View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13329_low_7 (Length: 237)
Name: NF13329_low_7
Description: NF13329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13329_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 5634739 - 5634943
Alignment:
| Q |
14 |
aacaatatgtattaataaaaatttaagatttaaattgaaaagaaacgacgactaaaaactcatttcacatgtcgattttgtatcgatgagttgtttcaat |
113 |
Q |
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| T |
5634739 |
aacaatatgtattaataaaaatttaagacctaaattgaaaagaaacgaccactaaaaactcattccatatgtcgattttgtaacgatgagttgtttcaat |
5634838 |
T |
|
| Q |
114 |
ataaaacttgtaaccagnnnnnnnncaaatgatataagcatttcatattttcctagttttctctcctatacacacttgtatatcacaaacaatgaccgcc |
213 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5634839 |
ataaaacttgtaaccagttttttttcaaatgatataagcatttcatattttcctagttttctctcctatacacacttgtatatcacaaacaatgaccgcc |
5634938 |
T |
|
| Q |
214 |
ggcag |
218 |
Q |
| |
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||||| |
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| T |
5634939 |
ggcag |
5634943 |
T |
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