View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13324_high_8 (Length: 312)

Name: NF13324_high_8
Description: NF13324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13324_high_8
NF13324_high_8
[»] chr3 (30 HSPs)
chr3 (3-300)||(15752475-15752773)
chr3 (3-291)||(21883305-21883598)
chr3 (3-293)||(49486707-49487002)
chr3 (70-300)||(21477444-21477674)
chr3 (15-287)||(2978225-2978497)
chr3 (117-300)||(15758268-15758452)
chr3 (115-300)||(21458331-21458514)
chr3 (116-300)||(21453158-21453340)
chr3 (118-300)||(21473104-21473287)
chr3 (118-289)||(21877164-21877336)
chr3 (118-293)||(49491204-49491380)
chr3 (118-276)||(2982181-2982338)
chr3 (24-187)||(2168741-2168904)
chr3 (24-170)||(9724730-9724877)
chr3 (24-187)||(3110599-3110761)
chr3 (24-187)||(13990738-13990901)
chr3 (24-187)||(23344282-23344445)
chr3 (24-187)||(40800728-40800891)
chr3 (24-187)||(13980746-13980909)
chr3 (17-123)||(39875622-39875726)
chr3 (24-128)||(44122179-44122282)
chr3 (24-123)||(15636446-15636544)
chr3 (24-129)||(17033028-17033132)
chr3 (24-123)||(3170301-3170399)
chr3 (24-129)||(12990834-12990940)
chr3 (61-131)||(29225230-29225300)
chr3 (24-133)||(7870266-7870375)
chr3 (18-173)||(20454520-20454673)
chr3 (60-128)||(20458942-20459009)
chr3 (62-128)||(27547151-27547217)
[»] chr4 (42 HSPs)
chr4 (3-300)||(16325694-16325992)
chr4 (3-296)||(12659171-12659464)
chr4 (3-300)||(30673677-30673977)
chr4 (3-300)||(1873970-1874270)
chr4 (3-300)||(23200407-23200707)
chr4 (17-300)||(910827-911106)
chr4 (17-267)||(12435360-12435606)
chr4 (17-267)||(42411006-42411252)
chr4 (118-300)||(16334738-16334921)
chr4 (18-267)||(29333537-29333782)
chr4 (86-300)||(25687536-25687749)
chr4 (118-300)||(30679770-30679951)
chr4 (118-300)||(1913709-1913892)
chr4 (117-300)||(23187962-23188144)
chr4 (70-300)||(12428861-12429090)
chr4 (116-300)||(18890000-18890184)
chr4 (120-300)||(25697304-25697483)
chr4 (122-296)||(12665689-12665859)
chr4 (118-267)||(42404643-42404788)
chr4 (17-239)||(4393790-4394012)
chr4 (120-300)||(12439270-12439449)
chr4 (118-267)||(917302-917447)
chr4 (118-300)||(33360159-33360341)
chr4 (61-216)||(42119796-42119952)
chr4 (3-91)||(25691379-25691471)
chr4 (24-187)||(20192682-20192845)
chr4 (24-143)||(6162155-6162272)
chr4 (24-129)||(22748791-22748895)
chr4 (24-134)||(13999902-14000013)
chr4 (24-123)||(54678741-54678838)
chr4 (15-129)||(53529590-53529703)
chr4 (118-300)||(48305320-48305499)
chr4 (25-126)||(13753520-13753619)
chr4 (24-123)||(20275773-20275871)
chr4 (24-123)||(26997061-26997159)
chr4 (118-300)||(55325479-55325663)
chr4 (24-128)||(12746722-12746825)
chr4 (24-129)||(6407841-6407945)
chr4 (99-187)||(53982075-53982164)
chr4 (60-94)||(2924088-2924122)
chr4 (15-140)||(7739894-7740018)
chr4 (75-140)||(19581992-19582057)
[»] chr1 (30 HSPs)
chr1 (3-300)||(37356709-37357007)
chr1 (3-300)||(18534957-18535257)
chr1 (3-300)||(31092925-31093225)
chr1 (3-300)||(11660059-11660358)
chr1 (115-300)||(37365127-37365313)
chr1 (118-300)||(35625228-35625411)
chr1 (17-267)||(38990999-38991244)
chr1 (17-248)||(28519173-28519405)
chr1 (118-300)||(27347143-27347326)
chr1 (118-300)||(18540683-18540864)
chr1 (118-301)||(38736039-38736223)
chr1 (118-300)||(11654020-11654201)
chr1 (118-300)||(31099531-31099712)
chr1 (118-300)||(7876091-7876271)
chr1 (118-267)||(38984912-38985057)
chr1 (116-267)||(28512810-28512955)
chr1 (24-188)||(33493026-33493190)
chr1 (24-140)||(27179108-27179223)
chr1 (24-131)||(29547646-29547753)
chr1 (24-129)||(145538-145643)
chr1 (24-187)||(15716530-15716693)
chr1 (24-128)||(11441842-11441944)
chr1 (118-300)||(39492740-39492921)
chr1 (24-123)||(40274590-40274687)
chr1 (24-140)||(17721623-17721739)
chr1 (24-129)||(22576022-22576126)
chr1 (29-128)||(26028599-26028699)
chr1 (16-129)||(27317501-27317612)
chr1 (60-133)||(16168704-16168777)
chr1 (24-129)||(15552770-15552874)
[»] chr2 (30 HSPs)
chr2 (3-299)||(24053266-24053562)
chr2 (3-300)||(43287369-43287667)
chr2 (3-300)||(19437515-19437814)
chr2 (3-300)||(25445037-25445336)
chr2 (118-300)||(43293114-43293297)
chr2 (116-299)||(24056601-24056784)
chr2 (118-300)||(19443090-19443271)
chr2 (118-300)||(25454699-25454876)
chr2 (15-131)||(5836224-5836339)
chr2 (118-239)||(31437151-31437273)
chr2 (24-187)||(22430254-22430417)
chr2 (24-187)||(22435848-22436011)
chr2 (17-187)||(43776891-43777060)
chr2 (24-140)||(636188-636303)
chr2 (24-128)||(19089369-19089472)
chr2 (24-131)||(25231889-25231996)
chr2 (24-172)||(1525548-1525696)
chr2 (24-140)||(7910101-7910216)
chr2 (24-128)||(19912169-19912272)
chr2 (24-131)||(14898689-14898795)
chr2 (24-133)||(17319660-17319769)
chr2 (24-128)||(11311954-11312058)
chr2 (118-239)||(31433045-31433167)
chr2 (24-128)||(7385002-7385108)
chr2 (29-134)||(16443472-16443578)
chr2 (17-128)||(34111139-34111248)
chr2 (24-94)||(21289730-21289799)
chr2 (166-239)||(8872289-8872362)
chr2 (157-217)||(5836153-5836213)
chr2 (17-128)||(26538914-26539026)
[»] scaffold0014 (2 HSPs)
scaffold0014 (3-300)||(111756-112058)
scaffold0014 (255-300)||(106130-106175)
[»] chr5 (23 HSPs)
chr5 (3-300)||(23053357-23053656)
chr5 (3-300)||(35264518-35264818)
chr5 (3-269)||(21171196-21171465)
chr5 (3-269)||(16675445-16675711)
chr5 (17-291)||(25365378-25365654)
chr5 (118-300)||(23058932-23059113)
chr5 (118-300)||(35270259-35270440)
chr5 (118-300)||(39653905-39654086)
chr5 (116-300)||(21178025-21178211)
chr5 (24-187)||(28367071-28367234)
chr5 (24-131)||(24213462-24213569)
chr5 (24-170)||(30957704-30957850)
chr5 (24-128)||(17945654-17945758)
chr5 (28-140)||(34648068-34648179)
chr5 (24-129)||(18080100-18080207)
chr5 (17-128)||(17604572-17604682)
chr5 (27-128)||(19699251-19699353)
chr5 (17-123)||(19479672-19479777)
chr5 (62-123)||(19780183-19780243)
chr5 (60-128)||(12026447-12026515)
chr5 (62-128)||(21575096-21575161)
chr5 (16-94)||(22231016-22231093)
chr5 (184-236)||(2135850-2135902)
[»] chr7 (26 HSPs)
chr7 (3-300)||(340269-340571)
chr7 (3-300)||(8247991-8248292)
chr7 (17-300)||(29185424-29185704)
chr7 (118-300)||(29176544-29176725)
chr7 (118-282)||(346521-346686)
chr7 (17-290)||(25830376-25830647)
chr7 (116-267)||(22822535-22822684)
chr7 (118-267)||(22826840-22826987)
chr7 (24-185)||(25498961-25499121)
chr7 (118-300)||(8242541-8242723)
chr7 (24-140)||(558010-558125)
chr7 (24-187)||(16648329-16648492)
chr7 (24-187)||(17622690-17622853)
chr7 (24-140)||(32148383-32148498)
chr7 (24-170)||(42208799-42208945)
chr7 (24-128)||(7578428-7578528)
chr7 (24-129)||(34326201-34326307)
chr7 (24-140)||(42162393-42162508)
chr7 (17-128)||(14719509-14719619)
chr7 (70-129)||(20125218-20125277)
chr7 (17-123)||(20362548-20362655)
chr7 (60-131)||(23818864-23818935)
chr7 (25-140)||(26456985-26457099)
chr7 (118-202)||(2068797-2068882)
chr7 (17-113)||(14997607-14997702)
chr7 (24-95)||(22477177-22477247)
[»] scaffold0102 (1 HSPs)
scaffold0102 (17-297)||(13924-14203)
[»] chr8 (19 HSPs)
chr8 (3-300)||(30714193-30714494)
chr8 (3-300)||(30721970-30722271)
chr8 (17-267)||(21247575-21247821)
chr8 (17-267)||(37209610-37209859)
chr8 (17-239)||(27679662-27679884)
chr8 (118-300)||(30727578-30727759)
chr8 (24-223)||(26196802-26197002)
chr8 (116-267)||(37204233-37204382)
chr8 (118-267)||(21241172-21241317)
chr8 (118-239)||(27683444-27683565)
chr8 (143-300)||(24042835-24042987)
chr8 (26-128)||(17909654-17909756)
chr8 (24-129)||(23429438-23429544)
chr8 (24-140)||(41048765-41048880)
chr8 (24-128)||(10738873-10738978)
chr8 (60-140)||(12756300-12756380)
chr8 (118-210)||(26196996-26197089)
chr8 (18-123)||(16845855-16845959)
chr8 (3-116)||(8509666-8509778)
[»] chr6 (10 HSPs)
chr6 (17-267)||(23427381-23427627)
chr6 (118-295)||(18738573-18738749)
chr6 (118-291)||(33660877-33661052)
chr6 (118-267)||(23421636-23421781)
chr6 (24-170)||(14855842-14855989)
chr6 (62-131)||(19441313-19441382)
chr6 (24-128)||(17270338-17270442)
chr6 (24-185)||(6932946-6933107)
chr6 (17-129)||(19816721-19816832)
chr6 (27-129)||(25397825-25397924)
[»] scaffold0079 (1 HSPs)
scaffold0079 (118-300)||(57939-58122)
[»] scaffold0591 (1 HSPs)
scaffold0591 (118-291)||(9323-9496)
[»] scaffold0004 (1 HSPs)
scaffold0004 (24-187)||(345761-345924)
[»] scaffold0066 (1 HSPs)
scaffold0066 (17-131)||(11493-11607)
[»] scaffold0124 (1 HSPs)
scaffold0124 (24-140)||(39349-39463)
[»] scaffold0258 (1 HSPs)
scaffold0258 (120-300)||(6256-6435)
[»] scaffold0081 (1 HSPs)
scaffold0081 (17-113)||(7664-7759)
[»] scaffold0062 (2 HSPs)
scaffold0062 (61-128)||(19754-19820)
scaffold0062 (61-128)||(29922-29988)


Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 15752773 - 15752475
Alignment:
Q  3 attatcatacacaagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 102  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15752773 attatcatacacaagatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 15752674  T
Q  103 acatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagct 201  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15752673 acatccaagggggaatgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagct 15752574  T
Q  202 actctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||    
T  15752573 actctattttcttataaatagagctcatttgtaacattgagatacacacattagtgaataagaatactgctctaattctctcttcttctccttctctct 15752475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 3 - 291
Target Start/End: Original strand, 21883305 - 21883598
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  21883305 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctaataaggttttaatgaggcatatcctca 21883404  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  21883405 atggacatccaagggggagtgttataaatattaatagcggatgtccaaatagcaaatgtgttattgagccatactactaggttattgggcttagttcata 21883504  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctc 291  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||| | |||||||||||| ||||||||    
T  21883505 agctactctattttcttataaatagagctcatttgtaacattgggatacacacatcagtgaataggaatatttctcctattctctcttcttctc 21883598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 49487002 - 49486707
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  49487002 attatcatacacaaaagggatattgtactctttttccttcactagaatttttcttctattaggtttttctctagtaaggttttaatgaggcatatcctca 49486903  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||||||| |||||||||| ||||| ||||||    
T  49486902 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgagcttaattcata 49486803  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctcct 293  Q
     ||||||||||||   |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  49486802 ggctactctatttctctataaatagagctcatttgtaacattgagatacacacatcagtgaataagaatactgctcctattctctcttcttctcct 49486707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 70 - 300
Target Start/End: Original strand, 21477444 - 21477674
Alignment:
Q  70 tagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggacca 168  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| |||    
T  21477444 tagtaaggtgttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaa-tgtgttattgggcca 21477542  T
Q  169 tactactaggttattgggcttagttcataagctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatac 268  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||  || |||||||||||    
T  21477543 tactactaggttattgggcttagttcataagctactttatttttttataaatagggctcatttgtaacattgagatacacacatcggtaaataagaatac 21477642  T
Q  269 tactcctattctctattcttctccttctctct 300  Q
    | |||||||||||| ||||||| |||||||||    
T  21477643 tgctcctattctctcttcttcttcttctctct 21477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 15 - 287
Target Start/End: Complemental strand, 2978497 - 2978225
Alignment:
Q  15 aagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggg 114  Q
    |||||||| ||||||||||||||||||||||||||| | |   | ||||||  | || |||||||||||||||||||||| || ||||||||||||||||    
T  2978497 aagatattgtactctttttccttcactagaattttttttcccatgggttttattttaataaggttttaatgaggcatatcctcgatggacatccaagggg 2978398  T
Q  115 gagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttct 213  Q
    |||||||||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  2978397 gagtgttataaatattaatagtggatgtccaaataacaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctattttcc 2978298  T
Q  214 tataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattct 287  Q
    ||||||||||||||||||||||||||  |||| |||||| |||||||||||||| | |||| |||||||| ||||    
T  2978297 tataaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatatttctccttattctctcttct 2978225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 117 - 300
Target Start/End: Complemental strand, 15758452 - 15758268
Alignment:
Q  117 gtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15758452 gtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttctta 15758353  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||    
T  15758352 taaatagagctcatttgtaacattgagatacacacattagtgaataagaatactgctctaattctctcttcttctccttctctct 15758268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 115 - 300
Target Start/End: Original strand, 21458331 - 21458514
Alignment:
Q  115 gagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttct 213  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21458331 gagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttct 21458430  T
Q  214 tataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||   ||||||||||||||||    
T  21458431 tataaatagagctcatttgtaacattgggatacacacatcagtgaataagaatactgctcctattctc---tcttctccttctctct 21458514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 116 - 300
Target Start/End: Original strand, 21453158 - 21453340
Alignment:
Q  116 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 214  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21453158 agtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttctt 21453257  T
Q  215 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||   ||||||||||||||||    
T  21453258 ataaatagagctcatttgtaacattgggatacacacatcagtgaataagaatactgctcctattctc---tcttctccttctctct 21453340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 21473104 - 21473287
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  21473104 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactattagcttattggacttagttcataagctactctattttcttat 21473203  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  21473204 aaatagagctcatttgtaacattgagatacacacatcagtgaataagaatactgctcctattctctcttcttctccttctctct 21473287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 118 - 289
Target Start/End: Original strand, 21877164 - 21877336
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21877164 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 21877263  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttc 289  Q
    |||| ||||||||||||||||||  ||||||||||| |||||||| ||||| | |||||||||||| ||||||    
T  21877264 aaatggagctcatttgtaacattgggatacacacatcagtgaataggaatatttctcctattctctcttcttc 21877336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 118 - 293
Target Start/End: Complemental strand, 49491380 - 49491204
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||| ||||| |||||| ||||||||||||   |||    
T  49491380 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgagcttaattcataggctactctatttctctat 49491281  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctcct 293  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||||| ||||||||||    
T  49491280 aaatagagctcatttgtaacattgagatacacacatcagtgaataagaatactgctcatattctctcttcttctcct 49491204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 118 - 276
Target Start/End: Complemental strand, 2982338 - 2982181
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  2982338 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggctatactactaggttattgggcttagttcataagctactctatttccctat 2982239  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactccta 276  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||||||| | ||||||    
T  2982238 aaatagagctcatttgtaacatt--gatatacacataagtgaataagaatatttctccta 2982181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 2168904 - 2168741
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  2168904 tactctttttccttcactggaattttt-tcccattgggtttttctctagtaaggttttaatgaggcatatccgatatggacatccaagggggagtgttat 2168806  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  2168805 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 2168741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 24 - 170
Target Start/End: Complemental strand, 9724877 - 9724730
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||||||||||||  ||  |  |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  9724877 tactctttttccttcactagaattttttcccactggggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 9724778  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccata 170  Q
     ||||||| |||||||| | || ||||||| || ||||||||| ||||    
T  9724777 gaatattactagtggatgtccatatagcaattgggttattggatcata 9724730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 3110761 - 3110599
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  3110761 tactctttttccttcactggaattttt-tcccattgggtttttct-tagtaaggttttaatgaggcatatctgagatggacatccaagggggagtgttat 3110664  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  3110663 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 3110599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 13990738 - 13990901
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  13990738 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 13990836  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  13990837 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 13990901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 23344282 - 23344445
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  23344282 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 23344380  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  23344381 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 23344445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 40800891 - 40800728
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  40800891 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 40800793  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  40800792 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 40800728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 13980909 - 13980746
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||| | |||||||| ||| | ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||  |||||||||    
T  13980909 tactctttttccttcaatggaattttt-tcccactaggtttttctttagtaaggttttaatgaggcatatcctcgatggacatccaaggaagagtgttat 13980811  T
Q  124 aaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| || | |||| || || ||||||||  ||||||| ||| |||||||||    
T  13980810 gaatattataagtggatgtctatataggaattgggttattgggtcatactattagcttattgggc 13980746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 39875622 - 39875726
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |||||| |  |||||||||||||| |||    
T  39875622 gatattgtactctttttccttcactagaatttttttcc-attaggtttttttctagtaaggttttaatgagacatatcct-gatggacatccaaggagga 39875719  T
Q  117 gtgttat 123  Q
    |||||||    
T  39875720 gtgttat 39875726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 44122282 - 44122179
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||| ||||| ||| ||| | ||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  44122282 tactctttttccttcactagattttttttcccattggatttttctatagtaaggttttaatgaggcatatcct-gatggacatccaagggggagtgttat 44122184  T
Q  124 aaata 128  Q
     ||||    
T  44122183 gaata 44122179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 15636544 - 15636446
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||| |||||| |  | | |||||||||||||||||||||    
T  15636544 tactctttttccttcactagaatttttcccc-attgggtttttctctagtaaggttttaatgagacatatccttgacgaacatccaagggggagtgttat 15636446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 17033028 - 17033132
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||||||||| ||| |   ||||||| ||||||||||||||||||||||||||| |  | |||||||||||| ||||||||||    
T  17033028 tactctttttccttcactagaatttttttcc-agcgggtttttttctagtaaggttttaatgaggcatatccttgaaggacatccaaggaggagtgttat 17033126  T
Q  124 aaatat 129  Q
     |||||    
T  17033127 gaatat 17033132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 3170399 - 3170301
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||| |||||||||||| ||| ||   |||||||||||||||||||||||||||| ||||| || |||||||||||| ||| ||||||||    
T  3170399 tactctttttcctttactagaatttttttcc-atcgagtttttctctagtaaggttttaatgaggtatatcctcgatggacatccaaagggaagtgttat 3170301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 12990834 - 12990940
Alignment:
Q  24 tactctttttccttcactagaatttttctc-ctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtta 122  Q
    ||||||||||||||||||||| ||||| |  | |||  |||||||||||||||||||||||||| ||||||| |  |||||||||||||||| |||||||    
T  12990834 tactctttttccttcactagattttttttttccattgagtttttctctagtaaggttttaatgaagcatatccttgatggacatccaaggggaagtgtta 12990933  T
Q  123 taaatat 129  Q
    | |||||    
T  12990934 tgaatat 12990940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 29225230 - 29225300
Alignment:
Q  61 gtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatatta 131  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||| | |||| |||| |||||||    
T  29225230 gtttttctctaataaggttttaatgaggcatatcttcgatggacatccaagagagagtattatgaatatta 29225300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 7870375 - 7870266
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||| ||||||| ||||||| |   ||| ||||||||||||||||||||||| |||||| |||| |  || ||||||||||||||||| ||||    
T  7870375 tactctttttctttcactataatttttttttcattgggtttttctctagtaaggttttagtgaggcgtatccttgatagacatccaagggggagtattat 7870276  T
Q  124 aaatattaat 133  Q
     |||| ||||    
T  7870275 gaataataat 7870266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 20454520 - 20454673
Alignment:
Q  18 atattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggag 117  Q
    |||||||||||| |||  ||||||||||||| | |||||||| ||||||||||||||| |||||||| || |||||| |  |||||||||| | |  |||    
T  20454520 atattatactctctttt-ttcactagaatttgt-tcctattaagtttttctctagtaaagttttaattagccatatccttgatggacatcc-atgatgag 20454616  T
Q  118 tgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatacta 173  Q
    ||||| ||||||||  ||||||| | || ||||||| || ||||||||| |||||||    
T  20454617 tgttacaaatattataagtggatgtccatatagcaattgggttattggatcatacta 20454673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 20459009 - 20458942
Alignment:
Q  60 ggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaata 128  Q
    |||||||||||||||||||||||||||| |||||| |  |||| |||||||||||||||||||| ||||    
T  20459009 ggtttttctctagtaaggttttaatgagacatatcct-gatgggcatccaagggggagtgttatgaata 20458942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 27547151 - 27547217
Alignment:
Q  62 tttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaata 128  Q
    |||||||||||||||||||||||||| ||| ||||  |||||||||||||  |||||||||| ||||    
T  27547151 tttttctctagtaaggttttaatgagacatgtctttgatggacatccaagcaggagtgttatgaata 27547217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 16325992 - 16325694
Alignment:
Q  3 attatcatacacaagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 102  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16325992 attatcatacacaagatattgtactcttttaccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 16325893  T
Q  103 acatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagct 201  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16325892 acatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagct 16325793  T
Q  202 actctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |  ||||||||||| |||||||||||||||||    
T  16325792 actatattttcttataaatagagctcatttgtaacattgagatacacacattattgaataagaatattgttcctattctctcttcttctccttctctct 16325694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 3 - 296
Target Start/End: Complemental strand, 12659464 - 12659171
Alignment:
Q  3 attatcatacacaagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 102  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12659464 attatcatacacaagatattgtactctttttccttcactagaatttt-ctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 12659366  T
Q  103 acatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagct 201  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12659365 acatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagct 12659266  T
Q  202 actctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttct 296  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||    
T  12659265 actctattttcttataaatagagctcatttgtaacactgagatacacacattagtgaataagaatactgctcatattctctcttcttctcattct 12659171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 30673977 - 30673677
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30673977 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctca 30673878  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  30673877 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcata 30673778  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||| | ||||||||||| ||||||||||||||  |||| | ||||||||||||||||||||| ||| |||||||| | ||||||||||||    
T  30673777 agctactctatttccctataaatagagttcatttgtaacatt--gataaatacattagtgaataagaatactgctcttattctctctccttctccttctc 30673680  T
Q  298 tct 300  Q
    |||    
T  30673679 tct 30673677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 1874270 - 1873970
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  1874270 attatcatacacaaaaaggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaacgaggcatatcctca 1874171  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||||||| || ||||||||||||| ||||||    
T  1874170 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattatgttattgggcttaattcata 1874071  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
     |||||||||||| | |||||||| ||||||||||||||||| ||||  |||||| ||||||||||||||||  |||||||||||  |||||||||||||    
T  1874070 ggctactctatttccctataaatatagctcatttgtaacattgagat--acacatcagtgaataagaatacttttcctattctctcctcttctccttctc 1873973  T
Q  298 tct 300  Q
    |||    
T  1873972 tct 1873970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 300
Target Start/End: Original strand, 23200407 - 23200707
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23200407 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctca 23200506  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    ||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  23200507 atggacatctaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactagtttattgggcttagttcata 23200606  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    || ||||||| || | |||||||||| |||||||||||||||  |||| ||| || || ||||| |||||||  ||||||||||| ||||||||||||||    
T  23200607 agttactctacttccctataaatagaactcatttgtaacatt--gatagacagatcagcgaatacgaatactgttcctattctctcttcttctccttctc 23200704  T
Q  298 tct 300  Q
    |||    
T  23200705 tct 23200707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 17 - 300
Target Start/End: Complemental strand, 911106 - 910827
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||| ||||| ||| |   ||||||  | ||||||||||||||||||||||||| || ||||||||||||| || |    
T  911106 gatattgtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagaggaa 911007  T
Q  117 gtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  911006 gtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctattttccta 910908  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||||  |||||||| || |||||||||||||||| |||||||| ||  |||||||||||||||||    
T  910907 taaatagagctcatttgtaacatt--gatacacagatcagtgaataagaatactgctcctattttc--ttcttctccttctctct 910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 267
Target Start/End: Complemental strand, 12435606 - 12435360
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||| ||||| ||| |   ||||||  | ||||||||||||||||||||||||| || ||||||||||||||||||    
T  12435606 gatattgtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggga 12435507  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||| ||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  12435506 gtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttcccta 12435408  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    ||||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  12435407 taaatagagctcatttgtaacatt--gatacacac--tagtgaataagaata 12435360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 42411006 - 42411252
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||| ||||| ||| |   ||||||  | ||||||||||||||||||||||||| || ||||||||||||||||||    
T  42411006 gatattgtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggga 42411105  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||| ||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  42411106 gtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttcccta 42411204  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    ||||||||||||||||||||||||  |||||| ||  |||||||||||||||    
T  42411205 taaatagagctcatttgtaacatt--gatacaaac--tagtgaataagaata 42411252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 16334921 - 16334738
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16334921 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactatattttcttat 16334822  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |  ||||||| ||| |||||||||||||||||    
T  16334821 aaatagagctcatttgtaacattgagatacacacattattgaataagaatattgttcctattatctcttcttctccttctctct 16334738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 29333537 - 29333782
Alignment:
Q  18 atattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggag 117  Q
    ||||| ||||||||||||||||||||| ||||| ||| |   ||||||  | ||||||||||||||||||||||||| || |||||||||||||||||||    
T  29333537 atattgtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggag 29333636  T
Q  118 tgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| ||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||| | |||    
T  29333637 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataacctactctatttccctat 29333735  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    ||||| |||||||||||||||||  |||||||||  |||||||||||||||    
T  29333736 aaataaagctcatttgtaacatt--gatacacac--tagtgaataagaata 29333782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 86 - 300
Target Start/End: Complemental strand, 25687749 - 25687536
Alignment:
Q  86 aggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattg 184  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||| ||||||    
T  25687749 aggcatatcctcaatgaacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactagtttattg 25687650  T
Q  185 ggcttagttcataagctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctat 284  Q
    |||||| ||||||||||||||||||| | |||||| |||||||||||||||||||  |||| | | || |||||||||||||||| |||||||| ||| |    
T  25687649 ggcttaattcataagctactctatttccctataaacagagctcatttgtaacatt--gatatatagatcagtgaataagaatactgctcctattttctct 25687552  T
Q  285 tcttctccttctctct 300  Q
    ||||||||||||||||    
T  25687551 tcttctccttctctct 25687536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 30679951 - 30679770
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  30679951 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttccctat 30679852  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  |||| | ||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  30679851 aaatagagctcatttgtaacatt--gataaatacattagtgaataagaatactgctcttattctctcttcttctccttctctct 30679770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 1913892 - 1913709
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||| | |||    
T  1913892 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactctatttccctat 1913793  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||||| ||||||||| |||||||    
T  1913792 aaatagagctcatttgtaacattgagatacacacatcagtgaataagaatactgctcatattctctcttcttctccgtctctct 1913709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 117 - 300
Target Start/End: Original strand, 23187962 - 23188144
Alignment:
Q  117 gtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| | ||    
T  23187962 gtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtggaccatactactagtttattgagcttagttcataagctactctatttcccta 23188061  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||||  |||| ||| || ||||||||||||||||  ||||||||||  |||||||||||||||||    
T  23188062 taaatagagctcatttgtaacatt--gatagacagataagtgaataagaatactgttcctattctcacttcttctccttctctct 23188144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 70 - 300
Target Start/End: Complemental strand, 12429090 - 12428861
Alignment:
Q  70 tagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggacca 168  Q
    |||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||  |||  ||| |||    
T  12429090 tagtaaagtcttaatgaggcatatcctcaatggacatccaaggaggagtgttataaatattaatagtggatgtccaaagagcaaataggtttatgggcca 12428991  T
Q  169 tactactaggttattgggcttagttcataagctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatac 268  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |  ||   | | ||  ||||||||||||||    
T  12428990 tactaataggttattgggcttagttcataagctactctatttccctataaatagaactcatttgtaacagt--gagtgagagatccgtgaataagaatac 12428893  T
Q  269 tactcctattctctattcttctccttctctct 300  Q
    | |||||||||||| |||||||||||||||||    
T  12428892 tgctcctattctctcttcttctccttctctct 12428861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 116 - 300
Target Start/End: Original strand, 18890000 - 18890184
Alignment:
Q  116 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 214  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||||||| | |    
T  18890000 agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccct 18890099  T
Q  215 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattcttctccttctctct 300  Q
    ||||||||| |||||||||||||||  |||| ||||||||||||||||||||| | |||| |||||||| |||||||| ||||||||    
T  18890100 ataaatagaactcatttgtaacatt--gatatacacattagtgaataagaatatttctccttattctctcttcttctctttctctct 18890184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 25697483 - 25697304
Alignment:
Q  120 ttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataa 218  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||| |||| ||||||||||||||||||| | |||||    
T  25697483 ttataaatattaatagtggatatccaaatagcaaatgtgttagtgggccatactactagtttattggacttaattcataagctactctatttccctataa 25697384  T
Q  219 atagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||  |||| | | || |||||||||||||||| |||||||| ||| |||||||||||||||||    
T  25697383 atagagctcatttgtaacatt--gatatatagatcagtgaataagaatactgctcctattttctcttcttctccttctctct 25697304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 122 - 296
Target Start/End: Complemental strand, 12665859 - 12665689
Alignment:
Q  122 ataaatattaatagtggatat----caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttata 217  Q
    ||||||||||||||||||| |    ||||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12665859 ataaatattaatagtggatgttgtccaaataataaatgtgttattgggccatactactaggttattgg-cttagttcataagctactctattttcttata 12665761  T
Q  218 aatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttct 296  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  12665760 aatagagctcatttgt-------agatacacacattagtgaataagaatactgctcctattctctcttcttctccttct 12665689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 42404643 - 42404788
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||    
T  42404643 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 42404741  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  42404742 aaatagagctcatttgtaacatt--gatacacac--tagtgaataagaata 42404788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 4394012 - 4393790
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| |||| ||||||||||||||||  |||| ||| | |  | |||||||||||||||||||| ||||| ||||| || |||||||||||| || ||    
T  4394012 gatattgtactatttttccttcactagatattttttcc-actgagattttctctagtaaggttttattgaggtatatcctcgatggacatccaatggaga 4393914  T
Q  117 gtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||||||||| || ||||| |||||| ||||  |   ||||||||||| ||||| || ||| ||||||||||||| ||||| | ||    
T  4393913 gtgttataaatattaatagtggatgtctaaataacaaatgggttaacgagtcatactactagattattaggtttaattcataagctactttatttcccta 4393814  T
Q  216 taaatagagctcatttgtaacatt 239  Q
    |||||| |||||||||||||||||    
T  4393813 taaataaagctcatttgtaacatt 4393790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 12439449 - 12439270
Alignment:
Q  120 ttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataa 218  Q
    ||||||||||||||||||||| || |||||||||||  |||  ||| |||||||| |||||||||||||||||||||||||||||||||||| | |||||    
T  12439449 ttataaatattaatagtggatgtccaaatagcaaataggtttatgggccatactaataggttattgggcttagttcataagctactctatttccctataa 12439350  T
Q  219 atagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||| ||||||||||||| |  ||   | | ||  ||||||||||||||| ||| |||||||| |||||||||||||||||    
T  12439349 atagaactcatttgtaacagt--gagtgagagatcggtgaataagaatactgctcatattctctcttcttctccttctctct 12439270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 267
Target Start/End: Complemental strand, 917447 - 917302
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||| ||| | ||||||||||||| | ||||||||||||||||||||||||||| | |||    
T  917447 tgttataaatattaatattggatgtctaaatagcaaatatgttagtgggctatactactaggtt-tcgggcttagttcataagctactctatttccctat 917349  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||  |||||||||  |||||||||| ||||    
T  917348 aaatagagctcatttgtaacatt--gatacacac--tagtgaataaaaata 917302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 33360341 - 33360159
Alignment:
Q  118 tgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||| |||| || | |||||||||||||||||| | ||| |||||| || ||||||| | |||||| ||||||||||||||||||||||    
T  33360341 tgttataaatattaagagtgaatgtacaaatagcaaatgtgttagttgactatactattaagttattgagtttagtttataagctactctattttcttat 33360242  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactact-cctattctctattcttctccttctctct 300  Q
    |||||||||||||| |||||||| ||||  |  ||| ||||||||| ||| || || |||||||||| ||||||  |||||||||    
T  33360241 aaatagagctcattcgtaacattgagat--atgcataagtgaataaaaatgcttctccctattctctcttcttcaacttctctct 33360159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 42119952 - 42119796
Alignment:
Q  61 gtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgtt 159  Q
    |||||||||||||||| ||||||||||||||||| ||||||  | |||||||| || ||||||||||||||||||||||| | |||||||||||||  ||    
T  42119952 gtttttctctagtaagattttaatgaggcatatcctcaatgagcttccaagggagaatgttataaatattaatagtggatgtccaaatagcaaatggatt 42119853  T
Q  160 attggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    | |||  ||||||||||| |||||| ||||| | ||||| ||||| |||||| ||||    
T  42119852 aatgggtcatactactagattattgagcttaatccataaactactttatttttttat 42119796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 25691471 - 25691379
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcat 91  Q
    ||||||||||||||    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25691471 attatcatacacaaaagggatattgtacgctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcat 25691379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 20192845 - 20192682
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||  ||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  20192845 tactctttttccttcactgaaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgatatggacatccaagggggagtgttat 20192747  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  20192746 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 20192682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 6162155 - 6162272
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | ||||||||||||||||||| |||||||||||||||    |||||||||||||||||||||||||    
T  6162155 tactctttttccttcactggaattttt-tcc-actgggtttttctctagtaaggtgttaatgaggcatatccgagatggacatccaagggggagtgttat 6162252  T
Q  124 aaatattaatagtggatatc 143  Q
     |||||||  ||||||||||    
T  6162253 gaatattacaagtggatatc 6162272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 22748791 - 22748895
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||  |  |||||||| ||||||| ||||||||    
T  22748791 tactctttttccttcactagaatttttttcc-attgagtttttctctagtaaggttttaatgaggcatattcttgatggacattcaaggggaagtgttat 22748889  T
Q  124 aaatat 129  Q
     |||||    
T  22748890 gaatat 22748895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 13999902 - 14000013
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaa-ggttttaatgaggcatatcttcaatggacatccaagggggagtgtta 122  Q
    ||||||||||||||||||||||||||| | | |  ||||||||||||| ||| ||||||||||||||||||| |  || |||||||||||||||||||||    
T  13999902 tactctttttccttcactagaattttttttcgaccaggtttttctctactaaaggttttaatgaggcatatccttcatagacatccaagggggagtgtta 14000001  T
Q  123 taaatattaata 134  Q
    | |||| |||||    
T  14000002 tgaataataata 14000013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 54678838 - 54678741
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||| |||||||||||||||||||||| ||| |||  |||||||| ||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  54678838 tactatttttccttcactagaatttttttcc-attgagtttttctttagtaaggttttaatgaggcatatcctc-atagacatccaagggggagtgttat 54678741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 53529590 - 53529703
Alignment:
Q  15 aagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggg 114  Q
    ||||| || ||||||||||| |||  | |||||||| |||||||||||||||||||||||||||||||| |||||||||| |  |||||||| ||| |||    
T  53529590 aagatgttgtactctttttcattcgattgaattttt-tcctattaggtttttctctagtaaggttttaacgaggcatatccttgatggacattcaatggg 53529688  T
Q  115 gagtgttataaatat 129  Q
    ||||||||| |||||    
T  53529689 gagtgttatgaatat 53529703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 48305499 - 48305320
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||| ||||||| || |||||||||| | |||| ||| |||||| ||||| |||||| |||||||| ||| |||||||||||| | |||    
T  48305499 tgttataaatattaaaagtggatgtccaaatagcaaacgcgttaatgggccataccactagattattgagcttagtttatatgctactctatttccctat 48305400  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||| ||| |||||||||| || ||   |||| |||||||||||||| | | | |||||||| |||||||| ||||||||    
T  48305399 aaatagagttca-ttgtaacattcag-ta-gtacatcagtgaataagaatatttc-cttattctctcttcttctctttctctct 48305320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 13753619 - 13753520
Alignment:
Q  25 actctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttata 124  Q
    |||||||||||||||||||||||||| ||| |||||||| || | |||||| |||||| ||||||||||| |  |||||||||||| |||||||||||||    
T  13753619 actctttttccttcactagaatttttttcc-attaggttatttt-tagtaatgttttattgaggcatatccttgatggacatccaaaggggagtgttata 13753522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 20275773 - 20275871
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||| |||||||||||||||| |   ||| | |||||||||||||||||||||| ||| |||||| |  |||||||||||||||||||||||||    
T  20275773 tactcttttttcttcactagaatttttttttcattggatttttctctagtaaggttttaacgagacatatcat-gatggacatccaagggggagtgttat 20275871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 26997061 - 26997159
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||| ||||||||||| | | ||| | ||||||||| |||||||||||| ||| |||||| |  |||||||||||||||||||||||||    
T  26997061 tactctttttccttcgctagaattttttttccattggatttttctcttgtaaggttttaacgagacatatcct-gatggacatccaagggggagtgttat 26997159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 55325479 - 55325663
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattgg---accatactactaggttattgggcttagttcataagctactctattttct 213  Q
    ||||||||||||||||| | ||| || ||||||||||||||||| |||   |  |||||| ||||||||||  |||||||||||| ||||| ||||| |     
T  55325479 tgttataaatattaataatagatgtccaaatagcaaatgtgttagtgggtcataatactattaggttattgaacttagttcataaactactttatttccc 55325578  T
Q  214 tataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactc-ctattctctattcttctccttctctct 300  Q
    |||||||| ||||||||||| ||||| |||   | |||| ||||||||| |||||| |||  ||||||||  ||||||| ||||||||    
T  55325579 tataaataaagctcatttgttacattgaga---aaacatcagtgaataataatacttctctttattctctcatcttctcattctctct 55325663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 12746825 - 12746722
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||| ||||||| ||||||| | | ||| ||||||| | |||||||||||||||||||| |||| |  |||||||| ||||||||||||||||    
T  12746825 tactctttttcattcactataattttttttccattgggtttttttatagtaaggttttaatgaggcgtatcct-gatggacattcaagggggagtgttat 12746727  T
Q  124 aaata 128  Q
     ||||    
T  12746726 gaata 12746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 6407841 - 6407945
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||||  |||||| ||| ||| || |||||| ||||| ||||||||||| | ||||| || ||||||||| |||||||||| ||||    
T  6407841 tactctttttccttcactaagatttttttcccattgggcttttct-tagtatggttttaatgatgtatatcctcgatggacatctaagggggagttttat 6407939  T
Q  124 aaatat 129  Q
     |||||    
T  6407940 gaatat 6407945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 53982075 - 53982164
Alignment:
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
    ||||||||||||||||||||||||| |||||||  ||||||| | || ||||||| || |||||| || ||||||  ||| |||||||||    
T  53982075 atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaattgggttatttgatcatactgttagcttattgggc 53982164  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 2924122 - 2924088
Alignment:
Q  60 ggtttttctctagtaaggttttaatgaggcatatc 94  Q
    |||||| ||||||||||||||||||||||||||||    
T  2924122 ggttttactctagtaaggttttaatgaggcatatc 2924088  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 7740018 - 7739894
Alignment:
Q  15 aagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggg 114  Q
    ||||| || |||| |||||||||||||||||||||| | | | | ||||||||  |||||| ||||||||||  |||||  || ||| | || ||| ||     
T  7740018 aagatgttgtactttttttccttcactagaattttt-ttcaagtgggtttttcattagtaaagttttaatgaaccatattctcgatgaatattcaatgga 7739920  T
Q  115 gagtgttataaatattaatagtggat 140  Q
    |||||||||||||||||  |||||||    
T  7739919 gagtgttataaatattataagtggat 7739894  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 19581992 - 19582057
Alignment:
Q  75 aggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggat 140  Q
    ||||||||||||| ||||||||  ||||||||| |||| |||||||||| ||| |||  |||||||    
T  19581992 aggttttaatgagacatatctttgatggacatctaaggaggagtgttatgaattttataagtggat 19582057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 37357007 - 37356709
Alignment:
Q  3 attatcatacacaagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 102  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37357007 attatcatacacaagatattgtactctttttccttcactaaaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 37356908  T
Q  103 acatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagct 201  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37356907 acatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagct 37356808  T
Q  202 actctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||| |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||   ||||||||||| |||||||||||||||||    
T  37356807 actatattttcttataaatagagctcatttataacattgagatacacacattattgaataagaataccgttcctattctctcttcttctccttctctct 37356709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 18535257 - 18534957
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  18535257 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctccagtaaggttttaatgaggcatatcctca 18535158  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  18535157 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcata 18535058  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||||| ||||||||||||||||||||||||||  |||| ||| || |||||||||||||||| |||| ||| ||| ||||||||||||||    
T  18535057 agctactctattttcctataaatagagctcatttgtaacatt--gatatacagatcagtgaataagaatactgctccgattttctcttcttctccttctc 18534960  T
Q  298 tct 300  Q
    |||    
T  18534959 tct 18534957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 31093225 - 31092925
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31093225 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctca 31093126  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  31093125 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcata 31093026  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||| | ||||||||||||||||||||||||||  |||| | |||| ||||||||| |||||| |||||||||||| ||||||||||||||    
T  31093025 agctactctatttccctataaatagagctcatttgtaacatt--gatatatacatcagtgaataaaaatactgctcctattctctcttcttctccttctc 31092928  T
Q  298 tct 300  Q
    |||    
T  31092927 tct 31092925  T

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Target: chr1; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 3 - 300
Target Start/End: Original strand, 11660059 - 11660358
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  11660059 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttt-ctctagtaaggttttaatgaggcatatcctca 11660157  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||| ||| ||||||||||| ||||||||||||| ||||||    
T  11660158 atggacatccaagggggagtgttataaatattaatagtggatgtccaagtaacaaatgtgttagtgggccatactactatgttattgggcttaattcata 11660257  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||| | ||||||||||||||||||||||||||  |||| |||||| |||||||||||||||| ||| |||||||| ||||||||||||||    
T  11660258 agctactctatttccctataaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatactgctcatattctctcttcttctccttctc 11660355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 115 - 300
Target Start/End: Complemental strand, 37365313 - 37365127
Alignment:
Q  115 gagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttct 213  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37365313 gagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactatattttct 37365214  T
Q  214 tataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||    
T  37365213 tataaatagagctcatttgtaacattgagatacacacattattgaataagaatactgttcctattctctcttcttctccttctctct 37365127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 35625411 - 35625228
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  35625411 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactagattattgggcttagttcataagctactatattttcttat 35625312  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  35625311 aaatagagctcatttgtaacattgagatacacacattattgaataagaatactgctcctattctctcttcttctccttctctct 35625228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 38990999 - 38991244
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||| ||||| ||| |   ||||||  | ||||||| ||||||||||||||||| || ||||||||||||||||||    
T  38990999 gatattgtactctttttccttcactagattttttttcccacggggttttattttagtaag-ttttaatgaggcatatcctcgatggacatccaaggggga 38991097  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||| ||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  38991098 gtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttcccta 38991196  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    ||||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  38991197 taaatagagctcatttgtaacatt--gatacacac--tagtgaataagaata 38991244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 28519173 - 28519405
Alignment:
Q  17 gatattatactctttttccttcactagaatttttct-cctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggg 115  Q
    |||||| ||||||||||||||||||||| ||||| | || |   ||||||  | ||||||||||||||||||||||||| || |||||||||||||||||    
T  28519173 gatattgtactctttttccttcactagatttttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggg 28519272  T
Q  116 agtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 214  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | |    
T  28519273 agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccct 28519371  T
Q  215 ataaatagagctcatttgtaacattaagatacac 248  Q
    ||||||||||||||||||||||||| ||| ||||    
T  28519372 ataaatagagctcatttgtaacattgagacacac 28519405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 27347326 - 27347143
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  27347326 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgagccatactactaggttattgggcttaattcataagctactctatttccctat 27347227  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||  ||| |||||||| |||||||||||||||||    
T  27347226 aaatagagctcatttgtaacattgagatacacacatcagtgaataagaatacatctcttattctctcttcttctccttctctct 27347143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 18540864 - 18540683
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18540864 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctattttcctat 18540765  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  |||| ||| || |||||||||||||||| |||||||| ||| |||||||||||||||||    
T  18540764 aaatagagctcatttgtaacatt--gatatacagatcagtgaataagaatactgctcctattttctcttcttctccttctctct 18540683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 118 - 301
Target Start/End: Original strand, 38736039 - 38736223
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||| | || |||||| |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38736039 tgttataaatattaatagtggttgtccaaatagaaaatatgttattgggccatactattaggttattgggcttagttcataagctactctattttcttat 38736138  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctctg 301  Q
    |||||||| |||||||||||||| ||||||| |||| ||||||||| |||||| ||| |||||||| ||||||||||||||||||    
T  38736139 aaatagagttcatttgtaacattcagatacatacatcagtgaataataatactgctcatattctctcttcttctccttctctctg 38736223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 11654020 - 11654201
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||| | |||    
T  11654020 tgttataaatattaatagtggatatccaaatagcaaatgtgttagtggatcatactactatgttattgggcttaattcataagctattctatttccctat 11654119  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||| ||||||||||||||  |||| |||||| | |||||||||||||| |||||||||||| |||||||||||||||||    
T  11654120 aaatagagttcatttgtaacatt--gatatacacatcaatgaataagaatactgctcctattctctcttcttctccttctctct 11654201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 31099712 - 31099531
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  31099712 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 31099613  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  |||| | |||| ||||||||| |||||| ||| |||||||| |||||||||||||||||    
T  31099612 aaatagagctcatttgtaacatt--gatatatacatcagtgaataaaaatactgctcttattctctcttcttctccttctctct 31099531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 7876091 - 7876271
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||| | |||    
T  7876091 tgttataaatattaatagtgaatgtccaaataacaaatgtgttagtggaccatactactaggttattaggcttagttcgtaagctactatatttccctat 7876190  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||| | | | |||||||| |||||||| || |||||    
T  7876191 aaatagagctcatttgtaacattgagat--acacattagtgaataagaatatttc-cttattctctcttcttctcattttctct 7876271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 38984912 - 38985057
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||    
T  38984912 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 38985010  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  38985011 aaatagagctcatttgtaacatt--gatacacac--tagtgaataagaata 38985057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 116 - 267
Target Start/End: Original strand, 28512810 - 28512955
Alignment:
Q  116 agtgttataaatattaatagtggatatcaaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    ||||||||||||||||||| ||||| || || ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  28512810 agtgttataaatattaatattggatgtccaa-agcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttcccta 28512907  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||| ||    ||||| |||||||||||||||    
T  28512908 taaatagagctcatttgtaacattgag----acacactagtgaataagaata 28512955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 33493190 - 33493026
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  33493190 tactctttttccttcactggaatttttttcc-actgggtttttctctagtaaggttttaatgaggcatatccaagatggacatccaagggggagtgttat 33493092  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggct 188  Q
     |||||||  ||||||| | || ||||||| || ||| ||||| |||| |  ||| ||||||||||    
T  33493091 gaatattacaagtggatgtccatatagcaattgagttgttggatcatattgttagcttattgggct 33493026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 27179223 - 27179108
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  27179223 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 27179125  T
Q  124 aaatattaatagtggat 140  Q
     |||||||  |||||||    
T  27179124 gaatattacaagtggat 27179108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 29547646 - 29547753
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||||||| |||| | | ||  ||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  29547646 tactctttttccttcactagaaatttttttccatcgggtttttccatagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgttat 29547745  T
Q  124 aaatatta 131  Q
     |||||||    
T  29547746 gaatatta 29547753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 145643 - 145538
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||||||||| ||| ||| | ||||||||| ||||||||| ||| ||||||||| |  |||||||||||||||||||||||||    
T  145643 tactctttttccttcactagaatttttttcccattggatttttctctggtaaggtttcaataaggcatatcctttatggacatccaagggggagtgttat 145544  T
Q  124 aaatat 129  Q
     |||||    
T  145543 gaatat 145538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 15716530 - 15716693
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | |  ||||||||||||||||||||||||||||||||||    ||| |||||||||||||||||||||    
T  15716530 tactctttttccttcactggaattttt-tcccactgagtttttctctagtaaggttttaatgaggcatatccgagatgaacatccaagggggagtgttat 15716628  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  15716629 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 15716693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 11441944 - 11441842
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||| |||||||||| ||| |||  |||||||| |||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  11441944 tactctttttccttcattagaatttttttcc-attgagtttttctatagtaaggttttaatgaggcatatctt-gatggacatccaagggagagtgttat 11441847  T
Q  124 aaata 128  Q
     ||||    
T  11441846 gaata 11441842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 39492740 - 39492921
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || |||||||||||  |||  ||  |||||||| ||| ||||||||||||||  |||| |||||||||||   |||    
T  39492740 tgttataaatattaatagtggatgtccaaatagcaaataggtttatgagccatactaatagattattgggcttagtctataaactactctatttctctat 39492839  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||| |  |||||||||| | | ||||  | | || |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  39492840 aaataaaattcatttgtaagagtgagat--atatatcagtgaataagaatactgctcatattctctcttcttctccttctctct 39492921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 40274687 - 40274590
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||| |||||||||||||| ||||||| |  |||||||||||||||||||||||||    
T  40274687 tactctttttccttcactagaatttttttcc-attgagtttttctctaataaggttttaatgaagcatatcct-gatggacatccaagggggagtgttat 40274590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 17721623 - 17721739
Alignment:
Q  24 tactctttttccttcactagaattt-ttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtta 122  Q
    ||||||||||||||||||||||||| || |||| || | | ||||| |||||||||||||||||||| |||| || |||||||| |||||||||||||||    
T  17721623 tactctttttccttcactagaatttattttcct-ttggttatttctatagtaaggttttaatgaggcgtatcatcgatggacattcaagggggagtgtta 17721721  T
Q  123 taaatattaatagtggat 140  Q
    | |||||||  |||||||    
T  17721722 tgaatattataagtggat 17721739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 22576126 - 22576022
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||||||||| ||  ||| ||||||||||||||||| ||||||||||||||||| |  ||||| |||||||||| ||| ||||    
T  22576126 tactctttttccttcactagaattttt-tctcattgggtttttctctagtaagattttaatgaggcatatccttgatggaaatccaaggggaagtattat 22576028  T
Q  124 aaatat 129  Q
     |||||    
T  22576027 gaatat 22576022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 26028599 - 26028699
Alignment:
Q  29 tttttccttcactagaa-tttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaat 127  Q
    ||||||||| ||||||| ||||| ||| ||| | |||||||||| |||||||||||||||||| ||| |  |||||||||||||||||||| |||| |||    
T  26028599 tttttcctttactagaaatttttttcccattggatttttctctaataaggttttaatgaggcacatccttcatggacatccaagggggagtattatgaat 26028698  T
Q  128 a 128  Q
    |    
T  26028699 a 26028699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 27317501 - 27317612
Alignment:
Q  16 agatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggg 115  Q
    ||||||| |||||||||||||||||||  |||||||  |||||  ||||||   || |||||||||||||||||||||  || ||| |||| ||| ||||    
T  27317501 agatattgtactctttttccttcactaagatttttc--ctattgcgttttttcttaataaggttttaatgaggcatattctcgatgtacattcaacgggg 27317598  T
Q  116 agtgttataaatat 129  Q
    |||||||| |||||    
T  27317599 agtgttatgaatat 27317612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 16168704 - 16168777
Alignment:
Q  60 ggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaat 133  Q
    ||||||| | |||||| |||||||||||||||||| |  ||| |||||||||| |||||||||| |||| ||||    
T  16168704 ggtttttttttagtaaagttttaatgaggcatatccttgatgaacatccaaggaggagtgttatgaataataat 16168777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 15552770 - 15552874
Alignment:
Q  24 tactctttttccttcact-agaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtta 122  Q
    |||||||||||||||||| ||| |||||| |  ||| |||||||   |||||||||||||||||| |||||| |  ||||||||| |||| ||||||| |    
T  15552770 tactctttttccttcactgagattttttcac--atttggttttttcttagtaaggttttaatgagacatatcattgatggacatctaaggtggagtgtaa 15552867  T
Q  123 taaatat 129  Q
    | |||||    
T  15552868 tgaatat 15552874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 24053562 - 24053266
Alignment:
Q  3 attatcatacacaagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 102  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24053562 attatcatacacaagatattgtactctttttccttcactagaatttttctcttattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 24053463  T
Q  103 acatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagct 201  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24053462 acatctaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagct 24053363  T
Q  202 actctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctc 299  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  24053362 actctattttcttataaatagagctcatttgtaatattgagatacatacattagtgaataagaata-tgctcctattctcttttcttctccttctctc 24053266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 43287667 - 43287369
Alignment:
Q  3 attatcatacacaagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 102  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||     
T  43287667 attatcatacacaagatattgcactcttttttcttcactagaatttttctcctattagatttttctctattaaggttttaatgaggcatatcctcaatga 43287568  T
Q  103 acatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagct 201  Q
    |||||||||||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43287567 acatccaaggggaagtgttataaacattaatagtagatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagct 43287468  T
Q  202 actctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  43287467 actctattttcttataaatagagctcatttgtaacattgagatacacacattagtgaataagaatactgctcctattctctcttcttcttcttctctct 43287369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 19437814 - 19437515
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19437814 attatcatacacaaaagggatattgtactctttt-ccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 19437716  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  19437715 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcata 19437616  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||| | ||||||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  19437615 agctactctatttccctataaatagagctcatttgtaacatt--gagacacacattagtgaataagaatactgctcttattctctcttcttctccttctc 19437518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 25445336 - 25445037
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25445336 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctca 25445237  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    ||||||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  25445236 atggacatctaa-ggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttaatgggccatactactaggttattgggcttaattcata 25445138  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  25445137 agctactctatttccctataaatagagctcatttgtaacatt--gatacacacatcagtgaataagaatactcctcctattctctcttcttctccttctc 25445040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 43293297 - 43293114
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43293297 tgttataaacattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 43293198  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  43293197 aaatagagctcatttgtaacattgggatacacacatcagtgaataagaatactgctcctattctctcttcttctccttctctct 43293114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 116 - 299
Target Start/End: Complemental strand, 24056784 - 24056601
Alignment:
Q  116 agtgttataaatattaatagtggatatcaa-atagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 214  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24056784 agtgttataaatattaatagtggatgtccagatagcaaatgtgttattgg-ccatactactaggttattggacttagttcataagctactctattttctt 24056686  T
Q  215 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctc 299  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  24056685 ataaatagagctcatttgtaacattgagatacacacattagtgaataagaatactgcttctattctcttttcttctccttctctc 24056601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 19443271 - 19443090
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  19443271 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctattttcctat 19443172  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  19443171 aaatagagctcatttgtaacatt--gagacacacattagtgaataagaatactgctcttattctctcttcttctccttctctct 19443090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 25454876 - 25454699
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    |||||||||||||||||||| || || ||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||| | |||    
T  25454876 tgttataaatattaatagtgaatgtccaaatagcaaatgtgttagtgggccatactactaggttattgagcttaattcataagctactctatttccctat 25454777  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  ||||||||||| | |||||||||||||| |||||||||    |||||||||||||||||    
T  25454776 aaatagagctcatttgtaacatt--gatacacacatcattgaataagaatactgctcctattc----ttcttctccttctctct 25454699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 5836339 - 5836224
Alignment:
Q  15 aagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggg 114  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5836339 aagatattgtactctttttccttcactaaaattttt-tcctattgagtttttctctagtaaggttttaatgaggcatatcctcgatggacatccaagggg 5836241  T
Q  115 gagtgttataaatatta 131  Q
    ||||||||| |||||||    
T  5836240 gagtgttatgaatatta 5836224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 31437151 - 31437273
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||| | |||||| |||| ||||||||| ||||  ||||||||||||||||||||||||||||||||||| |||    
T  31437151 tgttataaatattaatagtggatgtccaaacaacaaatgagttaatggaccataatactgtgttattgggcttagttcataagctactctattttcctat 31437250  T
Q  217 aaatagagctcatttgtaacatt 239  Q
    ||||| || ||||||||||||||    
T  31437251 aaataaagttcatttgtaacatt 31437273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 22430254 - 22430417
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  22430254 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 22430352  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  22430353 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 22430417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 22435848 - 22436011
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  22435848 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 22435946  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  22435947 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 22436011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 43776891 - 43777060
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| |||||||||||||||||| ||||||||| |  | | |||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  43776891 gatattgtactctttttccttcactggaatttttccc--actgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaaggggga 43776988  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
    ||||||| |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  43776989 gtgttatgaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 43777060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 636188 - 636303
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  636188 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 636286  T
Q  124 aaatattaatagtggat 140  Q
     |||||||  |||||||    
T  636287 gaatattacaagtggat 636303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 19089369 - 19089472
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||| |||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  19089369 tactcttttttcttcactagaatttttttcc-atcgggtttttctctagtaaggttttaatgaggcatatctttcatggacatccaagagggagtgttat 19089467  T
Q  124 aaata 128  Q
     ||||    
T  19089468 gaata 19089472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 25231889 - 25231996
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||| ||||||||||||||||||||| ||  ||  |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||    
T  25231889 tactcattttccttcactagaatttttttctcatcgggtttttctctagtaaggttttaatgaggcatatctttgatggatatccaagggggaatgttat 25231988  T
Q  124 aaatatta 131  Q
     |||||||    
T  25231989 gaatatta 25231996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 1525548 - 1525696
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | |||||||||||| |||||| |||||||||||||||||    |||||||||||||||||||||||||    
T  1525548 tactctttttccttcactggaattttt-tcccactaggtttttctccagtaagattttaatgaggcatatccgagatggacatccaagggggagtgttat 1525646  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatact 172  Q
     |||||||  ||||||| | || |||| || || ||||||||| ||||||    
T  1525647 gaatattataagtggatgtccatatagaaattgggttattggatcatact 1525696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 7910216 - 7910101
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||| ||||||    |||||||||||||||||||||||||    
T  7910216 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgagacatatccgagatggacatccaagggggagtgttat 7910118  T
Q  124 aaatattaatagtggat 140  Q
     |||||||  |||||||    
T  7910117 gaatattacaagtggat 7910101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 19912169 - 19912272
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||| |||||||||||||| | | ||| ||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  19912169 tactctttttccatcactagaattttttttccattgggtttttctataggaaggttttaatgaggcatatcct-aatggacatccaagggggagtgttat 19912267  T
Q  124 aaata 128  Q
     ||||    
T  19912268 gaata 19912272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 14898689 - 14898795
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | ||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||    
T  14898689 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatattcgagatggacatccaagggggagtgttat 14898787  T
Q  124 aaatatta 131  Q
     |||||||    
T  14898788 gaatatta 14898795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 17319769 - 17319660
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||| |||||||||||||||||||||| ||| |    |||||||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||||||    
T  17319769 tactatttttccttcactagaatttttttcccaccgagtttttctctagcaaggttttaattaggcatatccttgatggacatccaagggggagtgttat 17319670  T
Q  124 aaatattaat 133  Q
     |||| ||||    
T  17319669 gaataataat 17319660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 11311954 - 11312058
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||| |||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||| |   |||||||||||| | || ||||||    
T  11311954 tactttttttccttcactagaatttttttcctattggatttttctctagtaaggttttaatgaggcacatccttcgtggacatccaagagagaatgttat 11312053  T
Q  124 aaata 128  Q
     ||||    
T  11312054 gaata 11312058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 31433045 - 31433167
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || |||||||||||  |||| |||| ||| | ||||| |||||| |||||||||||||| || ||||||| | |||    
T  31433045 tgttataaatattaatagtggatgtccaaatagcaaattagttaatggagcatgcaactagtttattgagcttagttcataagatattctatttccctat 31433144  T
Q  217 aaatagagctcatttgtaacatt 239  Q
    |||||  | ||||||||||||||    
T  31433145 aaataatgttcatttgtaacatt 31433167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 7385108 - 7385002
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcata--tcttcaatggacatccaagggggagtgtt 121  Q
    ||||||||||||||||||||||||||| ||  |||  |||||| |||||||| |||||||||||||| |  || |  |||||||||||||||||||||||    
T  7385108 tactctttttccttcactagaatttttttctcattgagtttttttctagtaatgttttaatgaggcacacatccttcatggacatccaagggggagtgtt 7385009  T
Q  122 ataaata 128  Q
    || ||||    
T  7385008 atgaata 7385002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 16443578 - 16443472
Alignment:
Q  29 tttttccttcactagaatttttctcctattaggtttttctctagtaa-ggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaat 127  Q
    |||||||||||||| | ||||| ||| |   | |||||||||||||| |||||||||||| ||||||||  ||||||||||||||||||||||||| |||    
T  16443578 tttttccttcactaaattttttttcccaccggatttttctctagtaaaggttttaatgagacatatctttcatggacatccaagggggagtgttatgaat 16443479  T
Q  128 attaata 134  Q
    | |||||    
T  16443478 aataata 16443472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 34111248 - 34111139
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||| ||||||| ||||||| | | || || ||||| |||||||| |||||||||||||||||| |  ||||||||| || |||||    
T  34111248 gatattgtactctttttcattcactataattttttttcaataagtttttt-tctagtaaagttttaatgaggcatatcct-gatggacatcgaaagggga 34111151  T
Q  117 gtgttataaata 128  Q
    ||||||| ||||    
T  34111150 gtgttatgaata 34111139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 21289799 - 21289730
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatc 94  Q
    |||||||||||||||||| |||||||| ||| ||| | ||||||| | ||||||||||||||||| |||||    
T  21289799 tactctttttccttcactggaattttt-tcccattggatttttctatggtaaggttttaatgaggtatatc 21289730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 8872289 - 8872362
Alignment:
Q  166 ccatactactaggttattgggcttagttcataagctactctattttcttataaatagagctcatttgtaacatt 239  Q
    |||||||| | | ||||||||||||||  ||| |||||| ||||| | ||||||||||| ||||||||||||||    
T  8872289 ccatactatttgattattgggcttagtctataggctactatatttccctataaatagagttcatttgtaacatt 8872362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 5836213 - 5836153
Alignment:
Q  157 gttattggaccatactactaggttattgggcttagttcataagctactctattttcttata 217  Q
    |||| ||||||||| ||||||  |||| |||||||| |||||| |||||||||||| ||||    
T  5836213 gttaatggaccatattactagactattaggcttagtccataagatactctattttcctata 5836153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 26539026 - 26538914
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagt-aaggttttaatgaggcatatcttcaatggacatccaaggggg 115  Q
    |||||| |||||||||||||| ||||  |||||| |||  || | |||||   |||| |||||||||||||| |||||| |  |||||||||||| |||     
T  26539026 gatattgtactctttttccttgactaagatttttttcccttttgattttttcttagtaaaggttttaatgagacatatccttcatggacatccaaaggga 26538927  T
Q  116 agtgttataaata 128  Q
    |||||||| ||||    
T  26538926 agtgttatgaata 26538914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 218; Significance: 1e-120; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 3 - 300
Target Start/End: Original strand, 111756 - 112058
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  111756 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctca 111855  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||||||| |||||||||||||||| ||||||    
T  111856 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcata 111955  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
     |||||||||||| | ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  111956 ggctactctatttccctataaatagagttcatttgtaacattgagatacacacatcagtgaataagaatactgctcctattctctcttcttctccttctc 112055  T
Q  298 tct 300  Q
    |||    
T  112056 tct 112058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 106130 - 106175
Alignment:
Q  255 gtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  106130 gtgaataagaatactgctcctattctctcttcttctccttctctct 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 23053656 - 23053357
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23053656 attatcatacacaaaagggatattgtactctttt-ccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 23053558  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||    
T  23053557 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgagcttaattcata 23053458  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||| | ||||||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  23053457 agctactctatttccctataaatagagctcatttgtaacatt--gagacacacattagtgaataagaatactgctcttattctctcttcttctccttctc 23053360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 35264818 - 35264518
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||    
T  35264818 attatcatacacaaaaaggatattgtactctttttccttcactagaatttttcttccattaggtttttctctagtaaggttttaatgaggcatatcctca 35264719  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||||||| |||||||||||||||| ||||||    
T  35264718 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcata 35264619  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
     |||||||||||| | |||||||||||||||||||||||||| ||||  |||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  35264618 ggctactctatttccctataaatagagctcatttgtaacattgagat--acacatcagtgaataagaatactgctcctattctctcttcttctccttctc 35264521  T
Q  298 tct 300  Q
    |||    
T  35264520 tct 35264518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 269
Target Start/End: Complemental strand, 21171465 - 21171196
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21171465 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctca 21171366  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  21171365 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatggcaaatgtgttagtgggccatactactaggttattgggcttaattcata 21171266  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatact 269  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  21171265 agctactctatttccctataaatagagctcatttgtaacattgagat--acacataagtgaataagaatact 21171196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 3 - 269
Target Start/End: Original strand, 16675445 - 16675711
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16675445 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctca 16675544  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| ||| |||||||||||||   ||||||||| ||||||    
T  16675545 atggacatccaagggggagtgttataaatattaatagtgaatgtccaaatagcaaatgtgttagtgggccatactactagg---ttgggcttaattcata 16675641  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatact 269  Q
    ||||||| ||||| | |||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  16675642 agctactatatttccctataaatagagctcatttgtaacattgagat--acacataagtgaataagaatact 16675711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 291
Target Start/End: Complemental strand, 25365654 - 25365378
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||| ||||| ||  |   ||||||  | ||||||||||||||||||||||||| || ||||||||||||||||||    
T  25365654 gatattgtactctttttccttcactagattttttttcgcacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggga 25365555  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25365554 gtgttataaatattaatagtggatgttcaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttccta 25365455  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattcttctc 291  Q
    ||||||||||||||||||||||||   | ||||||||||||||||||||||| | |||| |||||||| ||||||||    
T  25365454 taaatagagctcatttgtaacattgtaaaacacacattagtgaataagaatatttctccttattctctcttcttctc 25365378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 23059113 - 23058932
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  23059113 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 23059014  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  23059013 aaatagagctcatttgtaacatt--gagacacacattagtgaataagaatactgctcttattctctcttcttctccttctctct 23058932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 35270440 - 35270259
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||| |||||||||||| | |||    
T  35270440 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactctatttccctat 35270341  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| ||||  |||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  35270340 aaatagagctcatttgtaacattgagat--acacatcagtgaataagaatactgctcctattctctcttcttctccttctctct 35270259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 39654086 - 39653905
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  39654086 tgttataaatattaatagtggatgtccaaataacaaatgtgttagtggaccatactactaggttattgggcttaattcataagctactatatttccttat 39653987  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||| |||||||  |||| |||||| |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  39653986 aaatagagctcatttataacatt--gatatacacatcagtgaataagaatactgctcttattctctcttcttctccttctctct 39653905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 116 - 300
Target Start/End: Complemental strand, 21178211 - 21178025
Alignment:
Q  116 agtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactc--tattttc 212  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  21178211 agtgttataaatattaatagtggatgttcaaatggcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatattttc 21178112  T
Q  213 ttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactc-ctattctctattcttctccttctctct 300  Q
     |||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||  || ||| | ||| |||||||||||||||||    
T  21178111 ctataaatagagctcatttgtaacattgagat--acacataagtgaataagaatacttttctctagtatctcttcttctccttctctct 21178025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 28367234 - 28367071
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  28367234 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 28367136  T
Q  124 aaatattaatagtggatatcaa-atagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| |||| ||||||| || ||||||||| |||| |  ||| |||||||||    
T  28367135 gaatattacaagtggatgtcaatatagcaattgagttattggatcatattgttagcttattgggc 28367071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 24213569 - 24213462
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||||||||| ||| ||  || |||||||||||||||||||||||||||||||| || || |||||||||||||||||||||     
T  24213569 tactctttttccttcactagaatttttttcccatcgggattttctctagtaaggttttaatgaggcatatcctcgatagacatccaagggggagtgttaa 24213470  T
Q  124 aaatatta 131  Q
     |||||||    
T  24213469 gaatatta 24213462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 170
Target Start/End: Complemental strand, 30957850 - 30957704
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | ||||||||||| ||||||| |||||||||||||||    |||||||||||||||||||||||||    
T  30957850 tactctttttccttcactggaattttt-tcccactgggtttttctctcgtaaggtattaatgaggcatatccgagatggacatccaagggggagtgttat 30957752  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccata 170  Q
     |||||||  ||||||| | || ||||||| || ||||||||| ||||    
T  30957751 gaatattacaagtggatgtccatatagcaattgggttattggatcata 30957704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 17945654 - 17945758
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||| ||||| | | |||  |||||||||||||||||||||||||||||| ||| |  |||||||||||||| ||||||||||    
T  17945654 tactctttttccttcactagatttttttttccattgagtttttctctagtaaggttttaatgaggcacatccttcatggacatccaaggaggagtgttat 17945753  T
Q  124 aaata 128  Q
     ||||    
T  17945754 gaata 17945758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 34648179 - 34648068
Alignment:
Q  28 ctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaat 127  Q
    |||||||||||| || | ||||| ||| ||| ||||||||||||| ||||||||||||||||||||| |  ||||||||||||||||||| ||||| |||    
T  34648179 ctttttccttcaataaattttttttcc-attgggtttttctctagaaaggttttaatgaggcatatccttgatggacatccaagggggagagttatgaat 34648081  T
Q  128 attaatagtggat 140  Q
    ||||  |||||||    
T  34648080 attataagtggat 34648068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 18080207 - 18080100
Alignment:
Q  24 tactctttttccttcactagaatttttct--cctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtt 121  Q
    |||||||||||||||| | |||||||| |  ||  || |||||| |||||||||||||||||||||||||||| |  ||||||||||||||| || ||||    
T  18080207 tactctttttccttcattggaatttttttttcccgttgggttttactctagtaaggttttaatgaggcatatccttgatggacatccaagggagaatgtt 18080108  T
Q  122 ataaatat 129  Q
    || |||||    
T  18080107 atgaatat 18080100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 17604572 - 17604682
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| || |||||||||||||||||||||||| |||  | || ||||| |||||||| |||||||||||||||||| |   ||||||| ||| |||||    
T  17604572 gatattgtattctttttccttcactagaatttttttccattcagttttttttctagtaaagttttaatgaggcatatcat-gttggacatgcaaagggga 17604670  T
Q  117 gtgttataaata 128  Q
    ||||||| ||||    
T  17604671 gtgttatgaata 17604682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 19699251 - 19699353
Alignment:
Q  27 tctttttccttcactagaatttttctc-ctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataa 125  Q
    |||||||||||  ||||||||||| |  | ||| ||||||||||||||||||||||||||||||| ||| |  |||||||| ||||||||| |||||| |    
T  19699251 tctttttcctttgctagaatttttttttccattgggtttttctctagtaaggttttaatgaggcacatccttcatggacattcaagggggactgttatga 19699350  T
Q  126 ata 128  Q
    |||    
T  19699351 ata 19699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 19479777 - 19479672
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| || ||||||||||| | ||| |||||| |  |||| ||||||| ||||||||||||||| ||||||||||| |  |||||||||||||| | |    
T  19479777 gatattttattctttttccttgagtaggattttttttttattgggtttttttctagtaaggttttagtgaggcatatcct-gatggacatccaaggagaa 19479679  T
Q  117 gtgttat 123  Q
    |||||||    
T  19479678 gtgttat 19479672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 19780243 - 19780183
Alignment:
Q  62 tttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||| | ||||| ||||||||||||||||||  | |||||||||||||||||||||||||    
T  19780243 tttttcccaagtaaagttttaatgaggcatatcc-cgatggacatccaagggggagtgttat 19780183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 12026515 - 12026447
Alignment:
Q  60 ggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaata 128  Q
    ||||||||||||||||||||||||||| ||||||| |  ||| | |||||| || ||||||||| ||||    
T  12026515 ggtttttctctagtaaggttttaatgaagcatatccttgatgaatatccaatggagagtgttatgaata 12026447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 21575161 - 21575096
Alignment:
Q  62 tttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaata 128  Q
    ||||| || ||||||||||||| || ||||||| | | ||||||||||| |||||||||||||||||    
T  21575161 tttttttccagtaaggttttaacgaagcatatcgtga-tggacatccaatggggagtgttataaata 21575096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 22231093 - 22231016
Alignment:
Q  16 agatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatc 94  Q
    ||||||| ||||||||||||||||||| |  |||||||| ||| |||||||   |||||||| ||||| ||||||||||    
T  22231093 agatattgtactctttttccttcacta-atattttctcccattgggttttttcttagtaagggtttaacgaggcatatc 22231016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 2135902 - 2135850
Alignment:
Q  184 gggcttagttcataagctactctattttcttataaatagagctcatttgtaac 236  Q
    |||||||||  ||||| || ||||||| | |||||||||||||||||||||||    
T  2135902 gggcttagtctataagttaatctatttccatataaatagagctcatttgtaac 2135850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 340571 - 340269
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  340571 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctaataaggttttaatgaggcatatcctca 340472  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  340471 atggacatccaagggggagtgttataaatattaatagcggatgtccaaataacaaatgtgttattgagccatactactaggttattgggcttagttcata 340372  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||| | |||||||||||| ||||||||  ||||    
T  340371 agctactctattttcttataaatagagctcatttgtaacattgggatacacacatcagtgaataggaatatttctcctattctctcttcttctctctctc 340272  T
Q  298 tct 300  Q
    |||    
T  340271 tct 340269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 300
Target Start/End: Original strand, 8247991 - 8248292
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttca 98  Q
    ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8247991 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctca 8248090  T
Q  99 atggacatccaagggggagtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||| |||||| ||||| |||||| ||||||    
T  8248091 atggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatattactagattattaggcttaattcata 8248190  T
Q  198 agctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactc-ctattctctattcttctccttct 296  Q
    ||||||||||||||| |||||||||||||||||||||||||| || |  |||  | ||||||||||||||||  || ||| | ||| |||||||||||||    
T  8248191 agctactctattttcctataaatagagctcatttgtaacattgagtt--acatctaagtgaataagaatacttttctctagtatctcttcttctccttct 8248288  T
Q  297 ctct 300  Q
    ||||    
T  8248289 ctct 8248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 29185424 - 29185704
Alignment:
Q  17 gatattatactctttttccttcactagaatttttct-cctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggg 115  Q
    |||||| ||||||||||||||||||||||||||| | || |   ||||||  | ||||||||||||||||||||||||| || |||||||||||||||||    
T  29185424 gatattgtactctttttccttcactagaattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggg 29185523  T
Q  116 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 214  Q
    ||||||||   |||||||| ||||| || |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | |    
T  29185524 agtgttat---tattaatattggatgtccaaatagaaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttccct 29185620  T
Q  215 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||    
T  29185621 ataaatagagctcatttgtaacatt--gatacacacattagtgaataagaatactgcttctattctttcttcttctccttctctct 29185704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 29176544 - 29176725
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||| | |||    
T  29176544 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggtcatactactaggttattgggcttagttcataagctactctatttccctat 29176643  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||    
T  29176644 aaatagagctcatttgtaacatt--gatacacacattagtgaataagaatactgcttctattctttcttcttctccttctctct 29176725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 118 - 282
Target Start/End: Complemental strand, 346686 - 346521
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  346686 tgttataaatattaatagcggatgtccaaatagcaaatgtgttattgagccatactactaggttattgagcttagttcataagctactctattttcttat 346587  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctct 282  Q
    |||||||||||||||||||||||  ||||||||||| |||||||| ||||| | ||||||||||||    
T  346586 aaatagagctcatttgtaacattgggatacacacatcagtgaataggaatatttctcctattctct 346521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 290
Target Start/End: Complemental strand, 25830647 - 25830376
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||||||||| |   ||| ||||||  | |||||||||||||| |||||||||| || |||||||| ||||||| |    
T  25830647 gatattgtactctttttccttcactagaatttttttttcattgggttttattttagtaaggttttaacgaggcatatcctcgatggacattcaagggg-a 25830549  T
Q  117 gtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||||||||| || |||||||||||  |||| ||| | || ||||||| || ||||||||||| ||||||||| | ||||| | ||    
T  25830548 gtgttataaatattaatagtggatgtccaaatagcaaattggttaatgggctat-ctactagattgttgggcttagtccataagctattatatttcccta 25830450  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattcttct 290  Q
    |||||||||||| |||||| |||| ||  ||||||   |||||||||||||||| |||| |||||||| |||||||    
T  25830449 taaatagagctcctttgtagcattgagggacacac--cagtgaataagaatacttctccttattctctcttcttct 25830376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 116 - 267
Target Start/End: Original strand, 22822535 - 22822684
Alignment:
Q  116 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 214  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |    
T  22822535 agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccct 22822633  T
Q  215 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  22822634 ataaatagagctcatttgtaacatt--gatacacacatcagtgaataagaata 22822684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 22826840 - 22826987
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |||    
T  22826840 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccctat 22826938  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  22826939 aaatagagctcatttgtaacatt--gatacacacatcagtgaataagaata 22826987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 25498961 - 25499121
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  25498961 tactctttttccttcactagaattttt-tcc-attgggtttttctctagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgttat 25499058  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgg 185  Q
     |||||||  ||||||| | || ||||||| |  ||||||||  ||||||| ||| |||||||    
T  25499059 gaatattataagtggatgtccatatagcaattaggttattgggtcatactattagcttattgg 25499121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 8242541 - 8242723
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||  |||| |||||| ||||| |||||| ||||||||||||||||||| | |||    
T  8242541 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggtcatattactagattattaggcttaattcataagctactctatttccctat 8242640  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactc-ctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| || |  |||  | ||||||||||||||||  || ||| | ||| |||||||||||||||||    
T  8242641 aaatagagctcatttgtaacattgagtt--acatctaagtgaataagaatacttttctctagtatctcttcttctccttctctct 8242723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 558125 - 558010
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  558125 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgttat 558027  T
Q  124 aaatattaatagtggat 140  Q
     |||||||  |||||||    
T  558026 gaatattataagtggat 558010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 16648329 - 16648492
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||| ||||||    
T  16648329 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgagacatatccgaaatggacatccaagggggaatgttat 16648427  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  16648428 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 16648492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 17622690 - 17622853
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||| ||||||    
T  17622690 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgagacatatccgaaatggacatccaagggggaatgttat 17622788  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  17622789 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 17622853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 32148383 - 32148498
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||| | |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  32148383 tactctttttccttcattggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 32148481  T
Q  124 aaatattaatagtggat 140  Q
     |||||||  |||||||    
T  32148482 gaatattacaagtggat 32148498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 42208799 - 42208945
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||  ||||||| ||| | | | |||||||||||||||||||||||||||||| ||     ||||||||||||||||||||||||    
T  42208799 tactctttttccttcactgaaattttt-tcccactggatttttctctagtaaggttttaatgaggcatgtccgaggtggacatccaagggggagtgttat 42208897  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccata 170  Q
     |||||||  ||||||| | || ||||||| || ||||||||| ||||    
T  42208898 gaatattacaagtggatgtccatatagcaattgggttattggatcata 42208945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 7578428 - 7578528
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||| |||||| || ||||| ||| ||| ||||||||||||||||| ||||||| |||||||||  | |||||||||||||||||||||||||    
T  7578428 tactctttttcattcact-gattttttttcc-attgggtttttctctagtaagattttaataaggcatatc--ctatggacatccaagggggagtgttat 7578523  T
Q  124 aaata 128  Q
     ||||    
T  7578524 gaata 7578528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 34326201 - 34326307
Alignment:
Q  24 tactctttttccttcactagaatttttct--cctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtt 121  Q
    |||||||||||||||||| |||||||| |  ||  || |||||| |||||||||||||||||||||||||||| | |||||| |||||| | ||||||||    
T  34326201 tactctttttccttcact-gaatttttttttcccgttgggttttactctagtaaggttttaatgaggcatatccttaatggatatccaatgaggagtgtt 34326299  T
Q  122 ataaatat 129  Q
    || |||||    
T  34326300 atgaatat 34326307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 42162508 - 42162393
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||  ||||||| ||| | | ||||||| ||||||||||||||||| |||||||||    || ||||||||||||| ||||||||    
T  42162508 tactctttttccttcactgaaatttttttcccactgggtttttatctagtaaggttttaat-aggcatatccaagattgacatccaaggggaagtgttat 42162410  T
Q  124 aaatattaatagtggat 140  Q
     |||||||  |||||||    
T  42162409 gaatattacaagtggat 42162393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 14719619 - 14719509
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| || |||||||||||||||||||||||| |||  | || ||||| |||||||| |||||||||||||||||| |   ||||||| ||| |||||    
T  14719619 gatattgtattctttttccttcactagaatttttttccattgagttttttttctagtaaagttttaatgaggcatatcat-gttggacatgcaaagggga 14719521  T
Q  117 gtgttataaata 128  Q
    ||||||| ||||    
T  14719520 gtgttatgaata 14719509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 20125218 - 20125277
Alignment:
Q  70 tagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatat 129  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||    
T  20125218 tagtaaggttttaacgaggcatatctttgatggacatccaagggggagtgttatgaatat 20125277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 20362548 - 20362655
Alignment:
Q  17 gatattatactctttttccttcacta-gaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggg 115  Q
    |||||| |||||||||| |||||||| || ||||| | | ||| ||||||||  |||||||||||||||||||||||||    ||||||||||||  |||    
T  20362548 gatattgtactcttttttcttcactaagatttttttttccattgggtttttccttagtaaggttttaatgaggcatatccatgatggacatccaaaaggg 20362647  T
Q  116 agtgttat 123  Q
    ||||||||    
T  20362648 agtgttat 20362655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 23818935 - 23818864
Alignment:
Q  60 ggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatatta 131  Q
    |||||||||||||||| |||||||||||||||||| || |||||||||||| | | | |||||| |||||||    
T  23818935 ggtttttctctagtaatgttttaatgaggcatatcctcgatggacatccaatgagaaatgttatgaatatta 23818864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 26457099 - 26456985
Alignment:
Q  25 actctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttata 124  Q
    |||||||||| |||||||||||||||  ||  | || |||||||||| ||||||||||||||  |||||| || ||||||||||||||  || ||||||     
T  26457099 actctttttc-ttcactagaattttttaccattgagttttttctctaataaggttttaatgaatcatatcctcgatggacatccaaggaagaatgttatg 26457001  T
Q  125 aatattaatagtggat 140  Q
    |||||||  |||||||    
T  26457000 aatattataagtggat 26456985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 2068882 - 2068797
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagcta 202  Q
    ||||||||||||||||||||||| || |||||||||||| |||| | | | |||||| ||| | |||||||||||| |||||||||    
T  2068882 tgttataaatattaatagtggatgtccaaatagcaaatgagttaataggctatactaatagatgattgggcttagtccataagcta 2068797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 14997702 - 14997607
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggg 113  Q
    |||||| |||||||||||| |||||   |||||| ||| |||||||||||   |||||| |||||||||||| ||||| || ||| |||||||||||    
T  14997702 gatattgtactctttttccctcactgagattttt-tcccattaggttttttcttagtaaagttttaatgaggtatatcctcgatgtacatccaaggg 14997607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 22477247 - 22477177
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatct 95  Q
    ||||||||||| ||||||||||||||| | | || || |||||||||| |||| |||||||||| |||||||    
T  22477247 tactctttttctttcactagaattttt-ttcaatcagatttttctctaataagattttaatgagacatatct 22477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 13924 - 14203
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13924 gatattgtactctttttccttcactagaatttttctcctattagatttttctctagtaaggttttaatgaggcatatcctcaatggacatccaaggggga 14023  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||||| | ||    
T  14024 gtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgagccatactactaggttattgagcttagttcataagctactctatttcccta 14123  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctc 297  Q
    ||||||||||||||||||||||||  || | |||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  14124 taaatagagctcatttgtaacatt--gagagacacatcagtgaataagaatactgctcctattctctcttcttctccttctc 14203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 30714494 - 30714193
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttt-tctctagtaaggttttaatgaggcatatcttc 97  Q
    ||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||    
T  30714494 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggttttctctatagtaaggttttaatgaggcatatcctc 30714395  T
Q  98 aatggacatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||    
T  30714394 aatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaattgtgttagtgggccatactactaggttattgggcttaattcat 30714295  T
Q  197 aagctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttct 296  Q
    |||||||||||||| | ||||||||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||| |||||||| ||||    
T  30714294 aagctactctatttccctataaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatactgctcctattctctcttcttctcattct 30714197  T
Q  297 ctct 300  Q
    ||||    
T  30714196 ctct 30714193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 300
Target Start/End: Complemental strand, 30722271 - 30721970
Alignment:
Q  3 attatcatacacaa----gatattatactctttttccttcactagaatttttctcctattaggtttt-tctctagtaaggttttaatgaggcatatcttc 97  Q
    ||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||    
T  30722271 attatcatacacaaaagggatattgtactctttttccttcactagaatttttctcctattaggttttctctatagtaaggttttaatgaggcatatcctc 30722172  T
Q  98 aatggacatccaagggggagtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||    
T  30722171 aatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaattgtgttagtgggccatactactaggttattgggcttaattcat 30722072  T
Q  197 aagctactctattttcttataaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttct 296  Q
    |||||||||||||| | ||||||||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||| |||||||| ||||    
T  30722071 aagctactctatttccctataaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatactgctcctattctctcttcttctcattct 30721974  T
Q  297 ctct 300  Q
    ||||    
T  30721973 ctct 30721970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 21247575 - 21247821
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||| ||||| ||| |   ||||||  | ||||||||||||||||||||||||| || ||||||||||||||||||    
T  21247575 gatattgtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggga 21247674  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  21247675 gtgttataaatattaatattggatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactctatttcccta 21247773  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    ||||||||||||||||||||||||  |||||| ||  |||||||||||||||    
T  21247774 taaatagagctcatttgtaacatt--gatacagac--tagtgaataagaata 21247821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 37209610 - 37209859
Alignment:
Q  17 gatattatactctttttccttcactagaatttttct-cctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggg 115  Q
    |||||| ||||||||||||||||||||||||||| | || |   ||||||  | ||||||||||||||||||||||||| || |||||||||||||||||    
T  37209610 gatattgtactctttttccttcactagaattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggg 37209709  T
Q  116 agtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 214  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |    
T  37209710 agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccct 37209808  T
Q  215 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  37209809 ataaatagagctcatttgtaacatt--gatacacacatcagtgaataagaata 37209859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 27679884 - 27679662
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||| ||||| ||| |   ||||||  | ||||||||||||||||||||||||| || ||||||||||||||||||    
T  27679884 gatattgtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggga 27679785  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||| ||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  27679784 gtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttcccta 27679686  T
Q  216 taaatagagctcatttgtaacatt 239  Q
    ||||||||||| ||||||||||||    
T  27679685 taaatagagctaatttgtaacatt 27679662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 30727759 - 30727578
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||||| ||     
T  30727759 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactatattttcctaa 30727660  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  30727659 aaatagagctcatttgtaacatt--gatatacacatcagtgaataagaatactgctcctattctctcttcttctcattctctct 30727578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 26196802 - 26197002
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||||||||||||  |||||| || | | | ||||  | ||||||||| |||||||| |||||| ||||||||||| |||||||| |||||||    
T  26196802 tactctttttccttcactagtttttttcccccactggtttttattttagtaaggtcttaatgagacatatcctcaatggacattcaagggggggtgttat 26196901  T
Q  124 aaatattaatagtggat-atcaaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataaatag 222  Q
    |||||||||||||||||  |||||||||||||  |||  ||| |||||||| |||||||||||||||||||||||||||||||||||| | |||||||||    
T  26196902 aaatattaatagtggatgttcaaatagcaaataggtttatgggccatactaataggttattgggcttagttcataagctactctatttccctataaatag 26197001  T
Q  223 a 223  Q
    |    
T  26197002 a 26197002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 116 - 267
Target Start/End: Original strand, 37204233 - 37204382
Alignment:
Q  116 agtgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctt 214  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |    
T  37204233 agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccct 37204331  T
Q  215 ataaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  37204332 ataaatagagctcatttgtaacatt--gatacacacatcagtgaataagaata 37204382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 21241172 - 21241317
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | |||    
T  21241172 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactctatttccctat 21241270  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||  |||||| ||  |||||||||||||||    
T  21241271 aaatagagctcatttgtaacatt--gatacagac--tagtgaataagaata 21241317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 27683565 - 27683444
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||||||||| | |||    
T  27683565 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggtttagttcataagttactctatttccctat 27683467  T
Q  217 aaatagagctcatttgtaacatt 239  Q
    |||||||||||||||||||||||    
T  27683466 aaatagagctcatttgtaacatt 27683444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 143 - 300
Target Start/End: Complemental strand, 24042987 - 24042835
Alignment:
Q  143 caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataaatagagctcatttgtaacattaag 242  Q
    |||||| ||||||||||| ||| ||||| || ||| ||||||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||     
T  24042987 caaataacaaatgtgttaatgggccataatattagattattgggcttagttcataagctactctatttctctataaatagagctcatatgtaacattaaa 24042888  T
Q  243 atacacacattagtgaataagaatactactcc-tattctctattcttctccttctctct 300  Q
    |||||||      |||||||||||| | |||| | |||||| ||||||| |||||||||    
T  24042887 atacaca------tgaataagaatatttctccttgttctcttttcttcttcttctctct 24042835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 17909654 - 17909756
Alignment:
Q  26 ctctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataa 125  Q
    ||||||||||||||||||||||||| |   ||| ||||||||||||||||||||||||||||||| ||| |  |||||||||||||| |||||||||| |    
T  17909654 ctctttttccttcactagaatttttttttcattgggtttttctctagtaaggttttaatgaggcacatccttcatggacatccaaggaggagtgttatga 17909753  T
Q  126 ata 128  Q
    |||    
T  17909754 ata 17909756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 23429438 - 23429544
Alignment:
Q  24 tactctttttccttcactagaatttttct-cctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtta 122  Q
    ||||||||||||||||||  ||||||| | || ||| |||||| |||||||||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  23429438 tactctttttccttcactgtaattttttttcccattgggttttactctagtaaggttttaatgagggatatccttgatggacatccaagggggagtgtta 23429537  T
Q  123 taaatat 129  Q
    | |||||    
T  23429538 tgaatat 23429544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 41048765 - 41048880
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | ||||||||||||||||||||||||| |||||||||    |||| ||||||||||| ||||||||    
T  41048765 tactctttttccttcactggaatttttttcccactgggtttttctctagtaaggttttaat-aggcatatccgagatgggcatccaaggggaagtgttat 41048863  T
Q  124 aaatattaatagtggat 140  Q
     |||||||  |||||||    
T  41048864 gaatattacaagtggat 41048880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 10738873 - 10738978
Alignment:
Q  24 tactctttttccttcactaga-atttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtta 122  Q
    ||||||||||||||||||| | |||||| | | ||| |||||||||||| |||||||||||||||||| ||| |  |||||||| |||||||||||||||    
T  10738873 tactctttttccttcactatatattttttttccattgggtttttctctaataaggttttaatgaggcacatccttcatggacattcaagggggagtgtta 10738972  T
Q  123 taaata 128  Q
    | ||||    
T  10738973 tgaata 10738978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 12756380 - 12756300
Alignment:
Q  60 ggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggat 140  Q
    |||||||||||||||||||||||||||| ||||||    ||||||||||||||||||||||||| |||||||  |||||||    
T  12756380 ggtttttctctagtaaggttttaatgagacatatccgagatggacatccaagggggagtgttatgaatattacaagtggat 12756300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 26197089 - 26196996
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattt 210  Q
    ||||||||||||||||||||||| || |||||||||||  |||  | | |||||||| |||||||||||||||||||||||||||  |||||||    
T  26197089 tgttataaatattaatagtggatgtccaaatagcaaataggtttataggccatactaataggttattgggcttagttcataagcttttctattt 26196996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 16845959 - 16845855
Alignment:
Q  18 atattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggag 117  Q
    ||||| |||||||||| |||||||| |||| || ||| |||   ||||||||||| |||||||||||||| ||||||||  ||||||||||||||  |||    
T  16845959 atattgtactcttttttcttcactataattattttcc-attgaatttttctctagaaaggttttaatgagacatatctttgatggacatccaaggaagag 16845861  T
Q  118 tgttat 123  Q
    ||||||    
T  16845860 tgttat 16845855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 8509666 - 8509778
Alignment:
Q  3 attatcatacacaagatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatgg 102  Q
    ||||| ||||| | ||| || |||||||||||||| |||| || |||| | | || ||||||||||||| ||| ||||||| ||||||||||||  ||||    
T  8509666 attatgatacaaaggatgttgtactctttttcctttactataactttttttc-atcaggtttttctctaataaagttttaacgaggcatatctttcatgg 8509764  T
Q  103 acatccaaggggga 116  Q
    ||||||||| ||||    
T  8509765 acatccaagaggga 8509778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 4e-72; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 23427381 - 23427627
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||| ||||| ||| |   ||||||  | ||||||||||||||||||||||||| || ||||||||||||||||||    
T  23427381 gatattgtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaaggggga 23427480  T
Q  117 gtgttataaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttctta 215  Q
    |||||||||||||||||| | ||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  23427481 gtgttataaatattaatatttgatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactctatttcccta 23427579  T
Q  216 taaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    ||||||||||||||||||||||||  |||||||||  |||| ||||||||||    
T  23427580 taaatagagctcatttgtaacatt--gatacacac--tagttaataagaata 23427627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 118 - 295
Target Start/End: Original strand, 18738573 - 18738749
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  18738573 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttacctat 18738672  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttc 295  Q
    |||||||||||||||||||||||  || | |||| | ||| |||||||||||| |||||||| ||| ||||||||||||    
T  18738673 aaatagagctcatttgtaacatt--gagagacacgtcagtaaataagaatactgctcctattttctcttcttctccttc 18738749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 118 - 291
Target Start/End: Complemental strand, 33661052 - 33660877
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || |||||||||||  |||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33661052 tgttataaatattaatagtggatgtccaaatagcaaataggtttatgggccatattactaggttattgggcttagttcataagctactctattttcttat 33660953  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcc-tattctctattcttctc 291  Q
    |||||||| |||||||||||||| ||||||||||||  ||||||||||||| | |||| |||||||| ||||||||    
T  33660952 aaatagagttcatttgtaacattgagatacacacatcggtgaataagaatatttctccttattctctcttcttctc 33660877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 23421636 - 23421781
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||| | ||| || ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||| | |||    
T  23421636 tgttataaatattaatatttgatgtccaaatagcaaatgtgttagtggactatactactaggtt-ttgggcttagttcataagttactctatttccctat 23421734  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaata 267  Q
    |||||||||||||||||||||||  |||||||||  |||| ||||||||||    
T  23421735 aaatagagctcatttgtaacatt--gatacacac--tagttaataagaata 23421781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 14855842 - 14855989
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||| |  ||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  14855842 tactctttttccttcattgaaatttttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 14855941  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccata 170  Q
     |||||||  ||||||| | || ||||||| || ||||||||| ||||    
T  14855942 gaatattacaagtggatgtccatatagcaattgggttattggatcata 14855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 19441382 - 19441313
Alignment:
Q  62 tttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaatatta 131  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  19441382 tttttctctagtaaggttttaatgaggcatatcatcaatggacatccaagggggagtgttatgaatatta 19441313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 17270442 - 17270338
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||| |||| ||||| ||| ||   |||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  17270442 tactctttttccttcattagattttttttcccatcgcgtttttctctagtaaggttttaatgaggcatatccttcatggacatccaagggggagtgttat 17270343  T
Q  124 aaata 128  Q
     ||||    
T  17270342 gaata 17270338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 6932946 - 6933107
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    ||||||||||| ||||||| ||||||| ||  ||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||| |  |||||||    
T  6932946 tactctttttcattcactataattttt-tctcattgggtttttatctagtaaggttttaatgaggcatatcttcgacggacatccaaggagctgtgttat 6933044  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgg 185  Q
     |||||||  ||||||| | || ||||||| || ||||||||  ||||||  ||| |||||||    
T  6933045 gaatattataagtggatgtccatatagcaattgggttattgggtcatactgttagcttattgg 6933107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 19816832 - 19816721
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| |||||||||||||| |||||||||||| | | | | | ||||| | ||||||||||||||| ||||||||| ||| ||||||||||| ||| |    
T  19816832 gatattgtactctttttccttaactagaattttttttc-actggctttttttttagtaaggttttaataaggcatatcctcagtggacatccaaagggta 19816734  T
Q  117 gtgttataaatat 129  Q
    |||||||||||||    
T  19816733 gtgttataaatat 19816721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 25397825 - 25397924
Alignment:
Q  27 tctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttataaa 126  Q
    |||||||||||||||||| ||||| ||| ||| | |||||| |||||||||||||||||||||||||| |  |||||||| |  ||||||||||||| ||    
T  25397825 tctttttccttcactagattttttttcc-attggatttttcactagtaaggttttaatgaggcatatccttgatggacattc--gggggagtgttatgaa 25397921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 57939 - 58122
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  57939 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactatattttcttat 58038  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |  ||||||| ||| |||||||||||||||||    
T  58039 aaatagagctcatttgtaacattgagatacacacattattgaataagaatattgttcctattatctcttcttctccttctctct 58122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 118 - 291
Target Start/End: Original strand, 9323 - 9496
Alignment:
Q  118 tgttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttat 216  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9323 tgttataaatattaatagtggatgtccaaatagcaaatgtattattgggccatactactaggttattgggcttagttcataagctactctattttcttat 9422  T
Q  217 aaatagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctc 291  Q
    |||||||||||||||||||||||  ||||||||||| | |||||||||||| | |||||||||||| ||||||||    
T  9423 aaatagagctcatttgtaacattgggatacacacatca-tgaataagaatatttctcctattctctcttcttctc 9496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 345924 - 345761
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  345924 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 345826  T
Q  124 aaatattaatagtggatat-caaatagcaaatgtgttattggaccatactactaggttattgggc 187  Q
     |||||||  ||||||| | || ||||||| || ||||||||| |||| |  ||| |||||||||    
T  345825 gaatattacaagtggatgtccatatagcaattgggttattggatcatattgttagcttattgggc 345761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 11493 - 11607
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggggga 116  Q
    |||||| ||||||||||||||||||||||||||| | | ||  | ||||||||||||| ||||||||||||||||||| || ||||||||||||| ||||    
T  11493 gatattgtactctttttccttcactagaattttttttccatcggatttttctctagtatggttttaatgaggcatatcctcgatggacatccaagaggga 11592  T
Q  117 gtgttataaatatta 131  Q
    ||||||| |||||||    
T  11593 gtgttatgaatatta 11607  T

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Target: scaffold0124 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 39349 - 39463
Alignment:
Q  24 tactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 123  Q
    |||||||||||||||||| |||||||| ||| | | ||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  39349 tactctttttccttcactggaattttt-tcccactgggtttttctctagtaaggttttaatgaggcatatcctcgatggacat-caagggggagtgttat 39446  T
Q  124 aaatattaatagtggat 140  Q
     |||||||  |||||||    
T  39447 gaatattataagtggat 39463  T

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Target: scaffold0258 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 6435 - 6256
Alignment:
Q  120 ttataaatattaatagtggatatc-aaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactctattttcttataa 218  Q
    ||||||||||||| ||||||| || |||||||||||   ||  ||| | |||| | |||||||||||||||||||||||||||||||||||| | | |||    
T  6435 ttataaatattaacagtggatgtccaaatagcaaataaatttatgggctatacgaataggttattgggcttagttcataagctactctatttccctgtaa 6336  T
Q  219 atagagctcatttgtaacattaagatacacacattagtgaataagaatactactcctattctctattcttctccttctctct 300  Q
    ||||| |||| |||||||| |  ||   |  ||| |||||||||||||| | |||||||||||| |||||||||||||||||    
T  6335 atagaactcaattgtaacagt--gagtgatgcatcagtgaataagaatattgctcctattctctcttcttctccttctctct 6256  T

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Target: scaffold0081 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 7664 - 7759
Alignment:
Q  17 gatattatactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaaggg 113  Q
    |||||| |||||||||||||||||||  |||||| |||  | || ||||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  7664 gatattgtactctttttccttcactaagatttttttccattgagttttttct-tagtaaggttttaatgaggcatatccttaatgaacatccaaggg 7759  T

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Target: scaffold0062 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 19754 - 19820
Alignment:
Q  61 gtttttctctagtaaggttttaatgaggcatatcttca-atggacatccaagggggagtgttataaata 128  Q
    |||||||| |||||||||||||||||||||||||  || |||||||||||||||| |||||||| ||||    
T  19754 gtttttctatagtaaggttttaatgaggcatatc--cagatggacatccaaggggaagtgttatgaata 19820  T

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Target: scaffold0062; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 29922 - 29988
Alignment:
Q  61 gtttttctctagtaaggttttaatgaggcatatcttca-atggacatccaagggggagtgttataaata 128  Q
    |||||||| |||||||||||||||||||||||||  || |||||||||||||||| |||||||| ||||    
T  29922 gtttttctatagtaaggttttaatgaggcatatc--cagatggacatccaaggggaagtgttatgaata 29988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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