View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13323_low_6 (Length: 333)
Name: NF13323_low_6
Description: NF13323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13323_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 24 - 322
Target Start/End: Original strand, 40286814 - 40287112
Alignment:
| Q |
24 |
ggtgcttagttggaaagtaaagccatgtcaggaacaaaattggcttattatgggtgatgtatgtatgaatgagtggtgaacatttgctcttggaaggtaa |
123 |
Q |
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| T |
40286814 |
ggtgcttagttggaaagtaaagccatgtcaggaacaaaattggcttattatgggtgatgtatgtatgaatgagtggtgaacatttgctcttggaaggtaa |
40286913 |
T |
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| Q |
124 |
ctatctatccaatcatcatcatcatgctaatgcacattttcaatgcacatatgtgcaattaccttttttcaaagatatagattaagaaaattaatttacg |
223 |
Q |
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| T |
40286914 |
ctatctatccaatcatcatcatcatgctaatgcacattttcaatgcacatatgtgcaattaccttttttcaaagatatagattaagaaaattaatttatg |
40287013 |
T |
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| Q |
224 |
aacaaataaatgtaacaattttataaagtcatctttaataggtattgactattaataattctaatattctacaactagtgaggttcctttcatattcat |
322 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40287014 |
aacaaataaatgtaacaattttataaagtcatctttaatagctattgactattaataattctaatattctacaactagtgaggttcctttcatattcat |
40287112 |
T |
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