View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13320_high_3 (Length: 402)
Name: NF13320_high_3
Description: NF13320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13320_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 2 - 385
Target Start/End: Complemental strand, 46992011 - 46991628
Alignment:
| Q |
2 |
catcaacctattcttgattagagcatgcaatagcccataatcagtaaatcaccacatccagtatagcccacgtatgatccccaagtgactcctgattgtt |
101 |
Q |
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| T |
46992011 |
catcaacctattcttgattagagcatgcaatagcccataatcagtaaaccaccacatccagtatagcccacgtatgatccccaagtgactcctgattgtt |
46991912 |
T |
|
| Q |
102 |
tgtgagtgtctggctccaaacagtaaaagatataatccaagattaatatggttaagcagcctctaaatgttgccttcctgcttcggcaattgaatctgag |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
46991911 |
tgtgagtgtctggctccaaacagtaaaagatataatccaagattaatatggttaagcagcctctaaatgttgccttcctgcttcggcaattgcatctgag |
46991812 |
T |
|
| Q |
202 |
aattagatcatgctcaataatcaatgctctgcaagttgattcagcaggagactgaaaatcttttaattcctccgagaagttattcagcctgggtatactc |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46991811 |
aattagatcatgctcaataatcaatgctctgcaagttgattcagcaggagactgaaaatcttttaattcctccgagaagttattcagcctgggtatactc |
46991712 |
T |
|
| Q |
302 |
taacaacgtgtgtggagagcggtagattttaacaagcgtccaatacagaatctcttccacttcaagctctccttctgctcttgc |
385 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46991711 |
taacaacatgtgtggagagcggtagattttaacaagcgtccaatacagaatctcttccacttcaagctctccttctgctcttgc |
46991628 |
T |
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