View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1332_low_18 (Length: 334)
Name: NF1332_low_18
Description: NF1332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1332_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 3 - 306
Target Start/End: Complemental strand, 26274431 - 26274128
Alignment:
| Q |
3 |
ttatttttatcatcatatagtacatgctttgtattaattaactagttcaagtctcttaattttgtacattaatttatttgttaagcaacaaattaaaatg |
102 |
Q |
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| T |
26274431 |
ttatttttatcatcatatagtacatgctttgtattaattaactagttcaagtctcttaattttgtacattaatttatttgttaagaaacaaattaaaatg |
26274332 |
T |
|
| Q |
103 |
cacatttatttagtatggactagcatagacgttatgtaaacaaaagactttagaatttcgaagttaatactatatatttgtgagcacgttatattagaat |
202 |
Q |
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| T |
26274331 |
cacatttatttagtatggactagcatagacgttatgtaaacaaaagactttagaatttcgaagttaatactatatatttgtgagcacgttatattagaat |
26274232 |
T |
|
| Q |
203 |
atctttggaatatacttgtagaaaaaattacagaataaaagaaggccagtgttgagacaacaagtgtcatttttaattaaaatatatatatttatattgt |
302 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
26274231 |
atctttggaatatacttgtagaagaaattacagaataaaagaaggccagtgttgagacaacaagtgtcatttttaattaaaatatatgtatttatattgt |
26274132 |
T |
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| Q |
303 |
ttat |
306 |
Q |
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|||| |
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| T |
26274131 |
ttat |
26274128 |
T |
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