View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13321_low_6 (Length: 305)
Name: NF13321_low_6
Description: NF13321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13321_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 20 - 288
Target Start/End: Original strand, 45394695 - 45394963
Alignment:
| Q |
20 |
tcaagcaatttatttatctgaaatatgaaattaaatatacttaattgctattgttcttctgaataatttggagaacgattgattgacataataaaaatga |
119 |
Q |
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| T |
45394695 |
tcaagcaatttatttatctgaaatatgaaattaaatatacttaattgctattgttcttctgaataatttggagaacgattgattgacataataaaaatga |
45394794 |
T |
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| Q |
120 |
caaatatgattgaggttttcaattcgactaattatcatcttataattttgttactttgagataccaaattgttatatatgcctacaatatgaaaaactaa |
219 |
Q |
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| T |
45394795 |
caaatataattgaggttttcaattcgactaattatcatcttataattttgttactttgagataccaaattgttatatatgcctacaatatgaaaaactaa |
45394894 |
T |
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| Q |
220 |
aacggtgattttactcaattttgtattagaacccatccatgcacaatcatattctctatcatagttcat |
288 |
Q |
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| T |
45394895 |
aacggtgattttactcaattttgtattagaacccatccatgcacaatcatattctctatcatagttcat |
45394963 |
T |
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