 18057031 - 18056991
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  18057031 gaatcatcatgtgtggccggaagagataaagactcatctga 18056991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 46590630 - 46590662
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  46590630 aaaatcattagatgtacttaatggtttccagca 46590662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Original strand, 18597088 - 18597131
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  18597088 ggagtttcgaactccggcgcggtggtgccaccgccggccaccgc 18597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Original strand, 18750197 - 18750240
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  18750197 ggagtttgaaactccggcgcggtggtgccaccaccggccaccgc 18750240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 658
Target Start/End: Complemental strand, 45889844 - 45889805
Alignment:
Q  619 aatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  45889844 aatcatcatttgtggccggaagagatgaagactcatctga 45889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 180567 - 180526
Alignment:
Q  60 tcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||| |||||||||||  ||||||||    
T  180567 tcatcaccgtaccggaatgccaaaaccatttttctgtggaaa 180526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 10498042 - 10498009
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||||||||||||||||||||||||||| |||||    
T  10498042 aaaatcattagatgtacttaatggtttctagcag 10498009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 23319283 - 23319316
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  23319283 aaaaccattagatgtacttaatggtttccagcag 23319316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 35197468 - 35197497
Alignment:
Q  99 aaaatcattagatgtacttaatggtttcca 128  Q
    ||||||||||||||||||||||||||||||    
T  35197468 aaaatcattagatgtacttaatggtttcca 35197497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 42134016 - 42134045
Alignment:
Q  99 aaaatcattagatgtacttaatggtttcca 128  Q
    ||||||||||||||||||||||||||||||    
T  42134016 aaaatcattagatgtacttaatggtttcca 42134045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 45890393 - 45890360
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    ||||||||||||||||||||||||||||| ||||    
T  45890393 aaaatcattagatgtacttaatggtttccggcag 45890360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 58 - 431
Target Start/End: Complemental strand, 50754784 - 50754410
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50754784 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcagtttcccagccataaatccctataac 50754685  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  50754684 atcacaaagatttcgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcctctatcactct 50754585  T
Q  258 caaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttca 356  Q
    | |||||||||||||||| | |||||  ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  50754584 cgaattcatcaataaatctagaatcggtttagaagaggtagagggagagtttgtacagcctaccacaacaagatttgaaccagatcggaacaacacttca 50754485  T
Q  357 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50754484 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 50754410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 58 - 431
Target Start/End: Original strand, 52986945 - 52987310
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  52986945 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagtagtttcccagccataaatccctctaac 52987044  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||  |||||||| ||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  52987045 atcgcaaagatttcgaatccaataacaacttcagatctgaaaccgtgaa---------cactaaaccacagaaaatcacataaacatcatctaccactct 52987135  T
Q  258 caaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttca 356  Q
    ||||||| |  ||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| |    
T  52987136 caaattcgtttataaatccagaatcggtttagaagaggtagagggagagttcgtacaacctaccacaacaagattcgaaccggatcggaacaacacttga 52987235  T
Q  357 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  52987236 acacaacaacaaatccgaaccggatccgagaagaagaccaaaacgcgaaacagatccgtgaagaacaagaggtag 52987310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 58 - 431
Target Start/End: Complemental strand, 31852893 - 31852514
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31852893 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaaaccattagatgtacttaatggtttccaacagtttcccagccataaatccctctaac 31852794  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31852793 atcacaaagattttgattccaataacaacttcagatctaaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctacccctct 31852694  T
Q  258 caaattcatcaat------------aaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcgg 344  Q
    | |||||||||||            | ||||| |||||  ||||||||||||||||||||||||  ||     || ||||||| ||| ||||| |||||     
T  31852693 cgaattcatcaatagatccagaagaatatccagaatcggtttagaagaggtagagggagagttc-aac-----acaacaacaagatttgaaccggatcga 31852600  T
Q  345 aacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31852599 aacaacacttcaacacaac-acaaatctgaaccggatcggagaagaagaccaaaacgcgaaacggatctgtgaagaacaagaggtag 31852514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 52987376 - 52987660
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||| |||    
T  52987376 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtaaaaactttttgatttggatgcagttttgaactccggcgcggtggtg 52987475  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgag 692  Q
    ||||||||| ||||||| || ||||||||||||||||||| || ||||||||||||||||||||||||||||||    ||| ||||||||||||||||||    
T  52987476 ccaccaccgaccaccgcgccggaatcatcatgtgtggccgaaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgag 52987575  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||    
T  52987576 agaaatatttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggtt 52987660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 497 - 777
Target Start/End: Complemental strand, 50754343 - 50754061
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  50754343 agaaatctaaggcgatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggtgcggtggtg 50754244  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga--gagtgctttatgttttagtgagag 694  Q
     ||||||||||||| || || |||||||||||||||| ||||| |||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  50754243 tcaccaccggccactgcgccggaatcatcatgtgtggtcggaagagattaagactcatctgaattgtagagagagggagagctttatgttttagtgagag 50754144  T
Q  695 aaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    || |||||||| |||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||    
T  50754143 aagtgtttgaatcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggtt 50754061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 497 - 696
Target Start/End: Complemental strand, 31852445 - 31852242
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||    
T  31852445 agaaatctaagacgatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccagcgcagtggtg 31852346  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgag 692  Q
    ||||||||||||||||| ||  |||| ||||||||| || ||| ||||||||||||||||||| ||||||||||||| |    |||||||||||||||||    
T  31852345 ccaccaccggccaccgcgccgaaatcgtcatgtgtgccctgaagagatgaagactcatctgaactgtagagagagagggagaactttatgttttagtgag 31852246  T
Q  693 agaa 696  Q
    ||||    
T  31852245 agaa 31852242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 607 - 777
Target Start/End: Original strand, 51362275 - 51362448
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtgc---tttatgttttagtgagagaaatgtttg 703  Q
    |||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||||    
T  51362275 ccaccgcgtcagaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagagagagggaaagtttatgttttagtgagagaaatgtttg 51362374  T
Q  704 aagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||    
T  51362375 aagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactaaatctgatggtt 51362448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 618 - 777
Target Start/End: Original strand, 19385166 - 19385325
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtt 717  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||| |||||||||||||||||    
T  19385166 gaatcatcatctgtggccggaagagatgaagactcatctgaattgtagagagggagagttttatgttttagtgagggaaatgattgaagcaaatgaagtt 19385265  T
Q  718 tgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||| ||||||||||| || |||  ||||||||||||||||||||||||||||||||    
T  19385266 tgatttgatgtagtttgagaagcctagaattattacacgtgtacactaaatctgatggtt 19385325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 618 - 777
Target Start/End: Original strand, 7045148 - 7045310
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgagagaaatgtttgaagcaaatga 713  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||    ||| ||||||||||||||||||||||||||||||||||||| |    
T  7045148 gaatcatcatgtgtggctggaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaat-a 7045246  T
Q  714 agtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||||||| |||||| |||| || ||| ||||||||||||||||||||| |||||||||||    
T  7045247 agtttgatttgatgtagtctgagaagcctacgattattacacgtgtacactagatctgatggtt 7045310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 51361914 - 51362022
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  51361914 aaaatcattagatgtacttaatggtttccagcagttttccagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcatatctgaa 51362013  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  51362014 accgtgaac 51362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 7044770 - 7044878
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  7044770 aaaaccattagatgtacttaatggtttccagcagtttccctgccataaatccctctaacataacaaagatttcgaatccagtaacaacttcagatctgaa 7044869  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  7044870 accgtgaac 7044878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 8718770 - 8718662
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  8718770 aaaattattagatgtacttaatggtttccagtagtttcccagccataaatccctctaacatcacaaagtttttgaatccaataacaacttcagatctgaa 8718671  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  8718670 accgtgaac 8718662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 9070657 - 9070549
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  9070657 aaaattattagatgtacttaatggtttccagtagtttcccagccataaatccctctaacatcacaaagtttttgaatccaataacaacttcagatctgaa 9070558  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  9070557 accgtgaac 9070549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 16276953 - 16277055
Alignment:
Q  105 attagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaaaccgtg 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  16276953 attagatgtacttaatggtttccagcagtttcccggccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctaaaaccgtg 16277052  T
Q  205 aac 207  Q
    |||    
T  16277053 aac 16277055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 664 - 777
Target Start/End: Complemental strand, 39099365 - 39099252
Alignment:
Q  664 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 763  Q
    |||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| || ||| |||||||||||||||||||    
T  39099365 agagagggagagctttatgttttagtgagagaaatgttttaaacaaatgaagtttgatttagtgtagtttgagaagcctaggattattacacgtgtacac 39099266  T
Q  764 taaatctgatggtt 777  Q
    || |||||||||||    
T  39099265 tagatctgatggtt 39099252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 19384797 - 19384905
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||    
T  19384797 aaaaccattagatatacttaatggtttccagcagtttcccaaccataaattcctctaacatcacaaagattttgaatctagtaacaacttcagatcttaa 19384896  T
Q  199 accgtgaac 207  Q
    || ||||||    
T  19384897 actgtgaac 19384905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 675 - 777
Target Start/End: Complemental strand, 8718258 - 8718156
Alignment:
Q  675 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 774  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || || ||| ||||||||||| ||||||||| ||||||||    
T  8718258 gctttatgttttagtgagagaaatgttttaaacaaatgaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatg 8718159  T
Q  775 gtt 777  Q
    |||    
T  8718158 gtt 8718156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 675 - 777
Target Start/End: Complemental strand, 9070145 - 9070043
Alignment:
Q  675 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 774  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || || ||| ||||||||||| ||||||||| ||||||||    
T  9070145 gctttatgttttagtgagagaaatgttttaaacaaatgaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatg 9070046  T
Q  775 gtt 777  Q
    |||    
T  9070045 gtt 9070043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 695 - 777
Target Start/End: Original strand, 16277342 - 16277424
Alignment:
Q  695 aaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||| || ||||||||    
T  16277342 aaatgtttgaaacaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatatgatggtt 16277424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 7044687 - 7044755
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttc 126  Q
    |||||||||||||||||||||| |||||||||||| | ||||||| |||||||||||||||||||||||    
T  7044687 catcatcaccgtaccggaatgccaaaaccattttgctatggaaaaccattagatgtacttaatggtttc 7044755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 51361831 - 51361906
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  51361831 catcatcac-gtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccaacagtt 51361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 19384713 - 19384789
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||| ||| || |||||    
T  19384713 catcatcaccgtaccggaatgccaaaaccattttattgtgtaaaaccattagatgtacttaatgattttcaacagtt 19384789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 658
Target Start/End: Complemental strand, 8718369 - 8718318
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    ||||||| || |||||||||||||||||||||| ||||||||||||||||||    
T  8718369 ccaccgcgccggaatcatcatgtgtggccggaagagatgaagactcatctga 8718318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 658
Target Start/End: Complemental strand, 9070256 - 9070205
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    ||||||| || |||||||||||||||||||||| ||||||||||||||||||    
T  9070256 ccaccgcgccggaatcatcatgtgtggccggaagagatgaagactcatctga 9070205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 51361703 - 51361746
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  51361703 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaa 51361746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 613
Target Start/End: Complemental strand, 13603476 - 13603391
Alignment:
Q  528 aaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||| ||||| ||| || | |||||||||||| ||||||||  || |||||||||||| ||||||||| ||||||||||    
T  13603476 aaaaaaggatgtttaaaaacgtaaataatttttgatttgg-cggagtttgaaaactccggcgcggtggtgccaccatcggccaccgc 13603391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 47728959 - 47728923
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagttt 135  Q
    |||| ||||||||||||||||||||||||||||||||    
T  47728959 aaaaccattagatgtacttaatggtttccagcagttt 47728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 613
Target Start/End: Complemental strand, 1005799 - 1005756
Alignment:
Q  571 gagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  1005799 gagttttgaaactccggcgcggtggtgccaccaccggccaccgc 1005756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 2216653 - 2216567
Alignment:
Q  529 aaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtgccaccaccggccaccgcacc 616  Q
    ||||||||||| |||||   | |||| ||||||| | ||| |||||||  |||||||||||||| | |||||||||||||||||||||    
T  2216653 aaaaaggatgtttaaaaatataaaaagtttttgaatcgga-ggagtttgaaactccggcgcggtggcgccaccaccggccaccgcacc 2216567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Original strand, 4444346 - 4444389
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||    
T  4444346 ggagttttgaactccggcgtggtggtgccaccgccggccaccgc 4444389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 8718903 - 8718874
Alignment:
Q  99 aaaatcattagatgtacttaatggtttcca 128  Q
    ||||||||||||||||||||||||||||||    
T  8718903 aaaatcattagatgtacttaatggtttcca 8718874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 9070790 - 9070761
Alignment:
Q  99 aaaatcattagatgtacttaatggtttcca 128  Q
    ||||||||||||||||||||||||||||||    
T  9070790 aaaatcattagatgtacttaatggtttcca 9070761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 613
Target Start/End: Complemental strand, 11262380 - 11262296
Alignment:
Q  529 aaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactcc-ggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||| ||||| ||| |||| ||||||| | ||| |||||||  |||||| |||||||| | ||||||||||||||||||    
T  11262380 aaaaaggatgtttaaaaacgtaaaaagtttttgaatcgga-ggagtttaaaactcccggcgcggtggcgccaccaccggccaccgc 11262296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 12974075 - 12974116
Alignment:
Q  90 ttgttgtggaaaatcattagatgtacttaatggtttccagca 131  Q
    ||||| || ||||||||| |||||||||||||||||||||||    
T  12974075 ttgttctgcaaaatcattcgatgtacttaatggtttccagca 12974116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 23756063 - 23756030
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  23756063 aaaaccattagatgtacttaatggtttccagcag 23756030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 34562654 - 34562687
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  34562654 aaaaccattagatgtacttaatggtttccagcag 34562687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 41191664 - 41191697
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    ||||||||||||||||| ||||||||||||||||    
T  41191664 aaaatcattagatgtacataatggtttccagcag 41191697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 52986816 - 52986857
Alignment:
Q  60 tcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||| |||||||||||  ||||||||    
T  52986816 tcatcaccgtaccggaatgccaaaaccattttactgtggaaa 52986857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 58 - 431
Target Start/End: Original strand, 2826345 - 2826719
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2826345 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaaacgattagatgtacttaatggtttccaacagtttcccagccataaatccctctaac 2826444  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2826445 atcacaaagattttgaatccagtaacaacttcagatctaaaaccgtgaacctcatgaacactaaaccatagaaaatcacataaacatcatctaccactct 2826544  T
Q  258 caaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttca 356  Q
    | ||||| |||||||||||||||||   ||||||||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||    
T  2826545 cgaattcgtcaataaatccataatcagtttagaagaggtagagggagagttcgtacaacctaccacgacaagattcgaaccggatcggaacaacacttca 2826644  T
Q  357 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  2826645 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgtgaaatgggtccgtgaagaacaagaggtag 2826719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 2826792 - 2827077
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||| |||    
T  2826792 agaaatctaaggcgatatttgaaatcaacacaaaaaaggatgtctaaaaccgtaatttttttttgatttggacggagttttgaactccggcgcggtggtg 2826891  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccg---gaaaagatgaagactcatctgaattgtagagagag--agtgctttatgttttagtga 691  Q
    |||||||||||||| ||  | |||||||||||| ||||||   ||| |||||||||||||| ||||||||||||||||  || |||||||||||||||||    
T  2826892 ccaccaccggccactgcgtcggaatcatcatgtatggccgccggaagagatgaagactcatttgaattgtagagagagggagagctttatgttttagtga 2826991  T
Q  692 gagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    || |||||||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||||||| |||||||||||    
T  2826992 gataaatgtttgaagcaaatgaaatttgatttggtgtagtttgagaagcctaagataattacacgtgtacactagatctgatggtt 2827077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 497 - 704
Target Start/End: Complemental strand, 34329454 - 34329247
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||| | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  34329454 agaaatctaagacgatatttggaatcaacacaaaaaaggatgtttgaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggtggta 34329355  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtgctttatgttttagtgagagaa 696  Q
    |||||  ||||| |||  ||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  34329354 ccaccggcggccgccgtgccgaaatcatcatgtgtggccggaagagatgaagacccatctgaattgtagagagagagagctttatgttttagtgagagaa 34329255  T
Q  697 atgtttga 704  Q
    ||||||||    
T  34329254 atgtttga 34329247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 618 - 773
Target Start/End: Original strand, 28070010 - 28070159
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtt 717  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||    
T  28070010 gaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagag------ctttatgttttagtgagagaaatgtttgaagcaaatgaagtt 28070103  T
Q  718 tgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgat 773  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  28070104 tgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgat 28070159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 304 - 431
Target Start/End: Complemental strand, 34329648 - 34329520
Alignment:
Q  304 gagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaaaacgc 402  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34329648 gagttcgtacaacctaccacaacaagattcgaaccagatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaaaacgc 34329549  T
Q  403 gaaacggatccgtgaagaacaagaggtag 431  Q
    |||||||||||||||||||||||| ||||    
T  34329548 gaaacggatccgtgaagaacaagatgtag 34329520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 25016638 - 25016745
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  25016638 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaattcctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 25016737  T
Q  199 accgtgaa 206  Q
    || |||||    
T  25016738 actgtgaa 25016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 42512652 - 42512544
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||    
T  42512652 aaaaccattagatgtacttaatggtttcgagcagtttcccagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatatgaa 42512553  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  42512552 accgtgaac 42512544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 13363432 - 13363330
Alignment:
Q  105 attagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaaaccgtg 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  13363432 attagatgtacttaatggtttccagtagtttcccagccataaatccctctaacatcacaaagatttcgaatccaataacaacttcagatctgaaaccgtg 13363333  T
Q  205 aac 207  Q
    |||    
T  13363332 aac 13363330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 23335109 - 23335216
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  23335109 aaaaccattagatgtacttaatggtttccagc-gtttcccagccataaatccctctaacatcacaaagattttgaatccagtttcaacttcagatctgaa 23335207  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  23335208 accgtgaac 23335216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 28069647 - 28069754
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  28069647 aaaaccattagatgtacttaatagtttccagcagtttcccatccataaatccctctaacataaaaaagatttcgaatccagtaacaacttcagatctgaa 28069746  T
Q  199 accgtgaa 206  Q
    ||||||||    
T  28069747 accgtgaa 28069754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 34329780 - 34329690
Alignment:
Q  190 agatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatccataa 280  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34329780 agatctgaaaccgtgaaccgaatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatccataa 34329690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 675 - 777
Target Start/End: Complemental strand, 13362927 - 13362825
Alignment:
Q  675 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 774  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||    
T  13362927 gctttatgttttagtgagagaaatgtttgaagcaaatgaattttgatttggtgtagtttgagaagcctatgattattacacgtatacactagatctgatg 13362828  T
Q  775 gtt 777  Q
    |||    
T  13362827 gtt 13362825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 664 - 777
Target Start/End: Original strand, 23335603 - 23335717
Alignment:
Q  664 agagagagagtgctttatgtttt-agtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtaca 762  Q
    |||||| ||| |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  23335603 agagagggagagctttatgtttttagtgagagaaatgtttgatgcaaatgaactttgatttggtgtagtttgagaagcctatgattattacacgtgtaca 23335702  T
Q  763 ctaaatctgatggtt 777  Q
    ||| |||||||||||    
T  23335703 ctagatctgatggtt 23335717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 28069563 - 28069639
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  28069563 catcatcaccgtactggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcagtt 28069639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 34329902 - 34329826
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||||||||| |||||| |||||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  34329902 catcatcaccgtaccagaatgccaaaaccattttgctttggaaaaccattagatgtacttaatggtttccagcagtt 34329826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 664 - 733
Target Start/End: Complemental strand, 42512342 - 42512273
Alignment:
Q  664 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagttt 733  Q
    |||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42512342 agagagggagagctttaggttttagtgagagaaatgtttgaagtaaatgaagtttgatttggtgtagttt 42512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 18465506 - 18465566
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18465506 ttgatttggtgtagtttgagaagtctaagattattacacgtgtacactagatctgatggtt 18465566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 720
Target Start/End: Original strand, 25017121 - 25017185
Alignment:
Q  658 aattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttga 720  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  25017121 aattgtagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttga 25017185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 716 - 777
Target Start/End: Original strand, 16668743 - 16668804
Alignment:
Q  716 tttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||    
T  16668743 tttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggtt 16668804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 2826214 - 2826257
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  2826214 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaa 2826257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 658
Target Start/End: Original strand, 23335509 - 23335560
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    ||||||| || ||||||||||||||||| |||| ||||||||||||||||||    
T  23335509 ccaccgcgccggaatcatcatgtgtggctggaagagatgaagactcatctga 23335560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 34330045 - 34330002
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  34330045 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaa 34330002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 613
Target Start/End: Original strand, 23568465 - 23568507
Alignment:
Q  571 gagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  23568465 gagttttgaactccggcgcggtgatgccaccaccggccaccgc 23568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 616 - 658
Target Start/End: Original strand, 25017048 - 25017090
Alignment:
Q  616 cagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  25017048 cagaatcatcatgtgttgccggaagagatgaagactcatctga 25017090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 773
Target Start/End: Complemental strand, 8949003 - 8948949
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgat 773  Q
    |||||||||||||||||||| || ||| ||||||  |||||||||||||||||||||    
T  8949003 ttgatttggtgtagtttgagaagcctaggattat--cacgtgtacactaaatctgat 8948949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 25016505 - 25016538
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    ||||||||||||||||||||||||||||||||||    
T  25016505 aaaatcattagatgtacttaatggtttccagcag 25016538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 703802 - 703834
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  703802 aaaatcattagatgtacttaatggtttccagca 703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 4951197 - 4951165
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  4951197 aaaatcattagatgtacttaatggtttccagca 4951165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 11376453 - 11376485
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  11376453 aaaatcattagatgtacttaatggtttccagca 11376485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 20134271 - 20134303
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  20134271 aaaatcattagatgtacttaatggtttccagca 20134303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 573 - 613
Target Start/End: Original strand, 29189248 - 29189288
Alignment:
Q  573 gttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  29189248 gttttgaactcaggcgcggtggtgccaccaccggccaccgc 29189288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 18464628 - 18464659
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagc 130  Q
    ||||||||||||||||||||||||||||||||    
T  18464628 aaaatcattagatgtacttaatggtttccagc 18464659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 31549585 - 31549542
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  31549585 ggagtttaaaactccggcgcggtggtgccaccaccggccaccgc 31549542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 129
Target Start/End: Complemental strand, 13363570 - 13363540
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccag 129  Q
    |||||||||||||||||||||||||||||||    
T  13363570 aaaatcattagatgtacttaatggtttccag 13363540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 135
Target Start/End: Original strand, 16552457 - 16552487
Alignment:
Q  105 attagatgtacttaatggtttccagcagttt 135  Q
    |||||||||||||||||||||||||||||||    
T  16552457 attagatgtacttaatggtttccagcagttt 16552487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 613
Target Start/End: Original strand, 31411810 - 31411848
Alignment:
Q  575 tttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  31411810 tttgaactccggtgcggtggtgccaccaccggccaccgc 31411848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 613
Target Start/End: Original strand, 31422718 - 31422756
Alignment:
Q  575 tttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  31422718 tttgaactccggcgcagtggtgccaccaccggccaccgc 31422756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 23334978 - 23335011
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  23334978 aaaaccattagatgtacttaatggtttccagcag 23335011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 58 - 416
Target Start/End: Original strand, 39657888 - 39658245
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| ||||  |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39657888 catcatcaccgtaccggaatgccaaaaa-attttgctgtggaaaaccattagatgtacttaatggtttcaagcagtttcccagccataaatccctctaac 39657986  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39657987 atcacaaagatttcgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 39658086  T
Q  258 caaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttca 356  Q
    | ||||||||||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  39658087 cgaattcatcaataaattcataatcg-tttagaagaggtagagggagagtttgtacagcctaccacaacaagattcgaaccggatcggaacaacacttca 39658185  T
Q  357 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtg 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39658186 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtg 39658245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 58 - 431
Target Start/End: Original strand, 4835985 - 4836359
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4835985 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaaaccattagatgtacttaatggtttccagcagtttcccagccataaatccctctaat 4836084  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| |||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4836085 atcacaaagatttcgaatccagtaacaacttcagatttgaaactgtgatcctcatgaacactaaaccacataaaatcacataaacatcatctaccactct 4836184  T
Q  258 caaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttca 356  Q
    | ||||| |||||||||||| |||||  ||||||||||||   |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  4836185 cgaattcgtcaataaatccagaatcggtttagaagaggtacgcggagagttcgtacagcctaccacaacaagattcgaaccggatcggaacaacacttca 4836284  T
Q  357 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  4836285 acacaacaacaaatccgaaccagatcggagaagaagaccaaaacacgaaacgaatccgtgaagaacaagaggtag 4836359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 58 - 431
Target Start/End: Original strand, 4841430 - 4841804
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4841430 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaaaccattagatgtacttaatggtttccagcagtttcccagccataaatccctctaat 4841529  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| |||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4841530 atcacaaagatttcgaatccagtaacaacttcagatttgaaactgtgatcctcatgaacactaaaccacataaaatcacataaacatcatctaccactct 4841629  T
Q  258 caaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttca 356  Q
    | ||||| |||||||||||| |||||  ||||||||||||   |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  4841630 cgaattcgtcaataaatccagaatcggtttagaagaggtacgcggagagttcgtacagcctaccacaacaagattcgaaccggatcggaacaacacttca 4841729  T
Q  357 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  4841730 acacaacaacaaatccgaaccagatcggagaagaagaccaaaacacgaaacgaatccgtgaagaacaagaggtag 4841804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 99 - 431
Target Start/End: Complemental strand, 7058843 - 7058510
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  7058843 aaaaccattagatgtacttaatggtttccagcagtttcccaaccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 7058744  T
Q  199 accgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatccataatcgagttagaagaggtag 298  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||  |||||||||||||    
T  7058743 accgtgaacctcatgaacactaaaccacataaaatcacataaacatcatctaccactctcgaattcatcaataaatccagaatcggtttagaagaggtag 7058644  T
Q  299 agggagagttcgtacagcctaccacaacaaaattcgaa-ccgatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaa 397  Q
    |||||||||||||||||| ||||||||||| |||| || | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  7058643 agggagagttcgtacagcataccacaacaagattcaaatcggatcggaacaacatttcaacacaacaacaaatccgaaccggatcggagaagaaaaccaa 7058544  T
Q  398 aacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||| ||||||| || |||||||||||||||||||    
T  7058543 aacacgaaacgaattcgtgaagaacaagaggtag 7058510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 99 - 431
Target Start/End: Complemental strand, 2750760 - 2750427
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||    
T  2750760 aaaaccattagatgtacttaatggtttccagcagttttccagccataaatccctctaacatcacaaagatttcgaatcaagtaaaaacttcagatctgaa 2750661  T
Q  199 accgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatccataatcgagttagaagaggtag 298  Q
    ||||||||| |||| |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  2750660 accgtgaacatcataaacactaaaccacataaaatcacataaacatcatctatcactctcgaattcatcaataaatccagaatcggtttagaagaggtag 2750561  T
Q  299 agggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaa 397  Q
    ||||||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2750560 agggagagttcatacaacctaccacaacaagattcgaaccggatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaa 2750461  T
Q  398 aacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    || | |||||||||| |||||||||| |||||||    
T  2750460 aatgtgaaacggatctgtgaagaacaggaggtag 2750427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 4836427 - 4836711
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4836427 agaaatttaaggcaatatttggaatcaacgcaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggtggtg 4836526  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgag 692  Q
    ||||||||||||||| | || |||||||||||||||||||||| ||||||||||||||||||||||||||||||    ||| ||||||||||||||||||    
T  4836527 ccaccaccggccaccacgccggaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgag 4836626  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    | |||||||||||||||||||||||||||||||||||||||||  ||  || ||||||||||||||||||||| |||||||||||    
T  4836627 ataaatgtttgaagcaaatgaagtttgatttggtgtagtttgaaaagcttaggattattacacgtgtacactagatctgatggtt 4836711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 4841872 - 4842156
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4841872 agaaatttaaggcaatatttggaatcaacgcaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggtggtg 4841971  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgag 692  Q
    ||||||||||||||| | || |||||||||||||||||||||| ||||||||||||||||||||||||||||||    ||| ||||||||||||||||||    
T  4841972 ccaccaccggccaccacgccggaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgag 4842071  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    | |||||||||||||||||||||||||||||||||||||||||  ||  || ||||||||||||||||||||| |||||||||||    
T  4842072 ataaatgtttgaagcaaatgaagtttgatttggtgtagtttgaaaagcttaggattattacacgtgtacactagatctgatggtt 4842156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 497 - 756
Target Start/End: Complemental strand, 2750364 - 2750101
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||     
T  2750364 agaaatctaaggcgatatttggaatcaacacaaaaaaggatgtctaaaaccatgaaaactttttgatttggacggagttttgaactccggcgcggtggtt 2750265  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga------gagtgctttatgttttagtg 690  Q
    ||||||||||||||||| |  ||||||  | |||||||||||| ||||||||||||||||||||||||||||||      ||| || |||||||||||||    
T  2750264 ccaccaccggccaccgcgctggaatca--acgtgtggccggaagagatgaagactcatctgaattgtagagagagtgagggagagcattatgttttagtg 2750167  T
Q  691 agagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacg 756  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  2750166 agagaaatgtttaaagtaaatgaagtttgatttggtgtagtttgagaagtctatgattattacacg 2750101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 497 - 777
Target Start/End: Complemental strand, 8550837 - 8550559
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttg-atttggacggagttttgaactccggcgcggttgt 595  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||   |||||  ||||||||||||||||||||||||||||||| ||    
T  8550837 agaaatctaaggtgatatttggaatcaacacaaaaaaagatgtctaaaaccgtgaattttttttttatttggacggagttttgaactccggcgcggtggt 8550738  T
Q  596 gccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtga 691  Q
     |||||||||       | |||||||||||||||||||||| || |||||||||||||||||||||||||||| |||| |    ||||||||||||||||    
T  8550737 accaccaccg-------cgccagaatcatcatgtgtggccgtaagagatgaagactcatctgaattgtagagaaagagggagaactttatgttttagtga 8550645  T
Q  692 gagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||  || ||||||||||||||||||||| |||||||||||    
T  8550644 gagaaatgtttgaagcaaatgaagtttgatttggtgtaatttgagaagcttatgattattacacgtgtacactagatctgatggtt 8550559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 497 - 777
Target Start/End: Complemental strand, 7058442 - 7058169
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    ||||| |||||||||||||||||||||||||||||||  ||    
T  7058442 agaaatctaaggcgatatttggaatcaacacaaaaaaggatgtctaaaatcgtgattttttttt-atttggacggagttttgaactccggcgcggtgatg 7058344  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgag 692  Q
    ||||           || |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |    |||||||||||||||||    
T  7058343 ccact----------gcgccagaatcatcatgtgtggccgaaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgag 7058254  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||    
T  7058253 agaagtgtttgaagcaaatgaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatcggatggtt 7058169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 497 - 689
Target Start/End: Original strand, 39658269 - 39658463
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  39658269 agaaatctaaggcgatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgattcggacggagttttgaactccggcgcggtggtg 39658368  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga--gagtgctttatgttttagt 689  Q
     ||||  ||||| |||  || |||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||| |||||||||||||||    
T  39658369 acaccggcggccgccgtgccggaatcatcatgtgtggccggaagagatgaagactcatttgaattgtagagagagggagagctttatgttttagt 39658463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 273 - 431
Target Start/End: Complemental strand, 8551062 - 8550903
Alignment:
Q  273 atccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaaccg-atcggaacaacacttcaacacaacaacaaatc 371  Q
    ||||| |||||  ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  8551062 atccagaatcggtttataagaggtagagggagagttcgtacaacctaccacaacaagattcgaaccggatcggaacaacacttcaacacaacaacaaatc 8550963  T
Q  372 cgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8550962 tgaaccggatcggagaagaagaccaaaacgcgaaacagatccgtgaagaacaagaggtag 8550903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 497 - 704
Target Start/End: Complemental strand, 1209039 - 1208829
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaa-aactttttgatttggacggagttttgaactccggcgcggttgt 595  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    ||||| ||||||||||||||||||||||| | || || ||    
T  1209039 agaaatctaaggcgatatttggaatcaacacaaaaaaggatgtctaaaaccatgaattttttttttatttggacggagttttgaactccagagcagtggt 1208940  T
Q  596 gccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga--gagtgctttatgttttagtgaga 693  Q
    ||||||  ||||| |||  |  ||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  1208939 gccaccggcggccgccgtgctggaatcatcatgtgtggccgcaagagatgaagactcatctgaattgtagagagagggagagctttatgttttagtgaga 1208840  T
Q  694 gaaatgtttga 704  Q
    |||||||||||    
T  1208839 gaaatgtttga 1208829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 286 - 431
Target Start/End: Complemental strand, 1209259 - 1209110
Alignment:
Q  286 ttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaaccg-atcggaacaacacttcaacacaacaacaa---atccgaaccggat 381  Q
    |||||||||||| | ||||||||||||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||||   |||||||| ||||    
T  1209259 ttagaagaggtacaaggagagttcgtacagactaccacaacaagattcgaaccggatcggaacaacatttcaacacaacaacaacaaatccgaactggat 1209160  T
Q  382 cggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  1209159 cagagaagaagaccaaaacgcgaaacggatccatgaagaacaagaggtag 1209110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 658 - 777
Target Start/End: Original strand, 32987334 - 32987455
Alignment:
Q  658 aattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 755  Q
    ||||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  32987334 aattgtagagagagggagagctttatgttttagttagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacac 32987433  T
Q  756 gtgtacactaaatctgatggtt 777  Q
    |||||||||| |||||||||||    
T  32987434 gtgtacactagatctgatggtt 32987455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 7614608 - 7614500
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| ||||||| |||||||||||||||||||    
T  7614608 aaaaccattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacattacaaaaatttcgaatccaataacaacttcagatctgaa 7614509  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  7614508 accgtgaac 7614500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 664 - 774
Target Start/End: Complemental strand, 39022143 - 39022033
Alignment:
Q  664 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 763  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||||    
T  39022143 agagagggagagctttatgttttagtgagataaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacatgtacac 39022044  T
Q  764 taaatctgatg 774  Q
    || ||||||||    
T  39022043 tagatctgatg 39022033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 39022633 - 39022525
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||||    
T  39022633 aaaaccattagatgtacttaatggttttcagtagttttccagccataaatccatctaacatcacaaagatttcgaatccagtaacaacttcatatctgaa 39022534  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  39022533 accgtgaac 39022525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 1209445 - 1209352
Alignment:
Q  187 ttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatccataa 280  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  1209445 ttcagatctaaaactgtgaacctcatgaacactaaaccatagaaaatcacataaacatcatctaccactctcgaattcatcaaaaaatccataa 1209352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 664 - 777
Target Start/End: Original strand, 15260748 - 15260861
Alignment:
Q  664 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 763  Q
    |||||| ||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||  |||||||| ||||||||||    
T  15260748 agagagggagagttttatattttagtgagagaaatatttgaagcaaatgaagtttgatttggtgtagtttgagaagccttggattattaaacgtgtacac 15260847  T
Q  764 taaatctgatggtt 777  Q
    || || ||||||||    
T  15260848 tagatttgatggtt 15260861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 693 - 777
Target Start/End: Complemental strand, 7614207 - 7614123
Alignment:
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| || |||||||||||    
T  7614207 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctatgattattacacgtgtacattagatctgatggtt 7614123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 1209518 - 1209443
Alignment:
Q  61 catcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttc 136  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  1209518 catcaccgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggttttcagcagtttc 1209443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 8551177 - 8551103
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcag 132  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  8551177 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaaaccattagatgtacttaatgattttcagcag 8551103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 15260266 - 15260367
Alignment:
Q  106 ttagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaaaccgtga 205  Q
    ||||||||||||| |||||||||| |||||| |||| ||||| ||||| ||||||| |||||||| ||||  |||||||||||||||| |||||||||||    
T  15260266 ttagatgtacttagtggtttccagtagtttctcagctataaacccctccaacatcacaaagatttcgaatatagtaacaacttcagatatgaaaccgtga 15260365  T
Q  206 ac 207  Q
    ||    
T  15260366 ac 15260367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 7058927 - 7058851
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||| |||||    
T  7058927 catcatcaccgtaccggaatgccaaaaccattttcctgtggaaaaccattagatgtacttaatggtttccaacagtt 7058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 2750844 - 2750768
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  2750844 catcatcacagtaccggaatgtcaaaaccattttgatgtggaaaaccattagatgtacttaatggtttgcagcagtt 2750768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 717 - 774
Target Start/End: Complemental strand, 15181906 - 15181849
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 774  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||| ||||||||    
T  15181906 ttgatttggtgtagtttgagaaacctaagattattacacgtgtacactagatctgatg 15181849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 569 - 613
Target Start/End: Complemental strand, 4838769 - 4838725
Alignment:
Q  569 cggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  4838769 cggagttttgaactccggcgcggtggtgccaccaccggccaccgc 4838725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 32986924 - 32986968
Alignment:
Q  163 aaagattttgaatccagtaacaacttcagatctgaaaccgtgaac 207  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  32986924 aaagatttcgaatccagtaacaacttcagatctgaaaccgtgaac 32986968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 613
Target Start/End: Complemental strand, 36578020 - 36577978
Alignment:
Q  571 gagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  36578020 gagttttgaactccggcgcggtggtgccaccaccggccaccgc 36577978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 2751108 - 2751065
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  2751108 catcatcaccgtaccggaatgctaaaaccattttgctgtggaaa 2751065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 613
Target Start/End: Complemental strand, 26872707 - 26872669
Alignment:
Q  575 tttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  26872707 tttgaactccggcgcggtggtgccaccaccggccaccgc 26872669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 613
Target Start/End: Complemental strand, 26875165 - 26875127
Alignment:
Q  575 tttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  26875165 tttgaactccggcgcggtggtgccaccaccggccaccgc 26875127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 618 - 656
Target Start/End: Complemental strand, 39022224 - 39022186
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatct 656  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  39022224 gaatcatcatgtgtggccggaagagatgaagactcatct 39022186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 658
Target Start/End: Original strand, 15260666 - 15260707
Alignment:
Q  617 agaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  15260666 agaatcatcatatgtggccggaagagatgaagactcatctga 15260707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 1209649 - 1209609
Alignment:
Q  61 catcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  1209649 catcaccgtaccggaatgccaaaaccattttgctgtggaaa 1209609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 23504565 - 23504597
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  23504565 aaaatcattagatgtacttaatggtttccagca 23504597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 2750932 - 2750889
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||    
T  2750932 catcatcacagtaccggaatgaaaaaaccattttgctgtggaaa 2750889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 2751020 - 2750977
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||    
T  2751020 catcatcacagtaccggaatgaaaaaaccattttgctgtggaaa 2750977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Original strand, 23091553 - 23091596
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  23091553 ggagtttaaaactccggcgcggtggtgccaccaccggccaccgc 23091596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 23397232 - 23397199
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  23397232 aaaaccattagatgtacttaatggtttccagcag 23397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 99 - 431
Target Start/End: Original strand, 15974265 - 15974598
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||||||||||||||    
T  15974265 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccatctaacatcacaaagatttcaaatccagtaacaacttcagatctgaa 15974364  T
Q  199 accgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatccataatcgagttagaagaggtag 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||  |||||||||||||    
T  15974365 accgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcgaattcatcaataaatccagaatcggtttagaagaggtag 15974464  T
Q  299 agggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaa 397  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15974465 agggagagttcgtacagcctaccacaacaagattcgaaccagatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaa 15974564  T
Q  398 aacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||| ||||||||||||||||||||||||    
T  15974565 aacgcgaaatggatccgtgaagaacaagaggtag 15974598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 15974663 - 15974946
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||   ||||| ||||||||||||||||||||||||||||||| |||    
T  15974663 agaaatctaaggcgatatttggaatcaacacaaaaaaggatgtctaaaaccgt-aatttttttttatttggacggagttttgaactccggcgcggtggtg 15974761  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgt----agagagagagtgctttatgttttagtgag 692  Q
    ||||||||||||||||| || |||||||||||||||  ||||| |||||||||||||||||| ||||    |||| ||||| ||||||||||||||||||    
T  15974762 ccaccaccggccaccgcgccggaatcatcatgtgtgatcggaagagatgaagactcatctgacttgtacagagagggagagagctttatgttttagtgag 15974861  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||| |||||||||||||||||||| |||||  || |||||||||||||| ||||||||||||| ||||||||    
T  15974862 agaaatgtttgaagcagatgaagtttgatttggtgtactttgataagcctaagattattacatgtgtacactaaatatgatggtt 15974946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 497 - 704
Target Start/End: Complemental strand, 48305565 - 48305356
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||| | |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  48305565 agaaatctaagacgatatttggaatcaacacaaaa--ggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggtggtg 48305468  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgag 692  Q
    |||||  ||||| |||  || ||||||||||||||||||||||  |||||||||||||||||||||||||||||    ||| ||||||||||||| ||||    
T  48305467 ccaccgacggccgccgtgccggaatcatcatgtgtggccggaagtgatgaagactcatctgaattgtagagagagagggagagctttatgttttattgag 48305368  T
Q  693 agaaatgtttga 704  Q
    ||||||||||||    
T  48305367 agaaatgtttga 48305356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 285 - 431
Target Start/End: Complemental strand, 48305776 - 48305629
Alignment:
Q  285 gttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaaccg-atcggaacaacacttcaacacaacaacaaatccgaaccggatcg 383  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  48305776 gttagaagaggtagagggagagttcgtacagcctaccacaacaagattcgaaccggatcggaacaacacttcaacacaacaacaaatccgaaccggatca 48305677  T
Q  384 gagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48305676 gagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 48305629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 497 - 704
Target Start/End: Complemental strand, 48691323 - 48691112
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  | ||||| |||    
T  48691323 agaaatctaaggcgatatttgaaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttgaacggagttttgaaatctagtgcggtggtg 48691224  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgag 692  Q
    |||||  ||||| |||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||    ||| ||||||||||||||||||    
T  48691223 ccaccggcggccgccgtgccggaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgag 48691124  T
Q  693 agaaatgtttga 704  Q
    |||||| |||||    
T  48691123 agaaatttttga 48691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 619 - 777
Target Start/End: Original strand, 46573348 - 46573510
Alignment:
Q  619 aatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaa 714  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||||| |    |||||||||||||||||||||||||||||||||||||||    
T  46573348 aatcatcatgtgtgccctgaagagatgaagactcatctgaattgtagatagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaa 46573447  T
Q  715 gtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||    
T  46573448 gtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggtt 46573510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 307 - 431
Target Start/End: Complemental strand, 48691513 - 48691388
Alignment:
Q  307 ttcgtacagcctaccacaacaaaattcgaaccg-atcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaa 405  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48691513 ttcgtacagcctacaacaacaagattcgaaccggatcggaacaacacttcaacacaacaacaaatccgaaccgaatcggagaagaagaccaaaacgcgaa 48691414  T
Q  406 acggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||||||||    
T  48691413 acggatccgtgaagaacaagaggtag 48691388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 30430374 - 30430266
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  30430374 aaaatcattagatgtacttaatggtttccaacagtttcccaaccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagctctgaa 30430275  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  30430274 accgtgaac 30430266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 48305960 - 48305867
Alignment:
Q  187 ttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatccataa 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  48305960 ttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcgaattcatcaaaaaatccataa 48305867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 675 - 777
Target Start/End: Complemental strand, 30429030 - 30428928
Alignment:
Q  675 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 774  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||    
T  30429030 gctttatgttttagtgagataaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatg 30428931  T
Q  775 gtt 777  Q
    |||    
T  30428930 gtt 30428928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 33798467 - 33798359
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  33798467 aaaaccattagatatacttaatggtttccagcagttttccagccataaatctctctaacatcacaaaaatttcgaatccagtaacaacttcagatctgaa 33798368  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  33798367 accgtgaac 33798359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 46024693 - 46024586
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  46024693 aaaaccattagatgtacttaatggtttccgggagtttcc-agccataaatccctctaacatcacaaagattttgaatccagtaacaacttcagatctaaa 46024595  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  46024594 accgtgaac 46024586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 564 - 704
Target Start/End: Complemental strand, 28396986 - 28396842
Alignment:
Q  564 ttggacggagttttgaactccggcgcggttgtgccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgt 663  Q
    |||||||| |||||||||||||||||||| ||||||||  ||||| |||  || |||||||||||||||||||||| ||||||||||||||||||||||     
T  28396986 ttggacggggttttgaactccggcgcggtggtgccaccggcggccgccgtgccggaatcatcatgtgtggccggaagagatgaagactcatctgaattgc 28396887  T
Q  664 agagagagagtg----ctttatgttttagtgagagaaatgtttga 704  Q
    |||||||||| |    |||||||||||| ||||||||||||||||    
T  28396886 agagagagagggagaactttatgttttattgagagaaatgtttga 28396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 676 - 777
Target Start/End: Complemental strand, 46024183 - 46024082
Alignment:
Q  676 ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatgg 775  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  46024183 ctttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttaatgtagtttgagaagtctaggattattacacgtgtacactatatctgatgg 46024084  T
Q  776 tt 777  Q
    ||    
T  46024083 tt 46024082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 46572980 - 46573080
Alignment:
Q  106 ttagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaaaccgtga 205  Q
    |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  46572980 ttagatgtacttaatgatctccagcagtttcctagccataaatccctctaacatcacaaagattttgaat-cagtaacaacttcagatctgaaaccgtga 46573078  T
Q  206 ac 207  Q
    ||    
T  46573079 ac 46573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 48691651 - 48691561
Alignment:
Q  187 ttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatcca 277  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  48691651 ttcagatctgaaatcgtgagcctcatgaacactaaaccacagaaaatcacataaacattatctaccactctcgaattcatcaataaatcca 48691561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 693 - 777
Target Start/End: Complemental strand, 33798070 - 33797986
Alignment:
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||| |||||||||||    
T  33798070 agaaatgtttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtatactagatctgatggtt 33797986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 15974181 - 15974257
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  15974181 catcatcaccgtaccggaatgccaaaaccattttgccgtggaaaaccattagatgtacttaatggtttccagcagtt 15974257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 46572891 - 46572965
Alignment:
Q  60 tcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  46572891 tcatcaccgtactggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcagtt 46572965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 48691770 - 48691700
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttcca 128  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  48691770 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttcca 48691700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 48306079 - 48306003
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||| | ||||||||||||||||||||||| |||||    
T  48306079 catcatcaccgtaccagaatgccaaaaccattttgctgtggaaaaccgttagatgtacttaatggtttccaacagtt 48306003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 5757502 - 5757442
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  5757502 ttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatggtt 5757442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 46572764 - 46572807
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  46572764 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaa 46572807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 32090693 - 32090633
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||| || ||| |||||||||||||||| |||| || ||||||||    
T  32090693 ttgatttggtgtagtttgagaagcctatgattattacacgtgtatactagatttgatggtt 32090633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 15974050 - 15974093
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  15974050 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaa 15974093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 559935 - 559892
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  559935 ggagtttgaaactccggcgcggtggtgccaccaccggccaccgc 559892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 569844 - 569801
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  569844 ggagtttgaaactccggcgcggtggtgccaccaccggccaccgc 569801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Original strand, 4185175 - 4185218
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  4185175 ggagtttcgaactccggcgcggtggtgccaccgccggccaccgc 4185218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 613
Target Start/End: Complemental strand, 5200651 - 5200608
Alignment:
Q  571 gagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  5200651 gagttttgaaactccggcgcggtggtgccaccaccggccaccgc 5200608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 613
Target Start/End: Complemental strand, 5209780 - 5209737
Alignment:
Q  571 gagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  5209780 gagttttgaaactccggcgcggtggtgccaccaccggccaccgc 5209737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 17515842 - 17515799
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  17515842 ggagtttgaaactccggcgcggtggtgccaccaccggccaccgc 17515799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Original strand, 17537372 - 17537415
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  17537372 ggagtttgaaactccggcgcggtggtgccaccaccggccaccgc 17537415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 613
Target Start/End: Complemental strand, 27967438 - 27967395
Alignment:
Q  571 gagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  27967438 gagttttgaaactccggcgcggtggtgccaccaccggccaccgc 27967395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 613
Target Start/End: Complemental strand, 27976891 - 27976848
Alignment:
Q  571 gagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  27976891 gagttttgaaactccggcgcggtggtgccaccaccggccaccgc 27976848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 33798510 - 33798475
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||| |||||||||||||||||||||||||||||||    
T  33798510 aaaaccattagatgtacttaatggtttccagcagtt 33798475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 658
Target Start/End: Complemental strand, 46024287 - 46024236
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    ||||||| || |||||||||||||||| ||||| ||||||||||| ||||||    
T  46024287 ccaccgcgccggaatcatcatgtgtggtcggaagagatgaagactaatctga 46024236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 48691904 - 48691861
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||  |||||||||||| ||||||||    
T  48691904 catcatcaccgtaccggaatgtcaaaaccattttgctgtggaaa 48691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 613
Target Start/End: Original strand, 38411786 - 38411820
Alignment:
Q  579 aactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||| ||||||||||||||||||||    
T  38411786 aactccggcgcggtggtgccaccaccggccaccgc 38411820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 24360554 - 24360521
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  24360554 aaaaccattagatgtacttaatggtttccagcag 24360521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 32091320 - 32091287
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  32091320 aaaaccattagatgtacttaatggtttccagcag 32091287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 46024826 - 46024793
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  46024826 aaaaccattagatgtacttaatggtttccagcag 46024793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 48305995 - 48305958
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttc 136  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  48305995 aaaaccattagatatacttaatggtttccagcagtttc 48305958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 230; Significance: 1e-126; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 58 - 431
Target Start/End: Complemental strand, 877975 - 877606
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    ||||||||||||| | |||||| ||||||||| |  ||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  877975 catcatcaccgtatcagaatgccaaaaccattatactgtggaaaaccattacatgtactaaatggtttccagcagtttcccagccataaatccctctaac 877876  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  877875 atcacaaagatttcgaatccagtaacaacttcaaatctgaaactgtgaacctcatgaacactaaaccatagaaaatcacataaacatcatctaccactct 877776  T
Q  258 caaattcatcaataaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttca 356  Q
    | |||||   |||||| ||  |||||  |||||||||||||||||||||| |||||| ||||||||||||| ||| ||||| |||| |||||||| ||||    
T  877775 cgaattc--gaataaacccgaaatcggtttagaagaggtagagggagagtgcgtacaacctaccacaacaagatttgaaccggatcagaacaacaattca 877678  T
Q  357 acacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||    
T  877677 acacaacaacaaatccgaaccggatcgg---agaagaccgaaacgcgaaacggatccgtgaagaacaagaggtag 877606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 58 - 431
Target Start/End: Original strand, 33345651 - 33346031
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| ||||||||||| ||||    
T  33345651 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaaaccattagatgtacttaatggtttccggcagtttgccagtcataaatccctttaac 33345750  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| |||||||| ||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33345751 atcacaaagatttcgaatttagtaacaaattcagatctgaaaccgtaaacctcatgaacactaaaccacagaaaatcacataaacatcatttaccactct 33345850  T
Q  258 caaattcatcaat------------aaatccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaacc-gatcgg 344  Q
    |||| ||||||||            | ||||| |||||  ||||||||| ||||||||||||||  ||     || ||||||| ||||||||| ||||||    
T  33345851 caaagtcatcaatgaatccagaagaacatccagaatcggtttagaagagatagagggagagttc-aac-----acaacaacaagattcgaaccggatcgg 33345944  T
Q  345 aacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33345945 aacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 33346031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 24737416 - 24737701
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  24737416 agaaatctaaggagatattttgaatcaacacaaaaaaggatgtctaaaaccgtgaaaactatttgatttggacggagttttgaactccggcgcggtggtg 24737515  T
Q  597 ccaccac---cggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga--gagtgctttatgttttagtga 691  Q
    |||||||   || ||||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  24737516 ccaccaccagcgaccaccgtgccggaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagagagggagagttttatgttttagtga 24737615  T
Q  692 gagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||||||||| |||||||||||    
T  24737616 gagaaatgtttgaagcaaatgaagtttgatttggtgtagtttaagaagcctaggattattacacgtgtacactagatctgatggtt 24737701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 58 - 280
Target Start/End: Original strand, 24736891 - 24737112
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    ||||||||||||||  |||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  24736891 catcatcaccgtactagaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcagttttcccgccataaattcctctaac 24736990  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  24736991 atcacaaagatttcgaatcca-taacaacttcagatctgaaaccgtgaacctcatgaacactaaaccgcataaaatcacataaacatcatctaccactct 24737089  T
Q  258 caaattcatcaataaatccataa 280  Q
    | |||||||||||||||||||||    
T  24737090 cgaattcatcaataaatccataa 24737112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 499 - 763
Target Start/End: Complemental strand, 877540 - 877277
Alignment:
Q  499 aaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtgcc 598  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  877540 aaatttaaggcgatatttggaatcaacacaaaaaatgatgtctaaaattgtgaaaactttttgatttggacggagttttgaactccgacgcggtggtgcc 877441  T
Q  599 accaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga--gagtgctttatgttttagtgagagaa 696  Q
    |||| |||||||| | || |||||||||||||||||| ||| |||||||||||| |   |||||||||||||  ||| ||||| ||||||||||||||||    
T  877440 accatcggccaccacgccggaatcatcatgtgtggcctgaagagatgaagactcct---aattgtagagagagggagagctttttgttttagtgagagaa 877344  T
Q  697 atgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 763  Q
    |||||||||||||||||||||||||||||||||||||||| ||  || |||||||| ||||||||||    
T  877343 atgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcttatgattattatacgtgtacac 877277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 33346098 - 33346381
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||    ||||| |||||||| |||||||||||||  ||||||| |||    
T  33346098 agaaatctaaggcgatatttggaatcgacacaaaaaaggatgtctaaacccgtgattttttttt-atttggacagagttttgaactctagcgcggtggtg 33346196  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgag 692  Q
    |||| | |||||||| | || ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |    |||||||||||||||||    
T  33346197 ccactatcggccaccacgccggaatcatcatgtgtggccgaaagagatgaagactcatctgaattgtagagagagagggagaactttatgttttagtgag 33346296  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||| |||||||||||||  |||||||||| || |||  |||||||||||||||||||| || ||||||||    
T  33346297 agaaatgtttgaagcaaacgaagtttgatttgacgtagtttgagaagcctataattattacacgtgtacactagatttgatggtt 33346381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 273 - 431
Target Start/End: Original strand, 24737192 - 24737351
Alignment:
Q  273 atccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaaccg-atcggaacaacacttcaacacaacaacaaatc 371  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  24737192 atccagaatcggtttagaagaggtagagggagagttcgtacagcctaccacaacaagattcgaaccggatcggaacaacacttcaacacaacaacaaatc 24737291  T
Q  372 cgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  24737292 cgaaccggatcggagaagaagaccaaaacgtgaaacggagccgtgaagaacaagaggtag 24737351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 18611304 - 18611244
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||| ||||||| || ||| ||||||||||||||||||||| |||||||||||    
T  18611304 ttgatttggtgtggtttgagaagcctatgattattacacgtgtacactagatctgatggtt 18611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 29157341 - 29157281
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||| || |||  |||||||||||||||||||| |||||||||||    
T  29157341 ttgatttggtgtagtttgagaagcctagtattattacacgtgtacactagatctgatggtt 29157281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 613
Target Start/End: Original strand, 3042352 - 3042435
Alignment:
Q  529 aaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||| ||||| ||| |||| ||||||| | ||| |||||||  |||||||||||||| | ||||||||||||||||||    
T  3042352 aaaaaggatgtttaaaaacgtaaaaagtttttgaatcgga-ggagtttaaaactccggcgcggtggcgccaccaccggccaccgc 3042435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 878106 - 878063
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    ||||||||| |||||||||||| |||||||||||||||||||||    
T  878106 catcatcactgtaccggaatgccaaaaccattttgttgtggaaa 878063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 576 - 612
Target Start/End: Original strand, 5995689 - 5995725
Alignment:
Q  576 ttgaactccggcgcggttgtgccaccaccggccaccg 612  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5995689 ttgaactccggcgcggtggtgccaccaccggccaccg 5995725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 14237850 - 14237882
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  14237850 aaaatcattagatgtacttaatggtttccagca 14237882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 613
Target Start/End: Original strand, 20215976 - 20216059
Alignment:
Q  529 aaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||| |||||  || |||| ||||||| | ||| | |||||||| |||||||||||| |||||||| |||||||||||    
T  20215976 aaaaaggatgtttaaaaatgtaaaaagtttttgaatcgga-gaagttttgagctccggcgcggtggtgccaccgccggccaccgc 20216059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 613
Target Start/End: Original strand, 22109997 - 22110080
Alignment:
Q  529 aaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||| |||||  || |||| ||||||| | ||| | |||||||| |||||||||||| |||||||| |||||||||||    
T  22109997 aaaaaggatgtttaaaaatgtaaaaagtttttgaatcgga-gaagttttgagctccggcgcggtggtgccaccgccggccaccgc 22110080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 613
Target Start/End: Original strand, 24919128 - 24919211
Alignment:
Q  529 aaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||| |||||  || |||| ||||||| | ||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  24919128 aaaaaggatgtttaaaaatgtaaaaagtttttgaatcgga-ggagtttcgaactccggcgcggtggtgccactgccggccaccgc 24919211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 878249 - 878210
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtg 97  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  878249 catcatcaccgtaccggaatgtcaaaaccattttgttgtg 878210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 24296481 - 24296438
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||    
T  24296481 ggagttttgaactccggcgtggtggtgccaccgccggccaccgc 24296438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 24310512 - 24310469
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||    
T  24310512 ggagttttgaactccggcgtggtggtgccaccgccggccaccgc 24310469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 24736760 - 24736803
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||    
T  24736760 catcttcaccgtactggaatgccaaaaccattttgttgtggaaa 24736803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 27048727 - 27048684
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  27048727 ggagtttgaaactccggcgcggtggtgccaccaccggccaccgc 27048684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 27058971 - 27058928
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  27058971 ggagtttgaaactccggcgcggtggtgccaccaccggccaccgc 27058928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 613
Target Start/End: Complemental strand, 30997001 - 30996958
Alignment:
Q  571 gagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  30997001 gagttttgaaactccggcgcggtggtgccaccaccggccaccgc 30996958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 18611953 - 18611920
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  18611953 aaaaccattagatgtacttaatggtttccagcag 18611920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 30909379 - 30909346
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  30909379 aaaaccattagatgtacttaatggtttccagcag 30909346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 497 - 777
Target Start/End: Complemental strand, 638190 - 637909
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  638190 agaaatctaaggcgatatttggaatcaacacaaaaa-ggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggtggtg 638092  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga--gagtgctttatgttttagtgagag 694  Q
    ||||||||||||||||   | |||||||| ||||||||||||| |||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||    
T  638091 ccaccaccggccaccgtgtcggaatcatcgtgtgtggccggaagagatgaagactcatctaaattgtagagagagggagagctttatgttttagtgagag 637992  T
Q  695 aaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||| ||||||||| |||||||||||    
T  637991 aaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaaaattattacacatgtacactagatctgatggtt 637909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 497 - 777
Target Start/End: Original strand, 26447138 - 26447422
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  26447138 agaaatctaaggcgatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcacggtggtg 26447237  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgag 692  Q
    |||||| |||||||||| |  |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |    |||||||||||||||||    
T  26447238 ccaccatcggccaccgcgctggaatcatcatgtgtggccggaagagatgaggactcatctgaattgtatagagagagggagaactttatgttttagtgag 26447337  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||| |||||||||||||| |||| | || |||  |||||||||||||||||||| |||||||||||    
T  26447338 agaaatgtttgaagcaaatgaaatttgatttggtgtaatttgtgaagcctagaattattacacgtgtacactagatctgatggtt 26447422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 58 - 280
Target Start/End: Complemental strand, 638717 - 638495
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  638717 catcatcaccgtaccggaatgccaaaaccattttgatgtggaaaaccattagatgtacttaatggtttccaactgtttcccagccataaatccctctaac 638618  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactct 257  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  638617 atcacaaagattttgaatccagtaacaactttagatctgaaaccgtgaacctcatgaacacgaaacgacagaaaatcacataaacatcatctaccactct 638518  T
Q  258 caaattcatcaataaatccataa 280  Q
    | |||||||||||||||||||||    
T  638517 cgaattcatcaataaatccataa 638495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 273 - 431
Target Start/End: Complemental strand, 638415 - 638256
Alignment:
Q  273 atccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaaccg-atcggaacaacacttcaacacaacaacaaatc 371  Q
    ||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||    
T  638415 atccagaatcggtttagaagaggtagagggagagttcgtacaacctaccacaacaagattcaaaccggatcggaataacacttcaacacaacaacaaatc 638316  T
Q  372 cgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  638315 tgaaccggatcggagaagaagaccaaaacgcgaaacggatccatgaagaacaagaggtag 638256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 286 - 431
Target Start/End: Original strand, 26446927 - 26447073
Alignment:
Q  286 ttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaaccg-atcggaacaacacttcaacacaacaacaaatccgaaccggatcgg 384  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||    
T  26446927 ttagaagaggtggagggagagttcgtacagcctaccacaacaagattcgaaccggatcagaacaacacttaaccacaacaacaaatccgaaccggatcgg 26447026  T
Q  385 agaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  26447027 agaagaagaccaaaacgcgaaacgaatccgtgaagaacaagaggtag 26447073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 618 - 777
Target Start/End: Original strand, 51836937 - 51837101
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaa-tg 712  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||| ||| ||    
T  51836937 gaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagtaaaatg 51837036  T
Q  713 aagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||    
T  51837037 aagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacattaaatctgatggtt 51837101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 607 - 773
Target Start/End: Complemental strand, 45256206 - 45256034
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtg------ctttatgttttagtgagagaaatgt 700  Q
    ||||||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |      |||||||||||||||||||||||||    
T  45256206 ccaccgcgccggaatcatcctgtgtggccggaagagatgaagactcatctgaattgtagagagagagggggggagctttatgttttagtgagagaaatgt 45256107  T
Q  701 ttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgat 773  Q
    |||||||||||||||||||||||| ||||||||||  || ||| ||||||||||||||||||||| |||||||    
T  45256106 ttgaagcaaatgaagtttgatttgatgtagtttgaaaagcctaggattattacacgtgtacactatatctgat 45256034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 45256614 - 45256465
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    ||||||||||| |||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45256614 catcatcaccggaccggaatgccaaaaccattttgctgtgcaaaacctttagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 45256515  T
Q  158 atcataaagattttgaatccagtaacaacttcagatctgaaaccgtgaac 207  Q
    |||| ||||||||  ||||||| |||||||||| ||||||||||||||||    
T  45256514 atcacaaagatttcaaatccagaaacaacttcatatctgaaaccgtgaac 45256465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 18923920 - 18923812
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  18923920 aaaatcattagatgtacttaatgatttctagcagtttcccagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 18923821  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  18923820 accgtgaac 18923812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 26577579 - 26577672
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccc 151  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26577579 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccc 26577672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 4169019 - 4168911
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  4169019 aaaaccattagatgtacttaatggtttccagcagtttctcagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttaagatctgaa 4168920  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  4168919 accgtgaac 4168911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 51836592 - 51836700
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||    
T  51836592 aaaaccattagatgtacttaatggtttccaacaatttcccagccataaatccctctaatatcacaaagatttcgaatccagtaacaacttcagatctgaa 51836691  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  51836692 accgtgaac 51836700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 675 - 777
Target Start/End: Original strand, 22181153 - 22181255
Alignment:
Q  675 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 774  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||||||    
T  22181153 gctttatgttttagtgagagaaatgtttgaggcaaatgaagtttgatttggtgtagtttgagaaacctaggattattacacgtgtacactaaatctgatg 22181252  T
Q  775 gtt 777  Q
    |||    
T  22181253 gtt 22181255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 22180649 - 22180755
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||    
T  22180649 aaaaccattagatgtacttaatggtttccagtagtttcccagccataaatccct--aacatcacaaagatttcgaatccagtaacaacttcagatctgaa 22180746  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  22180747 accgtgaac 22180755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 27764906 - 27764805
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  27764906 aaaaccattagatgtacttaatggtttccaacagttttccagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 27764807  T
Q  199 ac 200  Q
    ||    
T  27764806 ac 27764805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 675 - 777
Target Start/End: Complemental strand, 4168515 - 4168413
Alignment:
Q  675 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 774  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||| |||||||||| |||||||||| ||||||||    
T  4168515 gctttatgttttagtgagagaaatgtttgaaacaaatgaagtttgatttggtgtagtttgagaaacctaggattattacatgtgtacactagatctgatg 4168416  T
Q  775 gtt 777  Q
    |||    
T  4168415 gtt 4168413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 36621232 - 36621334
Alignment:
Q  105 attagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaaaccgtg 204  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||| |||| |||||||||||||    
T  36621232 attagatgtacttaatggtttccatcagtttcccaaccataaatccctctaacatcacaaagatttcaaatccagtaacaaattcatatctgaaaccgtg 36621331  T
Q  205 aac 207  Q
    |||    
T  36621332 aac 36621334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 676 - 777
Target Start/End: Complemental strand, 27764396 - 27764295
Alignment:
Q  676 ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatgg 775  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||  || ||||||||||||||||||||| |||||||||    
T  27764396 ctttatgttttagtgagagaaatgtttgaagcaaataaggtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatctgatgg 27764297  T
Q  776 tt 777  Q
    ||    
T  27764296 tt 27764295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 21097776 - 21097668
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||||||||||||||||||    
T  21097776 aaaaccattagatatacttaatgatttccagcagtttcccagccataaatctctctaacatcacaaaaatttcaaatccagtaacaacttcagatctgaa 21097677  T
Q  199 accgtgaac 207  Q
    || ||||||    
T  21097676 actgtgaac 21097668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 683 - 777
Target Start/End: Original strand, 38485590 - 38485684
Alignment:
Q  683 ttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |||||| || ||| |||||||||||||||||| || |||||||||||    
T  38485590 ttttagtgagagaaatgtttgaagcaaatgaagtttgatttaatgtattttgagaagcctaggattattacacgtgtacattagatctgatggtt 38485684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 664 - 777
Target Start/End: Complemental strand, 21097308 - 21097195
Alignment:
Q  664 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 763  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  ||  ||  ||||||||||||||| ||    
T  21097308 agagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtaatttaataagcttagaattattacacgtgtaaac 21097209  T
Q  764 taaatctgatggtt 777  Q
    || |||| ||||||    
T  21097208 tagatctaatggtt 21097195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 10473226 - 10473159
Alignment:
Q  67 cgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10473226 cgtaccggaatgccaaaaccattttgttgtggaaaaccattagatgtacttaatggtttccagcagtt 10473159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 693 - 777
Target Start/End: Original strand, 36621627 - 36621711
Alignment:
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||  || |||||||||||||||||| || |||||||||||    
T  36621627 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttaagaagcataggattattacacgtgtacattagatctgatggtt 36621711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 26446800 - 26446875
Alignment:
Q  59 atcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||||||||| |||||    
T  26446800 atcatcaccgtaccggaatgccaaaaccattttgatatggaaaaccattagatgtacttaatggtttccaacagtt 26446875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 677 - 736
Target Start/End: Complemental strand, 18923414 - 18923355
Alignment:
Q  677 tttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgag 736  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  18923414 tttatgttttagtgacagaaatatttgaagcaaatgaagtttgatttggtgtagtttgag 18923355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 51836510 - 51836573
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatg 121  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  51836510 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatg 51836573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 38245631 - 38245558
Alignment:
Q  61 catcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||||||||||||| ||||||||||||  |||||||| |||||||| ||||||||||||||| ||||||    
T  38245631 catcaccgtaccggaatgccaaaaccattttgccgtggaaaaccattagatctacttaatggtttccggcagtt 38245558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 661
Target Start/End: Complemental strand, 27764494 - 27764451
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctgaatt 661  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  27764494 gaatcatcatgtgtggccggaagagatgaagactcatctgaatt 27764451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 658
Target Start/End: Complemental strand, 21097399 - 21097349
Alignment:
Q  608 caccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||||||    
T  21097399 caccgcgccggaatcatcatgtgtggccggaagagatgaagactcatctga 21097349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 658
Target Start/End: Complemental strand, 4168607 - 4168567
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  4168607 gaatcatcatgtgtggccggaagagatgaagactcatctga 4168567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 50563679 - 50563739
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||| |  |||  |||||||||||||||||||| |||||||||||    
T  50563679 ttgatttggtgtagtttgagaaacctataattattacacgtgtacactagatctgatggtt 50563739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 613
Target Start/End: Original strand, 52296728 - 52296772
Alignment:
Q  569 cggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  52296728 cggagttttgaactccggcgcagtggtgccaccaccggccaccgc 52296772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 10473502 - 10473459
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  10473502 catcatcaccgtaccggaatgccaaaactattttgttgtggaaa 10473459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 654
Target Start/End: Original strand, 22181051 - 22181098
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcat 654  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  22181051 ccaccgcgccagaatcatcatgtgtggccggaagagatgaaaactcat 22181098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 613
Target Start/End: Original strand, 12997531 - 12997569
Alignment:
Q  575 tttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  12997531 tttgaactccggcgcggtggtgccaccaccggccaccgc 12997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 27765055 - 27765022
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    ||||||||||||||||||||||||||||||||||    
T  27765055 aaaatcattagatgtacttaatggtttccagcag 27765022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 4749098 - 4749054
Alignment:
Q  570 ggagttttg-aactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||    
T  4749098 ggagttttggaactccggcgcggtggtgccaccaccggccaccgc 4749054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 8157182 - 8157214
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  8157182 aaaatcattagatgtacttaatggtttccagca 8157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 618 - 658
Target Start/End: Complemental strand, 18923506 - 18923466
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  18923506 gaatcatcatgtgtggtcggaagagatgaagactcatctga 18923466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 573 - 613
Target Start/End: Original strand, 32215923 - 32215963
Alignment:
Q  573 gttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  32215923 gtttcgaactccggcgcggtggtgccaccaccggccaccgc 32215963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 52325275 - 52325243
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  52325275 aaaatcattagatgtacttaatggtttccagca 52325243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 4169062 - 4169027
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4169062 aaaatcattagatgtacttaatgttttccagcagtt 4169027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 10473371 - 10473328
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  10473371 catcatcactgtaccggaatgccaaaaccattttgctgtggaaa 10473328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 38245777 - 38245738
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtg 97  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  38245777 catcatcaccgtaccggaatgccaaaaccattttgctgtg 38245738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 1728875 - 1728909
Alignment:
Q  98 gaaaatcattagatgtacttaatggtttccagcag 132  Q
    ||||| |||||||||||||||||||||||||||||    
T  1728875 gaaaaccattagatgtacttaatggtttccagcag 1728909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 10473151 - 10473101
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatc 149  Q
    |||| ||||||||||| |||||||||| || |||||||| |||||||||||    
T  10473151 aaaaccattagatgtagttaatggttttcaacagtttcctagccataaatc 10473101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 45256741 - 45256699
Alignment:
Q  59 atcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||    
T  45256741 atcatcaccgtaccggaatgccaaaaccattttgctgtagaaa 45256699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 18924053 - 18924020
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  18924053 aaaaccattagatgtacttaatggtttccagcag 18924020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 20862338 - 20862305
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||||||||||||||| |||||||||||||||||    
T  20862338 aaaatcattagatgtatttaatggtttccagcag 20862305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 38010682 - 38010649
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  38010682 aaaaccattagatgtacttaatggtttccagcag 38010649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 1e-89; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 497 - 777
Target Start/End: Complemental strand, 25193230 - 25192947
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| |||| || |||||||||||||||||||||||||||||||||    ||||||||||||| ||| ||||||||||||||||||| |||    
T  25193230 agaaatctaaggcgatatatgaaatcaacacaaaaaaggatgtctaaaaccgtgattt-tttttgatttggatggaattttgaactccggcgcggtggtg 25193132  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgag 692  Q
    |||||||||||||| || | ||||||||||||||||||||||| |||||||||||| | |||||||||||||||    ||| ||||||||||||||||||    
T  25193131 ccaccaccggccactgcgctagaatcatcatgtgtggccggaagagatgaagactcgtatgaattgtagagagagagggagagctttatgttttagtgag 25193032  T
Q  693 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || |||  |||||||||||||||||||| |||| ||||||    
T  25193031 agaaatgtttgaagcaaatgaagtttgatttggtgtaatttgagaagcctagaattattacacgtgtacactagatctaatggtt 25192947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 497 - 704
Target Start/End: Original strand, 4579552 - 4579763
Alignment:
Q  497 agaaatctaaggcaatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtg 596  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||    
T  4579552 agaaatctaaggcgatatttggaatcaacacaaaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagtattgaactccagcgcggtggtg 4579651  T
Q  597 ccaccaccggccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgag 692  Q
    |||||  |||||  ||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||    ||| ||||||||||||||||||    
T  4579652 ccaccggcggccgtcgtgccggaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgag 4579751  T
Q  693 agaaatgtttga 704  Q
    ||||||||||||    
T  4579752 agaaatgtttga 4579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 273 - 431
Target Start/End: Complemental strand, 25193456 - 25193297
Alignment:
Q  273 atccataatcgagttagaagaggtagagggagagttcgtacagcctaccacaacaaaattcgaaccg-atcggaacaacacttcaacacaacaacaaatc 371  Q
    ||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  25193456 atccagaatcggtttagaagaggtagagggagagttcgtacaacctaccacaacaagattcgaaccggatcggaacaacacttcaacacaacaacaaatc 25193357  T
Q  372 cgaaccggatcggagaagaagaccaaaacgcgaaacggatccgtgaagaacaagaggtag 431  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25193356 cgaaccggatcggagaagaagaccaaaacgcgaaacggatctgtgaagaacaagaggtag 25193297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 607 - 777
Target Start/End: Original strand, 18297947 - 18298121
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagtgc----tttatgttttagtgagagaaatgttt 702  Q
    ||||||| || |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |     ||||||||||||||||||||| | ||    
T  18297947 ccaccgcgccggaatcatcatgtgtggtcggaagagatgaagactcatctaaattgtagagagagagggagagatttatgttttagtgagagaaacgctt 18298046  T
Q  703 gaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||    
T  18298047 gaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggtt 18298121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 304 - 431
Target Start/End: Original strand, 4579360 - 4579488
Alignment:
Q  304 gagttcgtacagcctaccacaacaaaattcgaacc-gatcggaacaacacttcaacacaacaacaaatccgaaccggatcggagaagaagaccaaaacgc 402  Q
    ||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  4579360 gagttcgtacagcctacgacaacaagattcgaaccagatcgaaacaacacttcaacacaacaacaaatccgaaccgtattggagaagaagaccaaaacgc 4579459  T
Q  403 gaaacggatccgtgaagaacaagaggtag 431  Q
    |||||||||||||||||||||||||||||    
T  4579460 gaaacggatccgtgaagaacaagaggtag 4579488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 14550755 - 14550858
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 157  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14550755 catcatcaccataccggaatgccaaaaccattttgttgtggaaaaccattagatgtacttaatggtttccagcagtttcccagccataaatccctctaac 14550854  T
Q  158 atca 161  Q
    ||||    
T  14550855 atca 14550858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 20710426 - 20710318
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  20710426 aaaaccattagatgcacttaatggtttccagcagtttctcagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 20710327  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  20710326 accgtgaac 20710318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 18297580 - 18297688
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||    
T  18297580 aaaaccattagatgtacttaatggtttccagcagtttcccagctataaatccctctaacatcacaaagattaagaatcctgtaacaacttcagatctgaa 18297679  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  18297680 accgtgaac 18297688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 4579228 - 4579315
Alignment:
Q  190 agatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcaaattcatcaataaatcca 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4579228 agatctgaaaccgtgaacctcatgaacactaaaccacagaaaatcacataaacatcatctaccactctcgaattcatcaataaatcca 4579315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 658 - 777
Target Start/End: Complemental strand, 20709950 - 20709829
Alignment:
Q  658 aattgtagagagagagtg--ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 755  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||     
T  20709950 aattgtagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacat 20709851  T
Q  756 gtgtacactaaatctgatggtt 777  Q
    |||||||||| |||||||||||    
T  20709850 gtgtacactagatctgatggtt 20709829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 2264246 - 2264153
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccc 151  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2264246 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaaaccattagatgtacttaatggtttccagcagtttcccagtcataaatccc 2264153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 25193571 - 25193495
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25193571 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaaaccattagatgtacttaatggtttccagcagtt 25193495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 4579149 - 4579226
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagttt 135  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  4579149 catcatcaccgtaccggaatgccaaaatcattttgctgtggaaaaccattagatatacttaatggtttccagcagttt 4579226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 18297496 - 18297572
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    ||||||||||||||| |||||| |||||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  18297496 catcatcaccgtacctgaatgccaaaaccattttgctatggaaaaccattagatgtacttaatggtttccagcagtt 18297572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 25995402 - 25995342
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    ||||||||||||| |||||| || ||| |||||||||||||||||||||||||||||||||    
T  25995402 ttgatttggtgtaatttgagtagcctaggattattacacgtgtacactaaatctgatggtt 25995342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 620
Target Start/End: Original strand, 22186082 - 22186131
Alignment:
Q  571 gagttttgaactccggcgcggttgtgccaccaccggccaccgcaccagaa 620  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  22186082 gagttttgaactccggcgcggtggtgccaccaccggccaccgcgccagaa 22186131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 2264508 - 2264465
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  2264508 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaa 2264465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 4281738 - 4281798
Alignment:
Q  717 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||| ||||||||||| |  ||| ||||||||||||||||||||| |||||||||||    
T  4281738 ttgatttgctgtagtttgagaaacctaggattattacacgtgtacactagatctgatggtt 4281798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 17686470 - 17686391
Alignment:
Q  530 aaaaggatgtctaaaaccgtgaaaacttttt-gatttggacggagttttgaactccggcgcggttgtgccaccaccggcca 609  Q
    |||||||||| ||||| ||| |||||||||| ||||| || |||||||  |||||||||||||| ||||||||||||||||    
T  17686470 aaaaggatgtttaaaaacgtaaaaacttttttgatttaga-ggagtttgaaactccggcgcggtggtgccaccaccggcca 17686391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 611 - 658
Target Start/End: Complemental strand, 20710028 - 20709981
Alignment:
Q  611 cgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  20710028 cgcaccggaatcatcatgtgtgaccggaagagatgaagactcatctga 20709981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 4579009 - 4579051
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaa 100  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  4579009 catcatcaccgtaccggaatgccaaaaccattttgctgtggaa 4579051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 613
Target Start/End: Original strand, 20622454 - 20622492
Alignment:
Q  575 tttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  20622454 tttgaactccggcgcggtggtgccaccaccggccaccgc 20622492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 28479887 - 28479967
Alignment:
Q  529 aaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtgccaccaccggccac 610  Q
    ||||||||||| |||||  || |||| ||||||| ||||||| |||||  |||||||||||||| | |||||||||||||||    
T  28479887 aaaaaggatgtttaaaaatgtaaaaagtttttgaattggacg-agtttaaaactccggcgcggtggcgccaccaccggccac 28479967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 33308238 - 33308194
Alignment:
Q  570 ggagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  33308238 ggagttttgaaactccggcgcggtggtgccaccaccggccaccgc 33308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 742 - 777
Target Start/End: Original strand, 4579793 - 4579828
Alignment:
Q  742 taagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||| |||||||||||    
T  4579793 taagattattacacgtgtacactagatctgatggtt 4579828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 14550612 - 14550655
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||    
T  14550612 catcatcaccgtatcggaatgccaaaaccattttgctgtggaaa 14550655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 18297365 - 18297408
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||  |||||||||||| ||||||||    
T  18297365 catcatcaccgtaccggaatgtcaaaaccattttgctgtggaaa 18297408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 21851590 - 21851547
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  21851590 ggagtttaaaactccggcgcggtggtgccaccaccggccaccgc 21851547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 21860025 - 21859982
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  21860025 ggagtttaaaactccggcgcggtggtgccaccaccggccaccgc 21859982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 613
Target Start/End: Original strand, 25262584 - 25262627
Alignment:
Q  571 gagttttgaa-ctccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  25262584 gagttttgaaactccggcgcggtggtgccaccaccggccaccgc 25262627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 27425340 - 27425297
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  27425340 ggagtttcgaactccggcgcggtggtgccaccgccggccaccgc 27425297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Complemental strand, 27440386 - 27440343
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  27440386 ggagtttcgaactccggcgcggtggtgccaccgccggccaccgc 27440343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 613
Target Start/End: Original strand, 39756289 - 39756332
Alignment:
Q  570 ggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  39756289 ggagtttcgaactccggcgcggtggtgccaccgccggccaccgc 39756332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 4578749 - 4578791
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaa 100  Q
    ||||||||||||||| |||||| |||||||||||| |||||||    
T  4578749 catcatcaccgtacctgaatgccaaaaccattttgctgtggaa 4578791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 4578879 - 4578921
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaa 100  Q
    ||||||||| |||||||||||| |||||||||||| |||||||    
T  4578879 catcatcactgtaccggaatgccaaaaccattttgctgtggaa 4578921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 4281088 - 4281121
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  4281088 aaaaccattagatgtacttaatggtttccagcag 4281121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 613
Target Start/End: Complemental strand, 34543088 - 34543055
Alignment:
Q  580 actccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||||| ||||||||||||||||||||    
T  34543088 actccggcgcggtggtgccaccaccggccaccgc 34543055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 41345342 - 41345375
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcag 132  Q
    |||| |||||||||||||||||||||||||||||    
T  41345342 aaaaccattagatgtacttaatggtttccagcag 41345375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 100; Significance: 5e-49; HSPs: 4)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 618 - 777
Target Start/End: Original strand, 25072 - 25242
Alignment:
Q  618 gaatcatcatgtgtggccggaaaagatgaagactcatctgaattgtagagagagagt--gctttatgt---------tttagtgagagaaatgtttgaag 706  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |   |||||||||         |||||||||||||||||||||||    
T  25072 gaatcatcatgtgtggccggaagagatgaagactcatctgaattgtagagagagggaaagctttatgtctttatgtttttagtgagagaaatgtttgaag 25171  T
Q  707 caaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggtt 777  Q
    |||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||||    
T  25172 caaatgaagtttgatttggtgtagtttgagaaacctaagattatgacacgtgtacactaaatctgatggtt 25242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 24727 - 24828
Alignment:
Q  106 ttagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaaaccgtga 205  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  24727 ttagatgtacttaatggttttcagcagtttcccagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaaaccgtga 24826  T
Q  206 ac 207  Q
    ||    
T  24827 ac 24828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 24518 - 24559
Alignment:
Q  60 tcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  24518 tcatcaccgtaccggaatgccaaaaccattttgctgtggaaa 24559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 24659 - 24703
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaa 102  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||    
T  24659 catcttcaccgtaccggaatgccaaaaccattttgctgtggaaaa 24703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 89; Significance: 2e-42; HSPs: 3)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 28265 - 28157
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  28265 aaaaccattagatgtacttaatggtttccaccagtttcccagtcataaatccctctaacatcacaaagattttgaatctagtaacaacttcagatctgaa 28166  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  28165 accgtgaac 28157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 677 - 770
Target Start/End: Complemental strand, 27762 - 27669
Alignment:
Q  677 tttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatct 770  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  |||||||||||||||||||| ||||    
T  27762 tttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctagaattattacacgtgtacactagatct 27669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 658
Target Start/End: Complemental strand, 27867 - 27816
Alignment:
Q  607 ccaccgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    ||||||| || |||||||||||||||||||||| ||||||||||||||||||    
T  27867 ccaccgcgccggaatcatcatgtgtggccggaagagatgaagactcatctga 27816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 89; Significance: 2e-42; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 14265 - 14157
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatctgaa 198  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  14265 aaaaccattagatgcacttaatggtttccagcagtttctcagccataaatccctctaacatcacaaagatttcgaatccagtaacaacttcagatctgaa 14166  T
Q  199 accgtgaac 207  Q
    |||||||||    
T  14165 accgtgaac 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 658 - 777
Target Start/End: Complemental strand, 13789 - 13668
Alignment:
Q  658 aattgtagagagagagtg--ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 755  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||     
T  13789 aattgtagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacat 13690  T
Q  756 gtgtacactaaatctgatggtt 777  Q
    |||||||||| |||||||||||    
T  13689 gtgtacactagatctgatggtt 13668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 611 - 658
Target Start/End: Complemental strand, 13867 - 13820
Alignment:
Q  611 cgcaccagaatcatcatgtgtggccggaaaagatgaagactcatctga 658  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  13867 cgcaccggaatcatcatgtgtgaccggaagagatgaagactcatctga 13820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 203357 - 203453
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttcccagccataaatccctctaacatcataaagattttgaatccagtaacaacttcagatct 195  Q
    |||| |||||||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  203357 aaaaccattagatgtacttaatgattttcaggagttttccagccataaatccctctaacatcacaaagatttcgaatcgagtaacaacttcagatct 203453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 6247 - 6171
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaaatcattagatgtacttaatggtttccagcagtt 134  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  6247 catcatcaccgtaccggaatgccaaaaccattttgttgtggaaaaccattatatgtacttaatagtttccaacagtt 6171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 6378 - 6335
Alignment:
Q  58 catcatcaccgtaccggaatgcaaaaaccattttgttgtggaaa 101  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  6378 catcatcaccgtaccggaatgccaaaaccattttgctgtggaaa 6335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 6163 - 6126
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagcagtttc 136  Q
    |||| |||||||||||||||||||||||||||||||||    
T  6163 aaaaccattagatgtacttaatggtttccagcagtttc 6126  T

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Target: scaffold1120 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 613
Target Start/End: Original strand, 351 - 430
Alignment:
Q  534 ggatgtctaaaaccgtgaaaacttttt-gatttggacggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||| ||||| ||| |||||||||| ||||| || |||||||  |||||||||||||| ||||||||||||||||||||    
T  351 ggatgtttaaaaacgtaaaaacttttttgatttaga-ggagtttgaaactccggcgcggtggtgccaccaccggccaccgc 430  T

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Target: scaffold0206 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 613
Target Start/End: Original strand, 19467 - 19550
Alignment:
Q  529 aaaaaggatgtctaaaaccgtgaaaactttttgatttggacggagttttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    ||||||||||| |||||  || |||| ||||||| | ||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  19467 aaaaaggatgtttaaaaatgtaaaaagtttttgaatcgga-ggagtttagaactccggcgcggtggtgccaccgccggccaccgc 19550  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 96171 - 96139
Alignment:
Q  99 aaaatcattagatgtacttaatggtttccagca 131  Q
    |||||||||||||||||||||||||||||||||    
T  96171 aaaatcattagatgtacttaatggtttccagca 96139  T

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Target: scaffold1896 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1896
Description:

Target: scaffold1896; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 613
Target Start/End: Original strand, 437 - 475
Alignment:
Q  575 tttgaactccggcgcggttgtgccaccaccggccaccgc 613  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  437 tttgaactccggcgcggtggtgccactaccggccaccgc 475  T

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